Pregenerated sensors for NBPF15 (Homo sapiens)
Ensembl gene IDs: ENSG00000266338Ensembl transcript IDs: ENST00000488031.6, ENST00000577412.5, ENST00000581897.6
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAATGTTTAGGCTGAATTTAATCATGAAG | + |
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Preference number: 1 (lower is better) Translates to: SARRWAEVGNSQHCL*SVPGKMFRLNLIMK Trigger: CTTCATGATTAAATTCAGCCTAAACATTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| 3UTR-3UTR GCA 90 bp | CCTGATATCATAATGGTGATGGACAAACTAGACCTTCTCTGCCCGCAGATGGGCTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: PDIIMVMDKLDLLCPQMGSQHCL*SVPGKM Trigger: CATTTTGCCGGGAACACTGCAGAGACAATGCTGTGA...GCCCATCTGCGGGCAGAGAAGGTCTAGTTTGTCCATCACCATTATGATATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| 3UTR-3UTR GCA 90 bp | AACCGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: NRFPKYFIISKVSLKGTDSQHCL*SVPGKM Trigger: CATTTTGCCGGGAACACTGCAGAGACAATGCTGTGA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| 3UTR GCA 72 bp | AGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAATGTTTAGGCTGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: RWAEVGNSQHCL*SVPGKMFRLNL Trigger: TAAATTCAGCCTAAACATTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| CDS-3UTR CCA 90 bp | TTCTCTGCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGCACGCCGTAGAGCCTaGGGCATGGTGGGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FSARRWAEVGNSQHCLCSARRRA*GMVGCH Trigger: ATGACAACCCACCATGCCCCAGGCTCTACGGCGTGC...ACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| CDS-3UTR CCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAAGCACGCCGTAGAGCCTaGGGCATGGTGGGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKARRRA*GMVGCH Trigger: ATGACAACCCACCATGCCCCAGGCTCTACGGCGTGC...TTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| CDS-3UTR TCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAAGACGCTAGGCCTGCTTaGTCCATAGGCTCACATTTG | + |
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Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKDARPA*SIGSHL Trigger: CAAATGTGAGCCTATGGATCAAGCAGGCCTAGCGTC...TTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577412.5 |
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| CDS-3UTR GCA 90 bp | TTCTCTGCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTTCACAGCATTGTCTCTaGAGTGTTCCCGGCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: FSARRWAEVGNSQHCLCSSQHCL*SVPGKM Trigger: CATTTTGCCGGGAACACTGCAGAGACAATGCTGTGA...ACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| CDS-3UTR GCA 90 bp | CCTGATATCATAATGGTGATGGACAAACTAGACCTTCTCTGCCCGCAGATGGGCCATCTAAACAGGATTTaGTTTCAGATTGCCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PDIIMVMDKLDLLCPQMGHLNRI*FQIAAR Trigger: GCGGGCGGCAATCTGAAAGCAAATCCTGTTTAGATG...GCCCATCTGCGGGCAGAGAAGGTCTAGTTTGTCCATCACCATTATGATATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488031.6 |
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| CDS-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGCAAAATTGCACTCTTCATATTaGTATTTCTTCTGTCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: DGLRLETHSIVSAVFPAKLHSSY*YFFCRL Trigger: CAACCGACAGAAGAAATACAAATATGAAGAGTGCAA...TTTTGCCGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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| CDS-3UTR CAA 90 bp | AACCGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATGCATCTAAACAGGATTaGCTTTCAGATTGCCGCCCG | + |
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Preference number: 5 (lower is better) Translates to: NRFPKYFIISKVSLKGTDASKQD*LSDCRP Trigger: CGGGCGGCAATCTGAAAGCAAATCCTGTTTAGATGC...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488031.6 |
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| CDS-3UTR CAA 90 bp | AACCGCTTTCCCAAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATTTGCACTCTTCATATTaGTATTTCTTCTGTCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: NRFPKYFIISKVSLKGTDLHSSY*YFFCRL Trigger: CAACCGACAGAAGAAATACAAATATGAAGAGTGCAA...ATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTTGGGAAAGCGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488031.6 ENST00000577412.5 ENST00000581897.6 |
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