RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NBEAL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144426

Ensembl transcript IDs: ENST00000414576.6, ENST00000434469.1, ENST00000449802.5, ENST00000460355.1, ENST00000460416.2, ENST00000463830.2, ENST00000478884.5, ENST00000483147.2, ENST00000492870.1, ENST00000497505.5, ENST00000681967.1, ENST00000682077.1, ENST00000682108.1, ENST00000682333.1, ENST00000682630.1, ENST00000682787.1, ENST00000683001.1, ENST00000683091.1, ENST00000683338.1, ENST00000683650.1, ENST00000683927.1, ENST00000683969.1, ENST00000684091.1, ENST00000684709.1

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCCAGTaGCTGAGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAAT +
Preference number: 1 (lower is better)
Translates to: AVLMKHVTNMALIVQ*LRILPDELTQEVSN
Trigger: ATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCTCAGTCACTGGACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
3UTR-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGAGATGTGGTTAAAGTaGCAAAGCAATAAATCAGGT +
Preference number: 2 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKEMWLK*QSNKSG
Trigger: ACCTGATTTATTGCTTTGTCACTTTAACCACATCTC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
3UTR-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACAACATTGCAGAGAGTaGAGAGATGTGGTTAAAGTG +
Preference number: 3 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKQHCRE*RDVVKV
Trigger: CACTTTAACCACATCTCTCAACTCTCTGCAATGTTG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
3UTR TCA 72 bp ATGAAGCACGTAACTAACATGGCTTTGATTGTCCAGTaGCTGAGAATCTTACCAGATGAATTAACGCAGGAA +
Preference number: 3 (lower is better)
Translates to: MKHVTNMALIVQ*LRILPDELTQE
Trigger: TTCCTGCGTTAATTCATCTGGTAAGATTCTCAGTCACTGGACAATCAAAGCCATGTTAGTTACGTGCTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCAGCTGAAATCTGGCTaGGCCGCTTGCTCGATCCCC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVQLKSG*AACSIP
Trigger: GGGGATCGAGCAAGCGGCTCAGCCAGATTTCAGCTG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACGGCAGCCGTCTAACTaGTTCCCTCGACCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKRQPSN*FPRPLP
Trigger: GGGAAGGGGTCGAGGGAAGCAGTTAGACGGCTGCCG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACAGCTGAAATCTGGCTaGGCCGCTTGCTCGATCCCC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQQLKSG*AACSIP
Trigger: GGGGATCGAGCAAGCGGCTCAGCCAGATTTCAGCTG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCGGTGGCACCACGGGTaGAGCACTGGATTGAAACCT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVRWHHG*STGLKP
Trigger: AGGTTTCAATCCAGTGCTTCACCCGTGGTGCCACCG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCTGAGCTCACTGACTaGCTCCCCAAGGAACCATGG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSELTD*LPKEPW
Trigger: CCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACCTCCCGGGTTTAAGTaGTTCTCCTGCGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQPPGFK*FSCAAQ
Trigger: CTGAGCAGCGCAGGAGAATCACTTAAACCCGGGAGG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTGGAGTGCAGTAGCGTaGTCTCAGGTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVWSAVA*SQVTAT
Trigger: GGTTGCAGTGACCTGAGATCACGCTACTGCACTCCA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGGCCATTGTCAGGATTaGTCGAGTCACGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVGHCQD*SSHGSD
Trigger: GTCACTCCCGTGACTCGAGCAATCCTGACAATGGCC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGTGATCTCAGGTCACTaGAACCTCCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKVISGH*NLHLPG
Trigger: ACCCGGGAGGTGGAGGTTGCAGTGACCTGAGATCAC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGGTGGATCTGGGATTTaGGATGGTGGAGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVGGSGI*DGGGVV
Trigger: CACCACTCCTCCACCATCCCAAATCCCAGATCCACC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCGAGAAAGCTGACCTaGACGCATCTCAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSRKLT*THLSRL
Trigger: AAGCCTGCTGAGATGCGTTCAGGTCAGCTTTCTCGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGCCCAAAATCCCAACTaGAGTGTGGTCACCCTCTAC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVAQNPN*SVVTLY
Trigger: GTAGAGGGTGACCACACTTCAGTTGGGATTTTGGGC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCTCGAGTCACGGGAGTaGCATAAGGGTGAACAGACT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLESRE*HKGEQT
Trigger: AGTCTGTTCACCCTTATGTCACTCCCGTGACTCGAG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATGCCTCTACTGCAGCTaGTCCCCTCTGTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTCLYCS*SPLFIA
Trigger: GGCTATAAACAGAGGGGACCAGCTGCAGTAGAGGCA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTCTCCAGCTGAAATCTaGCTGAGCCGCTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVSPAEI*LSRLLD
Trigger: ATCGAGCAAGCGGCTCAGCCAGATTTCAGCTGGAGA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAATGGTGGAGGAGTGGTaGTTCTTTGCCCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTMVEEW*FFAQLN
Trigger: GTTCAGCTGGGCAAAGAACCACCACTCCTCCACCAT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGGGATGGTGGAGGAGTaGTGGTTCTTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKGMVEE*WFFAQL
Trigger: CAGCTGGGCAAAGAACCACCACTCCTCCACCATCCC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGACCCTCCAGAGATGTaGGACACCCCCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKDPPEM*DTPIHC
Trigger: ACAGTGAATGGGGGTGTCCCACATCTCTGGAGGGTC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAGACTCTACTGGGGATaGTGTGCTAGGCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTRLYWG*CARQTV
Trigger: GACAGTCTGCCTAGCACACCATCCCCAGTAGAGTCT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCACGGGTGAAGCACTaGATTGAAACCTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPRVKH*IETSHH
Trigger: GTGATGGGAGGTTTCAATCCAGTGCTTCACCCGTGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCAAACCTTCCACTCTaGAGTTGGATGTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSNLPL*SWMWRV
Trigger: CACCCTCCACATCCAACTTCAGAGTGGAAGGTTTGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATGTCTAGCTCAGTGCTaGTGCCGACACTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQCLAQC*CRHSVP
Trigger: AGGTACTGAGTGTCGGCATCAGCACTGAGCTAGACA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCACAGCTGAAATCTGGCTaGGCCGCTTGCTCGATCCCC +
Preference number: 4 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSQLKSG*AACSIP
Trigger: GGGGATCGAGCAAGCGGCTCAGCCAGATTTCAGCTG...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTTCAGTTTCTCCAGCTaGAATCTGGCTGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVFSFSS*NLAEPL
Trigger: AAGCGGCTCAGCCAGATTTCAGCTGGAGAAACTGAA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATTCAGTTTCTCCAGCTaGAATCTGGCTGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTFSFSS*NLAEPL
Trigger: AAGCGGCTCAGCCAGATTTCAGCTGGAGAAACTGAA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCAAATGATGTCCGATaGGGGGTAATGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPNDVR*GVMGEE
Trigger: CTCTTCTCCCATTACCCCTCATCGGACATCATTTGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAATAACAGATCCTAGCTaGCCCTCCAGAGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTITDPS*PSRDVG
Trigger: TCCCACATCTCTGGAGGGTCAGCTAGGATCTGTTAT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGTTGAGTGCCTCTACTaGAGCTGGTCCCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQVECLY*SWSPLF
Trigger: AAACAGAGGGGACCAGCTGCAGTAGAGGCACTCAAC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATCTCCAGCTGAAATCTaGCTGAGCCGCTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSPAEI*LSRLLD
Trigger: ATCGAGCAAGCGGCTCAGCCAGATTTCAGCTGGAGA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATGGGATTTGGGATGGTaGAGGAGTGGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTWDLGW*RSGGSL
Trigger: CAAAGAACCACCACTCCTCCACCATCCCAAATCCCA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGGGAGAAGAGAAAGGTaGATCTGGGATTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVGRRER*IWDLGW
Trigger: CCATCCCAAATCCCAGATCCACCTTTCTCTTCTCCC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGCTAGGCAGACTGTCTaGCACTTGACTTCCACTATC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTARQTV*HLTSTI
Trigger: GATAGTGGAAGTCAAGTGCCAGACAGTCTGCCTAGC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGACCCCCGCAGAATTTaGATAGTGAGTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTDPRRI*IVSTIV
Trigger: CACTATGGTACTCACTATTCAAATTCTGCGGGGGTC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGACCCCCGCAGAATTTaGATAGTGAGTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVDPRRI*IVSTIV
Trigger: CACTATGGTACTCACTATTCAAATTCTGCGGGGGTC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTGTCTAGCTCAGTGCTaGTGCCGACACTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKCLAQC*CRHSVP
Trigger: AGGTACTGAGTGTCGGCATCAGCACTGAGCTAGACA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTCGAGAAAGCTGACCTaGACGCATCTCAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKSRKLT*THLSRL
Trigger: AAGCCTGCTGAGATGCGTTCAGGTCAGCTTTCTCGA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCAGCCAATCAGAGATaGAGATTTGCAGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSANQR*RFAGHG
Trigger: CCCATGACCTGCAAATCTTCATCTCTGATTGGCTGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGGTTCTTTGCCCAGCTaGACCAATGCAACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQGSLPS*TNATGS
Trigger: ACTTCCTGTTGCATTGGTTCAGCTGGGCAAAGAACC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGCCATGTCAGACTCTTaGCACTTCCAAGGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTAMSDS*HFQGLK
Trigger: TTTAAGCCCTTGGAAGTGTCAAGAGTCTGACATGGC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTGGTACGTAGGAGACTaGAGAGCACGTCCAAAATTC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVWYVGD*RARPKF
Trigger: GAATTTTGGACGTGCTCTTCAGTCTCCTACGTACCA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAGCAGTAAGAAAAGCTaGCCTCTGGTTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKSSKKS*PLVGLV
Trigger: TACCAGCCCAACCAGAGGTCAGCTTTTCTTACTGCT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGAAGAAAGTCCTGTATaGTCAGCACTAGTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVEESPV*SALVGR
Trigger: CCTTCCGACTAGTGCTGATCATACAGGACTTTCTTC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTTGAGTGCCTCTACTaGAGCTGGTCCCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVECLY*SWSPLF
Trigger: AAACAGAGGGGACCAGCTGCAGTAGAGGCACTCAAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAATAGAAAACGTTGAGTaGCTCTACTGCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTIENVE*LYCSWS
Trigger: GGACCAGCTGCAGTAGAGGCACTCAACGTTTTCTAT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGTCCCTGAAACACCTTaGAGTTCTGTAGCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVVPETP*SSVAVV
Trigger: TACGACTGCTACAGAACTGCAAGGTGTTTCAGGGAC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTGATTCTCCTGCGCTaGTCAGCCTCTCAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVILLR*SASQVA
Trigger: AGCTACTTGAGAGGCTGAGCAGCGCAGGAGAATCAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTTGCCCAAGCTGGAGTaGAGTAGCGTGATCTCAGGT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLPKLE*SSVISG
Trigger: ACCTGAGATCACGCTACTGCACTCCAGCTTGGGCAA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTGCCTCTACTGCAGCTaGTCCCCTCTGTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKCLYCS*SPLFIA
Trigger: GGCTATAAACAGAGGGGACCAGCTGCAGTAGAGGCA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TACAAAAGCAAGGCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCTCTCCAGCTGAAATCTaGCTGAGCCGCTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: YKSKAVLMKHVTNMALIVSPAEI*LSRLLD
Trigger: ATCGAGCAAGCGGCTCAGCCAGATTTCAGCTGGAGA...GACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGCCTTGCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCTCTGGATGCCATTCTaGCTTTCACTCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLWMPF*LSLWHF
Trigger: AAAGTGCCAGAGTGAAAGCCAGAATGGCATCCAGAG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGCCCACCGGCTACAATaGCTCCAAAGAGATGCAATA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKAHRLQ*LQRDAI
Trigger: TATTGCATCTCTTTGGAGCCATTGTAGCCGGTGGGC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAGAAAAGGCAGACCCTaGCCATTTCTGTATGGGAGG +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKRKGRP*PFLYGR
Trigger: CCTCCCATACAGAAATGGCCAGGGTCTGCCTTTTCT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAACTCTGAGGCCTTTGTaGAAGTCCATACGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTTLRPL*KSIRAN
Trigger: ATTGGCTCGTATGGACTTCCACAAAGGCCTCAGAGT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTTTAGTAGACTCTACTaGGGATGGTGTGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVFSRLY*GWCARQ
Trigger: CTGCCTAGCACACCATCCCCAGTAGAGTCTACTAAA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGGGCACTGGATACTGTaGTCAACAGGAAAGCGAAAT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTGHWIL*STGKRN
Trigger: ATTTCGCTTTCCTGTTGACCACAGTATCCAGTGCCC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGATGAAATCTTCAGCTaGTTTAGCCCATTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVDEIFS*FSPFRE
Trigger: CTCCCGAAATGGGCTAAATCAGCTGAAGATTTCATC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAACTCAGGGCTGCCTTaGGACATAAAAGAACGATAC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTNSGLP*DIKERY
Trigger: GTATCGTTCTTTTATGTCTCAAGGCAGCCCTGAGTT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACTTGTATGCTGCCTGTaGCAATGTGTTCTCCGATTA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTLVCCL*QCVLRL
Trigger: TAATCGGAGAACACATTGTCACAGGCAGCATACAAG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAATTTTCGAGAAAGCTaGCCTGAACGCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTNFRES*PERISA
Trigger: TGCTGAGATGCGTTCAGGTCAGCTTTCTCGAAAATT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAATTTTCGAGAAAGCTaGCCTGAACGCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVNFRES*PERISA
Trigger: TGCTGAGATGCGTTCAGGTCAGCTTTCTCGAAAATT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACCATCTGCCATTTTCTaGACACACTGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQPSAIF*THCRSW
Trigger: CCAGCTTCTACAGTGTGTTCAGAAAATGGCAGATGG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAATTCCAGTGGTGGCTaGCCCAGGGATTTTAATACT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTNSSGG*PRDFNT
Trigger: AGTATTAAAATCCCTGGGTCAGCCACCACTGGAATT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGCAACTCCATGGGAGTaGATAAGATTGCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKATPWE*IRLPWL
Trigger: CAACCAGGGCAATCTTATTCACTCCCATGGAGTTGC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGTGCTTGGCACCTTCTaGAGTAAAGCACCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKVLGTF*SKAPRV
Trigger: AACTCTTGGTGCTTTACTTCAGAAGGTGCCAAGCAC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAACTTGCTGTGATATTTaGTGTGCTGCATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKTCCDI*CAASGW
Trigger: CCAGCCAGATGCAGCACATCAAATATCACAGCAAGT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATCCTCCAAACTCCACTaGTCCGAAGACACATTAGCT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSSKLH*SEDTLA
Trigger: AGCTAATGTGTCTTCGGATCAGTGGAGTTTGGAGGA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAGACTGTCTGGCACTTaGCTTCCACTATCACTCATT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTRLSGT*LPLSLI
Trigger: AATGAGTGATAGTGGAAGTCAAGTGCCAGACAGTCT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAGCCCATATCATTTGTaGTGCTGCTTTCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSPYHL*CCFLCQ
Trigger: CTGACAGAGAAAGCAGCATCACAAATGATATGGGCT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCCACAAACAGCTCCTaGAATTTGAGCTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSTNSS*NLSLLS
Trigger: GGAAAGCAAGCTCAAATTTCAGGAGCTGTTTGTGGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGCTGGAGAAATTGCTTaGAAAGCATTCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQAGEIA*KAFLCP
Trigger: TGGGCAGAGGAATGCTTTGCAAGCAATTTCTCCAGC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGCCATTGCACAAACCTaGAAATTACCCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVAIAQT*KLPLPM
Trigger: CATTGGAAGGGGTAATTTGCAGGTTTGTGCAATGGC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGTGACACAAACACAATaGATAGGCAGTCGCATGGCT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQVTQTQ*IGSRMA
Trigger: AGCCATGCGACTGCCTATCCATTGTGTTTGTGTCAC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACAAAGAGCCTCTCTCTaGATGCCATTCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKQRASL*MPFWLS
Trigger: TGAAAGCCAGAATGGCATCCAGAGAGAGGCTCTTTG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATCCCAACTGAAGTGTaGTCACCCTCTACAGCCATA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQIPTEV*SPSTAI
Trigger: TATGGCTGTAGAGGGTGACCACACTTCAGTTGGGAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAGAGAAAGGTGGATCTaGGATTTGGGATGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKRERWI*DLGWWR
Trigger: CCTCCACCATCCCAAATCCCAGATCCACCTTTCTCT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAGAAAAGCTGACCTCTaGTTGGGCTGGTACGTAGGA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKRKADL*LGWYVG
Trigger: TCCTACGTACCAGCCCAACCAGAGGTCAGCTTTTCT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAGCCTCTCAAGTAGCTaGGACTATAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKSLSSS*DYRHVP
Trigger: TGGCACATGCCTATAGTCCCAGCTACTTGAGAGGCT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAATAATAGAAAACGTTaGGTGCCTCTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVNNRKR*VPLLQL
Trigger: CAGCTGCAGTAGAGGCACTCAACGTTTTCTATTATT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAACTCAGGGCTGCCTTaGGACATAAAAGAACGATAC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQNSGLP*DIKERY
Trigger: GTATCGTTCTTTTATGTCTCAAGGCAGCCCTGAGTT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTGTCTAGCTCAGTGCTaGTGCCGACACTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSCLAQC*CRHSVP
Trigger: AGGTACTGAGTGTCGGCATCAGCACTGAGCTAGACA...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCATCGAGAAAGCTGACCTaGACGCATCTCAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSSRKLT*THLSRL
Trigger: AAGCCTGCTGAGATGCGTTCAGGTCAGCTTTCTCGA...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCTTGACAAGCAAAATTaGCAAGGCTTGCTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLDKQN*QGLLLF
Trigger: GAACAACAGCAAGCCTTGTCAATTTTGCTTGTCAAG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGATCAGAGTTGCTACTaGGAAGGATATGTACCACTT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVDQSCY*EGYVPL
Trigger: AAGTGGTACATATCCTTCTCAGTAGCAACTCTGATC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACAATCCAATTGTCCCTaGAACACCTTGCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKQSNCP*NTLQFC
Trigger: ACAGAACTGCAAGGTGTTTCAGGGACAATTGGATTG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACACGACCAACATACCTaGATGGGTAATAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKHDQHT*MGNKGF
Trigger: GAAGCCTTTATTACCCATTCAGGTATGTTGGTCGTG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACAGAATTCCACCAAATaGTGTCCGATGAGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQQNSTK*CPMRGN
Trigger: ATTACCCCTCATCGGACATCATTTGGTGGAATTCTG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCTGTCAGAGTACTTCTaGTTTAAGAGCAATGCGTAC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLSEYF*FKSNAY
Trigger: GTACGCATTGCTCTTAAATCAGAAGTACTCTGACAG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCCAACCCACTTGCTGTaGTATTTGATGTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKPTHLL*YLMCCI
Trigger: GATGCAGCACATCAAATATCACAGCAAGTGGGTTGG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAACTAGTCCCTCTGACTaGAGAAAGTCCTGTATGATC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQTSPSD*RKSCMI
Trigger: GATCATACAGGACTTTCTTCAGTCAGAGGGACTAGT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATTCAGAATAGCAGACTaGCAGACAGTCAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQFRIAD*QTVKEQ
Trigger: CTGCTCTTTGACTGTCTGTCAGTCTGCTATTCTGAA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAGAGTGGCTAACTGTTaGCTGCTAAGTTGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVRVANC*LLSCLS
Trigger: GCTTAAACAACTTAGCAGTCAACAGTTAGCCACTCT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGAGAATGAGGCCACTTaGAATCAAAGCCTACTCCAT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQENEAT*NQSLLH
Trigger: ATGGAGTAGGCTTTGATTTCAAGTGGCCTCATTCTC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATGGAACTGTCGATCTaGACAGTCAAACCTTCCACT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQMELSI*TVKPST
Trigger: AGTGGAAGGTTTGACTGTGCAGATCGACAGTTCCAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCAGGAATCACAATCTaGCAATACTCGCATAAGAAC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPGITI*QYSHKN
Trigger: GTTCTTATGCGAGTATTGGCAGATTGTGATTCCTGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACAAGGAACCATGGATTaGAATCAAGTTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTQGTMD*NQVLST
Trigger: TGTGCTGAGAACTTGATTGCAATCCATGGTTCCTTG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACTAACTAAGGTGTCTTaGCAACCCACTTGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLTKVS*QPTCCD
Trigger: ATCACAGCAAGTGGGTTGGCAAGACACCTTAGTTAG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACAGGTTCTCTTGGCGTaGTTTTCGATTAAATGGCTC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKQVLLA*FSIKWL
Trigger: GAGCCATTTAATCGAAAAGCACGCCAAGAGAACCTG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGTAGCAGGAATAGAATaGAACTGTCGATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQVAGIE*NCRSAQ
Trigger: CTGTGCAGATCGACAGTTCCATTCTATTCCTGCTAC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAGTGTCTATTTTGGTTaGCTTCTGCACTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVSVYFG*LLHCFF
Trigger: GAAGAAGCAGTGCAGAAGCCAACCAAAATAGACACT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCACTCAGTACCTCGTTaGTGTGTCCATAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVHSVPR*CVHKES
Trigger: AGATTCTTTATGGACACACCAACGAGGTACTGAGTG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCTGAGATTCAAGCTGTaGAGATCTCTTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLRFKL*RSLIDR
Trigger: CCTGTCTATAAGAGATCTCCACAGCTTGAATCTCAG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAAGCAGAGATATTCCTaGAGGCATATCATCTACCCT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVKQRYS*RHIIYP
Trigger: AGGGTAGATGATATGCCTCCAGGAATATCTCTGCTT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGACACACTGTAGAAGCTaGATCCTCAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKTHCRS*ILRTCR
Trigger: TCTGCAGGTTCTGAGGATCCAGCTTCTACAGTGTGT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAAGATTTGCAGGTCATaGGATTGTAGTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVKICRS*DCSSGS
Trigger: GCTTCCAGAACTACAATCCCATGACCTGCAAATCTT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGAATCACAGAAACTGTaGTCAGGAAGCATAACCGTT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVESQKL*SGSITV
Trigger: AACGGTTATGCTTCCTGACCACAGTTTCTGTGATTC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACCCCATTCACTGTCTTaGGTTCCAGCTGATATCAAT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQPHSLS*VPADIN
Trigger: ATTGATATCAGCTGGAACCCAAGACAGTGAATGGGG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGAAGGCTGTGAGTGTTaGATACCCAGATTATCTCTC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQEGCEC*IPRLSL
Trigger: GAGAGATAATCTGGGTATCCAACACTCACAGCCTTC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGATTTGGGGAATGAAGTaGCAACAGTCGGCTATATAT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVIWGMK*QQSAIY
Trigger: ATATATAGCCGACTGTTGTCACTTCATTCCCCAAAT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAATAATAGAAAACGTTaGGTGCCTCTACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQNNRKR*VPLLQL
Trigger: CAGCTGCAGTAGAGGCACTCAACGTTTTCTATTATT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGGTTCCTTTAATAATTaGCAGGGTGTTTGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTGSFNN*QGVCPK
Trigger: TTTTGGGCAAACACCCTGTCAATTATTAAAGGAACC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATGCATTCTTATCCTTaGGGGTGGTCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQMHSYP*GWSFLQ
Trigger: CTGAAGAAAAGACCACCCTCAAGGATAAGAATGCAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCATTCAGTTTCTCCAGCTaGAATCTGGCTGAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSFSFSS*NLAEPL
Trigger: AAGCGGCTCAGCCAGATTTCAGCTGGAGAAACTGAA...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCTTCAATACATGTCTaGTCTGCCATTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSSIHV*SAISFS
Trigger: AGAGAAGGAAATGGCAGATCAGACATGTATTGAAGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTACTATGTGACAAATTaGAATACTGGAGGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVYYVTN*NTGGHS
Trigger: AGAGTGCCCTCCAGTATTTCAATTTGTCACATAGTA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGATGCCAAGAGTCAACTaGTCCTGGTCTAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKMPRVN*SWSKQN
Trigger: GTTTTGCTTAGACCAGGATCAGTTGACTCTTGGCAT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTATAATGCCTTCACCTaGGGAGGTTGTAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKYNAFT*GGCSGS
Trigger: TGAACCACTACAACCTCCTCAGGTGAAGGCATTATA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAACTTTGTATCTCTTCATaGGATCCACCTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKLCISS*DPPLHR
Trigger: TCTGTGCAAAGGTGGATCTCATGAAGAGATACAAAG...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAGTAGCCAACTTCTCTaGGTCGAATATGTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVSSQLL*VEYVVY
Trigger: GTAAACAACATATTCGACTCAGAGAAGTTGGCTACT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGATGGAACTGTCGATCTaGACAGTCAAACCTTCCACT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKMELSI*TVKPST
Trigger: AGTGGAAGGTTTGACTGTGCAGATCGACAGTTCCAT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGTCACAATATCCATATaGCGGATGATGTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVVTISI*RMMCEI
Trigger: TATCTCACACATCATCCGGCATATGGATATTGTGAC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATGGATCCTCAGAACCTaGAGAATATTATCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKWILRT*RILSGS
Trigger: GCTTCCTGATAATATTCTGCAGGTTCTGAGGATCCA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCAGAGATGAAGATTTaGAGGTCATGGGATTGTAGT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSEMKI*RSWDCS
Trigger: ACTACAATCCCATGACCTGCAAATCTTCATCTCTGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATCGGAACTTTGCAAATaGAAATTGTGCTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTSELCK*KLCCKC
Trigger: GCATTTGCAGCACAATTTGCATTTGCAAAGTTCCGA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACTACCCCAATTGGTTTaGAAAGATCTCGAAATACAG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTLPQLV*KDLEIQ
Trigger: CTGTATTTCGAGATCTTTCCAAACCAATTGGGGTAG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTAGCAGGAATAGAATaGAACTGTCGATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVAGIE*NCRSAQ
Trigger: CTGTGCAGATCGACAGTTCCATTCTATTCCTGCTAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAGTGTCTATTTTGGTTaGCTTCTGCACTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSVYFG*LLHCFF
Trigger: GAAGAAGCAGTGCAGAAGCCAACCAAAATAGACACT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTTGAAGTGTCTATTTTaGTTGGCTTCTGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLKCLF*LASALL
Trigger: AAGCAGTGCAGAAGCCAACCAAAATAGACACTTCAA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACTGATTTTTGGGGATaGTGGCCTTTAATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVTDFWG*WPLIVE
Trigger: TTCCACTATTAAAGGCCACCATCCCCAAAAATCAGT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAACTGCGCTGAGTTTTTaGATTTGTCACAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTTALSF*ICHSLI
Trigger: GATCAAACTGTGACAAATCCAAAAACTCAGCGCAGT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCTGAATGGTTGATATaGCCAAACAATCCAATTGTC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPEWLI*PNNPIV
Trigger: GACAATTGGATTGTTTGGCCATATCAACCATTCAGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATACTTCCTTAGCAGCTaGAGATTTGTTCATTACTGC +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTYFLSS*RFVHYC
Trigger: GCAGTAATGAACAAATCTCCAGCTGCTAAGGAAGTA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAGAAGCAAGAGAGGTTaGACATTACTAATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTRSKRG*TLLMPK
Trigger: TTTGGGCATTAGTAATGTCCAACCTCTCTTGCTTCT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCTCCCCAAGGAACCATaGATTGCAATCAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLPKEP*IAIKFS
Trigger: TGAGAACTTGATTGCAATCCATGGTTCCTTGGGGAG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGACAAATTGAAATACTaGAGGGCACTCTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTDKLKY*RALSRL
Trigger: AAGTCTAGAGAGTGCCCTCCAGTATTTCAATTTGTC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATGTGCTGCATCTGGCTaGAACTGCAAAATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKCAASG*NCKICK
Trigger: TTTGCAAATTTTGCAGTTCCAGCCAGATGCAGCACA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATTGATGTGCTGCATCTaGCTGGAACTGCAAAATTTG +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKLMCCI*LELQNL
Trigger: CAAATTTTGCAGTTCCAGCCAGATGCAGCACATCAA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATGCTTTTCGATTAAATaGCTCCACAAACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQCFSIK*LHKQLL
Trigger: CAGGAGCTGTTTGTGGAGCCATTTAATCGAAAAGCA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAAAGCAATGTATCACTaGAAGGCTGTGAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKKAMYH*KAVSVG
Trigger: TCCAACACTCACAGCCTTCCAGTGATACATTGCTTT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATTCATGAAGATGAGCTaGAACATATTCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTFMKMS*NIFRLQ
Trigger: TTGGAGTCTGAATATGTTTCAGCTCATCTTCATGAA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGGTTCCTTTAATAATTaGCAGGGTGTTTGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKGSFNN*QGVCPK
Trigger: TTTTGGGCAAACACCCTGTCAATTATTAAAGGAACC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGATGCATTCTTATCCTTaGGGGTGGTCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKMHSYP*GWSFLQ
Trigger: CTGAAGAAAAGACCACCCTCAAGGATAAGAATGCAT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGAGATGTGGTTAAAGTaGCAAAGCAATAAATCAGGT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVEMWLK*QSNKSG
Trigger: ACCTGATTTATTGCTTTGTCACTTTAACCACATCTC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAACTAAGGATTCGTCCTaGAATTCTATGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTTKDSS*NSMSPI
Trigger: AATTGGAGACATAGAATTTCAGGACGAATCCTTAGT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGGACGAATTCCACTGTaGGAGAAGCTGGTTTATATT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKGRIPL*EKLVYI
Trigger: AATATAAACCAGCTTCTCTCACAGTGGAATTCGTCC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTCTGTAGCAGTCGTATaGGATGTTCAAAGCAATTGC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKSVAVV*DVQSNC
Trigger: GCAATTGCTTTGAACATCTCATACGACTGCTACAGA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAGCCTGAATGGTTaGTATGGCCAAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKQSLNG*YGQTIQ
Trigger: TTGGATTGTTTGGCCATATCAACCATTCAGGCTTTG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTTCAACAGGTGTTACTaGTTCAGGAACTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKFNRCY*FRNCAF
Trigger: GAAAGCACAGTTCCTGAATCAGTAACACCTGTTGAA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACTTGATTCTCTGATTTaGAAGACAATTCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLDSLI*KTILPQ
Trigger: CTGTGGGAGAATTGTCTTTCAAATCAGAGAATCAAG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAATGAGTCAATTCCACTaGGGTCTAAACTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKMSQFH*GLNSNV
Trigger: CACATTTGAGTTTAGACCTCAGTGGAATTGACTCAT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATATGTGTCAGTAATTaGAGAAGCTCCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQICVSN*RSSSSH
Trigger: ATGTGAGGAGGAGCTTCTTCAATTACTGACACATAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAATTACCCCTTCCAATaGATCCTAGAAGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKNYPFQ*ILEATG
Trigger: TCCAGTTGCTTCTAGGATTCATTGGAAGGGGTAATT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATGTTCCTTGATTGATTaGCTTAGAACATGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKCSLID*LRTCSS
Trigger: GCTGGAACATGTTCTAAGTCAATCAATCAAGGAACA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATTAGCTAGCTTCCAGTaGATTGGATTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKLASFQ*IGFCFL
Trigger: AAGGAAACAGAATCCAATTCACTGGAAGCTAGCTAA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCTTCCTCATGGGTTTTaGAATTATAATTCGGTACCA +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLPHGF*NYNSVP
Trigger: TGGTACCGAATTATAATTTCAAAACCCATGAGGAAG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAACTTTCACCGAGTTTTaGAAATCCAAGTGTGCAACA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKTFTEF*KSKCAT
Trigger: TGTTGCACACTTGGATTTTCAAAACTCGGTGAAAGT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGTCACAATATCCATATaGCGGATGATGTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKVTISI*RMMCEI
Trigger: TATCTCACACATCATCCGGCATATGGATATTGTGAC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTGGTCTTTTCTTCAGTaGTGGAGTAGACAACAATAT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVWSFLQ*WSRQQY
Trigger: ATATTGTTGTCTACTCCAGCACTGAAGAAAAGACCA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAAAATTGACAAGGCTTaGTGTTGTTCCTCTAACCCA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKKIDKA*CCSSNP
Trigger: TGGGTTAGAGGAACAACAGCAAGCCTTGTCAATTTT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAGATTTGTTCATTACTaGGGTCAAAGCCTGAATGGT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKRFVHY*GQSLNG
Trigger: ACCATTCAGGCTTTGACCGCAGTAATGAACAAATCT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATCTAATCCCCATGTTTaGATTGACACAAGTAGTTCG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSNPHV*IDTSSS
Trigger: CGAACTACTTGTGTCAATGCAAACATGGGGATTAGA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCATATTCTCTTTTTGTaGACACTGCCACGACCAACA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKHILFL*TLPRPT
Trigger: TGTTGGTCGTGGCAGTGTGCACAAAAAGAGAATATG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAGGAAGCATAACCGTTaGATATTCTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVRKHNR*IFSFCA
Trigger: TGCACAAAAAGAGAATATGCAACGGTTATGCTTCCT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGATTTTTGCAGGCCTTTaGTGTGTAGTAAAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVIFAGL*CVVKKD
Trigger: ATCCTTCTTTACTACACAGCAAAGGCCTGCAAAAAT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGACAGATTGAATTTTTaGAGGCCTTTGCTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKDRLNF*RPLLCS
Trigger: ACTACACAGCAAAGGCCTGCAAAAATTCAATCTGTC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTATCTAGGAGAAACTaGACACCATACTTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVSRRN*TPYFFR
Trigger: CCGAAAGAAGTATGGTGTGCAGTTTCTCCTAGATAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGCTCATAAACGTTCGTaGATTTCAACATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTAHKRS*ISTFVP
Trigger: TGGAACAAATGTTGAAATGCACGAACGTTTATGAGC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATGGAACTGCAAAATTTaGAAAACCTTTCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTWNCKI*KTFLQM
Trigger: CATCTGCAGAAAGGTTTTGCAAATTTTGCAGTTCCA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAAACACAGGATACTGTaGAAGGTCATTATAGGTTCG +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKKHRIL*KVIIGS
Trigger: CGAACCTATAATGACCTTGCACAGTATCCTGTGTTT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATTGAAGTGTCTATTTTaGTTGGCTTCTGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLKCLF*LASALL
Trigger: AAGCAGTGCAGAAGCCAACCAAAATAGACACTTCAA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGATTTTTGGGGATGGTaGCCTTTAATAGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQDFWGW*PLIVEY
Trigger: GTATTCCACTATTAAAGGCCACCATCCCCAAAAATC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGATTTTTGGGGATGGTaGCCTTTAATAGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKDFWGW*PLIVEY
Trigger: GTATTCCACTATTAAAGGCCACCATCCCCAAAAATC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAACTGATTTTTGGGGATaGTGGCCTTTAATAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQTDFWG*WPLIVE
Trigger: TTCCACTATTAAAGGCCACCATCCCCAAAAATCAGT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCACTCAGTACCTCGTTaGTGTGTCCATAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKHSVPR*CVHKES
Trigger: AGATTCTTTATGGACACACCAACGAGGTACTGAGTG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTCTTTTCTTCAGTGCTaGAGTAGACAACAATATGTC +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVSFLQC*SRQQYV
Trigger: GACATATTGTTGTCTACTCCAGCACTGAAGAAAAGA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCTGAGATTCAAGCTGTaGAGATCTCTTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLRFKL*RSLIDR
Trigger: CCTGTCTATAAGAGATCTCCACAGCTTGAATCTCAG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTGTGACACAAACACAATaGATAGGCAGTCGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSVTQTQ*IGSRMA
Trigger: AGCCATGCGACTGCCTATCCATTGTGTTTGTGTCAC...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCGGTCAAAGCCTGAATaGTTGATATGGCCAAACAAT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKRSKPE*LIWPNN
Trigger: ATTGTTTGGCCATATCAACCATTCAGGCTTTGACCG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCTTTTTCCAGGCATGTaGACAACAGTTATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLFPGM*TTVMLC
Trigger: GCACAACATAACTGTTGTCCACATGCCTGGAAAAAG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGTCGAAGTAGTTCACTaGATATTCCTGGTTTACTTA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTVEVVH*IFLVYL
Trigger: TAAGTAAACCAGGAATATCCAGTGAACTACTTCGAC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGAGTTTTACCCATACTaGACTTTCAGAATAGCAGAC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQEFYPY*TFRIAD
Trigger: GTCTGCTATTCTGAAAGTCCAGTATGGGTAAAACTC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGAAGCTCATAAATTTTaGAAACCAGGGTACGAACAA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTEAHKF*KPGYEQ
Trigger: TTGTTCGTACCCTGGTTTCCAAAATTTATGAGCTTC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATACCTCAGGTTCTCTTaGCGTGCTTTTCGATTAAAT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKYLRFS*RAFRLN
Trigger: ATTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATTCATGAAGATGAGCTaGAACATATTCAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQFMKMS*NIFRLQ
Trigger: TTGGAGTCTGAATATGTTTCAGCTCATCTTCATGAA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR TCA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCACTTGTATGCTGCCTGTaGCAATGTGTTCTCCGATTA +
Preference number: 4 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSLVCCL*QCVLRL
Trigger: TAATCGGAGAACACATTGTCACAGGCAGCATACAAG...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTAATTTTCGAGAAAGCTaGCCTGAACGCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSNFRES*PERISA
Trigger: TGCTGAGATGCGTTCAGGTCAGCTTTCTCGAAAATT...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp TACAAAAGCAAGGCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCGAGAATCTTACCAGATaGATTAACGCAGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: YKSKAVLMKHVTNMALIVENLTR*INAGSF
Trigger: GAAACTTCCTGCGTTAATTCATCTGGTAAGATTCTC...GACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGCCTTGCTTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGCTCTACTGTGCTTATaGAGAGTATTTCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKALLCL*RVFPFS
Trigger: TGAAAACGGAAATACTCTTCATAAGCACAGTAGAGC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATCAATCACTTTGGTCTaGAGAAGGGTATTTAGCTTA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKSITLV*RRVFSL
Trigger: TAAGCTAAATACCCTTCTTCAGACCAAAGTGATTGA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAAGGGGAATCAGAAATaGGTAGATTTCAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKKGNQK*VDFSLF
Trigger: GAACAGACTGAAATCTACTCATTTCTGATTCCCCTT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAAGAACCATTTATACTaGGCTGAGTTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SGIKALQHCRELRDVVKVKNHLY*AEFLDL
Trigger: CAAATCCAAAAACTCAGCGCAGTATAAATGGTTCTT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTGACATCACTTGAATaGTATTATCCCAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVTSLE*YYPSIQ
Trigger: CTGGATACTGGGATAATAGCATTCAAGTGATGTCAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCCTGTTGTGTTATTTaGCATATCATACATGTAGTA +
Preference number: 4 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPCCVI*HIIHVV
Trigger: TACTACATGTATGATATGGCAAATAACACAACAGGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATTCACAAAATGCCAATaGGTGGATCACAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQFTKCQ*VDHKFF
Trigger: GAAGAATTTGTGATCCACGCATTGGCATTTTGTGAA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGACAACAGTTATGTTGTaGCAGAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKTTVML*QRESQK
Trigger: TTTCTGTGATTCCCTCTGGCACAACATAACTGTTGT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACTGATTCAGGAACTGTaGTTTCATTCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLIQEL*FHSFLQ
Trigger: CTGAAGAAAAGAATGAAAGCACAGTTCCTGAATCAG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACTTTCTCTGTCAGAGTaGACAGAAAACGATTTAGTA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLSLSE*TENDLV
Trigger: TACTAAATCGTTTTCTGTGCACTCTGACAGAGAAAG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATCCCGGTCTCGTTTATaGATATTTACCATTAAAGCT +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSRSRL*IFTIKA
Trigger: AGCTTTAATGGTAAATATGCATAAACGAGACCGGGA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAAGATAGAGCTGTATTaGTTTCCAGCGTCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKKIELY*FPASKS
Trigger: ACTCTTAGACGCTGGAAAGCAATACAGCTCTATCTT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAAATTGTGCTGCAAATaGTACTTAAAAGGCCCAACT +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKKLCCK*YLKGPT
Trigger: AGTTGGGCCTTTTAAGTAGCATTTGCAGCACAATTT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAGAAATTCGGAACTTTaGAAATGCAAATTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKRNSEL*KCKLCC
Trigger: GCAGCACAATTTGCATTTGCAAAGTTCCGAATTTCT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAACATACAAAGTCTCTaGACAATTTCAGAGGGATTC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKNIQSL*TISEGF
Trigger: GAATCCCTCTGAAATTGTGCAGAGACTTTGTATGTT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCTACCCCAATTGGTTTaGAAAGATCTCGAAATACAG +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLPQLV*KDLEIQ
Trigger: CTGTATTTCGAGATCTTTCCAAACCAATTGGGGTAG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATCTTTTCTTCAGTGCTaGAGTAGACAACAATATGTC +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSFLQC*SRQQYV
Trigger: GACATATTGTTGTCTACTCCAGCACTGAAGAAAAGA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATTCTGGCTTTCACTCTaGCACTTTAAGTTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKFWLSL*HFKFSL
Trigger: TAAGGAAAACTTAAAGTGCCAGAGTGAAAGCCAGAA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTATGCATTCTTATCCTTaGGGGTGGTCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSMHSYP*GWSFLQ
Trigger: CTGAAGAAAAGACCACCCTCAAGGATAAGAATGCAT...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTGCTTTGATTGTCCAGTaGCTGAGAATCTTACCAGAT +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSALIVQ*LRILPD
Trigger: ATCTGGTAAGATTCTCAGTCACTGGACAATCAAAGC...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTCTTTAATGATGGTTaGAAGATACTGTATGTGACC +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVFNDG*KILYVT
Trigger: GGTCACATACAGTATCTTTCAACCATCATTAAAGAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGTAGGTGCAAGTTCATaGAGAGAAGCTCATAAATTT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKVGASS*REAHKF
Trigger: AAATTTATGAGCTTCTCTTCATGAACTTGCACCTAC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR TCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGAGGTAGTCAAAATTTaGTATCTCTCTGTTTACCCA +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKEVVKI*YLSVYP
Trigger: TGGGTAAACAGAGAGATATCAAATTTTGACTACCTC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAAGAACCATTTATACTaGGCTGAGTTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQKNHLY*AEFLDL
Trigger: CAAATCCAAAAACTCAGCGCAGTATAAATGGTTCTT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACCCTGTTGTGTTATTTaGCATATCATACATGTAGTA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQPCCVI*HIIHVV
Trigger: TACTACATGTATGATATGGCAAATAACACAACAGGG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTGGTCTTTTCTTCAGTaGTGGAGTAGACAACAATAT +
Preference number: 4 (lower is better)
Translates to: IKALQHCRELRDVVKVTKWSFLQ*WSRQQY
Trigger: ATATTGTTGTCTACTCCAGCACTGAAGAAAAGACCA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACCACTACAATCAATTTaGCATCTTCTAAACCTACAA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQPLQSI*HLLNLQ
Trigger: TTGTAGGTTTAGAAGATGGCAAATTGATTGTAGTGG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR GCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAGAAGTATTAACAAGTaGTTCATTAAGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKRSINK*FIKKES
Trigger: GGACTCCTTCTTAATGAAGCACTTGTTAATACTTCT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATTAACTACCCCAATTaGTTTGGAAAGATCTCGAAA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQINYPN*FGKISK
Trigger: TTTCGAGATCTTTCCAAACCAATTGGGGTAGTTAAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CCA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCACACTCAGTACCTCGTTaGTGTGTCCATAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSHSVPR*CVHKES
Trigger: AGATTCTTTATGGACACACCAACGAGGTACTGAGTG...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTCTGAGATTCAAGCTGTaGAGATCTCTTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSLRFKL*RSLIDR
Trigger: CCTGTCTATAAGAGATCTCCACAGCTTGAATCTCAG...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACAAAATGCCAATGCGTaGATCACAAATTCTTCAATA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQQNANA*ITNSSI
Trigger: TATTGAAGAATTTGTGATCCACGCATTGGCATTTTG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAACCAACATACCTGAATaGGTAATAAAGGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KALQHCRELRDVVKVTKQTNIPE*VIKASK
Trigger: TTTTGAAGCCTTTATTACCCATTCAGGTATGTTGGT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CCA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATGTCCTTCACTAAAGTaGCTGATTTGTTCCAATAAA +
Preference number: 4 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKCPSLK*LICSNK
Trigger: TTTATTGGAACAAATCAGCCACTTTAGTGAAGGACA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR GCA 90 bp TACAAAAGCAAGGCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCCCACTACAATCAATTTaGCATCTTCTAAACCTACAA +
Preference number: 4 (lower is better)
Translates to: YKSKAVLMKHVTNMALIVPLQSI*HLLNLQ
Trigger: TTGTAGGTTTAGAAGATGGCAAATTGATTGTAGTGG...GACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGCCTTGCTTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR GCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTGGTCTTTTCTTCAGTaGTGGAGTAGACAACAATAT +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSWSFLQ*WSRQQY
Trigger: ATATTGTTGTCTACTCCAGCACTGAAGAAAAGACCA...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CCA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCTTTTCTTCAGTGCTaGAGTAGACAACAATATGTC +
Preference number: 4 (lower is better)
Translates to: RILPDELTQEVSNSNEVSSFLQC*SRQQYV
Trigger: GACATATTGTTGTCTACTCCAGCACTGAAGAAAAGA...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS TCA 90 bp CCTCCCCAGGAGGCTGATGACAGAATTCCACCAAATGATGTCCGATaGGGGGTAATGGGAGAAGAGAAAGGTGGATCTGGGATTTGGGAT +
Preference number: 5 (lower is better)
Translates to: PPQEADDRIPPNDVR*GVMGEEKGGSGIWD
Trigger: ATCCCAAATCCCAGATCCACCTTTCTCTTCTCCCATTACCCCTCATCGGACATCATTTGGTGGAATTCTGTCATCAGCCTCCTGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 90 bp TGTTATCCCTCTCCTAGCACCCTACCCACCAATAGGCCCAGTGTGTaGTGTTCCCCTCCTCATCTCCATGTGTTCTCATTGTTCAACTCC +
Preference number: 5 (lower is better)
Translates to: CYPSPSTLPTNRPSV*CSPPHLHVFSLFNS
Trigger: GGAGTTGAACAATGAGAACACATGGAGATGAGGAGGGGAACATCACACACTGGGCCTATTGGTGGGTAGGGTGCTAGGAGAGGGATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460416.2
CDS CCA 90 bp CAAGTGTCCATCTCTGCCCTATATTTCATGCCCATTCCAGGTGACTaGTCTAGGGGTTGGTATATGACCCAGTTCTGGAGAGTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: QVSISALYFMPIPGD*SRGWYMTQFWRVRR
Trigger: TCTCCTCACTCTCCAGAACTGGGTCATATACCAACCCCTAGACCAGTCACCTGGAATGGGCATGAAATATAGGGCAGAGATGGACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS TCA 90 bp GACTTAGTTTTCGGGCCATTGTCAGGATTGCTCGAGTCACGGGAGTaGCATAAGGGTGAACAGACTCAGATTCATCCACTCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: DLVFGPLSGLLESRE*HKGEQTQIHPLSAI
Trigger: GATTGCTGAGAGTGGATGAATCTGAGTCTGTTCACCCTTATGTCACTCCCGTGACTCGAGCAATCCTGACAATGGCCCGAAAACTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 90 bp GTAGACTCTACTGGGGATGGTGTGCTAGGCAGACTGTCTGGCACTTaGCTTCCACTATCACTCATTTCACATGAGTCAATTCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: VDSTGDGVLGRLSGT*LPLSLISHESIPLR
Trigger: CCTCAGTGGAATTGACTCATGTGAAATGAGTGATAGTGGAAGTCAAGTGCCAGACAGTCTGCCTAGCACACCATCCCCAGTAGAGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp GCTTTCTCTGTCAGAGTGCACAGAAAACGATTTAGTAGACTCTACTaGGGATGGTGTGCTAGGCAGACTGTCTGGCACTTGACTTCCACT +
Preference number: 5 (lower is better)
Translates to: AFSVRVHRKRFSRLY*GWCARQTVWHLTST
Trigger: AGTGGAAGTCAAGTGCCAGACAGTCTGCCTAGCACACCATCCCCAGTAGAGTCTACTAAATCGTTTTCTGTGCACTCTGACAGAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 90 bp CTCAGCAATCTCAGTAGTCGACGGATTTCTTCTGAGCTCACTGACTaGCTCCCCAAGGAACCATGGATTGCAATCAAGTTCTCAGCACAA +
Preference number: 5 (lower is better)
Translates to: LSNLSSRRISSELTD*LPKEPWIAIKFSAQ
Trigger: TTGTGCTGAGAACTTGATTGCAATCCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAGAAGAAATCCGTCGACTACTGAGATTGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 90 bp TACAGTATGTCAGCATTTCCTGGTTCAAAAAGCAGTAAGAAAAGCTaGCCTCTGGTTGGGCTGGTACGTAGGAGACTGAAGAGCACGTCC +
Preference number: 5 (lower is better)
Translates to: YSMSAFPGSKSSKKS*PLVGLVRRRLKSTS
Trigger: GGACGTGCTCTTCAGTCTCCTACGTACCAGCCCAACCAGAGGTCAGCTTTTCTTACTGCTTTTTGAACCAGGAAATGCTGACATACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 90 bp CCTACCCACTTCTTCAGGATCTCCATCCTCCCAGGAATCACAATCTaGCAATACTCGCATAAGAACTTCCATAGTGGCTGGAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: PTHFFRISILPGITI*QYSHKNFHSGWRNC
Trigger: GCAATTTCTCCAGCCACTATGGAAGTTCTTATGCGAGTATTGGCAGATTGTGATTCCTGGGAGGATGGAGATCCTGAAGAAGTGGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp TCTGTCAGAGTGCACAGAAAACGATTTAGTAGACTCTACTGGGGATaGTGTGCTAGGCAGACTGTCTGGCACTTGACTTCCACTATCACT +
Preference number: 5 (lower is better)
Translates to: SVRVHRKRFSRLYWG*CARQTVWHLTSTIT
Trigger: AGTGATAGTGGAAGTCAAGTGCCAGACAGTCTGCCTAGCACACCATCCCCAGTAGAGTCTACTAAATCGTTTTCTGTGCACTCTGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGCGCATCTCAGCAGGCTaGCCAACACCCACTACAATC +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVRISAG*PTPTTI
Trigger: GATTGTAGTGGGTGTTGGCAAGCCTGCTGAGATGCG...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAGGTGGATCTGGGATTaGGGATGGTGGAGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTRWIWD*GWWRSG
Trigger: ACCACTCCTCCACCATCCCAAATCCCAGATCCACCT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp AGCAGCTGGAGATTTGTTCATTACTGCGGTCAAAGCCTGAATGGTTaGTATGGCCAAACAATCCAATTGTCCCTGAAACACCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SSWRFVHYCGQSLNG*YGQTIQLSLKHLVL
Trigger: GAGGACCAGGTGTTTCAGGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCTCCAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683969.1
CDS CCA 90 bp GGAATCACAATCTGCCAATACTCGCATAAGAACTTCCATAGTGGCTaGAGAAATTGCTTGCAAAGCATTCCTCTGCCCACCGGCTACAAT +
Preference number: 5 (lower is better)
Translates to: GITICQYSHKNFHSG*RNCLQSIPLPTGYN
Trigger: ATTGTAGCCGGTGGGCAGAGGAATGCTTTGCAAGCAATTTCTCCAGCCACTATGGAAGTTCTTATGCGAGTATTGGCAGATTGTGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp TGGGATTGTAGTTCTGGAAGCCACTGGATAAGAAGCAAGAGAGGTTaGACATTACTAATGCCCAAAATCCCAACTGAAGTGTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: WDCSSGSHWIRSKRG*TLLMPKIPTEVWSP
Trigger: GGGTGACCACACTTCAGTTGGGATTTTGGGCATTAGTAATGTCCAACCTCTCTTGCTTCTTATCCAGTGGCTTCCAGAACTACAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp CCCATTCCAGGTGACTGGTCTAGGGGTTGGTATATGACCCAGTTCTaGAGAGTGAGGAGAACTTATGAGAAAGAGTTTCTCACTCTTAAG +
Preference number: 5 (lower is better)
Translates to: PIPGDWSRGWYMTQF*RVRRTYEKEFLTLK
Trigger: CTTAAGAGTGAGAAACTCTTTCTCATAAGTTCTCCTCACTCTCCAGAACTGGGTCATATACCAACCCCTAGACCAGTCACCTGGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCTTCCACTCTGAAGTaGGATGTGGAGGGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPSTLK*DVEGGE
Trigger: TTCACCACCCTCCACATCCAACTTCAGAGTGGAAGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTTGACTCTGAGGCCTTaGTGGAAGTCCATACGAGCC +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLTLRP*WKSIRA
Trigger: GGCTCGTATGGACTTCCACAAAGGCCTCAGAGTCAA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAAAGCTGACCTCTGGTaGGGCTGGTACGTAGGAGAC +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQKADLW*GWYVGD
Trigger: GTCTCCTACGTACCAGCCCAACCAGAGGTCAGCTTT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS GCA 90 bp CAGACAACAGATTTACCTCATTTTCTGAAAGTCACCAATTCTGACTaGCTTACTGTGATGCCCTGCCTCCAACAGCTTGTTCCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: QTTDLPHFLKVTNSD*LTVMPCLQQLVPEF
Trigger: GAACTCTGGAACAAGCTGTTGGAGGCAGGGCATCACAGTAAGGCAGTCAGAATTGGTGACTTTCAGAAAATGAGGTAAATCTGTTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATCACCGTTCCATCCCTaGATCCTGACACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQSPFHP*ILTLPC
Trigger: ACATGGCAGTGTCAGGATCAAGGGATGGAACGGTGA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCGCATCTCAGCAGGCTaGCCAACACCCACTACAATC +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKRISAG*PTPTTI
Trigger: GATTGTAGTGGGTGTTGGCAAGCCTGCTGAGATGCG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TACAAAAGCAAGGCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCCGCATCTCAGCAGGCTaGCCAACACCCACTACAATC +
Preference number: 5 (lower is better)
Translates to: YKSKAVLMKHVTNMALIVRISAG*PTPTTI
Trigger: GATTGTAGTGGGTGTTGGCAAGCCTGCTGAGATGCG...GACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGCCTTGCTTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS TCA 90 bp AGCAGCTGGAGATTTGTTCATTACTGCGGTCAAAGCCTGAATGGTTaGTATGGCCAAACAATCCAATTGTCCCTGAAACACCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: SSWRFVHYCGQSLNG*YGQTIQLSLKHLAV
Trigger: AACTGCAAGGTGTTTCAGGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCTCCAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
CDS TCA 90 bp TCTGTATGGGAGGCACAGAAATTCCTGCCATACTATGTGACAAATTaGAATACTGGAGGGCACTCTCTAGACTTAGTTTTCGGGCCATTG +
Preference number: 5 (lower is better)
Translates to: SVWEAQKFLPYYVTN*NTGGHSLDLVFGPL
Trigger: CAATGGCCCGAAAACTAAGTCTAGAGAGTGCCCTCCAGTATTTCAATTTGTCACATAGTATGGCAGGAATTTCTGTGCCTCCCATACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 90 bp AGCAGCTGGAGATTTGTTCATTACTGCGGTCAAAGCCTGAATGGTTaGTATGGCCAAACAATCCAATTGTCCCTGAAACACCTATTGAGG +
Preference number: 5 (lower is better)
Translates to: SSWRFVHYCGQSLNG*YGQTIQLSLKHLLR
Trigger: CCTCAATAGGTGTTTCAGGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCTCCAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682630.1
CDS TCA 90 bp CGTTGCATATTCTCTTTTTGTGCACACTGCCACGACCAACATACCTaGATGGGTAATAAAGGCTTCAAAACCCATGCCACTTCCTGTACA +
Preference number: 5 (lower is better)
Translates to: RCIFSFCAHCHDQHT*MGNKGFKTHATSCT
Trigger: TGTACAGGAAGTGGCATGGGTTTTGAAGCCTTTATTACCCATTCAGGTATGTTGGTCGTGGCAGTGTGCACAAAAAGAGAATATGCAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684091.1
CDS GCA 90 bp TGCAAAGCATTCCTCTGCCCACCGGCTACAATGGCTCCAAAGAGATaGAATAAGCAACATTTAAGACTTTCCTTGAGATGTTCACTTTCC +
Preference number: 5 (lower is better)
Translates to: CKAFLCPPATMAPKR*NKQHLRLSLRCSLS
Trigger: GGAAAGTGAACATCTCAAGGAAAGTCTTAAATGTTGCTTATTGCATCTCTTTGGAGCCATTGTAGCCGGTGGGCAGAGGAATGCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp GTTCAGGAAGGTGTTGAAACAGGTTTAGGGTTGAAGTGTCTATTTTaGTTGGCTTCTGCACTGCTTCTTCTGCTGATAATCTTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VQEGVETGLGLKCLF*LASALLLLLIILEG
Trigger: ACCCTCCAAGATTATCAGCAGAAGAAGCAGTGCAGAAGCCAACCAAAATAGACACTTCAACCCTAAACCTGTTTCAACACCTTCCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684709.1
CDS CCA 90 bp GGAGGCACAGAAATTCCTGCCATACTATGTGACAAATTGAAATACTaGAGGGCACTCTCTAGACTTAGTTTTCGGGCCATTGTCAGGATT +
Preference number: 5 (lower is better)
Translates to: GGTEIPAILCDKLKY*RALSRLSFRAIVRI
Trigger: AATCCTGACAATGGCCCGAAAACTAAGTCTAGAGAGTGCCCTCCAGTATTTCAATTTGTCACATAGTATGGCAGGAATTTCTGTGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS-3UTR CAA 90 bp TACAAAAGCAAGGCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCTCACCGTTCCATCCCTaGATCCTGACACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: YKSKAVLMKHVTNMALIVSPFHP*ILTLPC
Trigger: ACATGGCAGTGTCAGGATCAAGGGATGGAACGGTGA...GACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGCCTTGCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTCACCGTTCCATCCCTaGATCCTGACACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKSPFHP*ILTLPC
Trigger: ACATGGCAGTGTCAGGATCAAGGGATGGAACGGTGA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACGCATGGCTAATGGGTaGATGCTGAGATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQRMANG*MLRFKL
Trigger: CAGCTTGAATCTCAGCATCAACCCATTAGCCATGCG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATCTGGCTGAGCCGCTaGCTCGATCCCCAAAATTTT +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQIWLSR*LDPQNF
Trigger: AAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAATCTGGCTGAGCCGCTaGCTCGATCCCCAAAATTTT +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKIWLSR*LDPQNF
Trigger: AAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGAT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTTAGTTTTCGGGCCATaGTCAGGATTGCTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVLVFGP*SGLLES
Trigger: TGACTCGAGCAATCCTGACAATGGCCCGAAAACTAA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGGTTTCTCTCTAGTCTaGACTCTGAGGCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQGFSLV*TLRPLW
Trigger: CCACAAAGGCCTCAGAGTCAAGACTAGAGAGAAACC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACAGACTGTCTGGCACTaGACTTCCACTATCACTCAT +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTQTVWH*TSTITH
Trigger: ATGAGTGATAGTGGAAGTCAAGTGCCAGACAGTCTG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp ATTGACAAGGCTTGCTGTTGTTCCTCTAACCCATCTGCCATTTTCTaGACACACTGTAGAAGCTGGATCCTCAGAACCTGCAGAATATTA +
Preference number: 5 (lower is better)
Translates to: IDKACCCSSNPSAIF*THCRSWILRTCRIL
Trigger: TAATATTCTGCAGGTTCTGAGGATCCAGCTTCTACAGTGTGTTCAGAAAATGGCAGATGGGTTAGAGGAACAACAGCAAGCCTTGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449802.5
ENST00000460416.2
ENST00000463830.2
ENST00000478884.5
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000682787.1
ENST00000683001.1
ENST00000683091.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 90 bp CGTTGCATATTCTCTTTTTGTGCACACTGCCACGACCAACATACCTaGATGGGTAATAAAGGCTTCAAAACCCATGCCACTTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: RCIFSFCAHCHDQHT*MGNKGFKTHATSCK
Trigger: TTTACAGGAAGTGGCATGGGTTTTGAAGCCTTTATTACCCATTCAGGTATGTTGGTCGTGGCAGTGTGCACAAAAAGAGAATATGCAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 90 bp AAAAGCTTCTCGGTCCACATGTTTGAATTAACTAGTCCCTCTGACTaGAGAAAGTCCTGTATGATCAGCACTAGTCGGAAGGCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: KSFSVHMFELTSPSD*RKSCMISTSRKAFS
Trigger: TGAAAACGCCTTCCGACTAGTGCTGATCATACAGGACTTTCTTCAGTCAGAGGGACTAGTTAATTCAAACATGTGGACCGAGAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 90 bp TCACTAAAGCCCATATCATTTGTGATGCTGCTTTCTCTGTCAGAGTaGACAGAAAACGATTTAGTAGACTCTACTGGGGATGGTGTGCTA +
Preference number: 5 (lower is better)
Translates to: SLKPISFVMLLSLSE*TENDLVDSTGDGVL
Trigger: TAGCACACCATCCCCAGTAGAGTCTACTAAATCGTTTTCTGTGCACTCTGACAGAGAAAGCAGCATCACAAATGATATGGGCTTTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp GAGATGAAGATTTGCAGGTCATGGGATTGTAGTTCTGGAAGCCACTaGATAAGAAGCAAGAGAGGTTGGACATTACTAATGCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: EMKICRSWDCSSGSH*IRSKRGWTLLMPKI
Trigger: GATTTTGGGCATTAGTAATGTCCAACCTCTCTTGCTTCTTATCCAGTGGCTTCCAGAACTACAATCCCATGACCTGCAAATCTTCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp ATGTGGACAACAGTTATGTTGTGCCAGAGGGAATCACAGAAACTGTaGTCAGGAAGCATAACCGTTGCATATTCTCTTTTTGTGCACACT +
Preference number: 5 (lower is better)
Translates to: MWTTVMLCQRESQKL*SGSITVAYSLFVHT
Trigger: AGTGTGCACAAAAAGAGAATATGCAACGGTTATGCTTCCTGACCACAGTTTCTGTGATTCCCTCTGGCACAACATAACTGTTGTCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CCA 90 bp GCATATTCTCTTTTTGTGCACACTGCCACGACCAACATACCTGAATaGGTAATAAAGGCTTCAAAACCCATGCCACTTCCTGTACAATTG +
Preference number: 5 (lower is better)
Translates to: AYSLFVHTATTNIPE*VIKASKPMPLPVQL
Trigger: CAATTGTACAGGAAGTGGCATGGGTTTTGAAGCCTTTATTACCCATTCAGGTATGTTGGTCGTGGCAGTGTGCACAAAAAGAGAATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684091.1
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAGTTGAAGTGTCTATTTaGGTTGGCTTCTGCACTGCT +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTVEVSI*VGFCTA
Trigger: AGCAGTGCAGAAGCCAACCAAAATAGACACTTCAAC...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGGTTGAAGTGTCTATTTaGGTTGGCTTCTGCACTGCT +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVVEVSI*VGFCTA
Trigger: AGCAGTGCAGAAGCCAACCAAAATAGACACTTCAAC...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCGCATGGCTAATGGGTaGATGCTGAGATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKRMANG*MLRFKL
Trigger: CAGCTTGAATCTCAGCATCAACCCATTAGCCATGCG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAGTACTGGTTTCCACTaGACGCTGATCAGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKSTGFH*TLIRVA
Trigger: AGCAACTCTGATCAGCGTCAAGTGGAAACCAGTACT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGGCCAAACAATCCAATaGTCCCTGAAACACCTTGCA +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKGQTIQ*SLKHLA
Trigger: TGCAAGGTGTTTCAGGGACAATTGGATTGTTTGGCC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTTCCTTTTCCCTCCTTaGTTAGCAATGCCAAGAGTC +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVFLFPP*LAMPRV
Trigger: GACTCTTGGCATTGCTAACAAAGGAGGGAAAAGGAA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGTAAAGCACCAAGAGTaGCAACTCCATGGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQVKHQE*QLHGSE
Trigger: TTCACTCCCATGGAGTTGCAACTCTTGGTGCTTTAC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp GAACGGTTCTACACGAATGAGATAGTGCATGACCCCCGCAGAATTTaGATAGTGAGTACCATAGTGAAACTTATCAATAGTTCCCATAGG +
Preference number: 5 (lower is better)
Translates to: ERFYTNEIVHDPRRI*IVSTIVKLINSSHR
Trigger: CCTATGGGAACTATTGATAAGTTTCACTATGGTACTCACTATTCAAATTCTGCGGGGGTCATGCACTATCTCATTCGTGTAGAACCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 90 bp ACAATATTCACCTCACAGTATTGTAGTGAGAAGGAAATGAGACAATaGTCAAAGAGTGCTAACTTAGTGGCAGTCACACAGCACGCAGTT +
Preference number: 5 (lower is better)
Translates to: TIFTSQYCSEKEMRQ*SKSANLVAVTQHAV
Trigger: AACTGCGTGCTGTGTGACTGCCACTAAGTTAGCACTCTTTGAGCATTGTCTCATTTCCTTCTCACTACAATACTGTGAGGTGAATATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682077.1
CDS CCA 90 bp AAACCTACAAGAATATGGCTGTATTCTTTGGTGACACAAACACAATaGATAGGCAGTCGCATGGCTAATGGGTTGATGCTGAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: KPTRIWLYSLVTQTQ*IGSRMANGLMLRFK
Trigger: CTTGAATCTCAGCATCAACCCATTAGCCATGCGACTGCCTATCCATTGTGTTTGTGTCACCAAAGAATACAGCCATATTCTTGTAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000414576.6
ENST00000434469.1
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAATTATCCATAAGAGCTaGCCAGGTAGCAGGAATAGA +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTIIHKS*PGSRNR
Trigger: TCTATTCCTGCTACCTGGCAAGCTCTTATGGATAAT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACTTCTGCTGATAATCTaGGAGGGTGTGGTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLLLII*EGVVPL
Trigger: TAAAGGAACCACACCCTCCAAGATTATCAGCAGAAG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAAGTGTCTATTTTGGTaGGCTTCTGCACTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVKCLFW*ASALLL
Trigger: AAGAAGCAGTGCAGAAGCCAACCAAAATAGACACTT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAGGAACACCTCCCTGTaGTGTTATTTGCCATATCAT +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTRNTSL*CYLPYH
Trigger: ATGATATGGCAAATAACACAACAGGGAGGTGTTCCT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACATATAGACAGGAATCCTaGTATGCTGCCTGTGACAAT +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTYRQES*YAACDN
Trigger: ATTGTCACAGGCAGCATACAAGGATTCCTGTCTATA...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAAAAGCCTTGCAACATaGCAGAGAGTTGAGAGATGT +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVKSLAT*QRVERC
Trigger: ACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTCAAAGCCTGAATGGTaGATATGGCCAAACAATCCA +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVSKPEW*IWPNNP
Trigger: TGGATTGTTTGGCCATATCAACCATTCAGGCTTTGA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAAGAAGCAAGAGAGGTaGGACATTACTAATGCCCAA +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVKKQER*DITNAQ
Trigger: TTGGGCATTAGTAATGTCCAACCTCTCTTGCTTCTT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAATCCCCATGTTTGCATaGACACAAGTAGTTCGACTC +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQIPMFA*TQVVRL
Trigger: GAGTCGAACTACTTGTGTCAATGCAAACATGGGGAT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGTTCTCAGCACAAGTTaGATGGAGGGAAGAATGCAA +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQVLSTS*MEGRMQ
Trigger: TTGCATTCTTCCCTCCATCAAACTTGTGCTGAGAAC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCCAAGGAACCATGGATaGCAATCAAGTTCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKPRNHG*QSSSQH
Trigger: GTGCTGAGAACTTGATTGCAATCCATGGTTCCTTGG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAATTGCATATTCTCTTTTaGTGCACACTGCCACGACCA +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQLHILF*CTLPRP
Trigger: TGGTCGTGGCAGTGTGCACAAAAAGAGAATATGCAA...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCATCCATCAAGGTGCTaGGCACCTTCTGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKHPSRC*APSEVK
Trigger: CTTTACTTCAGAAGGTGCCAAGCACCTTGATGGATG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAATACCTCAGGTTCTCTaGGCGTGCTTTTCGATTAAA +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTIPQVL*ACFSIK
Trigger: TTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTAT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp AAGAAGCAAGAGAGGTTGGACATTACTAATGCCCAAAATCCCAACTaGAGTGTGGTCACCCTCTACAGCCATATTCATAAGTTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: KKQERLDITNAQNPN*SVVTLYSHIHKFFK
Trigger: CTTAAAGAACTTATGAATATGGCTGTAGAGGGTGACCACACTTCAGTTGGGATTTTGGGCATTAGTAATGTCCAACCTCTCTTGCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp AACACTCCCTATAATCAGTGGCCTGTATTTACAGGGTATGTAACTTaGAGTCTACAAACTGTGGTAGAAGACAGTGTTTCCATGAGAAAC +
Preference number: 5 (lower is better)
Translates to: NTPYNQWPVFTGYVT*SLQTVVEDSVSMRN
Trigger: GTTTCTCATGGAAACACTGTCTTCTACCACAGTTTGTAGACTCCAAGTTACATACCCTGTAAATACAGGCCACTGATTATAGGGAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463830.2
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAACTACCCCAATTGGTTaGGAAAGATCTCGAAATACA +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTTTPIG*ERSRNT
Trigger: TGTATTTCGAGATCTTTCCAAACCAATTGGGGTAGT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCTTCTGCTGATAATCTaGGAGGGTGTGGTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLLLII*EGVVPL
Trigger: TAAAGGAACCACACCCTCCAAGATTATCAGCAGAAG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTACTGCGCTGAGTTTTaGGATTTGTCACAGTTTGAT +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVYCAEF*DLSQFD
Trigger: ATCAAACTGTGACAAATCCAAAAACTCAGCGCAGTA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAAGGAACACCTCCCTGTaGTGTTATTTGCCATATCAT +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQRNTSL*CYLPYH
Trigger: ATGATATGGCAAATAACACAACAGGGAGGTGTTCCT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAATGCATTCTTATCCTaGAGGGTGGTCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTNAFLS*RVVFSS
Trigger: TGAAGAAAAGACCACCCTCAAGGATAAGAATGCATT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGAATGCATTCTTATCCTaGAGGGTGGTCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVNAFLS*RVVFSS
Trigger: TGAAGAAAAGACCACCCTCAAGGATAAGAATGCATT...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTCGCATGGCTAATGGGTaGATGCTGAGATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RILPDELTQEVSNSNEVSRMANG*MLRFKL
Trigger: CAGCTTGAATCTCAGCATCAACCCATTAGCCATGCG...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACACCCACTACAATCAATTaGCCATCTTCTAAACCTACA +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTPTTIN*PSSKPT
Trigger: TGTAGGTTTAGAAGATGGCAAATTGATTGTAGTGGG...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCAATCTGGCTGAGCCGCTaGCTCGATCCCCAAAATTTT +
Preference number: 5 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSIWLSR*LDPQNF
Trigger: AAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGAT...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACAACATTGCAGAGAGTaGAGAGATGTGGTTAAAGTG +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQQHCRE*RDVVKV
Trigger: CACTTTAACCACATCTCTCAACTCTCTGCAATGTTG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAAAAGCCTTGCAACATaGCAGAGAGTTGAGAGATGT +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKKSLAT*QRVERC
Trigger: ACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAATACTATGTGACAAATaGAAATACTGGAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTILCDK*KYWRAL
Trigger: GAGTGCCCTCCAGTATTTCAATTTGTCACATAGTAT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp AACTTAGTGGCAGTCACACAGCACGCAGTTCAATCAATAACCTTGTaGTGCAATTTCAAAGGTTCATTCCAAGAAAAATGCTTAATGCCC +
Preference number: 5 (lower is better)
Translates to: NLVAVTQHAVQSITL*CNFKGSFQEKCLMP
Trigger: GGGCATTAAGCATTTTTCTTGGAATGAACCTTTGAAATTGCATCACAAGGTTATTGATTGAACTGCGTGCTGTGTGACTGCCACTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682077.1
CDS GCA 90 bp TCAGGAATAAGTTCTTTAACATCATATGGATTATCCATAAGAGCTTaGCAGGTAGCAGGAATAGAATGGAACTGTCGATCTGCACAGTCA +
Preference number: 5 (lower is better)
Translates to: SGISSLTSYGLSIRA*QVAGIEWNCRSAQS
Trigger: TGACTGTGCAGATCGACAGTTCCATTCTATTCCTGCTACCTGGCAAGCTCTTATGGATAATCCATATGATGTTAAAGAACTTATTCCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp CTTTCTTTGTACAATAAAGCATCCAAAGTTCAAAGAGCCTCTCTCTaGATGCCATTCTGGCTTTCACTCTGGCACTTTAAGTTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: LSLYNKASKVQRASL*MPFWLSLWHFKFSL
Trigger: TAAGGAAAACTTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCCAGAGAGAGGCTCTTTGAACTTTGGATGCTTTATTGTACAAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000478884.5
ENST00000497505.5
ENST00000682333.1
ENST00000682787.1
ENST00000683091.1
ENST00000683969.1
CDS CCA 90 bp TTACCTTTGTACAATAAAGCATCCAAAGTTCAAAGAGCCTCTCTCTaGATGCCATTCTGGCTTTCACTCTGGCACTTTAAGTTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: LPLYNKASKVQRASL*MPFWLSLWHFKFSL
Trigger: TAAGGAAAACTTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCCAGAGAGAGGCTCTTTGAACTTTGGATGCTTTATTGTACAAAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682077.1
CDS CCA 90 bp AAACCTTTGTACAATAAAGCATCCAAAGTTCAAAGAGCCTCTCTCTaGATGCCATTCTGGCTTTCACTCTGGCACTTTAAGTTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: KPLYNKASKVQRASL*MPFWLSLWHFKFSL
Trigger: TAAGGAAAACTTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCCAGAGAGAGGCTCTTTGAACTTTGGATGCTTTATTGTACAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683927.1
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAACTACCCCAATTGGTTaGGAAAGATCTCGAAATACA +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQTTPIG*ERSRNT
Trigger: TGTATTTCGAGATCTTTCCAAACCAATTGGGGTAGT...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGATTATCCATAAGAGCTaGCCAGGTAGCAGGAATAGA +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKIIHKS*PGSRNR
Trigger: TCTATTCCTGCTACCTGGCAAGCTCTTATGGATAAT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TCAGGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGTCCCTGTTGTGTTATTaGCCATATCATACATGTAGT +
Preference number: 5 (lower is better)
Translates to: SGIKALQHCRELRDVVKVSLLCY*PYHTCS
Trigger: ACTACATGTATGATATGGCAAATAACACAACAGGGA...CACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp TACAAAAGCAAGGCAGTCTTAATGAAGCACGTAACTAACATGGCTTTGATTGTCTATAGACAGGAATCCTaGTATGCTGCCTGTGACAAT +
Preference number: 5 (lower is better)
Translates to: YKSKAVLMKHVTNMALIVYRQES*YAACDN
Trigger: ATTGTCACAGGCAGCATACAAGGATTCCTGTCTATA...GACAATCAAAGCCATGTTAGTTACGTGCTTCATTAAGACTGCCTTGCTTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTTAGCAGCTGGAGATTaGTTCATTACTGCGGTCAAA +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLAAGD*FITAVK
Trigger: TTTGACCGCAGTAATGAACAAATCTCCAGCTGCTAA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGGCAGAAACCTTCTGTaGTCCATTGTCATAGATATA +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKGRNLL*SIVIDI
Trigger: TATATCTATGACAATGGACAACAGAAGGTTTCTGCC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAATTTTTGCAGGCCTTaGCTGTGTAGTAAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKNFCRP*LCSKEG
Trigger: TCCTTCTTTACTACACAGCAAAGGCCTGCAAAAATT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAGTACCCCATAATACTTaGTATCTCTTCATGAGATCC +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKVPHNT*YLFMRS
Trigger: GGATCTCATGAAGAGATACAAAGTATTATGGGGTAC...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAAAATGAGGAGCTACCATaGGTAAAAGGTAAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKNEELP*VKGKEG
Trigger: ACCTTCTTTACCTTTTACCAATGGTAGCTCCTCATT...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp GGGATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGAAATTCGGAACTTaGCAAATGCAAATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GIKALQHCRELRDVVKVTKKFGT*QMQIVL
Trigger: CAGCACAATTTGCATTTGCAAAGTTCCGAATTTCTT...TGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp AGTCGTATGAGATGTTCAAAGCAATTGCTGTTAAGAAAAATGGCCTaGAGAACAGGTCTATCTGTACAATCTAACATGGCTGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: SRMRCSKQLLLRKMA*RTGLSVQSNMAVMV
Trigger: TACCATCACAGCCATGTTAGATTGTACAGATAGACCTGTTCTTCAGGCCATTTTTCTTAACAGCAATTGCTTTGAACATCTCATACGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 90 bp AGGAGCTGCATATTTTTCTCTAATGATACTTGTTCAATTAGTAACTaGACTGCCATCAACACATTAACATCCATCAAGGTGCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: RSCIFFSNDTCSISN*TAINTLTSIKVLGT
Trigger: GGTGCCAAGCACCTTGATGGATGTTAATGTGTTGATGGCAGTTCAGTTACTAATTGAACAAGTATCATTAGAGAAAAATATGCAGCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 90 bp CTATTAATACAACAAATTCTTTTCAGCCAATCAGAGATGAAGATTTaGAGGTCATGGGATTGTAGTTCTGGAAGCCACTGGATAAGAAGC +
Preference number: 5 (lower is better)
Translates to: LLIQQILFSQSEMKI*RSWDCSSGSHWIRS
Trigger: GCTTCTTATCCAGTGGCTTCCAGAACTACAATCCCATGACCTGCAAATCTTCATCTCTGATTGGCTGAAAAGAATTTGTTGTATTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 90 bp TATGATTTGATGGGTGAGGTTTTTAATAAGAGAAGTATTAACAAGTaGTTCATTAAGAAGGAGTCCCAGTCCCGAGTAGCCAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: YDLMGEVFNKRSINK*FIKKESQSRVANFS
Trigger: AGAGAAGTTGGCTACTCGGGACTGGGACTCCTTCTTAATGAAGCACTTGTTAATACTTCTCTTATTAAAAACCTCACCCATCAAATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 90 bp GCTAAGTTGTTTAAGCATATTATTATACCTCAGGTTCTCTTGGCGTaGTTTTCGATTAAATGGCTCCACAAACAGCTCCTGAAATTTGAG +
Preference number: 5 (lower is better)
Translates to: AKLFKHIIIPQVLLA*FSIKWLHKQLLKFE
Trigger: CTCAAATTTCAGGAGCTGTTTGTGGAGCCATTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTATAATAATATGCTTAAACAACTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAAGAGAAAGTAGTTGGATaGGTCAACATGAAAAATCTC +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQEKVVG*VNMKNL
Trigger: GAGATTTTTCATGTTGACCAATCCAACTACTTTCTC...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp AAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACATAATTCATGCTTATaGTTATCAGTAACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: KALQHCRELRDVVKVTKQHNSCL*LSVTQG
Trigger: GCCCTGAGTTACTGATAACAATAAGCATGAATTATG...TTGCTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGTACTGCGCTGAGTTTTaGGATTTGTCACAGTTTGAT +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKYCAEF*DLSQFD
Trigger: ATCAAACTGTGACAAATCCAAAAACTCAGCGCAGTA...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATCCCTGTTGTGTTATTaGCCATATCATACATGTAGT +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKSLLCY*PYHTCS
Trigger: ACTACATGTATGATATGGCAAATAACACAACAGGGA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATCTGAGTCGAATATGTaGTTTACTACGCTCATAAAC +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKSESNM*FTTLIN
Trigger: GTTTATGAGCGTAGTAAACAACATATTCGACTCAGA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp CAAAGTCTCTGCACAATTTCAGAGGGATTCACAAGTTCTCCCAAACACATGAAATCATCAGAGTTCTTCTaGGTATCTTCAGTTGACATA +
Preference number: 5 (lower is better)
Translates to: QSLCTISEGFTSSPKHMKSSEFF*VSSVDI
Trigger: TATGTCAACTGAAGATACCAAGAAGAACTCTGATGA...TTTCATGTGTTTGGGAGAACTTGTGAATCCCTCTGAAATTGTGCAGAGACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCAACTGGATCTGAATTaGAGAGAGTTTTACCCATAC +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKQLDLN*REFYPY
Trigger: GTATGGGTAAAACTCTCTCAAATTCAGATCCAGTTG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGATGAATCTCTCGAATTaGAGAATGAGGCCACTTGAA +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKMNLSN*RMRPLE
Trigger: TTCAAGTGGCCTCATTCTCAAATTCGAGAGATTCAT...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS TCA 90 bp TACGAACAAGGGGAATCAGAAATGAGTAGATTTCAGTCTGTTCCTTaGTTGATTGACTTAGAACATGTTCCAGCTTCCCTAAAATGTAAC +
Preference number: 5 (lower is better)
Translates to: YEQGESEMSRFQSVP*LIDLEHVPASLKCN
Trigger: GTTACATTTTAGGGAAGCTGGAACATGTTCTAAGTCAATCAATCAAGGAACAGACTGAAATCTACTCATTTCTGATTCCCCTTGTTCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp GTAGCAAAGTTAGTTTTATTTCATCTGATGGTCGAAGTAGTTCACTaGATATTCCTGGTTTACTTAGTGCTGAAAACACTTGTCCTCGTT +
Preference number: 5 (lower is better)
Translates to: VAKLVLFHLMVEVVH*IFLVYLVLKTLVLV
Trigger: AACGAGGACAAGTGTTTTCAGCACTAAGTAAACCAGGAATATCCAGTGAACTACTTCGACCATCAGATGAAATAAAACTAACTTTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 90 bp GGACACAGTCCCTCTAATAGTAAAATACAGCTCCTTAAAGCTTTTTaGTGTAACTCATACCTTAAGCTCACCTACTGGAAGAGTTATATT +
Preference number: 5 (lower is better)
Translates to: GHSPSNSKIQLLKAF*CNSYLKLTYWKSYI
Trigger: AATATAACTCTTCCAGTAGGTGAGCTTAAGGTATGAGTTACACCAAAAAGCTTTAAGGAGCTGTATTTTACTATTAGAGGGACTGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGGAGAAAGTAGTTGGATaGGTCAACATGAAAAATCTC +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKEKVVG*VNMKNL
Trigger: GAGATTTTTCATGTTGACCAATCCAACTACTTTCTC...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414576.6
ENST00000449802.5
CDS-3UTR CAA 90 bp ATAAAAGCCTTGCAACATTGCAGAGAGTTGAGAGATGTGGTTAAAGTGACAAAGCTCTGTTTTCTGAGATaGCCCATTCTAACATCTTTT +
Preference number: 5 (lower is better)
Translates to: IKALQHCRELRDVVKVTKLCFLR*PILTSF
Trigger: AAAAGATGTTAGAATGGGCAATCTCAGAAAACAGAG...CTTTGTCACTTTAACCACATCTCTCAACTCTCTGCAATGTTGCAAGGCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449802.5
CDS GCA 90 bp GGAAGAATGCAAGTCAAGGGTTTCAATGATTCTAATCCCCATGTTTaGATTGACACAAGTAGTTCGACTCTGTCTATTAATACAACAAAT +
Preference number: 5 (lower is better)
Translates to: GRMQVKGFNDSNPHV*IDTSSSTLSINTTN
Trigger: ATTTGTTGTATTAATAGACAGAGTCGAACTACTTGTGTCAATGCAAACATGGGGATTAGAATCATTGAAACCCTTGACTTGCATTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS-3UTR CAA 90 bp ATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTTCAAATGCATTCTTATCCTaGAGGGTGGTCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ILPDELTQEVSNSNEVSSNAFLS*RVVFSS
Trigger: TGAAGAAAAGACCACCCTCAAGGATAAGAATGCATT...TGAAGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS-3UTR CAA 90 bp AGAATCTTACCAGATGAATTAACGCAGGAAGTTTCCAATTCTAATGAAGTGTCTCCCACTACAATCAATTaGCCATCTTCTAAACCTACA +
Preference number: 5 (lower is better)
Translates to: RILPDELTQEVSNSNEVSPTTIN*PSSKPT
Trigger: TGTAGGTTTAGAAGATGGCAAATTGATTGTAGTGGG...AGACACTTCATTAGAATTGGAAACTTCCTGCGTTAATTCATCTGGTAAGATTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434469.1
CDS TCA 90 bp TCCATAATCTTAAAAATGATTTCTCTTAGTCTGTCAGAGTACTTCTaGTTTAAGAGCAATGCGTACAGTATGTCAGCATTTCCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: SIILKMISLSLSEYF*FKSNAYSMSAFPGS
Trigger: TGAACCAGGAAATGCTGACATACTGTACGCATTGCTCTTAAATCAGAAGTACTCTGACAGACTAAGAGAAATCATTTTTAAGATTATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp TGCCGCGCGGCAGCCGCCGCCCGGCAGCCGTCTAACTaGTTCCCTCGACCCCTTCCCAAGGCGAAGCCCCGT +
Preference number: 6 (lower is better)
Translates to: CRAAAAARQPSN*FPRPLPKAKPR
Trigger: ACGGGGCTTCGCCTTGGGAAGGGGTCGAGGGAAGCAGTTAGACGGCTGCCGGGCGGCGGCTGCCGCGCGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000497505.5
ENST00000682077.1
ENST00000682333.1
ENST00000683927.1
ENST00000683969.1
CDS CCA 72 bp GCAGCCGCAGTCGACAGGCTCTGGCTGCCCATCCCTTaGCGGGCGCCGGCCGCGGCACTGAAACGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: AAAVDRLWLPIP*RAPAAALKRAF
Trigger: GAAGGCTCGTTTCAGTGCCGCGGCCGGCGCCCGCCAAGGGATGGGCAGCCAGAGCCTGTCGACTGCGGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682787.1
CDS CAA 90 bp ATAAATCTGCGCAGCCGCAGTCGACAGGCTCTGGCTGCCCATCCCTaGGCGGGCGCCGGCCGCGGCACTGAAACGAGCCTTCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: INLRSRSRQALAAHP*AGAGRGTETSLPSA
Trigger: AGCTGAGGGAAGGCTCGTTTCAGTGCCGCGGCCGGCGCCCGCCAAGGGATGGGCAGCCAGAGCCTGTCGACTGCGGCTGCGCAGATTTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682787.1
CDS TCA 72 bp TCTCCTAGCACCCTACCCACCAATAGGCCCAGTGTGTaGTGTTCCCCTCCTCATCTCCATGTGTTCTCATTG +
Preference number: 6 (lower is better)
Translates to: SPSTLPTNRPSV*CSPPHLHVFSL
Trigger: CAATGAGAACACATGGAGATGAGGAGGGGAACATCACACACTGGGCCTATTGGTGGGTAGGGTGCTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460416.2
CDS CCA 72 bp CCGATGAGGGGTAATGGGAGAAGAGAAAGGTGGATCTaGGATTTGGGATGGTGGAGGAGTGGTGGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: PMRGNGRRERWI*DLGWWRSGGSL
Trigger: CAAAGAACCACCACTCCTCCACCATCCCAAATCCCAGATCCACCTTTCTCTTCTCCCATTACCCCTCATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 72 bp TTCGGGCCATTGTCAGGATTGCTCGAGTCACGGGAGTaGCATAAGGGTGAACAGACTCAGATTCATCCACTC +
Preference number: 6 (lower is better)
Translates to: FGPLSGLLESRE*HKGEQTQIHPL
Trigger: GAGTGGATGAATCTGAGTCTGTTCACCCTTATGTCACTCCCGTGACTCGAGCAATCCTGACAATGGCCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 72 bp GAGGCTGATGACAGAATTCCACCAAATGATGTCCGATaGGGGGTAATGGGAGAAGAGAAAGGTGGATCTGGG +
Preference number: 6 (lower is better)
Translates to: EADDRIPPNDVR*GVMGEEKGGSG
Trigger: CCCAGATCCACCTTTCTCTTCTCCCATTACCCCTCATCGGACATCATTTGGTGGAATTCTGTCATCAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CCA 72 bp GTGCACAGAAAACGATTTAGTAGACTCTACTGGGGATaGTGTGCTAGGCAGACTGTCTGGCACTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: VHRKRFSRLYWG*CARQTVWHLTS
Trigger: GGAAGTCAAGTGCCAGACAGTCTGCCTAGCACACCATCCCCAGTAGAGTCTACTAAATCGTTTTCTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp GTCAGAGTGCACAGAAAACGATTTAGTAGACTCTACTaGGGATGGTGTGCTAGGCAGACTGTCTGGCACTTG +
Preference number: 6 (lower is better)
Translates to: VRVHRKRFSRLY*GWCARQTVWHL
Trigger: CAAGTGCCAGACAGTCTGCCTAGCACACCATCCCCAGTAGAGTCTACTAAATCGTTTTCTGTGCACTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 72 bp CTGTCGATCTGCACAGTCAAACCTTCCACTCTGAAGTaGGATGTGGAGGGTGGTGAACGGTTCTACACGAAT +
Preference number: 6 (lower is better)
Translates to: LSICTVKPSTLK*DVEGGERFYTN
Trigger: ATTCGTGTAGAACCGTTCACCACCCTCCACATCCAACTTCAGAGTGGAAGGTTTGACTGTGCAGATCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 72 bp TCGCATAAGAACTTCCATAGTGGCTGGAGAAATTGCTaGCAAAGCATTCCTCTGCCCACCGGCTACAATGGC +
Preference number: 6 (lower is better)
Translates to: SHKNFHSGWRNC*QSIPLPTGYNG
Trigger: GCCATTGTAGCCGGTGGGCAGAGGAATGCTTTGCAAGCAATTTCTCCAGCCACTATGGAAGTTCTTATGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 72 bp CTGAGCTCACTGACTGACTCCCCAAGGAACCATGGATaGCAATCAAGTTCTCAGCACAAGTTTGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: LSSLTDSPRNHG*QSSSQHKFDGG
Trigger: CCCTCCATCAAACTTGTGCTGAGAACTTGATTGCAATCCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 72 bp GCTTGCTGTTGTTCCTCTAACCCATCTGCCATTTTCTaGACACACTGTAGAAGCTGGATCCTCAGAACCTGC +
Preference number: 6 (lower is better)
Translates to: ACCCSSNPSAIF*THCRSWILRTC
Trigger: GCAGGTTCTGAGGATCCAGCTTCTACAGTGTGTTCAGAAAATGGCAGATGGGTTAGAGGAACAACAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449802.5
ENST00000460416.2
ENST00000463830.2
ENST00000478884.5
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000682787.1
ENST00000683001.1
ENST00000683091.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp CTCAGTAGTCGACGGATTTCTTCTGAGCTCACTGACTaGCTCCCCAAGGAACCATGGATTGCAATCAAGTTC +
Preference number: 6 (lower is better)
Translates to: LSSRRISSELTD*LPKEPWIAIKF
Trigger: GAACTTGATTGCAATCCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAGAAGAAATCCGTCGACTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 72 bp AAAGCTGACCTCTGGTTGGGCTGGTACGTAGGAGACTaGAGAGCACGTCCAAAATTCCAAAGAGCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: KADLWLGWYVGD*RARPKFQRAVL
Trigger: AAGAACAGCTCTTTGGAATTTTGGACGTGCTCTTCAGTCTCCTACGTACCAGCCCAACCAGAGGTCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp ATCTCTGCCCTATATTTCATGCCCATTCCAGGTGACTaGTCTAGGGGTTGGTATATGACCCAGTTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: ISALYFMPIPGD*SRGWYMTQFWR
Trigger: TCTCCAGAACTGGGTCATATACCAACCCCTAGACCAGTCACCTGGAATGGGCATGAAATATAGGGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS CAA 90 bp GGATTTCTTCTGAGCTCACTGACTGACTCCCCAAGGAACCATGGATaGCAATCAAGTTCTCAGCACAAGTTTGATGGAGGGAAGAATGCA +
Preference number: 6 (lower is better)
Translates to: GFLLSSLTDSPRNHG*QSSSQHKFDGGKNA
Trigger: TGCATTCTTCCCTCCATCAAACTTGTGCTGAGAACTTGATTGCAATCCATGGTTCCTTGGGGAGTCAGTCAGTGAGCTCAGAAGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 72 bp TCAGCATTTCCTGGTTCAAAAAGCAGTAAGAAAAGCTaGCCTCTGGTTGGGCTGGTACGTAGGAGACTGAAG +
Preference number: 6 (lower is better)
Translates to: SAFPGSKSSKKS*PLVGLVRRRLK
Trigger: CTTCAGTCTCCTACGTACCAGCCCAACCAGAGGTCAGCTTTTCTTACTGCTTTTTGAACCAGGAAATGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp ACTGGGGATGGTGTGCTAGGCAGACTGTCTGGCACTTaGCTTCCACTATCACTCATTTCACATGAGTCAATT +
Preference number: 6 (lower is better)
Translates to: TGDGVLGRLSGT*LPLSLISHESI
Trigger: AATTGACTCATGTGAAATGAGTGATAGTGGAAGTCAAGTGCCAGACAGTCTGCCTAGCACACCATCCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp TTCTTCAGGATCTCCATCCTCCCAGGAATCACAATCTaGCAATACTCGCATAAGAACTTCCATAGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: FFRISILPGITI*QYSHKNFHSGW
Trigger: CCAGCCACTATGGAAGTTCTTATGCGAGTATTGGCAGATTGTGATTCCTGGGAGGATGGAGATCCTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp AAAGTCACCAATTCTGACTGCCTTACTGTGATGCCCTaGCTCCAACAGCTTGTTCCAGAGTTCATGGTCAAA +
Preference number: 6 (lower is better)
Translates to: KVTNSDCLTVMP*LQQLVPEFMVK
Trigger: TTTGACCATGAACTCTGGAACAAGCTGTTGGAGGCAGGGCATCACAGTAAGGCAGTCAGAATTGGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS CAA 72 bp CATGGCAGGAAATCTGAGAGGGGCAGAAACCTTCTGTaGTCCATTGTCATAGATATAGACGAAGCTCTGACC +
Preference number: 6 (lower is better)
Translates to: HGRKSERGRNLL*SIVIDIDEALT
Trigger: GGTCAGAGCTTCGTCTATATCTATGACAATGGACAACAGAAGGTTTCTGCCCCTCTCAGATTTCCTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CAA 90 bp CAGGAAGGTGTTGAAACAGGTTTAGGGTTGAAGTGTCTATTTTGGTaGGCTTCTGCACTGCTTCTTCTGCTGATAATCTTGGAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: QEGVETGLGLKCLFW*ASALLLLLIILEGV
Trigger: CACACCCTCCAAGATTATCAGCAGAAGAAGCAGTGCAGAAGCCAACCAAAATAGACACTTCAACCCTAAACCTGTTTCAACACCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684709.1
CDS TCA 72 bp GCAGCTGGAGATTTGTTCATTACTGCGGTCAAAGCCTaGATGGTTGATATGGCCAAACAATCCAATTGTCCC +
Preference number: 6 (lower is better)
Translates to: AAGDLFITAVKA*MVDMAKQSNCP
Trigger: GGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCTCCAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp ACTAAGGTGTCTTGCCAACCCACTTGCTGTGATATTTaGTGTGCTGCATCTGGCTGGAACTGCAAAATTTGC +
Preference number: 6 (lower is better)
Translates to: TKVSCQPTCCDI*CAASGWNCKIC
Trigger: GCAAATTTTGCAGTTCCAGCCAGATGCAGCACATCAAATATCACAGCAAGTGGGTTGGCAAGACACCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp TTATCCATAAGAGCTTGCCAGGTAGCAGGAATAGAATaGAACTGTCGATCTGCACAGTCAAACCTTCCACTC +
Preference number: 6 (lower is better)
Translates to: LSIRACQVAGIE*NCRSAQSNLPL
Trigger: GAGTGGAAGGTTTGACTGTGCAGATCGACAGTTCCATTCTATTCCTGCTACCTGGCAAGCTCTTATGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp CTTTTTGTGCACACTGCCACGACCAACATACCTGAATaGGTAATAAAGGCTTCAAAACCCATGCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: LFVHTATTNIPE*VIKASKPMPLP
Trigger: AGGAAGTGGCATGGGTTTTGAAGCCTTTATTACCCATTCAGGTATGTTGGTCGTGGCAGTGTGCACAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CAA 72 bp TGGTTGGCTTCTGCACTGCTTCTTCTGCTGATAATCTaGGAGGGTGTGGTTCCTTTAATAATTGACAGGGTG +
Preference number: 6 (lower is better)
Translates to: WLASALLLLLII*EGVVPLIIDRV
Trigger: CACCCTGTCAATTATTAAAGGAACCACACCCTCCAAGATTATCAGCAGAAGAAGCAGTGCAGAAGCCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp CCTGAACGCATCTCAGCAGGCTTGCCAACACCCACTACAATCAATTaGCCATCTTCTAAACCTACAAGAATATGGCTGTATTCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: PERISAGLPTPTTIN*PSSKPTRIWLYSLV
Trigger: CACCAAAGAATACAGCCATATTCTTGTAGGTTTAGAAGATGGCAAATTGATTGTAGTGGGTGTTGGCAAGCCTGCTGAGATGCGTTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000414576.6
ENST00000434469.1
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS TCA 72 bp GAGAGGTTGGACATTACTAATGCCCAAAATCCCAACTaGAGTGTGGTCACCCTCTACAGCCATATTCATAAG +
Preference number: 6 (lower is better)
Translates to: ERLDITNAQNPN*SVVTLYSHIHK
Trigger: CTTATGAATATGGCTGTAGAGGGTGACCACACTTCAGTTGGGATTTTGGGCATTAGTAATGTCCAACCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp TTTGAGTCTAAAGAGTGTCTATCCTCCAAACTCCACTaGTCCGAAGACACATTAGCTGAGGCAAAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: FESKECLSSKLH*SEDTLAEAKEV
Trigger: CACCTCTTTTGCCTCAGCTAATGTGTCTTCGGATCAGTGGAGTTTGGAGGATAGACACTCTTTAGACTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp TCGGTCCACATGTTTGAATTAACTAGTCCCTCTGACTaGAGAAAGTCCTGTATGATCAGCACTAGTCGGAAG +
Preference number: 6 (lower is better)
Translates to: SVHMFELTSPSD*RKSCMISTSRK
Trigger: CTTCCGACTAGTGCTGATCATACAGGACTTTCTTCAGTCAGAGGGACTAGTTAATTCAAACATGTGGACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp CACTACTTCCAAAAGCAATGTATCACTGGAAGGCTGTaGGTGTTGGATACCCAGATTATCTCTCAAGGCACT +
Preference number: 6 (lower is better)
Translates to: HYFQKQCITGRL*VLDTQIISQGT
Trigger: AGTGCCTTGAGAGATAATCTGGGTATCCAACACTCACAGCCTTCCAGTGATACATTGCTTTTGGAAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp TTCCTCTGCCCACCGGCTACAATGGCTCCAAAGAGATaGAATAAGCAACATTTAAGACTTTCCTTGAGATGT +
Preference number: 6 (lower is better)
Translates to: FLCPPATMAPKR*NKQHLRLSLRC
Trigger: ACATCTCAAGGAAAGTCTTAAATGTTGCTTATTGCATCTCTTTGGAGCCATTGTAGCCGGTGGGCAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000483147.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp GATTTACCTCATTTTCTGAAAGTCACCAATTCTGACTaGCTTACTGTGATGCCCTGCCTCCAACAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: DLPHFLKVTNSD*LTVMPCLQQLV
Trigger: AACAAGCTGTTGGAGGCAGGGCATCACAGTAAGGCAGTCAGAATTGGTGACTTTCAGAAAATGAGGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS GCA 72 bp ATTTCATTCAAGTGTCCATCTCTGCCCTATATTTCATaGCCATTCCAGGTGACTGGTCTAGGGGTTGGTATA +
Preference number: 6 (lower is better)
Translates to: ISFKCPSLPYIS*PFQVTGLGVGI
Trigger: TATACCAACCCCTAGACCAGTCACCTGGAATGGGCATGAAATATAGGGCAGAGATGGACACTTGAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS CCA 72 bp AGAATATGGCTGTATTCTTTGGTGACACAAACACAATaGATAGGCAGTCGCATGGCTAATGGGTTGATGCTG +
Preference number: 6 (lower is better)
Translates to: RIWLYSLVTQTQ*IGSRMANGLML
Trigger: CAGCATCAACCCATTAGCCATGCGACTGCCTATCCATTGTGTTTGTGTCACCAAAGAATACAGCCATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000414576.6
ENST00000434469.1
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS CCA 72 bp AACCTGCAGAATATTATCAGGAAGCAGAGATATTCCTaGAGGCATATCATCTACCCTGGTAGGCAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: NLQNIIRKQRYS*RHIIYPGRQLF
Trigger: GAAAAGCTGCCTACCAGGGTAGATGATATGCCTCCAGGAATATCTCTGCTTCCTGATAATATTCTGCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000449802.5
ENST00000460416.2
ENST00000463830.2
ENST00000478884.5
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683091.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp TTCTGTATGGGAGGCACAGAAATTCCTGCCATACTATGTGACAAATaGAAATACTGGAGGGCACTCTCTAGACTTAGTTTTCGGGCCATT +
Preference number: 6 (lower is better)
Translates to: FCMGGTEIPAILCDK*KYWRALSRLSFRAI
Trigger: AATGGCCCGAAAACTAAGTCTAGAGAGTGCCCTCCAGTATTTCAATTTGTCACATAGTATGGCAGGAATTTCTGTGCCTCCCATACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CAA 90 bp AAGGAGTCCCAGTCCCGAGTAGCCAACTTCTCTGAGTCGAATATGTaGTTTACTACGCTCATAAACGTTCGTGCATTTCAACATTTGTTC +
Preference number: 6 (lower is better)
Translates to: KESQSRVANFSESNM*FTTLINVRAFQHLF
Trigger: GAACAAATGTTGAAATGCACGAACGTTTATGAGCGTAGTAAACAACATATTCGACTCAGAGAAGTTGGCTACTCGGGACTGGGACTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp CTTTTCCCTCCTTTGTTAGCAATGCCAAGAGTCAACTaGTCCTGGTCTAAGCAAAACCAAGCACTGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LFPPLLAMPRVN*SWSKQNQALKE
Trigger: TTCTTTCAGTGCTTGGTTTTGCTTAGACCAGGATCAGTTGACTCTTGGCATTGCTAACAAAGGAGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS TCA 72 bp AGTCCATACGAGCCAATCTCCTTCAACAGGTGTTACTaGTTCAGGAACTGTGCTTTCATTCTTTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SPYEPISFNRCY*FRNCAFILFFR
Trigger: CCTGAAGAAAAGAATGAAAGCACAGTTCCTGAATCAGTAACACCTGTTGAAGGAGATTGGCTCGTATGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp CAACAAATTCTTTTCAGCCAATCAGAGATGAAGATTTaGAGGTCATGGGATTGTAGTTCTGGAAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: QQILFSQSEMKI*RSWDCSSGSHW
Trigger: CCAGTGGCTTCCAGAACTACAATCCCATGACCTGCAAATCTTCATCTCTGATTGGCTGAAAAGAATTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp ACCTCACAGTATTGTAGTGAGAAGGAAATGAGACAATaGTCAAAGAGTGCTAACTTAGTGGCAGTCACACAG +
Preference number: 6 (lower is better)
Translates to: TSQYCSEKEMRQ*SKSANLVAVTQ
Trigger: CTGTGTGACTGCCACTAAGTTAGCACTCTTTGAGCATTGTCTCATTTCCTTCTCACTACAATACTGTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682077.1
CDS CCA 72 bp GGTGTTGAAACAGGTTTAGGGTTGAAGTGTCTATTTTaGTTGGCTTCTGCACTGCTTCTTCTGCTGATAATC +
Preference number: 6 (lower is better)
Translates to: GVETGLGLKCLF*LASALLLLLII
Trigger: GATTATCAGCAGAAGAAGCAGTGCAGAAGCCAACCAAAATAGACACTTCAACCCTAAACCTGTTTCAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684709.1
CDS CCA 72 bp TACAATAAAGCATCCAAAGTTCAAAGAGCCTCTCTCTaGATGCCATTCTGGCTTTCACTCTGGCACTTTAAG +
Preference number: 6 (lower is better)
Translates to: YNKASKVQRASL*MPFWLSLWHFK
Trigger: CTTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCCAGAGAGAGGCTCTTTGAACTTTGGATGCTTTATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000478884.5
ENST00000497505.5
ENST00000682077.1
ENST00000682333.1
ENST00000682787.1
ENST00000683091.1
ENST00000683927.1
ENST00000683969.1
CDS CCA 72 bp CTGGAGATTTGTTCATTACTGCGGTCAAAGCCTGAATaGTTGATATGGCCAAACAATCCAATTGTCCCTGAA +
Preference number: 6 (lower is better)
Translates to: LEICSLLRSKPE*LIWPNNPIVPE
Trigger: TTCAGGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 72 bp GGAACCATGGATTGCAATCAAGTTCTCAGCACAAGTTaGATGGAGGGAAGAATGCAAGTCAAGGGTTTCAAT +
Preference number: 6 (lower is better)
Translates to: GTMDCNQVLSTS*MEGRMQVKGFN
Trigger: ATTGAAACCCTTGACTTGCATTCTTCCCTCCATCAAACTTGTGCTGAGAACTTGATTGCAATCCATGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CAA 72 bp CAGTCCCGAGTAGCCAACTTCTCTGAGTCGAATATGTaGTTTACTACGCTCATAAACGTTCGTGCATTTCAA +
Preference number: 6 (lower is better)
Translates to: QSRVANFSESNM*FTTLINVRAFQ
Trigger: TTGAAATGCACGAACGTTTATGAGCGTAGTAAACAACATATTCGACTCAGAGAAGTTGGCTACTCGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp ACTCCCCAAGGAACCATGGATTGCAATCAAGTTCTCAGCACAAGTTaGATGGAGGGAAGAATGCAAGTCAAGGGTTTCAATGATTCTAAT +
Preference number: 6 (lower is better)
Translates to: TPQGTMDCNQVLSTS*MEGRMQVKGFNDSN
Trigger: ATTAGAATCATTGAAACCCTTGACTTGCATTCTTCCCTCCATCAAACTTGTGCTGAGAACTTGATTGCAATCCATGGTTCCTTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp AAGACAATTCTCCCACAGAGCTATCTTCTGGAAATAATGGTGTGTTaGAGTCTAAAGAGTGTCTATCCTCCAAACTCCACTGATCCGAAG +
Preference number: 6 (lower is better)
Translates to: KTILPQSYLLEIMVC*SLKSVYPPNSTDPK
Trigger: CTTCGGATCAGTGGAGTTTGGAGGATAGACACTCTTTAGACTCAAACACACCATTATTTCCAGAAGATAGCTCTGTGGGAGAATTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp AGATTTGTTCATTACTGCGGTCAAAGCCTGAATGGTTaGTATGGCCAAACAATCCAATTGTCCCTGAAACAC +
Preference number: 6 (lower is better)
Translates to: RFVHYCGQSLNG*YGQTIQLSLKH
Trigger: GTGTTTCAGGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp ACAGTTATGTTGTGCCAGAGGGAATCACAGAAACTGTaGTCAGGAAGCATAACCGTTGCATATTCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: TVMLCQRESQKL*SGSITVAYSLF
Trigger: AAAAAGAGAATATGCAACGGTTATGCTTCCTGACCACAGTTTCTGTGATTCCCTCTGGCACAACATAACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
ENST00000684091.1
CDS CCA 72 bp TTTAATAAAGCATCCAAAGTTCAAAGAGCCTCTCTCTaGATGCCATTCTGGCTTTCACTCTGGCACTTTAAG +
Preference number: 6 (lower is better)
Translates to: FNKASKVQRASL*MPFWLSLWHFK
Trigger: CTTAAAGTGCCAGAGTGAAAGCCAGAATGGCATCCAGAGAGAGGCTCTTTGAACTTTGGATGCTTTATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492870.1
CDS CCA 72 bp AGAGACCTGAGTTTGAATTTTGGTTCTGCAGCTTACTaGCTGTCTGATTTCAAGGAAAACTACTTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: RDLSLNFGSAAY*LSDFKENYFSK
Trigger: CTTGGAGAAGTAGTTTTCCTTGAAATCAGACAGCCAGTAAGCTGCAGAACCAAAATTCAAACTCAGGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682333.1
CDS CCA 72 bp AACCTGCAGAATATTATCAGGAAGCAGAGATATTCCTaGAGGCATATCATCTACCCTCTTCTTCAGCTTATG +
Preference number: 6 (lower is better)
Translates to: NLQNIIRKQRYS*RHIIYPLLQLM
Trigger: CATAAGCTGAAGAAGAGGGTAGATGATATGCCTCCAGGAATATCTCTGCTTCCTGATAATATTCTGCAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682787.1
CDS CAA 72 bp ATTCAAGCTGTGGAGATCTCTTATAGACAGGAATCCTaGTATGCTGCCTGTGACAATGTGTTCTCCGATTAT +
Preference number: 6 (lower is better)
Translates to: IQAVEISYRQES*YAACDNVFSDY
Trigger: ATAATCGGAGAACACATTGTCACAGGCAGCATACAAGGATTCCTGTCTATAAGAGATCTCCACAGCTTGAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000414576.6
ENST00000434469.1
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS CAA 72 bp ATCTCAGCAGGCTTGCCAACACCCACTACAATCAATTaGCCATCTTCTAAACCTACAAGAATATGGCTGTAT +
Preference number: 6 (lower is better)
Translates to: ISAGLPTPTTIN*PSSKPTRIWLY
Trigger: ATACAGCCATATTCTTGTAGGTTTAGAAGATGGCAAATTGATTGTAGTGGGTGTTGGCAAGCCTGCTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000414576.6
ENST00000434469.1
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS CAA 72 bp GAGATTTGTTCATTACTGCGGTCAAAGCCTGAATGGTaGATATGGCCAAACAATCCAATTGTCCCTGAAACA +
Preference number: 6 (lower is better)
Translates to: EICSLLRSKPEW*IWPNNPIVPET
Trigger: TGTTTCAGGGACAATTGGATTGTTTGGCCATATCAACCATTCAGGCTTTGACCGCAGTAATGAACAAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp GATGCTGAGATTCAAGCTGTGGAGATCTCTTATAGACAGGAATCCTaGTATGCTGCCTGTGACAATGTGTTCTCCGATTATACATATATC +
Preference number: 6 (lower is better)
Translates to: DAEIQAVEISYRQES*YAACDNVFSDYTYI
Trigger: GATATATGTATAATCGGAGAACACATTGTCACAGGCAGCATACAAGGATTCCTGTCTATAAGAGATCTCCACAGCTTGAATCTCAGCATC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000414576.6
ENST00000434469.1
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS CAA 90 bp CAGATGTTATTCGTTGCCCACCTGATAGTCATTCCCTCTTTTTATTaGCTAGCAGAACCTTTATTTCATTCAAGTGTCCATCTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: QMLFVAHLIVIPSFY*LAEPLFHSSVHLCP
Trigger: AGGGCAGAGATGGACACTTGAATGAAATAAAGGTTCTGCTAGCAAATAAAAAGAGGGAATGACTATCAGGTGGGCAACGAATAACATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS CAA 90 bp TTCAGGAATAAGTTCTTTAACATCATATGGATTATCCATAAGAGCTaGCCAGGTAGCAGGAATAGAATGGAACTGTCGATCTGCACAGTC +
Preference number: 6 (lower is better)
Translates to: FRNKFFNIIWIIHKS*PGSRNRMELSICTV
Trigger: GACTGTGCAGATCGACAGTTCCATTCTATTCCTGCTACCTGGCAAGCTCTTATGGATAATCCATATGATGTTAAAGAACTTATTCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp GGGGAATCAGAAATGAGTAGATTTCAGTCTGTTCCTTaGTTGATTGACTTAGAACATGTTCCAGCTTCCCTA +
Preference number: 6 (lower is better)
Translates to: GESEMSRFQSVP*LIDLEHVPASL
Trigger: TAGGGAAGCTGGAACATGTTCTAAGTCAATCAATCAAGGAACAGACTGAAATCTACTCATTTCTGATTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp GCAGTCACACAGCACGCAGTTCAATCAATAACCTTGTaGTGCAATTTCAAAGGTTCATTCCAAGAAAAATGC +
Preference number: 6 (lower is better)
Translates to: AVTQHAVQSITL*CNFKGSFQEKC
Trigger: GCATTTTTCTTGGAATGAACCTTTGAAATTGCATCACAAGGTTATTGATTGAACTGCGTGCTGTGTGACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682077.1
CDS GCA 72 bp TTTAAGCATATTATTATACCTCAGGTTCTCTTGGCGTaGTTTTCGATTAAATGGCTCCACAAACAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: FKHIIIPQVLLA*FSIKWLHKQLL
Trigger: CAGGAGCTGTTTGTGGAGCCATTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTATAATAATATGCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp TTACTTGTTTCACTACTTCCAAAAGCAATGTATCACTaGAAGGCTGTGAGTGTTGGATACCCAGATTATCTC +
Preference number: 6 (lower is better)
Translates to: LLVSLLPKAMYH*KAVSVGYPDYL
Trigger: GAGATAATCTGGGTATCCAACACTCACAGCCTTCCAGTGATACATTGCTTTTGGAAGTAGTGAAACAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp TATAATCAGTGGCCTGTATTTACAGGGTATGTAACTTaGAGTCTACAAACTGTGGTAGAAGACAGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: YNQWPVFTGYVT*SLQTVVEDSVS
Trigger: GGAAACACTGTCTTCTACCACAGTTTGTAGACTCCAAGTTACATACCCTGTAAATACAGGCCACTGATTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463830.2
CDS CAA 90 bp TTGACTGCTAAGTTGTTTAAGCATATTATTATACCTCAGGTTCTCTaGGCGTGCTTTTCGATTAAATGGCTCCACAAACAGCTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: LTAKLFKHIIIPQVL*ACFSIKWLHKQLLK
Trigger: TTTCAGGAGCTGTTTGTGGAGCCATTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTATAATAATATGCTTAAACAACTTAGCAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp TACACGAATGAGATAGTGCATGACCCCCGCAGAATTTaGATAGTGAGTACCATAGTGAAACTTATCAATAGT +
Preference number: 6 (lower is better)
Translates to: YTNEIVHDPRRI*IVSTIVKLINS
Trigger: ACTATTGATAAGTTTCACTATGGTACTCACTATTCAAATTCTGCGGGGGTCATGCACTATCTCATTCGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS GCA 72 bp TTGTTTATGGTCTGTCTTCCCCAGCTAGGTTATAAGTaGCTTAAAGCTAGAGAAGCCTTATTCATTTTTGGA +
Preference number: 6 (lower is better)
Translates to: LFMVCLPQLGYK*LKAREALFIFG
Trigger: TCCAAAAATGAATAAGGCTTCTCTAGCTTTAAGGCACTTATAACCTAGCTGGGGAAGACAGACCATAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684709.1
CDS CCA 72 bp AGTTGTTTAAGCATATTATTATACCTCAGGTTCTCTTaGCGTGCTTTTCGATTAAATGGCTCCACAAACAGC +
Preference number: 6 (lower is better)
Translates to: SCLSILLYLRFS*RAFRLNGSTNS
Trigger: GCTGTTTGTGGAGCCATTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTATAATAATATGCTTAAACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CCA 72 bp CCCTCTAATAGTAAAATACAGCTCCTTAAAGCTTTTTaGTGTAACTCATACCTTAAGCTCACCTACTGGAAG +
Preference number: 6 (lower is better)
Translates to: PSNSKIQLLKAF*CNSYLKLTYWK
Trigger: CTTCCAGTAGGTGAGCTTAAGGTATGAGTTACACCAAAAAGCTTTAAGGAGCTGTATTTTACTATTAGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460355.1
CDS CAA 72 bp ACAATTGGCCAGGTAACAGACTTTGTAAGAGCCAACTaGAGATACTATATTCACCAATTGAAATGTCCACCT +
Preference number: 6 (lower is better)
Translates to: TIGQVTDFVRAN*RYYIHQLKCPP
Trigger: AGGTGGACATTTCAATTGGTGAATATAGTATCTCAAGTTGGCTCTTACAAAGTCTGTTACCTGGCCAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS TCA 72 bp ACATCACTTGAATGCTATTATCCCAGTATCCAGCACTaGAGAGCAACTTTGCATCATGTGATACTACAAATA +
Preference number: 6 (lower is better)
Translates to: TSLECYYPSIQH*RATLHHVILQI
Trigger: TATTTGTAGTATCACATGATGCAAAGTTGCTCTTCAGTGCTGGATACTGGGATAATAGCATTCAAGTGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS TCA 72 bp TTGCTCCAAGTCTATAAAAGCAAACAACTGGAGGAATaGAAGCCATACCTGTTAAGAGTTTCTAAATGGAAC +
Preference number: 6 (lower is better)
Translates to: LLQVYKSKQLEE*KPYLLRVSKWN
Trigger: GTTCCATTTAGAAACTCTTAACAGGTATGGCTTTCATTCCTCCAGTTGTTTGCTTTTATAGACTTGGAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS GCA 72 bp CAAGTCAAGGGTTTCAATGATTCTAATCCCCATGTTTaGATTGACACAAGTAGTTCGACTCTGTCTATTAAT +
Preference number: 6 (lower is better)
Translates to: QVKGFNDSNPHV*IDTSSSTLSIN
Trigger: ATTAATAGACAGAGTCGAACTACTTGTGTCAATGCAAACATGGGGATTAGAATCATTGAAACCCTTGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 72 bp TTCTTCATTAGTAGCAGCTATGTACCCCATAATACTTaGTATCTCTTCATGAGATCCACCTTTGCACAGAAA +
Preference number: 6 (lower is better)
Translates to: FFISSSYVPHNT*YLFMRSTFAQK
Trigger: TTTCTGTGCAAAGGTGGATCTCATGAAGAGATACAAAGTATTATGGGGTACATAGCTGCTACTAATGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 72 bp AAGTTGTTTAAGCATATTATTATACCTCAGGTTCTCTaGGCGTGCTTTTCGATTAAATGGCTCCACAAACAG +
Preference number: 6 (lower is better)
Translates to: KLFKHIIIPQVL*ACFSIKWLHKQ
Trigger: CTGTTTGTGGAGCCATTTAATCGAAAAGCACGCCAAGAGAACCTGAGGTATAATAATATGCTTAAACAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp GAATGCAAGTCAAGGGTTTCAATGATTCTAATCCCCATGTTTGCATaGACACAAGTAGTTCGACTCTGTCTATTAATACAACAAATTCTT +
Preference number: 6 (lower is better)
Translates to: ECKSRVSMILIPMFA*TQVVRLCLLIQQIL
Trigger: AAGAATTTGTTGTATTAATAGACAGAGTCGAACTACTTGTGTCAATGCAAACATGGGGATTAGAATCATTGAAACCCTTGACTTGCATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS CAA 90 bp GAGCTGTTCTTCTTCATTAGTAGCAGCTATGTACCCCATAATACTTaGTATCTCTTCATGAGATCCACCTTTGCACAGAAAATATTTAAT +
Preference number: 6 (lower is better)
Translates to: ELFFFISSSYVPHNT*YLFMRSTFAQKIFN
Trigger: ATTAAATATTTTCTGTGCAAAGGTGGATCTCATGAAGAGATACAAAGTATTATGGGGTACATAGCTGCTACTAATGAAGAAGAACAGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp CAAAGCTTTCCTATGTTTATAGATGAAATCTTCAGCTaGTTTAGCCCATTTCGGGAGAATGACATCATTTAC +
Preference number: 6 (lower is better)
Translates to: QSFPMFIDEIFS*FSPFRENDIIY
Trigger: GTAAATGATGTCATTCTCCCGAAATGGGCTAAATCAGCTGAAGATTTCATCTATAAACATAGGAAAGCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000414576.6
ENST00000449802.5
ENST00000460355.1
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp GAAAACATTGATAAAAGAAAGGGACGAATTCCACTGTaGGAGAAGCTGGTTTATATTTCTGTCTGCTCTTTT +
Preference number: 6 (lower is better)
Translates to: ENIDKRKGRIPL*EKLVYISVCSF
Trigger: AAAAGAGCAGACAGAAATATAAACCAGCTTCTCTCACAGTGGAATTCGTCCCTTTCTTTTATCAATGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000463830.2
ENST00000497505.5
ENST00000681967.1
ENST00000682108.1
ENST00000682333.1
ENST00000683001.1
ENST00000683969.1
CDS CAA 72 bp TCAAGGGTTTCAATGATTCTAATCCCCATGTTTGCATaGACACAAGTAGTTCGACTCTGTCTATTAATACAA +
Preference number: 6 (lower is better)
Translates to: SRVSMILIPMFA*TQVVRLCLLIQ
Trigger: TTGTATTAATAGACAGAGTCGAACTACTTGTGTCAATGCAAACATGGGGATTAGAATCATTGAAACCCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp ATATTCATAAGTTCTTTAAGTAATTCCAGTGGTGGCTaGCCCAGGGATTTTAATACTTCAAGCATATGTGTA +
Preference number: 6 (lower is better)
Translates to: IFISSLSNSSGG*PRDFNTSSICV
Trigger: TACACATATGCTTGAAGTATTAAAATCCCTGGGTCAGCCACCACTGGAATTACTTAAAGAACTTATGAATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000449802.5
ENST00000483147.2
ENST00000681967.1
ENST00000682108.1
ENST00000682630.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1
CDS TCA 72 bp CATGCATTACATTCCTCTTCTGATGAAATGGATTTCTaGAACACTATAACCTGCAAGGAAAGTTACCTATTT +
Preference number: 6 (lower is better)
Translates to: HALHSSSDEMDF*NTITCKESYLF
Trigger: AAATAGGTAACTTTCCTTGCAGGTTATAGTGTTTCAGAAATCCATTTCATCAGAAGAGGAATGTAATGCATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682630.1
CDS TCA 72 bp ACATATCTGTATATTTATAAACTCCACAGAGAAGTCTaGTCTGTAATATCCATTAAGAACCACTGGCCTAGA +
Preference number: 6 (lower is better)
Translates to: TYLYIYKLHREV*SVISIKNHWPR
Trigger: TCTAGGCCAGTGGTTCTTAATGGATATTACAGATCAGACTTCTCTGTGGAGTTTATAAATATACAGATATGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS TCA 72 bp AAAATGTTGCCTAATTCAAGTTTGCAAAACGTTCACTaGAAGTCACCAGGAACTAATATTAGCAAACAGATG +
Preference number: 6 (lower is better)
Translates to: KMLPNSSLQNVH*KSPGTNISKQM
Trigger: CATCTGTTTGCTAATATTAGTTCCTGGTGACTTTCAGTGAACGTTTTGCAAACTTGAATTAGGCAACATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000683650.1
ENST00000683969.1
ENST00000684709.1
CDS CCA 72 bp TTAGTTTTATTTCATCTGATGGTCGAAGTAGTTCACTaGATATTCCTGGTTTACTTAGTGCTGAAAACACTT +
Preference number: 6 (lower is better)
Translates to: LVLFHLMVEVVH*IFLVYLVLKTL
Trigger: AAGTGTTTTCAGCACTAAGTAAACCAGGAATATCCAGTGAACTACTTCGACCATCAGATGAAATAAAACTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449802.5
ENST00000681967.1
ENST00000682108.1
ENST00000683001.1
ENST00000683338.1
ENST00000683969.1