Pregenerated sensors for NBPF11 (Homo sapiens)
Ensembl gene IDs: ENSG00000263956Ensembl transcript IDs: ENST00000613531.1, ENST00000614015.4, ENST00000614506.4, ENST00000614785.4, ENST00000615281.4
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTaGAGTGTTCCCGTCAAAAAGTTTAGGCTGAATTTAATTATGAAG | + |
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Preference number: 1 (lower is better) Translates to: SARRWAEVGNSQHCL*SVPVKKFRLNLIMK Trigger: CTTCATAATTAAATTCAGCCTAAACTTTTTGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGCCAGCAGCTCCCTGCTaGGCCTGGGGCACGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMPAAPC*AWGTVG Trigger: GCCCACCGTGCCCCAGGCTCAGCAGGGAGCTGCTGG...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614506.4 |
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| 3UTR-3UTR GCA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCTCACAGCATTGTCTCTaGAGTGTTCCCGTCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPSQHCL*SVPVKK Trigger: CTTTTTGACGGGAACACTGCAGAGACAATGCTGTGA...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR-3UTR GCA 90 bp | AAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCTCCTAGACCCCTCACAGCATTGTCTCTaGAGTGTTCCCGTCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: KYFIISKVSLKGTDLLDPSQHCL*SVPVKK Trigger: CTTTTTGACGGGAACACTGCAGAGACAATGCTGTGA...GGGGTCTAGGAGATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR-3UTR CAA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCTGGAAACTCACAGCATaGTCTCTGCAGTGTTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPWKLTA*SLQCSR Trigger: ACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCA...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR-3UTR CAA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCATGGAAACTCACAGCATaGTCTCTGCAGTGTTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: ADGLRLETHSIVSAVFPSWKLTA*SLQCSR Trigger: ACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCA...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR TCA 72 bp | TTGGACAAACTAGACCTTCTCTGCCCGCAGATGGGCTaGGGTTGGAAACTCACAGCATTGTCTCTGCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LDKLDLLCPQMG*GWKLTALSLQC Trigger: ACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGTGGAAACTCACAGCATaGTCTCTGCAGTGTTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMWKLTA*SLQCSR Trigger: ACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCA...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR GCA 72 bp | AGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTaGAGTGTTCCCGTCAAAAAGTTTAGGCTGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: RWAEVGNSQHCL*SVPVKKFRLNL Trigger: TAAATTCAGCCTAAACTTTTTGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR TCA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCCCAGCAGCTCCCTGCTaGGCCTGGGGCACGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPPAAPC*AWGTVG Trigger: GCCCACCGTGCCCCAGGCTCAGCAGGGAGCTGCTGG...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR TCA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCACCAGCAGCTCCCTGCTaGGCCTGGGGCACGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ADGLRLETHSIVSAVFPSPAAPC*AWGTVG Trigger: GCCCACCGTGCCCCAGGCTCAGCAGGGAGCTGCTGG...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCCCTTCTGCACCTCCCTaGGGGCAGATGATTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPPSAPP*GQMIPV Trigger: TACTGGAATCATCTGCCCCCAGGGAGGTGCAGAAGG...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR TCA 90 bp | AAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCTCCTAGACCCCCCAGCAGCTCCCTGCTaGGCCTGGGGCACGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KYFIISKVSLKGTDLLDPPAAPC*AWGTVG Trigger: GCCCACCGTGCCCCAGGCTCAGCAGGGAGCTGCTGG...GGGGTCTAGGAGATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCACCTTCTGCACCTCCCTaGGGGCAGATGATTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: ADGLRLETHSIVSAVFPSPSAPP*GQMIPV Trigger: TACTGGAATCATCTGCCCCCAGGGAGGTGCAGAAGG...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCACTCCTGCAGATTCCTaGGAGACACTGGCCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPTPADS*ETLALF Trigger: AAAAAGGGCCAGTGTCTCCCAGGAATCTGCAGGAGT...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| 3UTR CAA 72 bp | CAAACTAGACCTTCTCTGCCCGCAGATGGGCTGAGGTaGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QTRPSLPADGLR*ETHSIVSAVFP Trigger: CGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGCAGAGAAGGTCTAGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGGATTTGCCTTCAGAATaGCTCCCGCCCGGCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMDLPSE*LPPGLA Trigger: CGCCAGGCCGGGCGGGAGGCATTCTGAAGGCAAATC...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCACCTTCTGCATCTCCCTaGGGGAAGACGATTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ADGLRLETHSIVSAVFPSPSASP*GKTISA Trigger: TGCAGAAATCGTCTTCCCCCAGGGAGATGCAGAAGG...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCAACTCCTGCAGATTCCTaGGAGACACTGGCCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: ADGLRLETHSIVSAVFPSTPADS*ETLALF Trigger: AAAAAGGGCCAGTGTCTCCCAGGAATCTGCAGGAGT...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCCAATCACATTTCTGTTaGATCTGGCAGCTCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPQSHFC*IWQLFM Trigger: CATGAAGAGCTGCCAGATCCAACAGAAATGTGATTG...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCAATCTTCAAGGGCTGTTaGATCTGGCAGCTCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: ADGLRLETHSIVSAVFPSIFKGC*IWQLFM Trigger: CATGAAGAGCTGCCAGATCCAACAGCCCTTGAAGAT...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614506.4 |
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| CDS-3UTR GCA 90 bp | GCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGTCATCACAGCATTGTCTCTaGAGTGTTCCCGTCAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: ADGLRLETHSIVSAVFPSSQHCL*SVPVKK Trigger: CTTTTTGACGGGAACACTGCAGAGACAATGCTGTGA...TGACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGCCTTCTGCACCTCCCTaGGGGCAGATGATTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMPSAPP*GQMIPV Trigger: TACTGGAATCATCTGCCCCCAGGGAGGTGCAGAAGG...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCATCGTTATCATTTTCTaGGCTGAGCTTTTGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPIVIIF*AELLDK Trigger: CTTGTCCAAAAGCTCAGCCCAGAAAATGATAACGAT...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGACTCCTGCAGATTCCTaGGAGACACTGGCCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMTPADS*ETLALF Trigger: AAAAAGGGCCAGTGTCTCCCAGGAATCTGCAGGAGT...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGTTCCTCTGTCCAATCTaGCTATGTCAACAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMFLCPI*LCQQPC Trigger: GCATGGCTGTTGACATAGGCAGATTGGACAGAGGAA...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614506.4 |
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| 3UTR CAA 72 bp | CTTAACCAAGTAACCAGTCCTGATATCATAATGGTGTaGGACAAACTAGACCTTCTCTGCCCGCAGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: LNQVTSPDIIMV*DKLDLLCPQMG Trigger: GCCCATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACTGGTTACTTGGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGTCACAGCATTGTCTCTaGAGTGTTCCCGTCAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMSQHCL*SVPVKK Trigger: CTTTTTGACGGGAACACTGCAGAGACAATGCTGTGA...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | AAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCTCCTAGACCCCCCTTCTGCATCTCCCTaGGGGAAGACGATTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KYFIISKVSLKGTDLLDPPSASP*GKTISA Trigger: TGCAGAAATCGTCTTCCCCCAGGGAGATGCAGAAGG...GGGGTCTAGGAGATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CCA 90 bp | AAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCTCCTAGACCCCATCGTTATCATTTTCTaGGCTGAGCTTTTGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: KYFIISKVSLKGTDLLDPIVIIF*AELLDK Trigger: CTTGTCCAAAAGCTCAGCCCAGAAAATGATAACGAT...GGGGTCTAGGAGATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS-3UTR CAA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCGGGTCTAAACAGGATTaGCCTTCAGAATGCCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPGSKQD*PSECLP Trigger: CGGGAGGCATTCTGAAGGCAAATCCTGTTTAGACCC...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615281.4 |
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| CDS-3UTR CAA 90 bp | GCCCGCAGATGGGCTGAGGTTGGAAACTCACAGCATTGTCTCTGCAGTGTTCCCTCAATCACATTTCTGTaGGATCTGGCAGCTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: ARRWAEVGNSQHCLCSVPSITFL*DLAALH Trigger: ATGAAGAGCTGCCAGATCCAACAGAAATGTGATTGA...GGGAACACTGCAGAGACAATGCTGTGAGTTTCCAACCTCAGCCCATCTGCGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615281.4 |
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| CDS-3UTR CAA 90 bp | AGTCCTGATATCATAATGGTGTTGGACAAACTAGACCTTCTCTGCCCGCAGATGGGTGGAGTCAGGGACTaGATCCATAGGCTCACATTT | + |
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Preference number: 5 (lower is better) Translates to: SPDIIMVLDKLDLLCPQMGGVRD*IHRLTF Trigger: AAATGTGAGCCTATGGATCAAGTCCCTGACTCCACC...CATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTATGATATCAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615281.4 |
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| CDS-3UTR CAA 90 bp | AAGTACTTCATTATAAGTAAGGTGTCTCTAAAAGGGACAGATCTCCTAGACCCCTGGAAACTCACAGCATaGTCTCTGCAGTGTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: KYFIISKVSLKGTDLLDPWKLTA*SLQCSR Trigger: ACGGGAACACTGCAGAGACAATGCTGTGAGTTTCCA...GGGGTCTAGGAGATCTGTCCCTTTTAGAGACACCTTACTTATAATGAAGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000614015.4 ENST00000614506.4 ENST00000614785.4 ENST00000615281.4 |
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| CDS TCA 72 bp | GTGCCAGGTAACCGTCTCCAAATGTTCCTCTGGCTCTaGTATTCTGTGACTCTGGTTTCTTTTTGGCTACTT | + |
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Preference number: 6 (lower is better) Translates to: VPGNRLQMFLWL*YSVTLVSFWLL Trigger: AAGTAGCCAAAAAGAAACCAGAGTCACAGAATATCAGAGCCAGAGGAACATTTGGAGACGGTTACCTGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000613531.1 |
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