RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NBN (Homo sapiens)

Ensembl gene IDs: ENSG00000104320

Ensembl transcript IDs: ENST00000265433.8, ENST00000396252.6, ENST00000409330.5, ENST00000474821.1, ENST00000494804.1, ENST00000523444.1, ENST00000613033.1

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGTTATTGTCTGAGTTTGTGTCCACAGGCTCATTCTCAGATAGATaGTGCTCCTTATTTTTCCACAATGAGGGTGTAGCAGGTTGTGTT +
Preference number: 1 (lower is better)
Translates to: KLLSEFVSTGSFSDR*CSLFFHNEGVAGCV
Trigger: AACACAACCTGCTACACCCTCATTGTGGAAAAATAAGGAGCAGCATCTATCTGAGAATGAGCCTGTGGACACAAACTCAGACAATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR TCA 90 bp TTAAGGAGCATCTATGCAGCTACAGTAATTCAAGGCAGTATGGTATaGGTGAGTGCAAGGATGGACAAACATTTCAGTGTAACCAAACAG +
Preference number: 1 (lower is better)
Translates to: LRSIYAATVIQGSMV*VSARMDKHFSVTKQ
Trigger: CTGTTTGGTTACACTGAAATGTTTGTCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAGATGCTCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
3UTR GCA 90 bp CATCTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTaGAAGGATGGACAAACATTTCAGTGTAACCAAACAGAAAGTCCA +
Preference number: 1 (lower is better)
Translates to: HLCSYSNSRQYGMSE*KDGQTFQCNQTESP
Trigger: TGGACTTTCTGTTTGGTTACACTGAAATGTTTGTCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
3UTR GCA 90 bp ACAGTAATTCTTTGTAGTCATGAAAATCACCGCCAATCCAATTTCTaGTTCAGGAATAGGTCTAAGACCTTGCCTTTGGAGCATATCCAT +
Preference number: 1 (lower is better)
Translates to: TVILCSHENHRQSNF*FRNRSKTLPLEHIH
Trigger: ATGGATATGCTCCAAAGGCAAGGTCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTACAAAGAATTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR TCA 90 bp AACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGGGCATaGCAGAGAACAATATTAATCTGTCCATTATATTCCTTAACTGTA +
Preference number: 1 (lower is better)
Translates to: NCYSRAVFLRKGLWA*QRTILICPLYSLTV
Trigger: TACAGTTAAGGAATATAATGGACAGATTAATATTGTTCTCTGTCATGCCCACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR GCA 90 bp ATTCTCTTCTGTTATCAACCTAGCTTCCCCACCTCCAAAGACAACTaGGGAACTCAATTTCTTATGCTGTTTGGCATTCAAAAATATAAA +
Preference number: 1 (lower is better)
Translates to: ILFCYQPSFPTSKDN*GTQFLMLFGIQKYK
Trigger: TTTATATTTTTGAATGCCAAACAGCATAAGAAATTGAGTTCCGCAGTTGTCTTTGGAGGTGGGGAAGCTAGGTTGATAACAGAAGAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR CCA 90 bp CTGCTTCTTGGACTCAACTGCTTTCAGGAATTCAGTAAAATATTCTaGCTTTACAATTGGACGTCCACAAATGAGTGCACATATTGTTTT +
Preference number: 1 (lower is better)
Translates to: LLLGLNCFQEFSKIF*LYNWTSTNECTYCF
Trigger: AAAACAATATGTGCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAATATTTTACTGAATTCCTGAAAGCAGTTGAGTCCAAGAAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR TCA 90 bp GCACATATTGTTTTAATGGTAACTTTCACTGATACCATGACAAGGTaGGTGCATTCTTCTGTCCAATTGTTTACAGTAAATCCTCCAAGT +
Preference number: 1 (lower is better)
Translates to: AHIVLMVTFTDTMTR*VHSSVQLFTVNPPS
Trigger: ACTTGGAGGATTTACTGTAAACAATTGGACAGAAGAATGCACTCACCTTGTCATGGTATCAGTGAAAGTTACCATTAAAACAATATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396252.6
ENST00000523444.1
3UTR-3UTR TCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGAGTTGTAGTGACTCTTaGCTGGAACTCCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: DALPQDLEGESDVEASLLSCSDS*LELPSC
Trigger: GCAAGAAGGGAGTTCCAGTCAAGAGTCACTACAACT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR CAA 90 bp CGCTTGGCATTAGTTTTTCATCAACTGACACGCCTTGTGAAAGGCTaGGTCCTGGAGTTGTTGTCTTTAATCCTGTACTGGGATGGCCCT +
Preference number: 2 (lower is better)
Translates to: RLALVFHQLTRLVKG*VLELLSLILYWDGP
Trigger: AGGGCCATCCCAGTACAGGATTAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAAAACTAATGCCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGTCCCATGTATCTGCTTaGTCTGATTCTGTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: DALPQDLEGESDVEASLLSHVSA*SDSVSA
Trigger: AGCTGACACAGAATCAGAGCAAGCAGATACATGGGA...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR CAA 90 bp CTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTaGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATA +
Preference number: 2 (lower is better)
Translates to: LPQDLEGESDVEASL*SLLLLLFTREVMEI
Trigger: TATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTGTAGTGACTCTTGACTaGAACTCCCTTCTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: VPSVASVYKGSHGNMASIVVTLD*NSLLAG
Trigger: TCCAGCAAGAAGGGAGTTCCAGTCAAGAGTCACTAC...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCCTAAGACCTTGCCTTTaGAGCATATCCATTATTGAC +
Preference number: 2 (lower is better)
Translates to: DVEASLLSLLLLLFTREVLRPCL*SISIID
Trigger: GTCAATAATGGATATGCTCCAAAGGCAAGGTCTTAG...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTTTACAAGGGAAGTCATaGAAATATGGCCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLLQGKS*KYGLHS
Trigger: GGAATGGAGGCCATATTTCCATGACTTCCCTTGTAA...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR TCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTATAACCTTGTTGGCCTaGAGTAGATGCTTACTAGGA +
Preference number: 2 (lower is better)
Translates to: VPSVASVYKGSHGNMASIITLLA*SRCLLG
Trigger: TCCTAGTAAGCATCTACTTCAGGCCAACAAGGTTAT...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTGATACCATGACAAGGTaGGTGCATTCTTCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIDTMTR*VHSSVQ
Trigger: TTGGACAGAAGAATGCACTCACCTTGTCATGGTATC...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTGATGAAGTCTCCACATaGTCTTCAGTTTCTAGTACT +
Preference number: 2 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLDEVST*SSVSST
Trigger: AGTACTAGAAACTGAAGACCATGTGGAGACTTCATC...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTGAAGTCATGGAAATATaGCCTCCATTCCTCACTGTT +
Preference number: 2 (lower is better)
Translates to: VASVYKGSHGNMASIPHCEVMEI*PPFLTV
Trigger: AACAGTGAGGAATGGAGGCCATATTTCCATGACTTC...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTATTACAAGGGAAGTCATaGAAATATGGCCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: STCKQPELGSKLIWFWQVLQGKS*KYGLHS
Trigger: GGAATGGAGGCCATATTTCCATGACTTCCCTTGTAA...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTTCTGGCTTTACAATTaGACGTCCACAAATGAGTGC +
Preference number: 2 (lower is better)
Translates to: VPSVASVYKGSHGNMASIFWLYN*TSTNEC
Trigger: GCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGAAATGGTAACTTTCACTaGTACCATGACAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGNGNFH*YHDKVS
Trigger: ACTCACCTTGTCATGGTATCAGTGAAAGTTACCATT...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTAACCTCCAAAGACAACTaGGGAACTCAATTTCTTATG +
Preference number: 2 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLTSKDN*GTQFLM
Trigger: CATAAGAAATTGAGTTCCGCAGTTGTCTTTGGAGGT...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGAAGTCTCCACATaGTCTTCAGTTTCTAGTACT +
Preference number: 2 (lower is better)
Translates to: STCKQPELGSKLIWFWQVDEVST*SSVSST
Trigger: AGTACTAGAAACTGAAGACCATGTGGAGACTTCATC...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTCAGTGTTACAATGACTaGATACTTGTATGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: VASVYKGSHGNMASIPHCQCYND*ILVWGK
Trigger: TTTCCCCCATACAAGTATCCAGTCATTGTAACACTG...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR TCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTGCTCATACTCTATTCTaGATTTACTTCCAAACACTC +
Preference number: 2 (lower is better)
Translates to: VASVYKGSHGNMASIPHCAHTLF*IYFQTL
Trigger: GAGTGTTTGGAAGTAAATTCAGAATAGAGTATGAGC...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTAGTTGTAGTGACTCTTaGCTGGAACTCCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCSCSDS*LELPSC
Trigger: GCAAGAAGGGAGTTCCAGTCAAGAGTCACTACAACT...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTTCTCAGATAGATGCTaGTCCTTATTTTTCCACAAT +
Preference number: 2 (lower is better)
Translates to: VASVYKGSHGNMASIPHCFSDRC*SLFFHN
Trigger: ATTGTGGAAAAATAAGGAGCAGCATCTATCTGAGAA...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGTAGTGACTCTTGACTaGAACTCCCTTCTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCVVTLD*NSLLAG
Trigger: TCCAGCAAGAAGGGAGTTCCAGTCAAGAGTCACTAC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGAATCATTTATGCCAGATaGATTTCTGGAAGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGIIYAR*ISGSRV
Trigger: AACTCTACTTCCAGAAATCCATCTGGCATAAATGAT...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTCTTTCACTGATACCATaGCAAGGTGAGTGCATTCTT +
Preference number: 2 (lower is better)
Translates to: SIIFLNCKMETICSTSFTLSLIP*QGECIL
Trigger: AAGAATGCACTCACCTTGTCATGGTATCAGTGAAAG...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTCTTGTCCCTTCTGTTaGTTCTGTTTACAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: SIIFLNCKMETICSTSFTSCPFC*FCLQGK
Trigger: CTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGAGCCTGTAGTAGAAATTaGAGATTGGCTCACCCAATT +
Preference number: 2 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRACSRN*RLAHPI
Trigger: AATTGGGTGAGCCAATCTGCAATTTCTACTACAGGC...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTCAATTTGTGGAGGCTaGTTCTTGGACTCAACTGCT +
Preference number: 2 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVSICGG*FLDSTA
Trigger: AGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTGAAGTCATGGAAATATaGCCTCCATTCCTCACTGTT +
Preference number: 2 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPAEVMEI*PPFLTV
Trigger: AACAGTGAGGAATGGAGGCCATATTTCCATGACTTC...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATCAGTGTTACAATGACTaGATACTTGTATGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDQCYND*ILVWGK
Trigger: TTTCCCCCATACAAGTATCCAGTCATTGTAACACTG...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR TCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTATAACCTTGTTGGCCTaGAGTAGATGCTTACTAGGA +
Preference number: 2 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVITLLA*SRCLLG
Trigger: TCCTAGTAAGCATCTACTTCAGGCCAACAAGGTTAT...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTCTTTCCTGCCGTCCTaGCAGATCAACATTTTTACT +
Preference number: 2 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHSFLPS*QINIFT
Trigger: AGTAAAAATGTTGATCTGTCAGGACGGCAGGAAAGA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATGAGCATATCCATTATTaGCTGAATCCATTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDEHIHY*LNPFLL
Trigger: CAGAAGAAATGGATTCAGTCAATAATGGATATGCTC...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTAGTGGGTGCATCTTGTaGAAGCATTCTGAATTTTTG +
Preference number: 2 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPASGCIL*KHSEFL
Trigger: CAAAAATTCAGAATGCTTTCACAAGATGCACCCACT...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATGGCAATTTAGTTGGTaGAAGCTGATAGTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLWQFSW*KLIVWD
Trigger: ATCCCAAACTATCAGCTTTCACCAACTAAATTGCCA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATCGCCAATCCAATTTCTaGTTCAGGAATAGGTCTAAG +
Preference number: 2 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHRQSNF*FRNRSK
Trigger: CTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCG...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTCATTCTCAGATAGATaGTGCTCCTTATTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDSFSDR*CSLFFH
Trigger: GTGGAAAAATAAGGAGCAGCATCTATCTGAGAATGA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTAGATGAAGTCTCCACATaGTCTTCAGTTTCTAGTACT +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLDEVST*SSVSST
Trigger: AGTACTAGAAACTGAAGACCATGTGGAGACTTCATC...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTGAAGTCATGGAAATATaGCCTCCATTCCTCACTGTT +
Preference number: 2 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVEVMEI*PPFLTV
Trigger: AACAGTGAGGAATGGAGGCCATATTTCCATGACTTC...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTTACAAGGGAAGTCATaGAAATATGGCCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHLQGKS*KYGLHS
Trigger: GGAATGGAGGCCATATTTCCATGACTTCCCTTGTAA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTACAGTGTTACAATGACTaGATACTTGTATGGGGGAAA +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLQCYND*ILVWGK
Trigger: TTTCCCCCATACAAGTATCCAGTCATTGTAACACTG...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR CAA 90 bp TTAGCCAAAGTATTTGATACCATACTATTATTATTAGAGCTTGTTTaGCAGGACTCCTTTACAGTGGGTGCATCTTGTGAAAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: LAKVFDTILLLLELV*QDSFTVGASCESIL
Trigger: CAGAATGCTTTCACAAGATGCACCCACTGTAAAGGAGTCCTGCAAAACAAGCTCTAATAATAATAGTATGGTATCAAATACTTTGGCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATAAGGGATTGTGGGCATaGCAGAGAACAATATTAATC +
Preference number: 2 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHKGLWA*QRTILI
Trigger: GATTAATATTGTTCTCTGTCATGCCCACAATCCCTT...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATCAAGGTGTAGAACACTaGATATGTTATGCTATCATT +
Preference number: 2 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDQGVEH*ICYAII
Trigger: AATGATAGCATAACATATGCAGTGTTCTACACCTTG...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGACTTCTTGGACTCAACTaGTTTCAGGAATTCAGTAAA +
Preference number: 2 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRLLGLN*FQEFSK
Trigger: TTTACTGAATTCCTGAAAGCAGTTGAGTCCAAGAAG...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTAAAGTTAATTTGGTTCTaGCAAGTAGATGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLKLIWF*QVDALP
Trigger: TGGAAGTGCATCTACTTGCCAGAACCAAATTAACTT...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATTTACTTCCAATAGATaGTTCATCAAGAGGTGGGTA +
Preference number: 2 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRFTSNR*FIKRWV
Trigger: TACCCACCTCTTGATGAACCATCTATTGGAAGTAAA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTCAAGGTGTAGAACACTaGATATGTTATGCTATCATT +
Preference number: 2 (lower is better)
Translates to: SIIFLNCKMETICSTSFTQGVEH*ICYAII
Trigger: AATGATAGCATAACATATGCAGTGTTCTACACCTTG...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTACAAGGTGTAGAACACTaGATATGTTATGCTATCATT +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLQGVEH*ICYAII
Trigger: AATGATAGCATAACATATGCAGTGTTCTACACCTTG...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR GCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTGACAAATATAAAAACTaGTATAGTAGGGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: SIIFLNCKMETICSTSFTDKYKN*YSRAVF
Trigger: GAAGACTGCCCTACTATAGCAGTTTTTATATTTGTC...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTAAGTTAATTTGGTTCTaGCAAGTAGATGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCKLIWF*QVDALP
Trigger: TGGAAGTGCATCTACTTGCCAGAACCAAATTAACTT...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATAAGTTAATTTGGTTCTaGCAAGTAGATGCACTTCCA +
Preference number: 2 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHKLIWF*QVDALP
Trigger: TGGAAGTGCATCTACTTGCCAGAACCAAATTAACTT...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATGGTTCATCAAGAGGTaGGTAAAAACTTTCAATTTG +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLWFIKR*VKTFNL
Trigger: CAAATTGAAAGTTTTTACCCACCTCTTGATGAACCA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATTCTATATCCATCCTTaGCCTTTTTCTAACATTGAC +
Preference number: 2 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLFYIHP*PFSNID
Trigger: GTCAATGTTAGAAAAAGGCCAAGGATGGATATAGAA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR GCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATGACAAATATAAAAACTaGTATAGTAGGGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHDKYKN*YSRAVF
Trigger: GAAGACTGCCCTACTATAGCAGTTTTTATATTTGTC...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTATTTTGCTACTTTCTaGTACTGCTTCATCACTGAA +
Preference number: 2 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVYFATF*YCFITE
Trigger: TTCAGTGATGAAGCAGTACCAGAAAGTAGCAAAATA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTATGTGGAGGCTGCTTCTaGGACTCAACTGCTTTCAGG +
Preference number: 3 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLCGGCF*DSTAFR
Trigger: CCTGAAAGCAGTTGAGTCCAAGAAGCAGCCTCCACA...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCTGTTCACTGGGGCGCTaGGCATTAGTTTTTCATCAA +
Preference number: 3 (lower is better)
Translates to: DVEASLLSLLLLLFTREVCSLGR*ALVFHQ
Trigger: TTGATGAAAAACTAATGCCAAGCGCCCCAGTGAACA...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTCTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAA +
Preference number: 3 (lower is better)
Translates to: VASVYKGSHGNMASIPHCLLSLL*LLFTRE
Trigger: TTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAG...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATCGCCTTGTGAAAGGCTaGGTCCTGGAGTTGTTGTCT +
Preference number: 3 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDRLVKG*VLELLS
Trigger: AGACAACAACTCCAGGACCAAGCCTTTCACAAGGCG...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR TCA 72 bp TGGCCTTTCACTCAAATCCCATGTATCTGCTTGCTCTaGTTCTGTGTCAGCTACGTATGTTGTAGTGTTCAC +
Preference number: 3 (lower is better)
Translates to: WPFTQIPCICLL*FCVSYVCCSVH
Trigger: GTGAACACTACAACATACGTAGCTGACACAGAATCAGAGCAAGCAGATACATGGGATTTGAGTGAAAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTACTGAAGCCATTTTGTTaGGATCACCAGAGTTTAGGT +
Preference number: 3 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLLKPFC*DHQSLG
Trigger: ACCTAAACTCTGGTGATCCAAACAAAATGGCTTCAG...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTAAACTAAACCCATGTTaGATGAAGTCTCCACATGGT +
Preference number: 3 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLKLNPC*MKSPHG
Trigger: ACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR TCA 72 bp GACCACCAAAAAGGGGTACAGGTCTTTCCATTCTGGTaGAAACTAAACCCATGTTTGATGAAGTCTCCACAT +
Preference number: 3 (lower is better)
Translates to: DHQKGVQVFPFW*KLNPCLMKSPH
Trigger: ATGTGGAGACTTCATCAAACATGGGTTTAGTTTTCACCAGAATGGAAAGACCTGTACCCCTTTTTGGTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR GCA 72 bp CTTTGTAGTCATGAAAATCACCGCCAATCCAATTTCTaGTTCAGGAATAGGTCTAAGACCTTGCCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: LCSHENHRQSNF*FRNRSKTLPLE
Trigger: CTCCAAAGGCAAGGTCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR CCA 72 bp ACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTaGTTCTGGCAAGTAGATGCACTTCCACAAGATTTG +
Preference number: 3 (lower is better)
Translates to: TCKQPELGSKLI*FWQVDALPQDL
Trigger: CAAATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTAAACTAAACCCATGTTaGATGAAGTCTCCACATGGT +
Preference number: 3 (lower is better)
Translates to: VPSVASVYKGSHGNMASIKLNPC*MKSPHG
Trigger: ACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTGGAGCATATCCATTATaGACTGAATCCATTTCTTCT +
Preference number: 3 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLGAYPL*TESISS
Trigger: AGAAGAAATGGATTCAGTCAATAATGGATATGCTCC...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAGTTATTGTCTGAGTTaGTGTCCACAGGCTCATTCT +
Preference number: 3 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHSYCLS*CPQAHS
Trigger: AGAATGAGCCTGTGGACACAAACTCAGACAATAACT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR TCA 72 bp TCATTCTCTAAACAACTAATCAGTTGTAGTGACTCTTaGCTGGAACTCCCTTCTTGCTGGATCACAGGTACA +
Preference number: 3 (lower is better)
Translates to: SFSKQLISCSDS*LELPSCWITGT
Trigger: TGTACCTGTGATCCAGCAAGAAGGGAGTTCCAGTCAAGAGTCACTACAACTGATTAGTTGTTTAGAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR CCA 72 bp AAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTaGCAAGTAGATGCACTTCCACAAGATTTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: KQPELGSKLIWF*QVDALPQDLEG
Trigger: ACCTTCCAAATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCAAAACTAAACCCATGTTaGATGAAGTCTCCACATGGT +
Preference number: 3 (lower is better)
Translates to: CKQPELGSKLIWFWQVDAKLNPC*MKSPHG
Trigger: ACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAGTAGAAATTGCAGATaGGCTCACCCAATTTCTGTT +
Preference number: 3 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHSRNCR*AHPISV
Trigger: AACAGAAATTGGGTGAGCCAATCTGCAATTTCTACT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGATCCATTTTGGAGACTTaGATTTCTTTTGGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGSILET*ISFGLS
Trigger: TGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGGA...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGATCTGGTTTTGTGTCCTaGAATAACTGTTCCAATACT +
Preference number: 3 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGSGFVS*NNCSNT
Trigger: AGTATTGGAACAGTTATTCAAGGACACAAAACCAGA...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATACCACTGAAGCCATTTaGTTTGGATCACCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDTTEAI*FGSPEF
Trigger: AAACTCTGGTGATCCAAACAAAATGGCTTCAGTGGT...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTCTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAA +
Preference number: 3 (lower is better)
Translates to: SIIFLNCKMETICSTSFTLLSLL*LLFTRE
Trigger: TTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAG...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR TCA 72 bp AGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGGGCATaGCAGAGAACAATATTAATCTGTCCATTATATTCC +
Preference number: 3 (lower is better)
Translates to: SRAVFLRKGLWA*QRTILICPLYS
Trigger: GGAATATAATGGACAGATTAATATTGTTCTCTGTCATGCCCACAATCCCTTTCTAAGGAAGACTGCCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR TCA 72 bp ATCTATGCAGCTACAGTAATTCAAGGCAGTATGGTATaGGTGAGTGCAAGGATGGACAAACATTTCAGTGTA +
Preference number: 3 (lower is better)
Translates to: IYAATVIQGSMV*VSARMDKHFSV
Trigger: TACACTGAAATGTTTGTCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
3UTR GCA 72 bp AGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTaGAAGGATGGACAAACATTTCAGTGTAACCAAACA +
Preference number: 3 (lower is better)
Translates to: SYSNSRQYGMSE*KDGQTFQCNQT
Trigger: TGTTTGGTTACACTGAAATGTTTGTCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
3UTR-3UTR CAA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTCTGAAGCCATTTTGTTaGGATCACCAGAGTTTAGGT +
Preference number: 3 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPALKPFC*DHQSLG
Trigger: ACCTAAACTCTGGTGATCCAAACAAAATGGCTTCAG...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTAACCACTGAAGCCATTTaGTTTGGATCACCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLTTEAI*FGSPEF
Trigger: AAACTCTGGTGATCCAAACAAAATGGCTTCAGTGGT...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTCTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAA +
Preference number: 3 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVLLSLL*LLFTRE
Trigger: TTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAG...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTTCCACCAGCTTCACTaGGTAATTATGATACATGGC +
Preference number: 3 (lower is better)
Translates to: SIIFLNCKMETICSTSFTFHQLH*VIMIHG
Trigger: GCCATGTATCATAATTACCAAGTGAAGCTGGTGGAA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTCTGAAGCCATTTTGTTaGGATCACCAGAGTTTAGGT +
Preference number: 3 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCLKPFC*DHQSLG
Trigger: ACCTAAACTCTGGTGATCCAAACAAAATGGCTTCAG...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGAAGTAGAAATTGCAGATaGGCTCACCCAATTTCTGTT +
Preference number: 3 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRSRNCR*AHPISV
Trigger: AACAGAAATTGGGTGAGCCAATCTGCAATTTCTACT...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATATCACTACACACCGATaGGAATGGTTAAAAAGGAAA +
Preference number: 3 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDITTHR*EWLKRK
Trigger: TTTCCTTTTTAACCATTCCAATCGGTGTGTAGTGAT...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTGGCCTTTTTCTAACATaGACATCTTCCTCCTGTTTT +
Preference number: 3 (lower is better)
Translates to: SIIFLNCKMETICSTSFTGLFLT*TSSSCF
Trigger: AAAACAGGAGGAAGATGTCAATGTTAGAAAAAGGCC...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
3UTR TCA 72 bp AATGAGTGCACATATTGTTTTAATGGTAACTTTCACTaGTACCATGACAAGGTGAGTGCATTCTTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: NECTYCFNGNFH*YHDKVSAFFCP
Trigger: TGGACAGAAGAATGCACTCACCTTGTCATGGTATCAGTGAAAGTTACCATTAAAACAATATGTGCACTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396252.6
ENST00000523444.1
3UTR-3UTR CAA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATATCCGACAAGAGACTaGCATCTAGAATGTATAAAG +
Preference number: 3 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLYPTRD*HLECIK
Trigger: CTTTATACATTCTAGATGCAAGTCTCTTGTCGGATA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR-3UTR CAA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTATCCGACAAGAGACTaGCATCTAGAATGTATAAAG +
Preference number: 3 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPAYPTRD*HLECIK
Trigger: CTTTATACATTCTAGATGCAAGTCTCTTGTCGGATA...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR TCA 72 bp TTCTATACACTATATATTCATATAACCTTGTTGGCCTaGAGTAGATGCTTACTAGGAAGTTTTTCCATGGCT +
Preference number: 3 (lower is better)
Translates to: FYTLYIHITLLA*SRCLLGSFSMA
Trigger: AGCCATGGAAAAACTTCCTAGTAAGCATCTACTTCAGGCCAACAAGGTTATATGAATATATAGTGTATAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
ENST00000613033.1
CDS-3UTR TCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGGCAGGCTGCCTTGGATaGGGCGGGAGTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLAGCLG*GGSATW
Trigger: CCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGC...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACGCGGATACGGCGCCTaGGGTCGGCATGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDARGYGA*GRHGLR
Trigger: CCGGAGCCCATGCCGACCGCAGGCGCCGTATCCGCG...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTGTATGGTTCTCCTCCTaGCGGGCCCGCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCVWFSS*RARGGQ
Trigger: CTGCCCGCCGCGGGCCCGGCAGGAGGAGAACCATAC...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CCA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTAGGCGGGAGTGCGACTTaGGCGCTTGCCCGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLGGSAT*ALARHQ
Trigger: CTGGTGGCGGGCAAGCGCCCAAGTCGCACTCCCGCC...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACCCCACCGCCCGCGCTaGATTCCAGCTCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDAPHRPR*IPAHSR
Trigger: GCGGCTGTGAGCTGGAATTCAGCGCGGGCGGTGGGG...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR GCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATGGGCTGGGGCCGACGTaGAACCGCGTAACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHGLGPT*NRVTGA
Trigger: AGCCCCGGTTACGCGGTTGCACGTCGGCCCCAGCCC...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTAGGGGCGCGGAGGACTaGCACCAGGGGGCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPARGAED*HQGAPQ
Trigger: TTGCGGCGCCCCCTGGTGGCAGTCCTCCGCGCCCCT...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGACCGGCTCCTCAGGGCTaGGGCCGACGTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRPAPQG*GRRATA
Trigger: CGCGGTTGCACGTCGGCCCCAGCCCTGAGGAGCCGG...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCACCGGCTCCTCAGGGCTaGGGCCGACGTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPPAPQG*GRRATA
Trigger: CGCGGTTGCACGTCGGCCCCAGCCCTGAGGAGCCGG...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR GCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTCGCGGATACGGCGCCTaGGGTCGGCATGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCRGYGA*GRHGLR
Trigger: CCGGAGCCCATGCCGACCGCAGGCGCCGTATCCGCG...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCAGGGCTGGGGCCGACGTaGAACCGCGTAACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPGLGPT*NRVTGA
Trigger: AGCCCCGGTTACGCGGTTGCACGTCGGCCCCAGCCC...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR GCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCAGTATGGTTCTCCTCCTaGCGGGCCCGCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPVWFSS*RARGGQ
Trigger: CTGCCCGCCGCGGGCCCGGCAGGAGGAGAACCATAC...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR GCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTATGGGCTCCGGGACGTaGGCGCTCCCGGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCMGSGT*ALPGAT
Trigger: CGTGGCTCCCGGGAGCGCGCACGTCCCGGAGCCCAT...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCTGCCCGGGAAGAATATaGGCTTGCCATACAGCGTAC +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVCPGRI*ACHTAY
Trigger: GTACGCTGTATGGCAAGCGCATATTCTTCCCGGGCA...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATCCGGCTCCTCAGGGCTaGGGCCGACGTGCAACCGCG +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHPAPQG*GRRATA
Trigger: CGCGGTTGCACGTCGGCCCCAGCCCTGAGGAGCCGG...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGAGTCAAAAGTCTGTATaGTTCTCCTCCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLSQKSV*FSSCRA
Trigger: GGCCCGGCAGGAGGAGAACCATACAGACTTTTGACT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR TCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCCAAGGCAGTATGGTATaGGTGAGTGCAAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVQGSMV*VSARMD
Trigger: GTCCATCCTTGCACTCACTCATACCATACTGCCTTG...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATGGGCTGGGGCCGACGTaGAACCGCGTAACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHGLGPT*NRVTGA
Trigger: AGCCCCGGTTACGCGGTTGCACGTCGGCCCCAGCCC...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGTATGGTTCTCCTCCTaGCGGGCCCGCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCVWFSS*RARGGQ
Trigger: CTGCCCGCCGCGGGCCCGGCAGGAGGAGAACCATAC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGACCACGCAGGCTGCCTTaGATGAGGCGGGAGTGCGAC +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRPRRLP*MRRECD
Trigger: GTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGG...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGGATACCATGACAAGGTaGGTGCATTCTTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLDTMTR*VHSSVQ
Trigger: TTGGACAGAAGAATGCACTCACCTTGTCATGGTATC...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCTGTATCTGCTTGCTCTaGTTCTGTGTCAGCTACGTA +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVCICLL*FCVSYV
Trigger: TACGTAGCTGACACAGAATCAGAGCAAGCAGATACA...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTGGATGAGGCGGGAGTaGGACTTGGGCGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVWMRRE*DLGACP
Trigger: CGGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGAGGACTCCTTTACAGTaGGTGCATCTTGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLRTPLQ*VHLVKA
Trigger: TGCTTTCACAAGATGCACCCACTGTAAAGGAGTCCT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCTTTACATCTGTGATGTaGGAGGTTGTTCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVFTSVM*EVVPGN
Trigger: GTTCCCTGGAACAACCTCCCACATCACAGATGTAAA...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGATAGTGAGTCTTCCTTaGGTTCACGTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLIVSLP*VHVSSQ
Trigger: TTGGGAAGAAACGTGAACTCAAGGAAGACTCACTAT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTAGCTCACAGCCGCCGTaGTGCCCGGGAAGAATATGC +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTSSQPP*CPGRIC
Trigger: GCATATTCTTCCCGGGCAGCACGGCGGCTGTGAGCT...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTAGTCAAAAGTCTGTATaGTTCTCCTCCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSISQKSV*FSSCRA
Trigger: GGCCCGGCAGGAGGAGAACCATACAGACTTTTGACT...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
3UTR CAA 72 bp GAGAGTGATGTAGAGGCCAGCCTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAAGTCATGGAAATATGG +
Preference number: 4 (lower is better)
Translates to: ESDVEASLLSLL*LLFTREVMEIW
Trigger: CCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATCACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR CAA 72 bp ATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTaGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IWFWQVDALPQD*EGESDVEASLL
Trigger: CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGAGTGGGTGCATCTTGTaGAAGCATTCTGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLSGCIL*KHSEFL
Trigger: CAAAAATTCAGAATGCTTTCACAAGATGCACCCACT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCAGTGGGTGCATCTTGTaGAAGCATTCTGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVSGCIL*KHSEFL
Trigger: CAAAAATTCAGAATGCTTTCACAAGATGCACCCACT...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTTGGTCTGCTGCTGCTaGGAAGCCCTATCTTTACTT +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASILVCCC*EALSLL
Trigger: AAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTGCTGAAAGTAGTTTCTaGTGGAGTTGGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASIAESSF*WSWSAA
Trigger: AGCAGCAGACCAACTCCATCAGAAACTACTTTCAGC...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTCAAGGCAGTATGGTATaGGTGAGTGCAAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIQGSMV*VSARMD
Trigger: GTCCATCCTTGCACTCACTCATACCATACTGCCTTG...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTCACAGCCGCCGTGCTaGCCGGGAAGAATATGCGCT +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHSQPPC*PGRICA
Trigger: AGCGCATATTCTTCCCGGGCAGCACGGCGGCTGTGA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTCCTCCAATGATGTGTaGAAGTTTTCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASISSNDV*KFSCSR
Trigger: CCTGGAGCAGGAAAACTTCCACACATCATTGGAGGA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGCAGTGTTACAATGACTaGATACTTGTATGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLQCYND*ILVWGK
Trigger: TTTCCCCCATACAAGTATCCAGTCATTGTAACACTG...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAGTCAAAAGTCTGTATaGTTCTCCCGCAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHSQKSV*FSRRPS
Trigger: GGATGGCCTGCGGGAGAACCATACAGACTTTTGACT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR TCA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTATGTATCTGCTTGCTCTaGTTCTGTGTCAGCTACGTA +
Preference number: 4 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLCICLL*FCVSYV
Trigger: TACGTAGCTGACACAGAATCAGAGCAAGCAGATACA...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp ATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGACCTTGCTTGGTCTGCTGCTGCTaGGAAGCCCTATCTTTACTT +
Preference number: 4 (lower is better)
Translates to: MKITANPISASGIGLRPCLVCCC*EALSLL
Trigger: AAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAA...GCAAGGTCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTGCTGAAAGTAGTTTCTaGTGGAGTTGGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIAESSF*WSWSAA
Trigger: AGCAGCAGACCAACTCCATCAGAAACTACTTTCAGC...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGCTGGTTTTGTGTCCTTaGATAACTGTTCCAATACTT +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLLVLCP*ITVPIL
Trigger: AAGTATTGGAACAGTTATTCAAGGACACAAAACCAG...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTGATCTGATCCTCCAATaGTGTGTGGAAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASIDLILQ*CVEVFL
Trigger: CAGGAAAACTTCCACACATCATTGGAGGATCAGATC...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCAAGTTGTAGTGACTCTTaGCTGGAACTCCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDASCSDS*LELPSC
Trigger: GCAAGAAGGGAGTTCCAGTCAAGAGTCACTACAACT...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp ATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGACCTTGCGCAGTATGGTATGAGTaGGTGCAAGGATGGACAAAC +
Preference number: 4 (lower is better)
Translates to: MKITANPISASGIGLRPCAVWYE*VQGWTN
Trigger: GTTTGTCCATCCTTGCACTCACTCATACCATACTGC...GCAAGGTCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTATCAATTTGTGGAGGCTaGTTCTTGGACTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVSICGG*FLDSTA
Trigger: AGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGA...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCAATTTGTGGAGGCTaGTTCTTGGACTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCSICGG*FLDSTA
Trigger: AGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGA...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTATCCCATGTATCTGCTTaGTCTGATTCTGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLSHVSA*SDSVSA
Trigger: AGCTGACACAGAATCAGAGCAAGCAGATACATGGGA...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCCATGTATCTGCTTaGTCTGATTCTGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCSHVSA*SDSVSA
Trigger: AGCTGACACAGAATCAGAGCAAGCAGATACATGGGA...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCTCATTCTCAGATAGATaGTGCTCCTTATTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVSFSDR*CSLFFH
Trigger: GTGGAAAAATAAGGAGCAGCATCTATCTGAGAATGA...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGTCATTCTCAGATAGATaGTGCTCCTTATTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLSFSDR*CSLFFH
Trigger: GTGGAAAAATAAGGAGCAGCATCTATCTGAGAATGA...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGTGTGGAAGTTTTCCTaGTCCAGGATATGTGACCTT +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVVWKFS*SRICDL
Trigger: AAGGTCACATATCCTGGAGCAGGAAAACTTCCACAC...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTATGTACCTCCATTTCCTaGCTTAGCCACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLCTSIS*LSHSSS
Trigger: ACTAGAAGAGTGGCTAAGGCAGGAAATGGAGGTACA...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTAGGACTCCTTTACAGTaGGTGCATCTTGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASIRTPLQ*VHLVKA
Trigger: TGCTTTCACAAGATGCACCCACTGTAAAGGAGTCCT...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTACAGCATGATTTCGGCTaGTCGACTGATCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLQHDFG*STDHFQ
Trigger: TTGAAAATGATCAGTCGATCAGCCGAAATCATGCTG...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCTTTCACTGATACCATaGCAAGGTGAGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASILSLIP*QGECIL
Trigger: AAGAATGCACTCACCTTGTCATGGTATCAGTGAAAG...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCTTTCCTGCCGTCCTaGCAGATCAACATTTTTACT +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCSFLPS*QINIFT
Trigger: AGTAAAAATGTTGATCTGTCAGGACGGCAGGAAAGA...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGACTTATTTTTCCACAATaGGGGTGTAGCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGLIFPQ*GCSRLC
Trigger: ACACAACCTGCTACACCCTCATTGTGGAAAAATAAG...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTGATCTGATCCTCCAATaGTGTGTGGAAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIDLILQ*CVEVFL
Trigger: CAGGAAAACTTCCACACATCATTGGAGGATCAGATC...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTATAACCTTGTTGGCCTaGAGTAGATGCTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCITLLA*SRCLLG
Trigger: TCCTAGTAAGCATCTACTTCAGGCCAACAAGGTTAT...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATGTGTGGAAGTTTTCCTaGTCCAGGATATGTGACCTT +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHVWKFS*SRICDL
Trigger: AAGGTCACATATCCTGGAGCAGGAAAACTTCCACAC...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCATGTACCTCCATTTCCTaGCTTAGCCACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDACTSIS*LSHSSS
Trigger: ACTAGAAGAGTGGCTAAGGCAGGAAATGGAGGTACA...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCTTGTCCCTTCTGTTaGTTCTGTTTACAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCSCPFC*FCLQGK
Trigger: CTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGA...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTATTCTGGCTTTACAATTaGACGTCCACAAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVFWLYN*TSTNEC
Trigger: GCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAA...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGATCATTTATGCCAGATaGATTTCTGGAAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: DALPQDLEGESDVEASLLIIYAR*ISGSRV
Trigger: AACTCTACTTCCAGAAATCCATCTGGCATAAATGAT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATCATTTATGCCAGATaGATTTCTGGAAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: DVEASLLSLLLLLFTREVIIYAR*ISGSRV
Trigger: AACTCTACTTCCAGAAATCCATCTGGCATAAATGAT...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR CAA 72 bp TTAGTTTTTCATCAACTGACACGCCTTGTGAAAGGCTaGGTCCTGGAGTTGTTGTCTTTAATCCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: LVFHQLTRLVKG*VLELLSLILYW
Trigger: CCAGTACAGGATTAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAAAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTCAGCATGATTTCGGCTaGTCGACTGATCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIQHDFG*STDHFQ
Trigger: TTGAAAATGATCAGTCGATCAGCCGAAATCATGCTG...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCATCTTTCCTGCCGTCCTaGCAGATCAACATTTTTACT +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDASFLPS*QINIFT
Trigger: AGTAAAAATGTTGATCTGTCAGGACGGCAGGAAAGA...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTGAGCATATCCATTATTaGCTGAATCCATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLEHIHY*LNPFLL
Trigger: CAGAAGAAATGGATTCAGTCAATAATGGATATGCTC...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTATGGCAATTTAGTTGGTaGAAGCTGATAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVWQFSW*KLIVWD
Trigger: ATCCCAAACTATCAGCTTTCACCAACTAAATTGCCA...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGAAAGGGATTGTGGGCATaGCAGAGAACAATATTAATC +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGKGLWA*QRTILI
Trigger: GATTAATATTGTTCTCTGTCATGCCCACAATCCCTT...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCAGCCTGTAGTAGAAATTaGAGATTGGCTCACCCAATT +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDAACSRN*RLAHPI
Trigger: AATTGGGTGAGCCAATCTGCAATTTCTACTACAGGC...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATGGAAGAATATGCGCTTaGCATACAGCGTACTCGCCG +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHGRICA*HTAYSP
Trigger: CGGCGAGTACGCTGTATGGCAAGCGCATATTCTTCC...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTACTAAGACCTTGCCTTTaGAGCATATCCATTATTGAC +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVLRPCL*SISIID
Trigger: GTCAATAATGGATATGCTCCAAAGGCAAGGTCTTAG...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GTTATTCCTGTATCAACAACACACGTTCCCGGAGCCAAAAAGAAATTATGTTCTTCCTCCAATGATGTGTaGAAGTTTTCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIPVSTTHVPGAKKKLCSSSNDV*KFSCSR
Trigger: CCTGGAGCAGGAAAACTTCCACACATCATTGGAGGA...AGAACATAATTTCTTTTTGGCTCCGGGAACGTGTGTTGTTGATACAGGAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTTACAAGGGAAGTCATaGAAATATGGCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHLQGKS*KYGLHS
Trigger: GGAATGGAGGCCATATTTCCATGACTTCCCTTGTAA...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTTTACAAGGGAAGTCATaGAAATATGGCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSILQGKS*KYGLHS
Trigger: GGAATGGAGGCCATATTTCCATGACTTCCCTTGTAA...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTAAGTTAATTTGGTTCTaGCAAGTAGATGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLKLIWF*QVDALP
Trigger: TGGAAGTGCATCTACTTGCCAGAACCAAATTAACTT...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
3UTR CAA 72 bp ATTTCTTCTGACAGTCAGGAATTAAGGTCTGTGAGTTaGTTATTCCTGTATCAACAACACACGTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ISSDSQELRSVS*LFLYQQHTFPE
Trigger: CTCCGGGAACGTGTGTTGTTGATACAGGAATAACAAACTCACAGACCTTAATTCCTGACTGTCAGAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTTTTCGGCTGATCGACTaGTCATTTTCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIFRLID*SFSIRM
Trigger: CATTCTGATTGAAAATGATCAGTCGATCAGCCGAAA...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGAGCTCATACTCTATTCTaGATTTACTTCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGAHTLF*IYFQTL
Trigger: GAGTGTTTGGAAGTAAATTCAGAATAGAGTATGAGC...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR TCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAATGGTAACTTTCACTaGTACCATGACAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHNGNFH*YHDKVS
Trigger: ACTCACCTTGTCATGGTATCAGTGAAAGTTACCATT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCAAATGGTAACTTTCACTaGTACCATGACAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDANGNFH*YHDKVS
Trigger: ACTCACCTTGTCATGGTATCAGTGAAAGTTACCATT...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGAGAGCATATCCATTATTaGCTGAATCCATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGEHIHY*LNPFLL
Trigger: CAGAAGAAATGGATTCAGTCAATAATGGATATGCTC...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTCCATTTTGGAGACTTTaGTTTCTTTTGGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIPFWRL*FLLAFH
Trigger: GTGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGG...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTTGGTCTGCTGCTGCTaGGAAGCCCTATCTTTACTT +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTLVCCC*EALSLL
Trigger: AAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTGCTGAAAGTAGTTTCTaGTGGAGTTGGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPAAESSF*WSWSAA
Trigger: AGCAGCAGACCAACTCCATCAGAAACTACTTTCAGC...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCAAGCTTTTCTGCAGCATaGGATTTACTGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDASFSAA*DLLAEF
Trigger: AAATTCTGCCAGTAAATCTCATGCTGCAGAAAAGCT...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAGCTTTTCTGCAGCATaGGATTTACTGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHSFSAA*DLLAEF
Trigger: AAATTCTGCCAGTAAATCTCATGCTGCAGAAAAGCT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTAGCTTTTCTGCAGCATaGGATTTACTGGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSISFSAA*DLLAEF
Trigger: AAATTCTGCCAGTAAATCTCATGCTGCAGAAAAGCT...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTACTGGTTTTGTGTCCTTaGATAACTGTTCCAATACTT +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVLVLCP*ITVPIL
Trigger: AAGTATTGGAACAGTTATTCAAGGACACAAAACCAG...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTGTACTGCTTCATCACTaGAAGTGTCATTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASIVLLHH*KCHLFL
Trigger: TAGAAACAAATGACACTTTCAGTGATGAAGCAGTAC...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATGATCTGATCCTCCAATaGTGTGTGGAAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDDLILQ*CVEVFL
Trigger: CAGGAAAACTTCCACACATCATTGGAGGATCAGATC...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGATCTTCTTTTGCATGTTaGTTTTGTACCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGSSFAC*FCTSIS
Trigger: GGAAATGGAGGTACAAAATCAACATGCAAAAGAAGA...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR TCA 90 bp GTAGTCATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGAATAACCTTGTTGGCCTaGAGTAGATGCTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: VVMKITANPISASGIGLRITLLA*SRCLLG
Trigger: TCCTAGTAAGCATCTACTTCAGGCCAACAAGGTTAT...TCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAAGGGATTGTGGGCATaGCAGAGAACAATATTAATC +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHKGLWA*QRTILI
Trigger: GATTAATATTGTTCTCTGTCATGCCCACAATCCCTT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTCTTCTTGGACTCAACTaGTTTCAGGAATTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCLLGLN*FQEFSK
Trigger: TTTACTGAATTCCTGAAAGCAGTTGAGTCCAAGAAG...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTCAATTTGTGGAGGCTaGTTCTTGGACTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDSICGG*FLDSTA
Trigger: AGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GTAGTCATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGACGCCAATCCAATTTCTaGTTCAGGAATAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: VVMKITANPISASGIGLRRQSNF*FRNRSK
Trigger: CTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCG...TCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCATTCTCAGATAGATaGTGCTCCTTATTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: VASVYKGSHGNMASIPHCSFSDR*CSLFFH
Trigger: GTGGAAAAATAAGGAGCAGCATCTATCTGAGAATGA...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTGTACCTCCATTTCCTaGCTTAGCCACTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDCTSIS*LSHSSS
Trigger: ACTAGAAGAGTGGCTAAGGCAGGAAATGGAGGTACA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTCAAGGTGTAGAACACTaGATATGTTATGCTATCATT +
Preference number: 4 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLQGVEH*ICYAII
Trigger: AATGATAGCATAACATATGCAGTGTTCTACACCTTG...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTATGGTATGAGTGAGTaGAAGGATGGACAAACATTT +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASIYGMSE*KDGQTF
Trigger: AAATGTTTGTCCATCCTTGCACTCACTCATACCATA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CCA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTTTCTATATCCATCCTTaGCCTTTTTCTAACATTGAC +
Preference number: 4 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLFYIHP*PFSNID
Trigger: GTCAATGTTAGAAAAAGGCCAAGGATGGATATAGAA...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTCCTCCAATGATGTGTaGAAGTTTTCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTSSNDV*KFSCSR
Trigger: CCTGGAGCAGGAAAACTTCCACACATCATTGGAGGA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGAGTAGTGACTCTTGACTaGAACTCCCTTCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRVVTLD*NSLLAG
Trigger: TCCAGCAAGAAGGGAGTTCCAGTCAAGAGTCACTAC...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTATCCTTAACTGTAAAATaGAGACCATATGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVSLTVK*RPYVPP
Trigger: TGGTGGAACATATGGTCTCCATTTTACAGTTAAGGA...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTCAGTGTTACAATGACTaGATACTTGTATGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIQCYND*ILVWGK
Trigger: TTTCCCCCATACAAGTATCCAGTCATTGTAACACTG...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATCAGTGTTACAATGACTaGATACTTGTATGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHQCYND*ILVWGK
Trigger: TTTCCCCCATACAAGTATCCAGTCATTGTAACACTG...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGATTGCAGGTATTCCTTTaGAATCTGTTAGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGLQVFL*NLLVWF
Trigger: AAACCACACTAACAGATTCCAAAGGAATACCTGCAA...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCAGATACCATGACAAGGTaGGTGCATTCTTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPDTMTR*VHSSVQ
Trigger: TTGGACAGAAGAATGCACTCACCTTGTCATGGTATC...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR TCA 90 bp GTTATTCCTGTATCAACAACACACGTTCCCGGAGCCAAAAAGAAATTATGTTCTTCTTTCCTGCCGTCCTaGCAGATCAACATTTTTACT +
Preference number: 4 (lower is better)
Translates to: VIPVSTTHVPGAKKKLCSSFLPS*QINIFT
Trigger: AGTAAAAATGTTGATCTGTCAGGACGGCAGGAAAGA...AGAACATAATTTCTTTTTGGCTCCGGGAACGTGTGTTGTTGATACAGGAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATGAGCATATCCATTATTaGCTGAATCCATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHEHIHY*LNPFLL
Trigger: CAGAAGAAATGGATTCAGTCAATAATGGATATGCTC...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATAGTTGTAGTGACTCTTaGCTGGAACTCCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHSCSDS*LELPSC
Trigger: GCAAGAAGGGAGTTCCAGTCAAGAGTCACTACAACT...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTGCAGTATGGTATGAGTaGGTGCAAGGATGGACAAAC +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVAVWYE*VQGWTN
Trigger: GTTTGTCCATCCTTGCACTCACTCATACCATACTGC...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR GCA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATCTTCTTGGACTCAACTaGTTTCAGGAATTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHLLGLN*FQEFSK
Trigger: TTTACTGAATTCCTGAAAGCAGTTGAGTCCAAGAAG...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GATGGAGTTGGTCTGCTGCTGCTGAGAAGCCCTATCTTTACTTTTATTTATACTACCTCCAAAGACAACTaGGGAACTCAATTTCTTATG +
Preference number: 4 (lower is better)
Translates to: DGVGLLLLRSPIFTFIYTTSKDN*GTQFLM
Trigger: CATAAGAAATTGAGTTCCGCAGTTGTCTTTGGAGGT...AGTATAAATAAAAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAACTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGACAAATATAAAAACTaGTATAGTAGGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVDKYKN*YSRAVF
Trigger: GAAGACTGCCCTACTATAGCAGTTTTTATATTTGTC...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTATGGTTCATCAAGAGGTaGGTAAAAACTTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: STCKQPELGSKLIWFWQVWFIKR*VKTFNL
Trigger: CAAATTGAAAGTTTTTACCCACCTCTTGATGAACCA...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGATGGTTCATCAAGAGGTaGGTAAAAACTTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGWFIKR*VKTFNL
Trigger: CAAATTGAAAGTTTTTACCCACCTCTTGATGAACCA...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCATTTACTTCCAATAGATaGTTCATCAAGAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDAFTSNR*FIKRWV
Trigger: TACCCACCTCTTGATGAACCATCTATTGGAAGTAAA...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GATGGAGTTGGTCTGCTGCTGCTGAGAAGCCCTATCTTTACTTTTATTTATACTCTAAGACCTTGCCTTTaGAGCATATCCATTATTGAC +
Preference number: 4 (lower is better)
Translates to: DGVGLLLLRSPIFTFIYTLRPCL*SISIID
Trigger: GTCAATAATGGATATGCTCCAAAGGCAAGGTCTTAG...AGTATAAATAAAAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAACTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTATTTTGCTACTTTCTaGTACTGCTTCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: VPSVASVYKGSHGNMASIYFATF*YCFITE
Trigger: TTCAGTGATGAAGCAGTACCAGAAAGTAGCAAAATA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATGTAGTGACTCTTGACTaGAACTCCCTTCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHVVTLD*NSLLAG
Trigger: TCCAGCAAGAAGGGAGTTCCAGTCAAGAGTCACTAC...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTTACAAGGGAAGTCATaGAAATATGGCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDLQGKS*KYGLHS
Trigger: GGAATGGAGGCCATATTTCCATGACTTCCCTTGTAA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCATCCTTAACTGTAAAATaGAGACCATATGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDASLTVK*RPYVPP
Trigger: TGGTGGAACATATGGTCTCCATTTTACAGTTAAGGA...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATGGAATCTGTTAGTGTaGTTTGTCCCCTTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRWNLLV*FVPFLA
Trigger: TGCTAGGAAGGGGACAAACCACACTAACAGATTCCA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR TCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTTTCGGCTGATCGACTaGTCATTTTCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDFRLID*SFSIRM
Trigger: CATTCTGATTGAAAATGATCAGTCGATCAGCCGAAA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGATACCATGACAAGGTaGGTGCATTCTTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCDTMTR*VHSSVQ
Trigger: TTGGACAGAAGAATGCACTCACCTTGTCATGGTATC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATGATACCATGACAAGGTaGGTGCATTCTTCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHDTMTR*VHSSVQ
Trigger: TTGGACAGAAGAATGCACTCACCTTGTCATGGTATC...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCACTTTCACTGATACCATaGCAAGGTGAGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPLSLIP*QGECIL
Trigger: AAGAATGCACTCACCTTGTCATGGTATCAGTGAAAG...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR TCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTGTATCTGCTTGCTCTaGTTCTGTGTCAGCTACGTA +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVCICLL*FCVSYV
Trigger: TACGTAGCTGACACAGAATCAGAGCAAGCAGATACA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTAATAGTGAGTCTTCCTTaGGTTCACGTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLIVSLP*VHVSSQ
Trigger: TTGGGAAGAAACGTGAACTCAAGGAAGACTCACTAT...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTATAGTGAGTCTTCCTTaGGTTCACGTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTIVSLP*VHVSSQ
Trigger: TTGGGAAGAAACGTGAACTCAAGGAAGACTCACTAT...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATACCTCCAAAGACAACTaGGGAACTCAATTTCTTATG +
Preference number: 4 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDTSKDN*GTQFLM
Trigger: CATAAGAAATTGAGTTCCGCAGTTGTCTTTGGAGGT...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTACGCCAATCCAATTTCTaGTTCAGGAATAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLRQSNF*FRNRSK
Trigger: CTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCG...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTCCCATGTATCTGCTTaGTCTGATTCTGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVSHVSA*SDSVSA
Trigger: AGCTGACACAGAATCAGAGCAAGCAGATACATGGGA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGTGTGGAAGTTTTCCTaGTCCAGGATATGTGACCTT +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCVWKFS*SRICDL
Trigger: AAGGTCACATATCCTGGAGCAGGAAAACTTCCACAC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GATGGAGTTGGTCTGCTGCTGCTGAGAAGCCCTATCTTTACTTTTATTTATACTTATGGTATGAGTGAGTaGAAGGATGGACAAACATTT +
Preference number: 4 (lower is better)
Translates to: DGVGLLLLRSPIFTFIYTYGMSE*KDGQTF
Trigger: AAATGTTTGTCCATCCTTGCACTCACTCATACCATA...AGTATAAATAAAAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAACTCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATTCTGGCTTTACAATTaGACGTCCACAAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLFWLYN*TSTNEC
Trigger: GCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCATTCTGGCTTTACAATTaGACGTCCACAAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPFWLYN*TSTNEC
Trigger: GCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAA...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR CCA 90 bp GTAGTCATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGATTTACTTCCAATAGATaGTTCATCAAGAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VVMKITANPISASGIGLRFTSNR*FIKRWV
Trigger: TACCCACCTCTTGATGAACCATCTATTGGAAGTAAA...TCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTAGGACTCCTTTACAGTaGGTGCATCTTGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCRTPLQ*VHLVKA
Trigger: TGCTTTCACAAGATGCACCCACTGTAAAGGAGTCCT...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCATTCTATATCCATCCTTaGCCTTTTTCTAACATTGAC +
Preference number: 4 (lower is better)
Translates to: CKQPELGSKLIWFWQVDAFYIHP*PFSNID
Trigger: GTCAATGTTAGAAAAAGGCCAAGGATGGATATAGAA...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGAGAAGTCATGGAAATATaGCCTCCATTCCTCACTGTT +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLREVMEI*PPFLTV
Trigger: AACAGTGAGGAATGGAGGCCATATTTCCATGACTTC...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCATTTCGGCTGATCGACTaGTCATTTTCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPFRLID*SFSIRM
Trigger: CATTCTGATTGAAAATGATCAGTCGATCAGCCGAAA...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATCTTTCACTGATACCATaGCAAGGTGAGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHLSLIP*QGECIL
Trigger: AAGAATGCACTCACCTTGTCATGGTATCAGTGAAAG...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCAAATGGTAACTTTCACTaGTACCATGACAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPNGNFH*YHDKVS
Trigger: ACTCACCTTGTCATGGTATCAGTGAAAGTTACCATT...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR TCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTCCATTTTGGAGACTTTaGTTTCTTTTGGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPAPFWRL*FLLAFH
Trigger: GTGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGG...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGACCATTTTGGAGACTTTaGTTTCTTTTGGCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRPFWRL*FLLAFH
Trigger: GTGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGG...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTAGTGGGTGCATCTTGTaGAAGCATTCTGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTSGCIL*KHSEFL
Trigger: CAAAAATTCAGAATGCTTTCACAAGATGCACCCACT...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTGGCAATTTAGTTGGTaGAAGCTGATAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTWQFSW*KLIVWD
Trigger: ATCCCAAACTATCAGCTTTCACCAACTAAATTGCCA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATCTTATTTTTCCACAATaGGGGTGTAGCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHLIFPQ*GCSRLC
Trigger: ACACAACCTGCTACACCCTCATTGTGGAAAAATAAG...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTCTTATTTTTCCACAATaGGGGTGTAGCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVLIFPQ*GCSRLC
Trigger: ACACAACCTGCTACACCCTCATTGTGGAAAAATAAG...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATATAACCTTGTTGGCCTaGAGTAGATGCTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHITLLA*SRCLLG
Trigger: TCCTAGTAAGCATCTACTTCAGGCCAACAAGGTTAT...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTAAGGGATTGTGGGCATaGCAGAGAACAATATTAATC +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPAKGLWA*QRTILI
Trigger: GATTAATATTGTTCTCTGTCATGCCCACAATCCCTT...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CTTGATTTAAAGCAGTTTTCCCAGAGACATCTGAATTTACTTCCAAACACTCCATTTCCCAGAGACATCTaGATTTACTTCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: LDLKQFSQRHLNLLPNTPFPRDI*IYFQTL
Trigger: GAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAA...TGGAGTGTTTGGAAGTAAATTCAGATGTCTCTGGGAAAACTGCTTTAAATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523444.1
CDS-3UTR GCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTTCTTGTCCCTTCTGTTaGTTCTGTTTACAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCSCPFC*FCLQGK
Trigger: CTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGA...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTGCCTGTAGTAGAAATTaGAGATTGGCTCACCCAATT +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVACSRN*RLAHPI
Trigger: AATTGGGTGAGCCAATCTGCAATTTCTACTACAGGC...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp GATGGAGTTGGTCTGCTGCTGCTGAGAAGCCCTATCTTTACTTTTATTTATACTGACAAATATAAAAACTaGTATAGTAGGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: DGVGLLLLRSPIFTFIYTDKYKN*YSRAVF
Trigger: GAAGACTGCCCTACTATAGCAGTTTTTATATTTGTC...AGTATAAATAAAAGTAAAGATAGGGCTTCTCAGCAGCAGCAGACCAACTCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGAGTAGTTTCGTGCGTTTaGAGTTTCTTAAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRVVSCV*SFLNCR
Trigger: CCTGCAATTTAAGAAACTGCAAACGCACGAAACTAC...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTTCTGGCTTTACAATTaGACGTCCACAAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVFWLYN*TSTNEC
Trigger: GCACTCATTTGTGGACGTCCAATTGTAAAGCCAGAA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTCTAAGACCTTGCCTTTaGAGCATATCCATTATTGAC +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPALRPCL*SISIID
Trigger: GTCAATAATGGATATGCTCCAAAGGCAAGGTCTTAG...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGAAGTCATGGAAATATaGCCTCCATTCCTCACTGTT +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCEVMEI*PPFLTV
Trigger: AACAGTGAGGAATGGAGGCCATATTTCCATGACTTC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGAGCTCATACTCTATTCTaGATTTACTTCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRAHTLF*IYFQTL
Trigger: GAGTGTTTGGAAGTAAATTCAGAATAGAGTATGAGC...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTGGCAATTTAGTTGGTaGAAGCTGATAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVWQFSW*KLIVWD
Trigger: ATCCCAAACTATCAGCTTTCACCAACTAAATTGCCA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTCTGGTTTTGTGTCCTTaGATAACTGTTCCAATACTT +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPALVLCP*ITVPIL
Trigger: AAGTATTGGAACAGTTATTCAAGGACACAAAACCAG...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTGTACTGCTTCATCACTaGAAGTGTCATTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTVLLHH*KCHLFL
Trigger: TAGAAACAAATGACACTTTCAGTGATGAAGCAGTAC...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGATGAAGTCTCCACATaGTCTTCAGTTTCTAGTACT +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCDEVST*SSVSST
Trigger: AGTACTAGAAACTGAAGACCATGTGGAGACTTCATC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATGATGAAGTCTCCACATaGTCTTCAGTTTCTAGTACT +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHDEVST*SSVSST
Trigger: AGTACTAGAAACTGAAGACCATGTGGAGACTTCATC...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATCCTTAACTGTAAAATaGAGACCATATGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRSLTVK*RPYVPP
Trigger: TGGTGGAACATATGGTCTCCATTTTACAGTTAAGGA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGCTCATACTCTATTCTaGATTTACTTCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCAHTLF*IYFQTL
Trigger: GAGTGTTTGGAAGTAAATTCAGAATAGAGTATGAGC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGTACTGCTTCATCACTaGAAGTGTCATTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCVLLHH*KCHLFL
Trigger: TAGAAACAAATGACACTTTCAGTGATGAAGCAGTAC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTCTTCTTTTGCATGTTaGTTTTGTACCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHSSFAC*FCTSIS
Trigger: GGAAATGGAGGTACAAAATCAACATGCAAAAGAAGA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR TCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTCTTCTTTTGCATGTTaGTTTTGTACCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVSSFAC*FCTSIS
Trigger: GGAAATGGAGGTACAAAATCAACATGCAAAAGAAGA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATTCTCAGATAGATGCTaGTCCTTATTTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRFSDRC*SLFFHN
Trigger: ATTGTGGAAAAATAAGGAGCAGCATCTATCTGAGAA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTTCTCAGATAGATGCTaGTCCTTATTTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: SIIFLNCKMETICSTSFTFSDRC*SLFFHN
Trigger: ATTGTGGAAAAATAAGGAGCAGCATCTATCTGAGAA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR GCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTGACAAATATAAAAACTaGTATAGTAGGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPADKYKN*YSRAVF
Trigger: GAAGACTGCCCTACTATAGCAGTTTTTATATTTGTC...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTTTTACTTCCAATAGATaGTTCATCAAGAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCFTSNR*FIKRWV
Trigger: TACCCACCTCTTGATGAACCATCTATTGGAAGTAAA...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATTCTATATCCATCCTTaGCCTTTTTCTAACATTGAC +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRFYIHP*PFSNID
Trigger: GTCAATGTTAGAAAAAGGCCAAGGATGGATATAGAA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTATTTTGCTACTTTCTaGTACTGCTTCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPAYFATF*YCFITE
Trigger: TTCAGTGATGAAGCAGTACCAGAAAGTAGCAAAATA...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTAAGTTAATTTGGTTCTaGCAAGTAGATGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVKLIWF*QVDALP
Trigger: TGGAAGTGCATCTACTTGCCAGAACCAAATTAACTT...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATCAAGTTTGAATTCCTaGGAGAAGAAAAGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRSSLNS*EKKSLY
Trigger: GTAAAGACTTTTCTTCTCCCAGGAATTCAAACTTGA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR GCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTCAAGGTGTAGAACACTaGATATGTTATGCTATCATT +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCQGVEH*ICYAII
Trigger: AATGATAGCATAACATATGCAGTGTTCTACACCTTG...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTGGTTCATCAAGAGGTaGGTAAAAACTTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVWFIKR*VKTFNL
Trigger: CAAATTGAAAGTTTTTACCCACCTCTTGATGAACCA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CCA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTATCATTTATGCCAGATaGATTTCTGGAAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCIIYAR*ISGSRV
Trigger: AACTCTACTTCCAGAAATCCATCTGGCATAAATGAT...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS GCA 90 bp ACGAGCGCGGATACGGCGCCTGCGGTCGGCATGGGCTCCGGGACGTaGGCGCTCCCGGGAGCCACGCAGGCTGCCTTGGATGAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: TSADTAPAVGMGSGT*ALPGATQAALDEAG
Trigger: TCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCCCGGAGCCCATGCCGACCGCAGGCGCCGTATCCGCGCTCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CCA 90 bp TGGGCTCCGGGACGTGCGCGCTCCCGGGAGCCACGCAGGCTGCCTTaGATGAGGCGGGAGTGCGACTTGGGCGCTTGCCCGCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: WAPGRARSREPRRLP*MRRECDLGACPPPV
Trigger: AACTGGTGGCGGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCCCGGAGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS TCA 90 bp CTCCGGGACGTGCGCGCTCCCGGGAGCCACGCAGGCTGCCTTGGATaGGGCGGGAGTGCGACTTGGGCGCTTGCCCGCCACCAGTTATGT +
Preference number: 5 (lower is better)
Translates to: LRDVRAPGSHAGCLG*GGSATWALARHQLC
Trigger: ACATAACTGGTGGCGGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCCCGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS TCA 90 bp GAGGACTGCCACCAGGGGGCGCCGCAATCACCCCACCGCCCGCGCTaGATTCCAGCTCACAGCCGCCGTGCTGCCCGGGAAGAATATGCG +
Preference number: 5 (lower is better)
Translates to: EDCHQGAPQSPHRPR*IPAHSRRAAREEYA
Trigger: CGCATATTCTTCCCGGGCAGCACGGCGGCTGTGAGCTGGAATTCAGCGCGGGCGGTGGGGTGATTGCGGCGCCCCCTGGTGGCAGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS GCA 90 bp CAGCAGTTTCCACATCGGTCCGGCTCCTCAGGGCTGGGGCCGACGTaGAACCGCGTAACCGGGGCTGCTAGACGAGCGCGGATACGGCGC +
Preference number: 5 (lower is better)
Translates to: QQFPHRSGSSGLGPT*NRVTGAARRARIRR
Trigger: GCGCCGTATCCGCGCTCGTCTAGCAGCCCCGGTTACGCGGTTGCACGTCGGCCCCAGCCCTGAGGAGCCGGACCGATGTGGAAACTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000494804.1
CDS GCA 90 bp GCAATCACCCCACCGCCCGCGCTGAATTCCAGCTCACAGCCGCCGTaGTGCCCGGGAAGAATATGCGCTTGCCATACAGCGTACTCGCCG +
Preference number: 5 (lower is better)
Translates to: AITPPPALNSSSQPP*CPGRICACHTAYSP
Trigger: CGGCGAGTACGCTGTATGGCAAGCGCATATTCTTCCCGGGCAGCACGGCGGCTGTGAGCTGGAATTCAGCGCGGGCGGTGGGGTGATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS GCA 90 bp ATCACCCCACCGCCCGCGCTGAATTCCAGCTCACAGCCGCCGTGCTaGCCGGGAAGAATATGCGCTTGCCATACAGCGTACTCGCCGCTT +
Preference number: 5 (lower is better)
Translates to: ITPPPALNSSSQPPC*PGRICACHTAYSPL
Trigger: AAGCGGCGAGTACGCTGTATGGCAAGCGCATATTCTTCCCGGGCAGCACGGCGGCTGTGAGCTGGAATTCAGCGCGGGCGGTGGGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CAA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGGCCACGCAGGCTGCCTaGGATGAGGCGGGAGTGCGA +
Preference number: 5 (lower is better)
Translates to: DALPQDLEGESDVEASLLATQAA*DEAGVR
Trigger: TCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGC...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCAAGGCGGGAGTGCGACTaGGGCGCTTGCCCGCCACCA +
Preference number: 5 (lower is better)
Translates to: CKQPELGSKLIWFWQVDARRECD*GACPPP
Trigger: TGGTGGCGGGCAAGCGCCCAAGTCGCACTCCCGCCT...TGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGTGTGGAGGCTGCTTCTaGGACTCAACTGCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: DALPQDLEGESDVEASLLCGGCF*DSTAFR
Trigger: CCTGAAAGCAGTTGAGTCCAAGAAGCAGCCTCCACA...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGCTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAA +
Preference number: 5 (lower is better)
Translates to: DALPQDLEGESDVEASLLLLSLL*LLFTRE
Trigger: TTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAG...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATGGGAAGAATATGCGCTaGCCATACAGCGTACTCGCC +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHGKNMR*PYSVLA
Trigger: GGCGAGTACGCTGTATGGCAAGCGCATATTCTTCCC...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATCGCCTTGTGAAAGGCTaGGTCCTGGAGTTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHRLVKG*VLELLS
Trigger: AGACAACAACTCCAGGACCAAGCCTTTCACAAGGCG...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS CCA 90 bp TGGTTTGTCCCCTTCCTAGCACATGTAGCCTCAAGTTTGAATTCCTaGGAGAAGAAAAGTCTTTACATCTGTGATGTGGGAGGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: WFVPFLAHVASSLNS*EKKSLYICDVGGCS
Trigger: GGAACAACCTCCCACATCACAGATGTAAAGACTTTTCTTCTCCCAGGAATTCAAACTTGAGGCTACATGTGCTAGGAAGGGGACAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp GATGTAGAGGCCAGCCTCTTGTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCAGTAGAAATTGCAGATaGGCTCACCCAATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: DVEASLLSLLLLLFTREVSRNCR*AHPISV
Trigger: AACAGAAATTGGGTGAGCCAATCTGCAATTTCTACT...GACTTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAGGCTGGCCTCTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTGTGCGACTTGGGCGCTaGCCCGCCACCAGTTATGTA +
Preference number: 5 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVVRLGR*PATSYV
Trigger: TACATAACTGGTGGCGGGCAAGCGCCCAAGTCGCAC...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTAGTTATTGTCTGAGTTaGTGTCCACAGGCTCATTCT +
Preference number: 5 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLSYCLS*CPQAHS
Trigger: AGAATGAGCCTGTGGACACAAACTCAGACAATAACT...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGCTCTTCTTTTGCATGTaGATTTTGTACCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: DALPQDLEGESDVEASLLLFFCM*ILYLHF
Trigger: GAAATGGAGGTACAAAATCAACATGCAAAAGAAGAG...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GATGCACTTCCACAAGATTTGGAAGGTGAGAGTGATGTAGAGGCCAGCCTCTTGATCACTACACACCGATaGGAATGGTTAAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: DALPQDLEGESDVEASLLITTHR*EWLKRK
Trigger: TTTCCTTTTTAACCATTCCAATCGGTGTGTAGTGAT...CAAGAGGCTGGCCTCTACATCACTCTCACCTTCCAAATCTTGTGGAAGTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTAGGGATTTCATCTGTTaGACTCAGGTTGGTTACAGA +
Preference number: 5 (lower is better)
Translates to: VPSVASVYKGSHGNMASIRDFIC*TQVGYR
Trigger: TCTGTAACCAACCTGAGTCAAACAGATGAAATCCCT...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000409330.5
CDS-3UTR CAA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTGTGGAGGCTGCTTCTaGGACTCAACTGCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPACGGCF*DSTAFR
Trigger: CCTGAAAGCAGTTGAGTCCAAGAAGCAGCCTCCACA...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTCGCCTTGTGAAAGGCTaGGTCCTGGAGTTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPARLVKG*VLELLS
Trigger: AGACAACAACTCCAGGACCAAGCCTTTCACAAGGCG...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGACGCCTTGTGAAAGGCTaGGTCCTGGAGTTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRRLVKG*VLELLS
Trigger: AGACAACAACTCCAGGACCAAGCCTTTCACAAGGCG...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCTGAAGCCATTTTGTTaGGATCACCAGAGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: VPSVASVYKGSHGNMASILKPFC*DHQSLG
Trigger: ACCTAAACTCTGGTGATCCAAACAAAATGGCTTCAG...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TCCACCTGCAAGCAGCCAGAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTACTGAAGCCATTTTGTTaGGATCACCAGAGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: STCKQPELGSKLIWFWQVLKPFC*DHQSLG
Trigger: ACCTAAACTCTGGTGATCCAAACAAAATGGCTTCAG...TACTTGCCAGAACCAAATTAACTTACTTCCAAGTTCTGGCTGCTTGCAGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTCTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SVYKGSHGNMASIPHCSILLSLL*LLFTRE
Trigger: TTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAG...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTGTGGAGGCTGCTTCTaGGACTCAACTGCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVCGGCF*DSTAFR
Trigger: CCTGAAAGCAGTTGAGTCCAAGAAGCAGCCTCCACA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTTATTAGAGCTTGTTTaGCAGGACTCCTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: VPSVASVYKGSHGNMASILLELV*QDSFTV
Trigger: CACTGTAAAGGAGTCCTGCAAAACAAGCTCTAATAA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GAAATTGCAGATTGGCTCACCCAATTTCTGTTCCCTAGGAAGGCTGAGAAGCTTAAGACGTTTCTATTCTaGCTGATTTGCATGAAGACA +
Preference number: 5 (lower is better)
Translates to: EIADWLTQFLFPRKAEKLKTFLF*LICMKT
Trigger: TGTCTTCATGCAAATCAGCAAGAATAGAAACGTCTT...AAGCTTCTCAGCCTTCCTAGGGAACAGAAATTGGGTGAGCCAATCTGCAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTGGCCTTTTTCTAACATaGACATCTTCCTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VASVYKGSHGNMASIPHCGLFLT*TSSSCF
Trigger: AAAACAGGAGGAAGATGTCAATGTTAGAAAAAGGCC...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTATTTTGCATGTTGATTTaGTACCTCCATTTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLFCMLI*YLHFLP
Trigger: AGGCAGGAAATGGAGGTACAAAATCAACATGCAAAA...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTAAAACTAAACCCATGTTaGATGAAGTCTCCACATGGT +
Preference number: 5 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLKLNPC*MKSPHG
Trigger: ACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp GTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTAGTAGAAATTGCAGATaGGCTCACCCAATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: VASVYKGSHGNMASIPHCSRNCR*AHPISV
Trigger: AACAGAAATTGGGTGAGCCAATCTGCAATTTCTACT...ACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTTCCACCAGCTTCACTaGGTAATTATGATACATGGC +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHFHQLH*VIMIHG
Trigger: GCCATGTATCATAATTACCAAGTGAAGCTGGTGGAA...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTGGAGCATATCCATTATaGACTGAATCCATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VPSVASVYKGSHGNMASIGAYPL*TESISS
Trigger: AGAAGAAATGGATTCAGTCAATAATGGATATGCTCC...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTGTTCACTGGGGCGCTaGGCATTAGTTTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDCSLGR*ALVFHQ
Trigger: TTGATGAAAAACTAATGCCAAGCGCCCCAGTGAACA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATAAACTAAACCCATGTTaGATGAAGTCTCCACATGGT +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHKLNPC*MKSPHG
Trigger: ACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp CTATGCAGCTACAGTAATTCAAGGCAGTATGGTATGAGTGAGTGCAAGGATGGAATCACTACACACCGATaGGAATGGTTAAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LCSYSNSRQYGMSECKDGITTHR*EWLKRK
Trigger: TTTCCTTTTTAACCATTCCAATCGGTGTGTAGTGAT...TCCATCCTTGCACTCACTCATACCATACTGCCTTGAATTACTGTAGCTGCATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000396252.6
CDS-3UTR CAA 90 bp GTCCCTTCTGTTGCTTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTTATCCGACAAGAGACTaGCATCTAGAATGTATAAAG +
Preference number: 5 (lower is better)
Translates to: VPSVASVYKGSHGNMASIYPTRD*HLECIK
Trigger: CTTTATACATTCTAGATGCAAGTCTCTTGTCGGATA...AATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAAGCAACAGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTTCATCAACTGACACGCCTTGTGAAAGGCTTGGTCCTGGAGTTGTTGTCTTTATATCCGACAAGAGACTaGCATCTAGAATGTATAAAG +
Preference number: 5 (lower is better)
Translates to: FHQLTRLVKGLVLELLSLYPTRD*HLECIK
Trigger: CTTTATACATTCTAGATGCAAGTCTCTTGTCGGATA...TAAAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTATTGCAGGTATTCCTTaGGAATCTGTTAGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SVYKGSHGNMASIPHCSIIAGIP*ESVSVV
Trigger: AACCACACTAACAGATTCCAAAGGAATACCTGCAAT...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTGTAGTTTCGTGCGTTaGCAGTTTCTTAAATTGCAG +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHCSFVR*QFLKLQ
Trigger: CTGCAATTTAAGAAACTGCAAACGCACGAAACTACA...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTTGTTCACTGGGGCGCTaGGCATTAGTTTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: SIIFLNCKMETICSTSFTCSLGR*ALVFHQ
Trigger: TTGATGAAAAACTAATGCCAAGCGCCCCAGTGAACA...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTTATTCCTGTATCAACAACACACGTTCCCGGAGCCAAAAAGAAATTATGTTCTAGTTATTGTCTGAGTTaGTGTCCACAGGCTCATTCT +
Preference number: 5 (lower is better)
Translates to: VIPVSTTHVPGAKKKLCSSYCLS*CPQAHS
Trigger: AGAATGAGCCTGTGGACACAAACTCAGACAATAACT...AGAACATAATTTCTTTTTGGCTCCGGGAACGTGTGTTGTTGATACAGGAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTCTGGTTTTGTGTCCTaGAATAACTGTTCCAATACT +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHSGFVS*NNCSNT
Trigger: AGTATTGGAACAGTTATTCAAGGACACAAAACCAGA...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATTTCTGGTTTTGTGTCCTaGAATAACTGTTCCAATACT +
Preference number: 5 (lower is better)
Translates to: SVYKGSHGNMASIPHCSISGFVS*NNCSNT
Trigger: AGTATTGGAACAGTTATTCAAGGACACAAAACCAGA...AATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTAGTCATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGAGGCCTTTTTCTAACATaGACATCTTCCTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VVMKITANPISASGIGLRGLFLT*TSSSCF
Trigger: AAAACAGGAGGAAGATGTCAATGTTAGAAAAAGGCC...TCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTCATAGTGAGTCTTCCTaGAGTTCACGTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SIIFLNCKMETICSTSFTHSESS*SSRFFP
Trigger: TGGGAAGAAACGTGAACTCAAGGAAGACTCACTATG...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATCTCTTCTTTTGCATGTaGATTTTGTACCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHLFFCM*ILYLHF
Trigger: GAAATGGAGGTACAAAATCAACATGCAAAAGAAGAG...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTACTCTTGTCCCTTCTGTaGCTTCTGTTTACAAGGGAA +
Preference number: 5 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLLLSLL*LLFTRE
Trigger: TTCCCTTGTAAACAGAAGCAACAGAAGGGACAAGAG...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTTCCACCAGCTTCACTaGGTAATTATGATACATGGC +
Preference number: 5 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDFHQLH*VIMIHG
Trigger: GCCATGTATCATAATTACCAAGTGAAGCTGGTGGAA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTCTGTTTACAAGGGAAGTCATGGAAATATGGCCTCCATTCCTCACTGTTCCATATCACTACACACCGATaGGAATGGTTAAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: FCLQGKSWKYGLHSSLFHITTHR*EWLKRK
Trigger: TTTCCTTTTTAACCATTCCAATCGGTGTGTAGTGAT...ATGGAACAGTGAGGAATGGAGGCCATATTTCCATGACTTCCCTTGTAAACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTGTTCACTGGGGCGCTaGGCATTAGTTTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHCSLGR*ALVFHQ
Trigger: TTGATGAAAAACTAATGCCAAGCGCCCCAGTGAACA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GTAGTCATGAAAATCACCGCCAATCCAATTTCTGCTTCAGGAATAGGTCTAAGAAAGACGTTTCTATTCTaGCTGATTTGCATGAAGACA +
Preference number: 5 (lower is better)
Translates to: VVMKITANPISASGIGLRKTFLF*LICMKT
Trigger: TGTCTTCATGCAAATCAGCAAGAATAGAAACGTCTT...TCTTAGACCTATTCCTGAAGCAGAAATTGGATTGGCGGTGATTTTCATGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATCATAGTGAGTCTTCCTaGAGTTCACGTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHHSESS*SSRFFP
Trigger: TGGGAAGAAACGTGAACTCAAGGAAGACTCACTATG...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTACCACTGAAGCCATTTaGTTTGGATCACCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPATTEAI*FGSPEF
Trigger: AAACTCTGGTGATCCAAACAAAATGGCTTCAGTGGT...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATAGTAGAAATTGCAGATaGGCTCACCCAATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDSRNCR*AHPISV
Trigger: AACAGAAATTGGGTGAGCCAATCTGCAATTTCTACT...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTAGGGATTTCATCTGTTaGACTCAGGTTGGTTACAGA +
Preference number: 5 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVRDFIC*TQVGYR
Trigger: TCTGTAACCAACCTGAGTCAAACAGATGAAATCCCT...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265433.8
ENST00000409330.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTCCATTTTGGAGACTTaGATTTCTTTTGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDSILET*ISFGLS
Trigger: TGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGGA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AGACCATATGTTCCACCAGCTTCACTTGGTAATTATGATACATGGCTATTAAGATTATTAGAGCTTGTTTaGCAGGACTCCTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: RPYVPPASLGNYDTWLLRLLELV*QDSFTV
Trigger: CACTGTAAAGGAGTCCTGCAAAACAAGCTCTAATAA...TCTTAATAGCCATGTATCATAATTACCAAGTGAAGCTGGTGGAACATATGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATAGTTATTGTCTGAGTTaGTGTCCACAGGCTCATTCT +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHSYCLS*CPQAHS
Trigger: AGAATGAGCCTGTGGACACAAACTCAGACAATAACT...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATTTTGCATGTTGATTTaGTACCTCCATTTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLFCMLI*YLHFLP
Trigger: AGGCAGGAAATGGAGGTACAAAATCAACATGCAAAA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATCTGAAGCCATTTTGTTaGGATCACCAGAGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHLKPFC*DHQSLG
Trigger: ACCTAAACTCTGGTGATCCAAACAAAATGGCTTCAG...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTACCACTGAAGCCATTTaGTTTGGATCACCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCTTEAI*FGSPEF
Trigger: AAACTCTGGTGATCCAAACAAAATGGCTTCAGTGGT...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATACCACTGAAGCCATTTaGTTTGGATCACCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHTTEAI*FGSPEF
Trigger: AAACTCTGGTGATCCAAACAAAATGGCTTCAGTGGT...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTAAGTTAATTTGGTTCTGGCAAGTAGATGCACTTCCACAAGATTATCCGACAAGAGACTaGCATCTAGAATGTATAAAG +
Preference number: 5 (lower is better)
Translates to: ELGSKLIWFWQVDALPQDYPTRD*HLECIK
Trigger: CTTTATACATTCTAGATGCAAGTCTCTTGTCGGATA...ATCTTGTGGAAGTGCATCTACTTGCCAGAACCAAATTAACTTACTTCCAAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTTCACTGGAGCATATCCATTATaGACTGAATCCATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SIIFLNCKMETICSTSFTGAYPL*TESISS
Trigger: AGAAGAAATGGATTCAGTCAATAATGGATATGCTCC...AGTGAAGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTATCCATTTTGGAGACTTaGATTTCTTTTGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLSILET*ISFGLS
Trigger: TGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGGA...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTTATTAGAGCTTGTTTaGCAGGACTCCTTTACAGTG +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHLLELV*QDSFTV
Trigger: CACTGTAAAGGAGTCCTGCAAAACAAGCTCTAATAA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAACTAAACCCATGTTTGATGAAGTCTCCACATGGTCTTCAGTTTCTAGTACTAAAGACGTTTCTATTCTaGCTGATTTGCATGAAGACA +
Preference number: 5 (lower is better)
Translates to: KLNPCLMKSPHGLQFLVLKTFLF*LICMKT
Trigger: TGTCTTCATGCAAATCAGCAAGAATAGAAACGTCTT...TAGTACTAGAAACTGAAGACCATGTGGAGACTTCATCAAACATGGGTTTAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTTTTTGCATGTTGATTTaGTACCTCCATTTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCFCMLI*YLHFLP
Trigger: AGGCAGGAAATGGAGGTACAAAATCAACATGCAAAA...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp ATCTGTCCATTATATTCCTTAACTGTAAAATGGAGACCATATGTTCCACCAGCTCTCTTCTTTTGCATGTaGATTTTGTACCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: ICPLYSLTVKWRPYVPPALFFCM*ILYLHF
Trigger: GAAATGGAGGTACAAAATCAACATGCAAAAGAAGAG...AGCTGGTGGAACATATGGTCTCCATTTTACAGTTAAGGAATATAATGGACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp TTGACAAATATAAAAACTGCTATAGTAGGGCAGTCTTCCTTAGAAAGGGATTGTGGAGCATATCCATTATaGACTGAATCCATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LTNIKTAIVGQSSLERDCGAYPL*TESISS
Trigger: AGAAGAAATGGATTCAGTCAATAATGGATATGCTCC...ACAATCCCTTTCTAAGGAAGACTGCCCTACTATAGCAGTTTTTATATTTGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp AAAAATACTGACAACACCAATATTTGTAAAGACAGGAGGTACCAGAACTCTCATTCCATTTTGGAGACTTaGATTTCTTTTGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: KNTDNTNICKDRRYQNSHSILET*ISFGLS
Trigger: TGAAAGGCCAAAAGAAATCAAAGTCTCCAAAATGGA...ATGAGAGTTCTGGTACCTCCTGTCTTTACAAATATTGGTGTTGTCAGTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS-3UTR CAA 90 bp CCATTTCATCAACTAATATGCCCTGTCAATTCTACTTCTAAAGTATCCCATGTTTCTGGTTTTGTGTCCTaGAATAACTGTTCCAATACT +
Preference number: 5 (lower is better)
Translates to: PFHQLICPVNSTSKVSHVSGFVS*NNCSNT
Trigger: AGTATTGGAACAGTTATTCAAGGACACAAAACCAGA...AACATGGGATACTTTAGAAGTAGAATTGACAGGGCATATTAGTTGATGAAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000409330.5
CDS CCA 72 bp GCTAGACGAGCGCGGATACGGCGCCTGCGGTCGGCATaGGCTCCGGGACGTGCGCGCTCCCGGGAGCCACGC +
Preference number: 6 (lower is better)
Translates to: ARRARIRRLRSA*APGRARSREPR
Trigger: GCGTGGCTCCCGGGAGCGCGCACGTCCCGGAGCCCATGCCGACCGCAGGCGCCGTATCCGCGCTCGTCTAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS TCA 72 bp GTGCGCGCTCCCGGGAGCCACGCAGGCTGCCTTGGATaGGGCGGGAGTGCGACTTGGGCGCTTGCCCGCCAC +
Preference number: 6 (lower is better)
Translates to: VRAPGSHAGCLG*GGSATWALARH
Trigger: GTGGCGGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS GCA 72 bp GATACGGCGCCTGCGGTCGGCATGGGCTCCGGGACGTaGGCGCTCCCGGGAGCCACGCAGGCTGCCTTGGAT +
Preference number: 6 (lower is better)
Translates to: DTAPAVGMGSGT*ALPGATQAALD
Trigger: ATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCCCGGAGCCCATGCCGACCGCAGGCGCCGTATC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CCA 72 bp GGACGTGCGCGCTCCCGGGAGCCACGCAGGCTGCCTTaGATGAGGCGGGAGTGCGACTTGGGCGCTTGCCCG +
Preference number: 6 (lower is better)
Translates to: GRARSREPRRLP*MRRECDLGACP
Trigger: CGGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CAA 72 bp GGGACGTGCGCGCTCCCGGGAGCCACGCAGGCTGCCTaGGATGAGGCGGGAGTGCGACTTGGGCGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: GTCALPGATQAA*DEAGVRLGRLP
Trigger: GGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CAA 90 bp ATGGGCTCCGGGACGTGCGCGCTCCCGGGAGCCACGCAGGCTGCCTaGGATGAGGCGGGAGTGCGACTTGGGCGCTTGCCCGCCACCAGT +
Preference number: 6 (lower is better)
Translates to: MGSGTCALPGATQAA*DEAGVRLGRLPATS
Trigger: ACTGGTGGCGGGCAAGCGCCCAAGTCGCACTCCCGCCTCATCCAAGGCAGCCTGCGTGGCTCCCGGGAGCGCGCACGTCCCGGAGCCCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS TCA 72 bp CACCAGGGGGCGCCGCAATCACCCCACCGCCCGCGCTaGATTCCAGCTCACAGCCGCCGTGCTGCCCGGGAA +
Preference number: 6 (lower is better)
Translates to: HQGAPQSPHRPR*IPAHSRRAARE
Trigger: TTCCCGGGCAGCACGGCGGCTGTGAGCTGGAATTCAGCGCGGGCGGTGGGGTGATTGCGGCGCCCCCTGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS GCA 72 bp CCACATCGGTCCGGCTCCTCAGGGCTGGGGCCGACGTaGAACCGCGTAACCGGGGCTGCTAGACGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: PHRSGSSGLGPT*NRVTGAARRAR
Trigger: CCGCGCTCGTCTAGCAGCCCCGGTTACGCGGTTGCACGTCGGCCCCAGCCCTGAGGAGCCGGACCGATGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265433.8
ENST00000396252.6
ENST00000494804.1
CDS GCA 72 bp CCACCGCCCGCGCTGAATTCCAGCTCACAGCCGCCGTaGTGCCCGGGAAGAATATGCGCTTGCCATACAGCG +
Preference number: 6 (lower is better)
Translates to: PPPALNSSSQPP*CPGRICACHTA
Trigger: CGCTGTATGGCAAGCGCATATTCTTCCCGGGCAGCACGGCGGCTGTGAGCTGGAATTCAGCGCGGGCGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS GCA 72 bp CCGCCCGCGCTGAATTCCAGCTCACAGCCGCCGTGCTaGCCGGGAAGAATATGCGCTTGCCATACAGCGTAC +
Preference number: 6 (lower is better)
Translates to: PPALNSSSQPPC*PGRICACHTAY
Trigger: GTACGCTGTATGGCAAGCGCATATTCTTCCCGGGCAGCACGGCGGCTGTGAGCTGGAATTCAGCGCGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409330.5
CDS GCA 72 bp CTTGGGCGCTTGCCCGCCACCAGTTATGTAGTTTCGTaGGTTTGCAGTTTCTTAAATTGCAGGTATTCCTTT +
Preference number: 6 (lower is better)
Translates to: LGRLPATSYVVS*VCSFLNCRYSF
Trigger: AAAGGAATACCTGCAATTTAAGAAACTGCAAACGCACGAAACTACATAACTGGTGGCGGGCAAGCGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS GCA 72 bp CGCTTGCCCGCCACCAGTTATGTAGTTTCGTGCGTTTaGAGTTTCTTAAATTGCAGGTATTCCTTTGGAATC +
Preference number: 6 (lower is better)
Translates to: RLPATSYVVSCV*SFLNCRYSFGI
Trigger: GATTCCAAAGGAATACCTGCAATTTAAGAAACTGCAAACGCACGAAACTACATAACTGGTGGCGGGCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CAA 72 bp GCGCTTGCCCGCCACCAGTTATGTAGTTTCGTGCGTTaGCAGTTTCTTAAATTGCAGGTATTCCTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: ALARHQLCSFVR*QFLKLQVFLWN
Trigger: ATTCCAAAGGAATACCTGCAATTTAAGAAACTGCAAACGCACGAAACTACATAACTGGTGGCGGGCAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CAA 72 bp GATTTCCACATCCTGGAGGTCACCACATCTGAGTTCTaGCCTCTACAATATTTCATTCAACTGATCCTCTAT +
Preference number: 6 (lower is better)
Translates to: DFHILEVTTSEF*PLQYFIQLILY
Trigger: ATAGAGGATCAGTTGAATGAAATATTGTAGAGGCAAGAACTCAGATGTGGTGACCTCCAGGATGTGGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474821.1
CDS TCA 72 bp TTTGAATTCCTGGGAGAAGAAAAGTCTTTACATCTGTaGTGTGGGAGGTTGTTCCAGGGAACATCATGTTTT +
Preference number: 6 (lower is better)
Translates to: FEFLGEEKSLHL*CGRLFQGTSCF
Trigger: AAAACATGATGTTCCCTGGAACAACCTCCCACATCACAGATGTAAAGACTTTTCTTCTCCCAGGAATTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396252.6
CDS CAA 90 bp CATCTTAGAGATTTCCACATCCTGGAGGTCACCACATCTGAGTTCTaGCCTCTACAATATTTCATTCAACTGATCCTCTATATTTTCAAT +
Preference number: 6 (lower is better)
Translates to: HLRDFHILEVTTSEF*PLQYFIQLILYIFN
Trigger: ATTGAAAATATAGAGGATCAGTTGAATGAAATATTGTAGAGGCAAGAACTCAGATGTGGTGACCTCCAGGATGTGGAAATCTCTAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474821.1