Pregenerated sensors for NBPF12 (Homo sapiens)
Ensembl gene IDs: ENSG00000268043Ensembl transcript IDs: ENST00000579935.8, ENST00000611443.4, ENST00000617614.4, ENST00000617844.4, ENST00000617931.4
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAACAGAATGTAGATCATTaGGCCAGAGAGCTGACCTGT | + |
|
Preference number: 2 (lower is better) Translates to: DGLRLETHSIVSAVFPAKQNVDH*ARELTC Trigger: ACAGGTCAGCTCTCTGGCTCAATGATCTACATTCTG...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| 3UTR-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAATCAGAATGTAGATCATaGAGCCAGAGAGCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: DGLRLETHSIVSAVFPAKSECRS*SQRADL Trigger: CAGGTCAGCTCTCTGGCTCAATGATCTACATTCTGA...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR TCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAACCATCAGCACGCTGTTaGGCCTGGGGCATGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKPSARC*AWGMVG Trigger: ACCCACCATGCCCCAGGCTCAACAGCGTGCTGATGG...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| 3UTR CAA 72 bp | CAAACTAGACCTTCTCTGCCCGCAGATGGGCTGAGGTaGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTRPSLPADGLR*ETHSIVSAVFP Trigger: TGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAAGGTCTAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR GCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAAGATTTGCCTTCAGAATaGCTCCGGAACGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKDLPSE*LRNAGW Trigger: CCACCCAGCGTTCCGGAGGCATTCTGAAGGCAAATC...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617931.4 |
||
| CDS-3UTR CCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAACCTTCTGCATCTCCCTaGGGGAAGATGATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKPSASP*GKMIPA Trigger: TGCTGGAATCATCTTCCCCCAGGGAGATGCAGAAGG...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000611443.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR GCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAACTTTCTTCAGCCTTCTaGATCTCCCTGGGGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKLSSAF*ISLGED Trigger: ATCTTCCCCCAGGGAGATGCAGAAGGCTGAAGAAAG...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000611443.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR TCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAACATCATTTTCTGGGCTaGGCTTTTGGACAAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKHHFLG*AFGQVA Trigger: AGCAACTTGTCCAAAAGCTCAGCCCAGAAAATGATG...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR TCA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAAGTTTGCTCATTTTCTTaGTCCATAGGCTCACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLETHSIVSAVFPAKVCSFS*SIGSHL Trigger: CAAATGTGAGCCTATGGATCAAGAAAATGAGCAAAC...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617931.4 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAAGGGTCTAAACAGGATTaGCCTTCAGAATGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DGLRLETHSIVSAVFPAKGSKQD*PSECLR Trigger: CCGGAGGCATTCTGAAGGCAAATCCTGTTTAGACCC...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617931.4 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAATGGAAACTCACAGCATaGTCTCTGCAGTGTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGLRLETHSIVSAVFPAKWKLTA*SLQCSQ Trigger: CTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCA...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAATATCTTCAAGGGCTGTaGGATCTGGCAGCTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DGLRLETHSIVSAVFPAKYLQGL*DLAALH Trigger: ATGAAGAGCTGCCAGATCCAACAGCCCTTGAAGATA...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617931.4 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAATTGCACTCTTCATATTaGTATTTGTTCTGCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGLRLETHSIVSAVFPAKLHSSY*YLFCCL Trigger: CAAGCAGCAGAACAAATACAAATATGAAGAGTGCAA...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000579935.8 ENST00000611443.4 ENST00000617614.4 ENST00000617844.4 ENST00000617931.4 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCAGCAAAATGTTTGCTCATTTTCTaGATCCATAGGCTCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLRLETHSIVSAVFPAKCLLIF*IHRLTF Trigger: AAATGTGAGCCTATGGATCAAGAAAATGAGCAAACA...TTTTGCTGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617931.4 |
||