RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAXE (Homo sapiens)

Ensembl gene IDs: ENSG00000163382

Ensembl transcript IDs: ENST00000368233.3, ENST00000368235.8, ENST00000467374.2, ENST00000488840.1, ENST00000679369.1, ENST00000679649.1, ENST00000679702.1, ENST00000679913.1, ENST00000680004.1, ENST00000680087.1, ENST00000680269.1, ENST00000680529.1, ENST00000680661.1, ENST00000681054.1, ENST00000681523.1, ENST00000681645.1, ENST00000681734.1, ENST00000681825.1, ENST00000681922.1

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCCCCTGCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTaGATGTTTAGGGGATCACCAGGTGTCCGTGGTGGAGGATGCTCA +
Preference number: 1 (lower is better)
Translates to: RAPAAFWALHLAQVL*MFRGSPGVRGGGCS
Trigger: TGAGCATCCTCCACCACGGACACCTGGTGATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAGGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR TCA 90 bp TTTACCCTAGTCCCAGAGGAGTGGGAAGTCCCCTCAGTTCCCACCTaGGGAACTCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGTGG +
Preference number: 1 (lower is better)
Translates to: FTLVPEEWEVPSVPT*GTLVQRAPRTLGPW
Trigger: CCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGGTGGGAACTGAGGGGACTTCCCACTCCTCTGGGACTAGGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CCA 90 bp TCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATaGGGCCAACATGTAAAGGGGACTTCTGAACACTGTTCCCCAGCC +
Preference number: 1 (lower is better)
Translates to: SRPTSSTYPWAVVSS*GQHVKGTSEHCSPA
Trigger: GGCTGGGGAACAGTGTTCAGAAGTCCCCTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CCA 90 bp AGTTCCCACCTGAGGAACTCTCGTCCAACGAGCTCCACGTACCCTTaGGCCGTGGTCTCTTCATGGGGCCAACATGTAAAGGGGACTTCT +
Preference number: 1 (lower is better)
Translates to: SSHLRNSRPTSSTYP*AVVSSWGQHVKGTS
Trigger: AGAAGTCCCCTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGGTGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CCA 90 bp TCGCTCACTGTCCTCTGCAGGCAAAGGCCTCGGCCGGAAGGAGAATaGTATCACTCAGGCTCTCAGGGTGACACTGAAGCAAGACACTCA +
Preference number: 1 (lower is better)
Translates to: SLTVLCRQRPRPEGE*YHSGSQGDTEARHS
Trigger: TGAGTGTCTTGCTTCAGTGTCACCCTGAGAGCCTGAGTGATACCATTCTCCTTCCGGCCGAGGCCTTTGCCTGCAGAGGACAGTGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR CCA 90 bp CCTCGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTATaGCAACCATACCGGCAAATTGGGCTCCGCAATGGTTTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: PRNLRKWARSRSQFL*QPYRQIGLRNGFSW
Trigger: CCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 90 bp GCCGTTCTTGGCATCCTGAGAGGGCCAGTTAGTACTGAAGTCCCTTaGCTGCTCAAGGATTGCAGGGATGAGGCAAGTGGAACAGCCTCG +
Preference number: 1 (lower is better)
Translates to: AVLGILRGPVSTEVP*LLKDCRDEASGTAS
Trigger: CGAGGCTGTTCCACTTGCCTCATCCCTGCAATCCTTGAGCAGCCAAGGGACTTCAGTACTAACTGGCCCTCTCAGGATGCCAAGAACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 90 bp ATTGCAGGGATGAGGCAAGTGGAACAGCCTCGGAACCTCCGAAAATaGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCATACCGGCAA +
Preference number: 1 (lower is better)
Translates to: IAGMRQVEQPRNLRK*ARSRSQFLWQPYRQ
Trigger: TTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCACTTGCCTCATCCCTGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR TCA 90 bp CAGCCGGCAAATTGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACGTCTCTATGGTTTCGACAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: QPANWAPQWFLLEKP*FWFPRTSLWFRQPS
Trigger: GGAAGGCTGTCGAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR GCA 90 bp CTGAGAGGGCCAGTTAGTACTGAAGTCCCTTGGCTGCTCAAGGATTaGAGGGATGAGGCAAGTGGAACAGCCTCGGAACCTCCGAAAATG +
Preference number: 1 (lower is better)
Translates to: LRGPVSTEVPWLLKD*RDEASGTASEPPKM
Trigger: CATTTTCGGAGGTTCCGAGGCTGTTCCACTTGCCTCATCCCTGCAATCCTTGAGCAGCCAAGGGACTTCAGTACTAACTGGCCCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 90 bp CCCTGGCAGGTAGGACATGACCCTGCCAAGGAGTTCACAAACCACTaGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTG +
Preference number: 1 (lower is better)
Translates to: PWQVGHDPAKEFTNH*WNELFNKTAANLVV
Trigger: CACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTGGTTTGTGAACTCCTTGGCAGGGTCATGTCCTACCTGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR CCA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTaGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTCCCA +
Preference number: 1 (lower is better)
Translates to: EPPRLTHPVSFSKSH*HVLHLIPLKVPSFP
Trigger: TGGGAAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR CCA 90 bp CCACTGCACTCCAGCCGGCAAATTGGGCTCCGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTATGGTTTC +
Preference number: 1 (lower is better)
Translates to: PLHSSRQIGLRNGFS*KNRDFGSRGRLYGF
Trigger: GAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGCTGGAGTGCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR TCA 90 bp TTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATaGGCTCTTGATAGATGGGCACATGAAACAGAGGGCCTGGGACCT +
Preference number: 1 (lower is better)
Translates to: FNKTAANLVVETGQV*ALDRWAHETEGLGP
Trigger: AGGTCCCAGGCCCTCTGTTTCATGTGCCCATCTATCAAGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR TCA 90 bp ATACCGGCAAATTGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACGTCTCTATGGTTTCGACAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: IPANWAPQWFLLEKP*FWFPRTSLWFRQPS
Trigger: GGAAGGCTGTCGAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 90 bp GGTTTGCTGAAGAGCCCACAGCTGGCTAGTAATGGCAAACAGGACTaGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGG +
Preference number: 1 (lower is better)
Translates to: GLLKSPQLASNGKQD*NPGLQASTFYCTNR
Trigger: CCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCAGCTGTGGGCTCTTCAGCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 90 bp TGGCAGGTAGGACATGACCCTGCCAAGGAGTTCACAAACCACTGGTaGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAA +
Preference number: 1 (lower is better)
Translates to: WQVGHDPAKEFTNHW*NELFNKTAANLVVE
Trigger: TTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTGGTTTGTGAACTCCTTGGCAGGGTCATGTCCTACCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR TCA 90 bp GGGCACATGAAACAGAGGGCCTGGGACCTGTGGCGTAGGCAGTCATaGTATGTCACCCATTCACTGGTACTGATAATTCTCTACAGGATG +
Preference number: 1 (lower is better)
Translates to: GHMKQRAWDLWRRQS*YVTHSLVLIILYRM
Trigger: CATCCTGTAGAGAATTATCAGTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCCTCTGTTTCATGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR CCA 90 bp GCTAAGCTCTTGTTCGAAGGGAGAATGAATAAGGCTGGGATTCCTTaGTGTTCTTACCATCACGGTCCTCCTTCCCAGCTCTACTCCCAC +
Preference number: 1 (lower is better)
Translates to: AKLLFEGRMNKAGIP*CSYHHGPPSQLYSH
Trigger: GTGGGAGTAGAGCTGGGAAGGAGGACCGTGATGGTAAGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR CCA 90 bp CTATGGCAACCATACCGGCAAATTGGGCTCCGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTATGGTTTC +
Preference number: 1 (lower is better)
Translates to: LWQPYRQIGLRNGFS*KNRDFGSRGRLYGF
Trigger: GAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTTGCCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR TCA 90 bp TGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAGCATTTCCTCTTCTTGTTCTGCTCA +
Preference number: 1 (lower is better)
Translates to: WSGASLLSVTGTCPL*RPDEPEHFLFLFCS
Trigger: TGAGCAGAACAAGAAGAGGAAATGCTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681734.1
3UTR GCA 90 bp TCCAGATTTATCGGACTGGCTTATATGGCTCTGCATGCCTGTTCCTaGCATCTCCAGCCTCATCTCTTCACTTTTCTCCAGGACCACTAC +
Preference number: 1 (lower is better)
Translates to: SRFIGLAYMALHACS*HLQPHLFTFLQDHY
Trigger: GTAGTGGTCCTGGAGAAAAGTGAAGAGATGAGGCTGGAGATGGCAGGAACAGGCATGCAGAGCCATATAAGCCAGTCCGATAAATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 90 bp CCCAACTCCTTGGCCCATAGTAGACTCTCAATTAATCTGATTAAATaGAGGTACTGTGAACAGGTACTATGGTCGGGGTGGAGCGGGGCA +
Preference number: 1 (lower is better)
Translates to: PNSLAHSRLSINLIK*RYCEQVLWSGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACAGTACCTTCATTTAATCAGATTAATTGAGAGTCTACTATGGGCCAAGGAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 90 bp CAGAACTTTCCTAACATAGTGGGATCCTGTGACCAGCCTTGCTGTTaGTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTC +
Preference number: 1 (lower is better)
Translates to: QNFPNIVGSCDQPCC*LLRLPRPSAGIEIF
Trigger: GAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGATCCCACTATGTTAGGAAAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 90 bp GCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTCCCTGGTTTCCCTaGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAAC +
Preference number: 1 (lower is better)
Translates to: AVGNRVHPFSLPWFP*GLNSCLVCLINSQN
Trigger: GTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAGAGAAAAAGGATGGACTCTGTTACCCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 90 bp AATTCTCAGAACTTTCCTAACATAGTGGGATCCTGTGACCAGCCTTaGTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAG +
Preference number: 1 (lower is better)
Translates to: NSQNFPNIVGSCDQP*CCLLRLPRPSAGIE
Trigger: CTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGATCCCACTATGTTAGGAAAGTTCTGAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 90 bp GTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTCCCTaGTTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAAT +
Preference number: 1 (lower is better)
Translates to: VLEAVGNRVHPFSLP*FPWGLNSCLVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 90 bp CTCTGTTTTTCCTGTGTTCAGCTAAGCTCTTGTTCGAAGGGAGAATaGATAAGGCTGGGATTCCTTGGTGTTCTTACCATCACGGTCCTC +
Preference number: 1 (lower is better)
Translates to: LCFSCVQLSSCSKGE*IRLGFLGVLTITVL
Trigger: GAGGACCGTGATGGTAAGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGCTGAACACAGGAAAAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR TCA 90 bp TGTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCCCATAGTAGACTCTCAATTAATCTG +
Preference number: 1 (lower is better)
Translates to: CRFHLGWAHLILIPL*IPNSLAHSRLSINL
Trigger: CAGATTAATTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 90 bp TTCAGGACCATTGTGATAGGTATAGGGACCATGACAATGGGATTTTaGAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGC +
Preference number: 1 (lower is better)
Translates to: FRTIVIGIGTMTMGF*SGGEREIGLNSQYS
Trigger: GCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCACAATGGTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680004.1
3UTR-3UTR CCA 90 bp TCCCCAGTGCTGAGGGCCCCTGCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCAAGGCTGGGATTCCTTaGTGTTCTTACCATCACGGT +
Preference number: 2 (lower is better)
Translates to: SPVLRAPAAFWALHLAQVKAGIP*CSYHHG
Trigger: ACCGTGATGGTAAGAACACCAAGGAATCCCAGCCTT...GACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR TCA 90 bp TCCCCAGTGCTGAGGGCCCCTGCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCTGTTCGAAGGGAGAATaGATAAGGCTGGGATTCCTT +
Preference number: 2 (lower is better)
Translates to: SPVLRAPAAFWALHLAQVCSKGE*IRLGFL
Trigger: AAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACA...GACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CCA 90 bp CAGGAAGGCTGTATCCCCAGTGCTGAGGGCCCCTGCAGCGTTCTGGGCGCTGCAATCACCAGGTGTCCGTaGTGGAGGATGCTCAAAGAT +
Preference number: 2 (lower is better)
Translates to: QEGCIPSAEGPCSVLGAAITRCP*WRMLKD
Trigger: ATCTTTGAGCATCCTCCACCACGGACACCTGGTGAT...TGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACTGGGGATACAGCCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CCA 90 bp AGTCCCAGAGGAGTGGGAAGTCCCCTCAGTTCCCACCTGAGGAACTCTCGTCCAAGCTCCACGTACCCTTaGGCCGTGGTCTCTTCATGG +
Preference number: 2 (lower is better)
Translates to: SPRGVGSPLSSHLRNSRPSSTYP*AVVSSW
Trigger: CCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCT...TGGACGAGAGTTCCTCAGGTGGGAACTGAGGGGACTTCCCACTCCTCTGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR-3UTR CCA 90 bp ATCAAGGGTGATCAGGTATCAAGAGAAGGGGGCTTAGGCTGGGCGCGGTGGCTCCTTGAGCCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: IKGDQVSREGGLGWARWLLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCCAACTCCTGGGCTCAAG...GAGCCACCGCGCCCAGCCTAAGCCCCCTTCTCTTGATACCTGATCACCCTTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
3UTR-3UTR CCA 90 bp CAGGAAGGCTGTATCCCCAGTGCTGAGGGCCCCTGCAGCGTTCTGGGCGCTGCAACCAGGTGTCCGTGGTaGAGGATGCTCAAAGATAAA +
Preference number: 2 (lower is better)
Translates to: QEGCIPSAEGPCSVLGAATRCPW*RMLKDK
Trigger: TTTATCTTTGAGCATCCTCCACCACGGACACCTGGT...TGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACTGGGGATACAGCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR CAA 90 bp CAGTTCCCACCTGAGGAACTCTCGTCCAACGAGCTCCACGTACCCTaGGGCCGTGGTCTCTTCATGGGGCCAACATGTAAAGGGGACTTC +
Preference number: 2 (lower is better)
Translates to: QFPPEELSSNELHVP*GRGLFMGPTCKGDF
Trigger: GAAGTCCCCTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGGTGGGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR-3UTR CCA 90 bp GATATCAAGGGTGATCAGGTATCAAGAGAAGGGGGCTTAGGCTGGGCGCGGTGGCTTGAGCCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: DIKGDQVSREGGLGWARWLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCCAACTCCTGGGCTCAAG...CCACCGCGCCCAGCCTAAGCCCCCTTCTCTTGATACCTGATCACCCTTGATATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
3UTR-3UTR CCA 90 bp GAGGTTACAGTGAGTGAGTCGATATCGCGCCACTGCCCTCAAGTCTGGGCAACACGGAACCTCCGAAAATaGGCACGCTCCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: EVTVSESISRHCPQVWATRNLRK*ARSRSQ
Trigger: CTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCG...TGTTGCCCAGACTTGAGGGCAGTGGCGCGATATCGACTCACTCACTGTAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR CCA 90 bp TGGCTCAGGTCCTGTGCATGTTTAGGGGATCACCAGGTGTCCGTGGTGGAGGATGAGCCCTCAAAGCTCTaGGGGCATCCTTCAGACTCA +
Preference number: 2 (lower is better)
Translates to: WLRSCACLGDHQVSVVEDEPSKL*GHPSDS
Trigger: TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTC...ATCCTCCACCACGGACACCTGGTGATCCCCTAAACATGCACAGGACCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CCA 90 bp TGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCGTACTATGGTCGGGGTaGAGCGGGGCATCTTTACTG +
Preference number: 2 (lower is better)
Translates to: CPDPQQELRSSGSVDPAIVLWSG*SGASLL
Trigger: CAGTAAAGATGCCCCGCTCCACCCCGACCATAGTAC...GATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp CTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: LPRPSAGIEIFRFRGSCHGTCPL*RPDEPE
Trigger: CTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCC...ATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GGGCCTGGGACCTGTGGCGTAGGCAGTCATGATATGTCACCCATTCACTGGTACAAGCCAGAGGAGACCTaGGAGATTATCTGGACCATC +
Preference number: 2 (lower is better)
Translates to: GPGTCGVGSHDMSPIHWYKPEET*EIIWTI
Trigger: GATGGTCCAGATAATCTCTCAGGTCTCCTCTGGCTT...GTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp GGGCCTGGGACCTGTGGCGTAGGCAGTCATGATATGTCACCCATTCACTGGTACGTTGCTTACTTAGACTaGCCAGACCCTCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GPGTCGVGSHDMSPIHWYVAYLD*PDPQQE
Trigger: TTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAAC...GTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATGAGCTCTTGTGAACAGGTACTATaGTCGGGGTGGAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: LQQDCGQLGSGNWAGMSSCEQVL*SGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACA...AGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTAGCAGCAATAGGGCGTaGGAGGTAGGGTACAGTCTC +
Preference number: 2 (lower is better)
Translates to: PDPQQELRSSGSVDPAICSSNRA*EVGYSL
Trigger: GAGACTGTACCCTACCTCCCACGCCCTATTGCTGCT...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTACGCGGAGCCGTTCTTaGCATCCTGAGAGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLTRSRS*HPERAS
Trigger: ACTGGCCCTCTCAGGATGCCAAGAACGGCTCCGCGT...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR TCA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAGGCAGGAGGAATGCTTaGGCCCAGGAGTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: VIGIGTMTMGFCSGGEREGRRNA*AQELEA
Trigger: GGCCTCCAACTCCTGGGCTCAAGCATTCCTCCTGCC...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR GCA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTGGCATGTCAGCTATCACCTACTCTaGCTCCACGAATTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: EPPRLTHPVSFSKSHWHVSYHLL*LHEFLR
Trigger: CCTGAGAAATTCGTGGAGGCAGAGTAGGTGATAGCT...GACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR CCA 90 bp CAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATGGTGTGCCACTCCTGTaGCCCCAGCTACTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: QWGRKRNWAQLSIQHGKYGVPLL*PQLLGR
Trigger: CCTCCCAAGTAGCTGGGGCCACAGGAGTGGCACACC...ATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR CCA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAGGTGTGCCACTCCTGTaGCCCCAGCTACTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VIGIGTMTMGFCSGGEREGVPLL*PQLLGR
Trigger: CCTCCCAAGTAGCTGGGGCCACAGGAGTGGCACACC...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR CAA 90 bp GGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCATACCGGCAAATaGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTTGGTT +
Preference number: 2 (lower is better)
Translates to: GHAPGPSFYGNHTGK*GSAMVSPGKTVILV
Trigger: AACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR TCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGGGCAGGAGGAATGCTTaGGCCCAGGAGTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKGRRNA*AQELEA
Trigger: GGCCTCCAACTCCTGGGCTCAAGCATTCCTCCTGCC...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
3UTR-3UTR TCA 90 bp ACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACGGCAGGAGGAATGCTTaGGCCCAGGAGTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: TMGFCSGGEREIGLNSQYGRRNA*AQELEA
Trigger: GGCCTCCAACTCCTGGGCTCAAGCATTCCTCCTGCC...GTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR TCA 90 bp ACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: TGTQDFRPPLSTVPIGGSGTCPL*RPDEPE
Trigger: CTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCC...GCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp TCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTCAAGGATTGCAGGGATaGGGCAAGTGGAACAGCCTC +
Preference number: 2 (lower is better)
Translates to: SQARLGVPLNQDLCLMRLQGLQG*GKWNSL
Trigger: GAGGCTGTTCCACTTGCCTCATCCCTGCAATCCTTG...AAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR TCA 90 bp TTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGGCTTCAGGGAGCCATaGTCACGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: FAVGEKEKLGSTLNTAWEGFREP*SRHCTP
Trigger: TGGAGTGCAGTGGCGTGATCATGGCTCCCTGAAGCC...TTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR TCA 90 bp GGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGCTTCAGGGAGCCATaGTCACGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: GFCSGGEREIGLNSQYSMGFREP*SRHCTP
Trigger: TGGAGTGCAGTGGCGTGATCATGGCTCCCTGAAGCC...CATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR GCA 90 bp CGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCAACATCAGAAAGCTGTGTTCTaGCCCTCTAGACTAAAATTA +
Preference number: 2 (lower is better)
Translates to: RPTSSTYPWAVVSSWGQHQKAVF*PSRLKL
Trigger: TAATTTTAGTCTAGAGGGGCAGAACACAGCTTTCTG...ATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR-3UTR GCA 90 bp GGGCCTGGGACCTGTGGCGTAGGCAGTCATGATATGTCACCCATTCACTGGTACTATCTGGACCATCCCTaGTTTGCAGATGTGGCTAAA +
Preference number: 2 (lower is better)
Translates to: GPGTCGVGSHDMSPIHWYYLDHP*FADVAK
Trigger: TTTAGCCACATCTGCAAAGCAGGGATGGTCCAGATA...GTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp CACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTGGCTTACGCTGGCTGCTCAAGGATTaGAGGGATGAGGCAAGTGGA +
Preference number: 2 (lower is better)
Translates to: HTMVSQKVFDEAGHGGLRWLLKD*RDEASG
Trigger: TCCACTTGCCTCATCCCTGCAATCCTTGAGCAGCCA...GCGTAAGCCACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR CCA 90 bp GCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTGTACTATGGTCGGGGTaGAGCGGGGCATCTTTACTG +
Preference number: 2 (lower is better)
Translates to: AVAYLDCPDPQQELRSSGVLWSG*SGASLL
Trigger: CAGTAAAGATGCCCCGCTCCACCCCGACCATAGTAC...ACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATGAATCCCCAACTCCTTaGCCCATAGTAGACTCTCAA +
Preference number: 2 (lower is better)
Translates to: LPRPSAGIEIFRFRGSCHESPTP*PIVDSQ
Trigger: TTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTC...ATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTGTTGCTCCCTCTGCTTaGGACATTCTTCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: PDPQQELRSSGSVDPAICVAPSA*DILLPF
Trigger: GAAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAAC...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CAA 90 bp GACCATCCCTGCTTTGCAGATGTGGCTAAAAGGGTGAAAAGTGGTTaGCTGAAGAGCCCACAGCTGGCTAGTAATGGCAAACAGGACTGG +
Preference number: 2 (lower is better)
Translates to: DHPCFADVAKRVKSG*LKSPQLASNGKQDW
Trigger: CCAGTCCTGTTTGCCATTACTAGCCAGCTGTGGGCTCTTCAGCAAACCACTTTTCACCCTTTTAGCCACATCTGCAAAGCAGGGATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRILIPL*IPNSLA
Trigger: GGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAAT...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATAGGGCGTTCCCCCTTTACCTTCTaGGTTTCTCTTATCCTCCAG +
Preference number: 2 (lower is better)
Translates to: DLQVPWILPSVKGAAIGRSPFTF*VSLILQ
Trigger: CTGGAGGATAAGAGAAACTCAGAAGGTAAAGGGGGA...ACGCCCTATTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGTCCCCCTTTACCTTCTaGGTTTCTCTTATCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRSPFTF*VSLILQ
Trigger: CTGGAGGATAAGAGAAACTCAGAAGGTAAAGGGGGA...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp TCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGATGGATGGTGAAGGACTTGAGCCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SCQRQAEVIRYHLMDGEGLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCCAACTCCTGGGCTCAAG...TCCTTCACCATCCATCAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
3UTR-3UTR CCA 90 bp AGTCTCACTCCCCACCCCAACCTTTGTGGAGGATGGACTTCTCCACAAAGCATCGAATCCCCAACTCCTTaGCCCATAGTAGACTCTCAA +
Preference number: 2 (lower is better)
Translates to: SLTPHPNLCGGWTSPQSIESPTP*PIVDSQ
Trigger: TTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTC...GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGAGTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAACTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACG +
Preference number: 2 (lower is better)
Translates to: VIGIGTMTMGFCSGGERELLEKP*FWFPRT
Trigger: CGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAG...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR-3UTR CCA 90 bp TTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAACTTTTGTGAACAGGTACTATaGTCGGGGTGGAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: FPWGLNSCLVCLINSQNFCEQVL*SGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACA...AAAGTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTAGATTCCATCTGGGCTaGGCCCATCTCATTCTTATT +
Preference number: 2 (lower is better)
Translates to: PDPQQELRSSGSVDPAICRFHLG*AHLILI
Trigger: AATAAGAATGAGATGGGCCCAGCCCAGATGGAATCT...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCGATCTTCAGGTTCCGTaGATCCTGCCATCTGTTAAG +
Preference number: 2 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEIDLQVP*ILPSVK
Trigger: CTTAACAGATGGCAGGATCCACGGAACCTGAAGATC...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCTTCCCTGGTTTCCCTaGGGCCTGAACAGTTGCCTT +
Preference number: 2 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYLPWFP*GLNSCL
Trigger: AAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAG...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp TTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAACTCCAGCCGGCAAATTaGGCTCCGCAATGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: FAVGEKEKLGSTLNTAWELQPAN*APQWFL
Trigger: GAGAAACCATTGCGGAGCCCAATTTGCCGGCTGGAG...TTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR-3UTR TCA 90 bp GTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTAATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: VMANRTGTQDFRPPLSTVILIPL*IPNSLA
Trigger: GGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAAT...TACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp TGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTCTGTTTCTTTTCTTTaGAGGTACGACAGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: CPDPQQELRSSGSVDPAISVSFL*RYDSLP
Trigger: TGGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGA...GATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCATAGTGGGATCCTGTaGCCAGCCTTGCTGTTGCTT +
Preference number: 2 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYHSGIL*PALLLL
Trigger: AAGCAACAGCAAGGCTGGTCACAGGATCCCACTATG...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTTTTATCCCGTTCTTGGCATCCTaGGAGGGCCAGTTAGTACTG +
Preference number: 2 (lower is better)
Translates to: ARLGVPLNQDLCLMRLFIPFLAS*EGQLVL
Trigger: CAGTACTAACTGGCCCTCTCAGGATGCCAAGAACGG...GATAAAAAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR TCA 90 bp GAGGTTACAGTGAGTGAGTCGATATCGCGCCACTGCCCTCAAGTCTGGGCAACATGTTCCTGTGAAGGCTaGGTATTCATGAGTATTCAA +
Preference number: 2 (lower is better)
Translates to: EVTVSESISRHCPQVWATCSCEG*VFMSIQ
Trigger: TTGAATACTCATGAATACTCAGCCTTCACAGGAACA...TGTTGCCCAGACTTGAGGGCAGTGGCGCGATATCGACTCACTCACTGTAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR TCA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAGGTGAGAGGATTGCTTaGGTCCAGGAGATTGAGGCT +
Preference number: 2 (lower is better)
Translates to: VIGIGTMTMGFCSGGEREGERIA*VQEIEA
Trigger: AGCCTCAATCTCCTGGACTCAAGCAATCCTCTCACC...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR GCA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTTCCTGTGACCAGCCTTaGTGTTGCTTACTTAGACTG +
Preference number: 2 (lower is better)
Translates to: HWWNELFNKTAANLVVETSCDQP*CCLLRL
Trigger: CAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGA...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp TGGTATCACTCAGGCTCTCAGGGTGACACTGAAGCAAGACACTCATGGGGTAAGTGGGGCCTGAACAGTTaGCTTGTATGCCTTATCAAT +
Preference number: 2 (lower is better)
Translates to: WYHSGSQGDTEARHSWGKWGLNS*LVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCA...CTTACCCCATGAGTGTCTTGCTTCAGTGTCACCCTGAGAGCCTGAGTGATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR-3UTR GCA 90 bp CTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATGAGCTCTTGGGGCCTGAACAGTTaGCTTGTATGCCTTATCAAT +
Preference number: 2 (lower is better)
Translates to: LQQDCGQLGSGNWAGMSSWGLNS*LVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCA...AGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp GATAAAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCACAGCTCTACTCCCACTaGTGTTGGTGTTTTCTATAC +
Preference number: 2 (lower is better)
Translates to: DKDATAEPSKLWGHPSDSQLYSH*CWCFLY
Trigger: GTATAGAAAACACCAACACCAGTGGGAGTAGAGCTG...TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTTTTACTGTCAGTCACTaGCACTTGTCCACTGTGAAG +
Preference number: 2 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSFTVSH*HLSTVK
Trigger: CTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAA...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCGTTGCTCCCTCTGCTTaGGACATTCTTCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIVAPSA*DILLPF
Trigger: GAAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAAC...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCTTAAGGCCAGGGATTaGAGACCAGCCTGTACAACA +
Preference number: 2 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMLKARD*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCCAATCCCTGGCCTTAAG...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR CAA 90 bp GACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTaGGGACATTCTTCTCCCTTTCCCCCTTTACCTTCTGAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: DSLPSSGYCTCCSLC*GHSSPFPPLPSEFL
Trigger: GAGAAACTCAGAAGGTAAAGGGGGAAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATTCACCTGATGGATGGTaGAGGATGAGGAACCTGATC +
Preference number: 2 (lower is better)
Translates to: GILQWGRKRNWAQLSIQHSPDGW*RMRNLI
Trigger: GATCAGGTTCCTCATCCTTCACCATCCATCAGGTGA...ATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR TCA 90 bp TCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGATGGATGGTGAAGGATCACCTGATGGATGGTaGAGGATGAGGAACCTGATC +
Preference number: 2 (lower is better)
Translates to: SCQRQAEVIRYHLMDGEGSPDGW*RMRNLI
Trigger: GATCAGGTTCCTCATCCTTCACCATCCATCAGGTGA...TCCTTCACCATCCATCAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
3UTR-3UTR TCA 90 bp AGTCTCACTCCCCACCCCAACCTTTGTGGAGGATGGACTTCTCCACAAAGCATCTTGTTTGACCTAGGATaGCACAATCCAGATTTATCG +
Preference number: 2 (lower is better)
Translates to: SLTPHPNLCGGWTSPQSILFDLG*HNPDLS
Trigger: CGATAAATCTGGATTGTGTCATCCTAGGTCAAACAA...GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGAGTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGGGTGAGAGGATTGCTTaGGTCCAGGAGATTGAGGCT +
Preference number: 2 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKGERIA*VQEIEA
Trigger: AGCCTCAATCTCCTGGACTCAAGCAATCCTCTCACC...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR GCA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCTTATATGGCTCTGCATaGCTGTTCCTGCCATCTCCA +
Preference number: 2 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIILYGSA*LFLPSP
Trigger: TGGAGATGGCAGGAACAGGCATGCAGAGCCATATAA...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGAGCTATCACCTACTCTaGCTCCACGAATTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMSYHLL*LHEFLR
Trigger: CCTGAGAAATTCGTGGAGGCAGAGTAGGTGATAGCT...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR CCA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTTTTACTGTCAGTCACTaGCACTTGTCCACTGTGAAG +
Preference number: 2 (lower is better)
Translates to: HWWNELFNKTAANLVVETFTVSH*HLSTVK
Trigger: CTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAA...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp GGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAAAGATTCCATCTGGGCTaGGCCCATCTCATTCTTATT +
Preference number: 2 (lower is better)
Translates to: GIEIFRFRGSCHLLREQQRFHLG*AHLILI
Trigger: AATAAGAATGAGATGGGCCCAGCCCAGATGGAATCT...TTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CAAAGGGACAAGTTCTGGCACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCACCATACCGGCAAATTaGGCTCCGCAATGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: QRDKFWHTMVSQKVFDEATIPAN*APQWFL
Trigger: GAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGT...GGCCTCATCAAACACTTTTTGACTCACCATTGTGTGCCAGAACTTGTCCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR CCA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTAGGTCCCAGTTTCTATaGCAACCATACCGGCAAATT +
Preference number: 2 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLRSQFL*QPYRQI
Trigger: AATTTGCCGGTATGGTTGCCATAGAAACTGGGACCT...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR-3UTR CCA 90 bp TTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAAAAATTAGCCAGGTATaGTGTGCCACTCCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: FAVGEKEKLGSTLNTAWEKISQV*CATPVA
Trigger: GGCCACAGGAGTGGCACACCATACCTGGCTAATTTT...TTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR CAA 90 bp ACTCAGCGCTTCAGACCTCTGTTTTTCCTGTGTTCAGCTAAGCTCTaGTTCGAAGGGAGAATGAATAAGGCTGGGATTCCTTGGTGTTCT +
Preference number: 2 (lower is better)
Translates to: TQRFRPLFFLCSAKL*FEGRMNKAGIPWCS
Trigger: AGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGCTGAACACAGGAAAAACAGAGGTCTGAAGCGCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR TCA 90 bp ACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCTTGTTTGACCTAGGATaGCACAATCCAGATTTATCG +
Preference number: 2 (lower is better)
Translates to: TGTQDFRPPLSTVPIGGSLFDLG*HNPDLS
Trigger: CGATAAATCTGGATTGTGTCATCCTAGGTCAAACAA...GCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp CCACTGGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTCCCAGGCTAAAGGCTGAGTATTCATaGGTATTCAACCCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: PLACPPSNPTQGPKFPRLKAEYS*VFNPEK
Trigger: TTTTTCAGGGTTGAATACTCATGAATACTCAGCCTT...TAGCCTGGGAAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR CCA 90 bp GCTAAGCTCTTGTTCGAAGGGAGAATGAATAAGGCTGGGATTCCTTGGTGTTCTTACTCCCACTGGTGTTaGTGTTTTCTATACTGCCCC +
Preference number: 2 (lower is better)
Translates to: AKLLFEGRMNKAGIPWCSYSHWC*CFLYCP
Trigger: GGGGCAGTATAGAAAACACCAACACCAGTGGGAGTA...AGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CCA 90 bp TTCCTCTATCACAGGCAACACTTCCATCATAATTGCCTATGTAGATTCCATCTGGTACTATGGTCGGGGTaGAGCGGGGCATCTTTACTG +
Preference number: 2 (lower is better)
Translates to: FLYHRQHFHHNCLCRFHLVLWSG*SGASLL
Trigger: CAGTAAAGATGCCCCGCTCCACCCCGACCATAGTAC...CAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CCAATCTGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGTGTGAACAGGTACTATaGTCGGGGTGGAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: PICFFSLKVRQSSIFRLLCEQVL*SGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACA...CAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATGAATCCCCAACTCCTTaGCCCATAGTAGACTCTCAA +
Preference number: 2 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYESPTP*PIVDSQ
Trigger: TTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTC...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp GGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGAATTGGGCTCCGCAATaGTTTCTCCTGGAAAAACCG +
Preference number: 2 (lower is better)
Translates to: GFCSGGEREIGLNSQYSMNWAPQ*FLLEKP
Trigger: CGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATT...CATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR CAA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTaGCTGTATCAGAAGTTTGTGAAGGTATTAGAGGCTGTGGGTAAC +
Preference number: 2 (lower is better)
Translates to: SLSKETTRYNHPKPN*LYQKFVKVLEAVGN
Trigger: GTTACCCACAGCCTCTAATACCTTCACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp TTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: FSLKVRQSSIFRLLHMLLGTCPL*RPDEPE
Trigger: CTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCC...GAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR TCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTTGTTCCTGTGAAGGCTaGGTATTCATGAGTATTCAA +
Preference number: 2 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRCSCEG*VFMSIQ
Trigger: TTGAATACTCATGAATACTCAGCCTTCACAGGAACA...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR GCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTCACTTCCATCATAATTaGCTATGTAGATTCCATCTG +
Preference number: 2 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSHFHHN*LCRFHL
Trigger: CAGATGGAATCTACATAGGCAATTATGATGGAAGTG...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCGCCATCATCATCTCTTaGCTAATTTCTTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIAIIIS*LISFSS
Trigger: GCTGGAGAAAGAAATTAGGCAAGAGATGATGATGGC...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGTATCTGGACCATCCCTaGTTTGCAGATGTGGCTAAA +
Preference number: 2 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVYLDHP*FADVAK
Trigger: TTTAGCCACATCTGCAAAGCAGGGATGGTCCAGATA...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp CTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATGAGCTCTAACAGTTGCCTTGTATaGCTTATCAATTCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: LQQDCGQLGSGNWAGMSSNSCLV*LINSQN
Trigger: GTTCTGAGAATTGATAAGGCATACAAGGCAACTGTT...AGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGTTTACTGTCAGTCACTaGCACTTGTCCACTGTGAAG +
Preference number: 2 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVFTVSH*HLSTVK
Trigger: CTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAA...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp CAAAGGGACAAGTTCTGGCACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCCTCTCAATGCTTCCCTaGAGTTTTCCTTCCTCGTAT +
Preference number: 2 (lower is better)
Translates to: QRDKFWHTMVSQKVFDEALSMLP*SFPSSY
Trigger: ATACGAGGAAGGAAAACTCCAGGGAAGCATTGAGAG...GGCCTCATCAAACACTTTTTGACTCACCATTGTGTGCCAGAACTTGTCCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR CAA 90 bp ATTCAGGACCATTGTGATAGGTATAGGGACCATGACAATGGGATTTaGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAG +
Preference number: 2 (lower is better)
Translates to: IQDHCDRYRDHDNGI*QWGRKRNWAQLSIQ
Trigger: CTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCACAATGGTCCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680004.1
3UTR-3UTR TCA 90 bp CCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCATTGTTTGACCTAGGATaGCACAATCCAGATTTATCG +
Preference number: 2 (lower is better)
Translates to: PISLHLCYHLLPHFGPSSLFDLG*HNPDLS
Trigger: CGATAAATCTGGATTGTGTCATCCTAGGTCAAACAA...TGATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGCACTTCCATCATAATTaGCTATGTAGATTCCATCTG +
Preference number: 2 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWHFHHN*LCRFHL
Trigger: CAGATGGAATCTACATAGGCAATTATGATGGAAGTG...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTGACCAGCCTTGCTGTTaGTTACTTAGACTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLDQPCC*LLRLPR
Trigger: TCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTC...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp GGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGATGACAATGGGATTTTaGAGTGGGGGAGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: GFCSGGEREIGLNSQYSMMTMGF*SGGERE
Trigger: TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT...CATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR CCA 90 bp GCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTTTTATCCTCTCAATGCTTCCCTaGAGTTTTCCTTCCTCGTAT +
Preference number: 2 (lower is better)
Translates to: ARLGVPLNQDLCLMRLFILSMLP*SFPSSY
Trigger: ATACGAGGAAGGAAAACTCCAGGGAAGCATTGAGAG...GATAAAAAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR CCA 90 bp GGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGGAGAAAGAGAAATTaGGCTCAACTCTCAATACAG +
Preference number: 2 (lower is better)
Translates to: GFCSGGEREIGLNSQYSMGRKRN*AQLSIQ
Trigger: CTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCC...CATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR CCA 90 bp TTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAAATGGGATTTTGCAGTaGGGGAGAAAGAGAAATTGG +
Preference number: 2 (lower is better)
Translates to: FAVGEKEKLGSTLNTAWENGILQ*GRKRNW
Trigger: CCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATT...TTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR TCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLILIPL*IPNSLA
Trigger: GGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAAT...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTCCATCTTCAGGTTATTaGACATGTTGCTCCCTCTGC +
Preference number: 2 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLPSSGY*TCCSLC
Trigger: GCAGAGGGAGCAACATGTGCAATAACCTGAAGATGG...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGAACAGTTGCCTTGTATaGCTTATCAATTCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVNSCLV*LINSQN
Trigger: GTTCTGAGAATTGATAAGGCATACAAGGCAACTGTT...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTGCCATCATCATCTCTTaGCTAATTTCTTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLAIIIS*LISFSS
Trigger: GCTGGAGAAAGAAATTAGGCAAGAGATGATGATGGC...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCAACCTTTGTGGAGGATaGACTTCTCCACAAAGCATC +
Preference number: 2 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFNLCGG*TSPQSI
Trigger: GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTT...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR GCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCGCCATCATCATCTCTTaGCTAATTTCTTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFAIIIS*LISFSS
Trigger: GCTGGAGAAAGAAATTAGGCAAGAGATGATGATGGC...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CCA 90 bp GAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATAACTGAGGAATTTATACGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGT +
Preference number: 2 (lower is better)
Translates to: EIGLNSQYSMGSITEEFIRNGFS*KNRDFG
Trigger: ACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCG...TATAAATTCCTCAGTTATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR-3UTR GCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCCACTTCCATCATAATTaGCTATGTAGATTCCATCTG +
Preference number: 2 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFHFHHN*LCRFHL
Trigger: CAGATGGAATCTACATAGGCAATTATGATGGAAGTG...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp GGGCAGGAAGGCTGTATCCCCAGTGCTGAGGGCCCCTaGAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCCT +
Preference number: 3 (lower is better)
Translates to: GQEGCIPSAEGP*SVLGAAPGSGP
Trigger: AGGACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACTGGGGATACAGCCTTCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR GCA 72 bp GCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTaGATGTTTAGGGGATCACCAGGTGTCCGTGGTGGA +
Preference number: 3 (lower is better)
Translates to: AAFWALHLAQVL*MFRGSPGVRGG
Trigger: TCCACCACGGACACCTGGTGATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR TCA 72 bp GTCCCAGAGGAGTGGGAAGTCCCCTCAGTTCCCACCTaGGGAACTCTCGTCCAACGAGCTCCACGTACCCTT +
Preference number: 3 (lower is better)
Translates to: VPEEWEVPSVPT*GTLVQRAPRTL
Trigger: AAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGGTGGGAACTGAGGGGACTTCCCACTCCTCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CCA 72 bp CCAATGTCAGGTGTGTGGAATGGCAAGAGGCCTGTGTaGGGGGTGCCTTGTGAGGTCTCACAGCAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PMSGVWNGKRPV*GVPCEVSQQAG
Trigger: TCCTGCCTGCTGTGAGACCTCACAAGGCACCCCCCACACAGGCCTCTTGCCATTCCACACACCTGACATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR-3UTR CAA 90 bp AGGCAAGTGGAACAGCCTCGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGAACCATACCGGCAAATaGGGCTCCGCAATGGTTTCT +
Preference number: 3 (lower is better)
Translates to: RQVEQPRNLRKWARSRSQNHTGK*GSAMVS
Trigger: AGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTT...CTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCACTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 72 bp CTGAGGAACTCTCGTCCAACGAGCTCCACGTACCCTTaGGCCGTGGTCTCTTCATGGGGCCAACATGTAAAG +
Preference number: 3 (lower is better)
Translates to: LRNSRPTSSTYP*AVVSSWGQHVK
Trigger: CTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CCA 72 bp ACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATaGGGCCAACATGTAAAGGGGACTTCTGAACACTGT +
Preference number: 3 (lower is better)
Translates to: TSSTYPWAVVSS*GQHVKGTSEHC
Trigger: ACAGTGTTCAGAAGTCCCCTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CCA 72 bp CTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTATaGCAACCATACCGGCAAATTGGGCTCCGCAATGGT +
Preference number: 3 (lower is better)
Translates to: LRKWARSRSQFL*QPYRQIGLRNG
Trigger: ACCATTGCGGAGCCCAATTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 72 bp ATGAGGCAAGTGGAACAGCCTCGGAACCTCCGAAAATaGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCA +
Preference number: 3 (lower is better)
Translates to: MRQVEQPRNLRK*ARSRSQFLWQP
Trigger: TGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCACTTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 72 bp TCCAGCCGGCAAATTGGGCTCCGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTC +
Preference number: 3 (lower is better)
Translates to: SSRQIGLRNGFS*KNRDFGSRGRL
Trigger: GAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR-3UTR CAA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGTCCCCACCCCAACCTTaGTGGAGGATGGACTTCTCC +
Preference number: 3 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRSPPQP*WRMDFS
Trigger: GGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGA...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 72 bp CACCCCAGAGGTCAAGAGTCGTGGGATGAAGTTTGCTaGGGAGCAGCTGCTAAAGCATGGATGGACTCAAGG +
Preference number: 3 (lower is better)
Translates to: HPRGQESWDEVC*GAAAKAWMDSR
Trigger: CCTTGAGTCCATCCATGCTTTAGCAGCTGCTCCTCAGCAAACTTCATCCCACGACTCTTGACCTCTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR GCA 72 bp CCAGTTAGTACTGAAGTCCCTTGGCTGCTCAAGGATTaGAGGGATGAGGCAAGTGGAACAGCCTCGGAACCT +
Preference number: 3 (lower is better)
Translates to: PVSTEVPWLLKD*RDEASGTASEP
Trigger: AGGTTCCGAGGCTGTTCCACTTGCCTCATCCCTGCAATCCTTGAGCAGCCAAGGGACTTCAGTACTAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 72 bp CCATACCGGCAAATTGGGCTCCGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTC +
Preference number: 3 (lower is better)
Translates to: PYRQIGLRNGFS*KNRDFGSRGRL
Trigger: GAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CCA 72 bp GAAGCCGAGGTGTGCATATCACTTAAGGCCAGGGATTaGAGACCAGCCTGTACAACATGGCAAGACCCCTTC +
Preference number: 3 (lower is better)
Translates to: EAEVCISLKARD*RPACTTWQDPF
Trigger: GAAGGGGTCTTGCCATGTTGTACAGGCTGGTCTCCAATCCCTGGCCTTAAGTGATATGCACACCTCGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR CAA 90 bp CGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTGCATGTTTAGGGGATCACCAGTGTTCAGCTAAGCTCTaGTTCGAAGGGAGAATGAAT +
Preference number: 3 (lower is better)
Translates to: RSGRCTWLRSCACLGDHQCSAKL*FEGRMN
Trigger: ATTCATTCTCCCTTCGAACAAGAGCTTAGCTGAACA...CTGGTGATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CAA 90 bp TCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCATACCGGCAAAGGAAAAACCGTGATTTaGGTTCCCGCGGACGTCTCT +
Preference number: 3 (lower is better)
Translates to: SENGHAPGPSFYGNHTGKGKTVI*VPADVS
Trigger: AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCC...TTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR TCA 72 bp ACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATaGGCTCTTGATAGATGGGCACATGAAACAGAGGGC +
Preference number: 3 (lower is better)
Translates to: TAANLVVETGQV*ALDRWAHETEG
Trigger: GCCCTCTGTTTCATGTGCCCATCTATCAAGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR CCA 72 bp AAGAGCCCACAGCTGGCTAGTAATGGCAAACAGGACTaGAACCCAGGACTTCAGGCCTCCACTTTCTACTGT +
Preference number: 3 (lower is better)
Translates to: KSPQLASNGKQD*NPGLQASTFYC
Trigger: ACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCAGCTGTGGGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 72 bp GCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTCCCTaGTTTCCCTGGGGCCTGAACAGTTGCCTTGTATGC +
Preference number: 3 (lower is better)
Translates to: AVGNRVHPFSLP*FPWGLNSCLVC
Trigger: GCATACAAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAGAGAAAAAGGATGGACTCTGTTACCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 72 bp GGACATGACCCTGCCAAGGAGTTCACAAACCACTGGTaGAATGAGCTCTTCAACAAGACTGCGGCCAACTTG +
Preference number: 3 (lower is better)
Translates to: GHDPAKEFTNHW*NELFNKTAANL
Trigger: CAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTGGTTTGTGAACTCCTTGGCAGGGTCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR CCA 72 bp ATGAAGTTTGCTGAGGAGCAGCTGCTAAAGCATGGATaGACTCAAGGTGATCCCCATGGGGCCTCTTCCACA +
Preference number: 3 (lower is better)
Translates to: MKFAEEQLLKHG*TQGDPHGASST
Trigger: TGTGGAAGAGGCCCCATGGGGATCACCTTGAGTCCATCCATGCTTTAGCAGCTGCTCCTCAGCAAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR-3UTR CAA 90 bp GCTCTCAGGGTGACACTGAAGCAAGACACTCATGGGGTAAGACTGGGTGGACTGGGCAGGTATGAGCTCTaGATAGATGGGCACATGAAA +
Preference number: 3 (lower is better)
Translates to: ALRVTLKQDTHGVRLGGLGRYEL*IDGHMK
Trigger: TTTCATGTGCCCATCTATCAAGAGCTCATACCTGCC...CAGTCCACCCAGTCTTACCCCATGAGTGTCTTGCTTCAGTGTCACCCTGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR TCA 72 bp CTAGAGAGATGGCACCCAATCCCCAGGGTTGGTCTCTaGCTTCCACCATTCACTGACTTTTATTGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: LERWHPIPRVGL*LPPFTDFYCQR
Trigger: CCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGGGGATTGGGTGCCATCTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
3UTR TCA 72 bp CATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCCCATAGTAGACTCTCA +
Preference number: 3 (lower is better)
Translates to: HLGWAHLILIPL*IPNSLAHSRLS
Trigger: TGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 72 bp CCCAGTACCAAAGGGACAAGTTCTGGCACACAATGGTaGGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTG +
Preference number: 3 (lower is better)
Translates to: PSTKGTSSGTQW*VKKCLMRPVTV
Trigger: CACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTGCCAGAACTTGTCCCTTTGGTACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR GCA 72 bp CCTAACATAGTGGGATCCTGTGACCAGCCTTGCTGTTaGTTACTTAGACTGCCCAGACCCTCAGCAGGAATT +
Preference number: 3 (lower is better)
Translates to: PNIVGSCDQPCC*LLRLPRPSAGI
Trigger: AATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGATCCCACTATGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp TTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAACTTTTCCCCACCCCAACCTTaGTGGAGGATGGACTTCTCC +
Preference number: 3 (lower is better)
Translates to: FPWGLNSCLVCLINSQNFSPPQP*WRMDFS
Trigger: GGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGA...AAAGTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTCTGGGGCCTGAACAGTaGCCTTGTATGCCTTATCAA +
Preference number: 3 (lower is better)
Translates to: HWWNELFNKTAANLVVETLGPEQ*PCMPYQ
Trigger: TTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAG...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp GGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGACTCCAGCCGGCAAATaGGGCTCCGCAATGGTTTCT +
Preference number: 3 (lower is better)
Translates to: GFCSGGEREIGLNSQYSMTPAGK*GSAMVS
Trigger: AGAAACCATTGCGGAGCCCAATTTGCCGGCTGGAGT...CATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR TCA 72 bp AAACAGAGGGCCTGGGACCTGTGGCGTAGGCAGTCATaGTATGTCACCCATTCACTGGTACTGATAATTCTC +
Preference number: 3 (lower is better)
Translates to: KQRAWDLWRRQS*YVTHSLVLIIL
Trigger: GAGAATTATCAGTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCCTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
3UTR TCA 72 bp TCAGAGCTCATATTTATTCCCCTGGCAGGTAGGACATaGCCCTGCCAAGGAGTTCACAAACCACTGGTGGAA +
Preference number: 3 (lower is better)
Translates to: SELIFIPLAGRT*PCQGVHKPLVE
Trigger: TTCCACCAGTGGTTTGTGAACTCCTTGGCAGGGTCATGTCCTACCTGCCAGGGGAATAAATATGAGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
3UTR TCA 72 bp AATTGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACGTCTCTATGGTTTCGA +
Preference number: 3 (lower is better)
Translates to: NWAPQWFLLEKP*FWFPRTSLWFR
Trigger: TCGAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000681523.1
3UTR GCA 72 bp CCCTTCCTCTATCACAGGCAACACTTCCATCATAATTaGCTATGTAGATTCCATCTGGGCTGGGCCCATCTC +
Preference number: 3 (lower is better)
Translates to: PFLYHRQHFHHN*LCRFHLGWAHL
Trigger: GAGATGGGCCCAGCCCAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp ATCCAGATTTATCGGACTGGCTTATATGGCTCTGCATaGCTGTTCCTGCCATCTCCAGCCTCATCTCTTCAC +
Preference number: 3 (lower is better)
Translates to: IQIYRTGLYGSA*LFLPSPASSLH
Trigger: GTGAAGAGATGAGGCTGGAGATGGCAGGAACAGGCATGCAGAGCCATATAAGCCAGTCCGATAAATCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp CACAATCCAGATTTATCGGACTGGCTTATATGGCTCTaGATGCCTGTTCCTGCCATCTCCAGCCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: HNPDLSDWLIWL*MPVPAISSLIS
Trigger: AGAGATGAGGCTGGAGATGGCAGGAACAGGCATGCAGAGCCATATAAGCCAGTCCGATAAATCTGGATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp GCCAGAGGAGACCTGAGAGATTATCTGGACCATCCCTaGTTTGCAGATGTGGCTAAAAGGGTGAAAAGTGGT +
Preference number: 3 (lower is better)
Translates to: ARGDLRDYLDHP*FADVAKRVKSG
Trigger: ACCACTTTTCACCCTTTTAGCCACATCTGCAAAGCAGGGATGGTCCAGATAATCTCTCAGGTCTCCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp AACTTTCCTAACATAGTGGGATCCTGTGACCAGCCTTaGTGTTGCTTACTTAGACTGCCCAGACCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: NFPNIVGSCDQP*CCLLRLPRPSA
Trigger: TGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGATCCCACTATGTTAGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp TACTCTGCCTCCACGAATTTCTCAGGCTACTCTCAATaGTTCCCTGGAGTTTTCCTTCCTCGTATTTGCGCC +
Preference number: 3 (lower is better)
Translates to: YSASTNFSGYSQ*FPGVFLPRICA
Trigger: GGCGCAAATACGAGGAAGGAAAACTCCAGGGAAGCATTGAGAGTAGCCTGAGAAATTCGTGGAGGCAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR CCA 72 bp TTGTTCGAAGGGAGAATGAATAAGGCTGGGATTCCTTaGTGTTCTTACCATCACGGTCCTCCTTCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: LFEGRMNKAGIP*CSYHHGPPSQL
Trigger: GAGCTGGGAAGGAGGACCGTGATGGTAAGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CAA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGTGTAATCCCAACACTTaGGGAAGCCGAGGTGTGCAT +
Preference number: 3 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMCNPNT*GSRGVH
Trigger: ATGCACACCTCGGCTTCCCAAAGTGTTGGGATTACA...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR GCA 72 bp TACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTaGTCCCTCTGCTTGGGACATTCTTCTCCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: YDSLPSSGYCTC*SLCLGHSSPFP
Trigger: GGGAAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp GCTAAGCTCTTGTTCGAAGGGAGAATGAATAAGGCTGGGATTCCTTGGTGTTCTCTACTCCCACTGGTGTaGGTGTTTTCTATACTGCCC +
Preference number: 3 (lower is better)
Translates to: AKLLFEGRMNKAGIPWCSLLPLV*VFSILP
Trigger: GGGCAGTATAGAAAACACCAACACCAGTGGGAGTAG...AGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CAA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCTCCATCTTCAGGTTATaGCACATGTTGCTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIISIFRL*HMLLPL
Trigger: CAGAGGGAGCAACATGTGCAATAACCTGAAGATGGA...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGGGAAAAACCGTGATTTaGGTTCCCGCGGACGTCTCT +
Preference number: 3 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKGKTVI*VPADVS
Trigger: AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCC...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681523.1
3UTR-3UTR CAA 90 bp CTCCAAGTCCCACTGGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTTGCTTGATGAACCTATaGAGATGTCTAGTCTCTAGG +
Preference number: 3 (lower is better)
Translates to: LQVPLACPPSNPTQGPKFCLMNL*RCLVSR
Trigger: CCTAGAGACTAGACATCTCAATAGGTTCATCAAGCA...AAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGGGACTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
3UTR-3UTR CAA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGATCTGTTTCTTTTCTTaGAAGGTACGACAGTCTTCC +
Preference number: 3 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRICFFS*KVRQSS
Trigger: GGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGAT...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCGGCCATCATCATCTCTaGCCTAATTTCTTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIGHHHL*PNFFLQ
Trigger: CTGGAGAAAGAAATTAGGCAAGAGATGATGATGGCC...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 72 bp GCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAGCATTTCCTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: ASLLSVTGTCPL*RPDEPEHFLFL
Trigger: CAAGAAGAGGAAATGCTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 72 bp AACAGAGTCCATCCTTTTTCTCTTCCCTGGTTTCCCTaGGGCCTGAACAGTTGCCTTGTATGCCTTATCAAT +
Preference number: 3 (lower is better)
Translates to: NRVHPFSLPWFP*GLNSCLVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAGAGAAAAAGGATGGACTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 72 bp TCCTGTGTTCAGCTAAGCTCTTGTTCGAAGGGAGAATaGATAAGGCTGGGATTCCTTGGTGTTCTTACCATC +
Preference number: 3 (lower is better)
Translates to: SCVQLSSCSKGE*IRLGFLGVLTI
Trigger: GATGGTAAGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGCTGAACACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR-3UTR CAA 90 bp TTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAACTTTTCTCTGAAGTCTGAGTaGAGTACCCTTCCTCTATCA +
Preference number: 3 (lower is better)
Translates to: FPWGLNSCLVCLINSQNFSLKSE*STLPLS
Trigger: TGATAGAGGAAGGGTACTCAACTCAGACTTCAGAGA...AAAGTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp ATTGTGATAGGTATAGGGACCATGACAATGGGATTTTaGAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCT +
Preference number: 3 (lower is better)
Translates to: IVIGIGTMTMGF*SGGEREIGLNS
Trigger: AGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680004.1
3UTR CCA 72 bp GACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTaGGCTCAACTCTCAATACAGCATGGGAAGTATAAC +
Preference number: 3 (lower is better)
Translates to: DNGILQWGRKRN*AQLSIQHGKYN
Trigger: GTTATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR CCA 72 bp GATAGGTATAGGGACCATGACAATGGGATTTTGCAGTaGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATA +
Preference number: 3 (lower is better)
Translates to: DRYRDHDNGILQ*GRKRNWAQLSI
Trigger: TATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR-3UTR CAA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCTGTTGCTCCCTCTGCTaGGGACATTCTTCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFCCSLC*GHSSPF
Trigger: AAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAACA...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATATCTGTTTCTTTTCTTaGAAGGTACGACAGTCTTCC +
Preference number: 3 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYICFFS*KVRQSS
Trigger: GGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGAT...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 72 bp ATGTCATCATGTCACTGGGTCTTGTTTGACCTAGGATaGCACAATCCAGATTTATCGGACTGGCTTATATGG +
Preference number: 3 (lower is better)
Translates to: MSSCHWVLFDLG*HNPDLSDWLIW
Trigger: CCATATAAGCCAGTCCGATAAATCTGGATTGTGTCATCCTAGGTCAAACAAGACCCAGTGACATGATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR CCA 72 bp AACACTTCCATCATAATTGCCTATGTAGATTCCATCTaGGCTGGGCCCATCTCATTCTTATTCCACTCTGAA +
Preference number: 3 (lower is better)
Translates to: NTSIIIAYVDSI*AGPISFLFHSE
Trigger: TTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTACATAGGCAATTATGATGGAAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR-3UTR CAA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTCTCTGAAGTCTGAGTaGAGTACCCTTCCTCTATCA +
Preference number: 3 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMSLKSE*STLPLS
Trigger: TGATAGAGGAAGGGTACTCAACTCAGACTTCAGAGA...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR TCA 72 bp CCAACTCCTTGGCCCATAGTAGACTCTCAATTAATCTaGTTAAATGAAGGTACTGTGAACAGGTACTATGGT +
Preference number: 3 (lower is better)
Translates to: PTPWPIVDSQLI*LNEGTVNRYYG
Trigger: ACCATAGTACCTGTTCACAGTACCTTCATTTAATCAGATTAATTGAGAGTCTACTATGGGCCAAGGAGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
3UTR GCA 72 bp GTAAAGGGGATTTGCATTAAAACCTTACAAGATTCTTaGCAAAGACAGGCTGAGGTAATCAGATATCACCTG +
Preference number: 3 (lower is better)
Translates to: VKGICIKTLQDS*QRQAEVIRYHL
Trigger: CAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGAATCTTGTAAGGTTTTAATGCAAATCCCCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp TCCCCAGTGCTGAGGGCCCCTGCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCGCAGCGCCCGCAGCCTaGACATCCAGCTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SPVLRAPAAFWALHLAQVAAPAA*TSSSQS
Trigger: GCTCTGCGAGCTGGATGTCCAGGCTGCGGGCGCTGC...GACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACTGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp ACTCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCGCAGCGCCCGCAGCCTaGACATCCAGCTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLVQRAPRTLGPWSLHGAAAPAA*TSSSQS
Trigger: GCTCTGCGAGCTGGATGTCCAGGCTGCGGGCGCTGC...GGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR TCA 90 bp GGAAGTCCCCTCAGTTCCCACCTGAGGAACTCTCGTCCAACGAGCTCCACGTACCGATGGTCTGGCTTTTaGTCCGCGGCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: GSPLSSHLRNSRPTSSTYRWSGF*SAARAS
Trigger: GCTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCG...GTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGGTGGGAACTGAGGGGACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR GCA 90 bp AAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCAGCGCAGTGCTGAGGGCCCCTaGAGCGTTCTGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: KMLQQSPQSSGGILQTQRSAEGP*SVLGAA
Trigger: TGCAGCGCCCAGAACGCTGCAGGGGCCCTCAGCACT...GCGCTGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp AGTCCCAGAGGAGTGGGAAGTCCCCTCAGTTCCCACCTGAGGAACTCTCGTCCAGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: SPRGVGSPLSSHLRNSRPAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...TGGACGAGAGTTCCTCAGGTGGGAACTGAGGGGACTTCCCACTCCTCTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp CTCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCATCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSNELHVPLGRGLFMGPSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...TGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp AACTCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCGTACCCTTGGGCCGTaGTCTCTTCATGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NSRPTSSTYPWAVVSSWGRTLGP*SLHGAN
Trigger: GTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACG...GCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR TCA 90 bp AGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCAACATGTAAAGGGGCTGGATCCCAGCACCTaGGGGAATGTCGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSTYPWAVVSSWGQHVKGLDPST*GNVDAG
Trigger: GCCAGCATCGACATTCCCTCAGGTGCTGGGATCCAG...CCCCTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR TCA 90 bp CGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCAACATCCCTCAGTTCCCACCTaGGGAACTCTCGTCCAACGA +
Preference number: 4 (lower is better)
Translates to: RPTSSTYPWAVVSSWGQHPSVPT*GTLVQR
Trigger: TCGTTGGACGAGAGTTCCTCAGGTGGGAACTGAGGG...ATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp AGGAACTCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: RNSRPTSSTYPWAVVSSWRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...CCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp GGGCCTGGGACCTGTGGCGTAGGCAGTCATGATATGTCACCCATTCACTGGTACGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: GPGTCGVGSHDMSPIHWYAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...GTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CCA 90 bp CAAGTGGAACAGCCTCGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: QVEQPRNLRKWARSRSQFAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...AAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp CTCTGGGGGCATCCTTCAGACTCAGCGCTTCAGACCTCTGTTTTTCCTGTGTTCGCCCCTGCAGCGTTCTaGGCGCTGCACCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LWGHPSDSALQTSVFPVFAPAAF*ALHLAQ
Trigger: CTGAGCCAGGTGCAGCGCCCAGAACGCTGCAGGGGC...GAACACAGGAAAAACAGAGGTCTGAAGCGCTGAGTCTGAAGGATGCCCCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR TCA 90 bp GATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATAGGGCGTCGATGGTCTGGCTTTTaGTCCGCGGCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: DLQVPWILPSVKGAAIGRRWSGF*SAARAS
Trigger: GCTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCG...ACGCCCTATTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp ATCAAGGGTGATCAGGTATCAAGAGAAGGGGGCTTAGGCTGGGCGCGGTGGCTCTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IKGDQVSREGGLGWARWLSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...GAGCCACCGCGCCCAGCCTAAGCCCCCTTCTCTTGATACCTGATCACCCTTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR CCA 90 bp CGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTGCATGTTTAGGGGATCACCAGGAGCCCTCAAAGCTCTaGGGGCATCCTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: RSGRCTWLRSCACLGDHQEPSKL*GHPSDS
Trigger: TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTC...CTGGTGATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp AAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCAGCGCTCTGGGCGCTGCACCTaGCTCAGGTCCTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: KMLQQSPQSSGGILQTQRSGRCT*LRSCAC
Trigger: ACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGA...GCGCTGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR TCA 90 bp GATAAAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCACGATGGTCTGGCTTTTaGTCCGCGGCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: DKDATAEPSKLWGHPSDSRWSGF*SAARAS
Trigger: GCTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCG...TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR TCA 90 bp GAGGTTACAGTGAGTGAGTCGATATCGCGCCACTGCCCTCAAGTCTGGGCAACAGATGGGAGGATCACTTaGGCCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EVTVSESISRHCPQVWATDGRIT*AQEAEV
Trigger: AACCTCCGCCTCCTGGGCTCAAGTGATCCTCCCATC...TGTTGCCCAGACTTGAGGGCAGTGGCGCGATATCGACTCACTCACTGTAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR GCA 90 bp CGTCCAACGAGCTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCAACATAATCGTCATGGGCTCTaGGGGCATTTCCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RPTSSTYPWAVVSSWGQHNRHGL*GHFPKE
Trigger: TTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATT...ATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR GCA 90 bp CGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTGCATGTTTAGGGGATCACCAGAATCGTCATGGGCTCTaGGGGCATTTCCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RSGRCTWLRSCACLGDHQNRHGL*GHFPKE
Trigger: TTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATT...CTGGTGATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR GCA 90 bp ACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCCATCCCCCAGCTCCCTaGCTACCATCTGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGTQDFRPPLSTVPIGGSHPPAP*LPSAQG
Trigger: CCCCTGGGCAGATGGTAGGCAGGGAGCTGGGGGATG...GCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTGCAGCGCCCGCAGCCTaGACATCCAGCTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PGLVSDFHHSLTFIARGAAAPAA*TSSSQS
Trigger: GCTCTGCGAGCTGGATGTCCAGGCTGCGGGCGCTGC...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp GCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTGCAGCGCCCGCAGCCTaGACATCCAGCTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVAYLDCPDPQQELRSSGAAPAA*TSSSQS
Trigger: GCTCTGCGAGCTGGATGTCCAGGCTGCGGGCGCTGC...ACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCCTGTGCATGTTTAGGGGATCACCAGGTGTCCGTGGTGGAGGATGCTCAAAGAGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: SCACLGDHQVSVVEDAQRAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...TCTTTGAGCATCCTCCACCACGGACACCTGGTGATCCCCTAAACATGCACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp ATCAAGGGTGATCAGGTATCAAGAGAAGGGGGCTTAGGCTGGGCGCGGTGGCTCCTCCAGCCGGCAAATTaGGCTCCGCAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: IKGDQVSREGGLGWARWLLQPAN*APQWFL
Trigger: GAGAAACCATTGCGGAGCCCAATTTGCCGGCTGGAG...GAGCCACCGCGCCCAGCCTAAGCCCCCTTCTCTTGATACCTGATCACCCTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR TCA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCGATGGTCTGGCTTTTaGTCCGCGGCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGLVSDFHHSLTFIARGARWSGF*SAARAS
Trigger: GCTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCG...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR GCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTCGCTCACTGTCCTCTaGAGGCAAAGGCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEISLTVL*RQRPRP
Trigger: CGGCCGAGGCCTTTGCCTGCAGAGGACAGTGAGCGA...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEIAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GAGGTTACAGTGAGTGAGTCGATATCGCGCCACTGCCCTCAAGTCTGGGCAACATCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EVTVSESISRHCPQVWATSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...TGTTGCCCAGACTTGAGGGCAGTGGCGCGATATCGACTCACTCACTGTAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GCTCTCAGGGTGACACTGAAGCAAGACACTCATGGGGTAAGACTGGGTGGACTGTGTGAACAGGTACTATaGTCGGGGTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: ALRVTLKQDTHGVRLGGLCEQVL*SGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACA...CAGTCCACCCAGTCTTACCCCATGAGTGTCTTGCTTCAGTGTCACCCTGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp GAGGTTACAGTGAGTGAGTCGATATCGCGCCACTGCCCTCAAGTCTGGGCAACACCGCGGACGTCTCTATaGTTTCGACAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVTVSESISRHCPQVWATPRTSL*FRQPEG
Trigger: TCCCTCAGGCTGTCGAAACCATAGAGACGTCCGCGG...TGTTGCCCAGACTTGAGGGCAGTGGCGCGATATCGACTCACTCACTGTAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680661.1
CDS-3UTR CCA 90 bp CTCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCCGGAACCTCCGAAAATaGGCACGCTCCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRNGFSWKNRDFGSRGRLRNLRK*ARSRSQ
Trigger: CTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCG...GAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680269.1
3UTR CAA 72 bp CCTGAGGAACTCTCGTCCAACGAGCTCCACGTACCCTaGGGCCGTGGTCTCTTCATGGGGCCAACATGTAAA +
Preference number: 4 (lower is better)
Translates to: PEELSSNELHVP*GRGLFMGPTCK
Trigger: TTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
3UTR CAA 72 bp CTCTCAATGCTTCCCTGGAGTTTTCCTTCCTCGTATTaGCGCCCGGGACTAGCTCAGTGTAGGACGCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSMLPWSFPSSY*RPGLAQCRTRS
Trigger: GCTCCGCGTCCTACACTGAGCTAGTCCCGGGCGCAAATACGAGGAAGGAAAACTCCAGGGAAGCATTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR TCA 90 bp GAGGTTACAGTGAGTGAGTCGATATCGCGCCACTGCCCTCAAGTCTGGGCAACACTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACG +
Preference number: 4 (lower is better)
Translates to: EVTVSESISRHCPQVWATLLEKP*FWFPRT
Trigger: CGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAG...TGTTGCCCAGACTTGAGGGCAGTGGCGCGATATCGACTCACTCACTGTAACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR TCA 90 bp CACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTGGCTTACGCGATGGGAGGATCACTTaGGCCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HTMVSQKVFDEAGHGGLRDGRIT*AQEAEV
Trigger: AACCTCCGCCTCCTGGGCTCAAGTGATCCTCCCATC...GCGTAAGCCACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GATAAAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCACGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: DKDATAEPSKLWGHPSDSRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp GATATCAAGGGTGATCAGGTATCAAGAGAAGGGGGCTTAGGCTGGGCGCGGTGGGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: DIKGDQVSREGGLGWARWVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...CCACCGCGCCCAGCCTAAGCCCCCTTCTCTTGATACCTGATCACCCTTGATATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR CCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTGTGAACAGGTACTATaGTCGGGGTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PDPQQELRSSGSVDPAICCEQVL*SGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACA...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTACGCGGAGCCGTTCTTaGCATCCTGAGAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SAMVSPGKTVILVPADVSTRSRS*HPERAS
Trigger: ACTGGCCCTCTCAGGATGCCAAGAACGGCTCCGCGT...AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp CTCCAAGTCCCACTGGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTACGCGGAGCCGTTCTTaGCATCCTGAGAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQVPLACPPSNPTQGPKFTRSRS*HPERAS
Trigger: ACTGGCCCTCTCAGGATGCCAAGAACGGCTCCGCGT...AAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGGGACTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAGGCAAGAGGCCTGTGTaGGGGGTGCCTTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VDSIWAGPISFLFHSESPGKRPV*GVPCEV
Trigger: GACCTCACAAGGCACCCCCCACACAGGCCTCTTGCC...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CTGCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTGCATGTTTAGGGGATTACTCCCACTGGTGTTaGTGTTTTCTATACTGCCCC +
Preference number: 4 (lower is better)
Translates to: LQRSGRCTWLRSCACLGDYSHWC*CFLYCP
Trigger: GGGGCAGTATAGAAAACACCAACACCAGTGGGAGTA...ATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp CTGCAGCGTTCTGGGCGCTGCACCTGGCTCAGGTCCTGTGCATGTTTAGGGGATAAGGCTGGGATTCCTTaGTGTTCTTACCATCACGGT +
Preference number: 4 (lower is better)
Translates to: LQRSGRCTWLRSCACLGDKAGIP*CSYHHG
Trigger: ACCGTGATGGTAAGAACACCAAGGAATCCCAGCCTT...ATCCCCTAAACATGCACAGGACCTGAGCCAGGTGCAGCGCCCAGAACGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR TCA 90 bp CTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCATAGTGGGATCCTGTaGCCAGCCTTGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LPRPSAGIEIFRFRGSCHHSGIL*PALLLL
Trigger: AAGCAACAGCAAGGCTGGTCACAGGATCCCACTATG...ATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp CTCAATGCTTCCCTGGAGTTTTCCTTCCTCGTATTTGCGCCCGGGACTAGCTCACCGTTCTTGGCATCCTaGGAGGGCCAGTTAGTACTG +
Preference number: 4 (lower is better)
Translates to: LNASLEFSFLVFAPGTSSPFLAS*EGQLVL
Trigger: CAGTACTAACTGGCCCTCTCAGGATGCCAAGAACGG...TGAGCTAGTCCCGGGCGCAAATACGAGGAAGGAAAACTCCAGGGAAGCATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR GCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCAGGTTCCGTGGATCCTaGCATCTGTTAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPRFRGS*HLLREQ
Trigger: CTGCTCCCTTAACAGATGGCAGGATCCACGGAACCT...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGTCCCTGCCTACCATCTaGCCAGGGGAAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRSLPTI*PGESHH
Trigger: ATGATGGCTTTCCCCTGGGCAGATGGTAGGCAGGGA...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp ATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAAGCAGCGCCCGCAGCCTaGACATCCAGCTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: MTMGFCSGGEREIGLNSQAAPAA*TSSSQS
Trigger: GCTCTGCGAGCTGGATGTCCAGGCTGCGGGCGCTGC...TTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp TCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SQARLGVPLNQDLCLMRLRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...AAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCAGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEISLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGGGCATCCTTCAGACTCAGCGCTTCAGACCTCTGTTTTTCCTGTGTTCAGCTATCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GASFRLSASDLCFSCVQLSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...TAGCTGAACACAGGAAAAACAGAGGTCTGAAGCGCTGAGTCTGAAGGATGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp GACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DWNPGLQASTFYCTNRRKSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...CTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTTGTGAACAGGTACTATaGTCGGGGTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSCEQVL*SGWSGA
Trigger: TGCCCCGCTCCACCCCGACCATAGTACCTGTTCACA...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATAGGGCGTCTATACTGCCCAGGCTaGACTCAAGCAATCCCGCCT +
Preference number: 4 (lower is better)
Translates to: DLQVPWILPSVKGAAIGRLYCPG*TQAIPP
Trigger: AGGCGGGATTGCTTGAGTCCAGCCTGGGCAGTATAG...ACGCCCTATTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp GCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTAGGTGTGCCACTCCTGTaGCCCCAGCTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AVGEKEKLGSTLNTAWEVGVPLL*PQLLGR
Trigger: CCTCCCAAGTAGCTGGGGCCACAGGAGTGGCACACC...TACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR CAA 72 bp GGCTCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTaGGTTCCCGCGGACGTCTCTATGGTTTCGACAGCC +
Preference number: 4 (lower is better)
Translates to: GSAMVSPGKTVI*VPADVSMVSTA
Trigger: GGCTGTCGAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000681523.1
CDS-3UTR TCA 90 bp ATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAACGATGGTCTGGCTTTTaGTCCGCGGCACGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: MTMGFCSGGEREIGLNSQRWSGF*SAARAS
Trigger: GCTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCG...TTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp GATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATAGGGCGTACCCTCAGCAGGAATTaGGATCTTCAGGTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: DLQVPWILPSVKGAAIGRTLSRN*DLQVPW
Trigger: CCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGT...ACGCCCTATTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGATGGATGGTGAAGGAGGCAGGAGGAATGCTTaGGCCCAGGAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SCQRQAEVIRYHLMDGEGGRRNA*AQELEA
Trigger: GGCCTCCAACTCCTGGGCTCAAGCATTCCTCCTGCC...TCCTTCACCATCCATCAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR TCA 90 bp CAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATGGCAGGAGGAATGCTTaGGCCCAGGAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QWGRKRNWAQLSIQHGKYGRRNA*AQELEA
Trigger: GGCCTCCAACTCCTGGGCTCAAGCATTCCTCCTGCC...ATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp CAAAAATTAGCCAGGTATGGTGTGCCACTCCTGTGGCCCCAGCTACTTGGGAGGTCACCTGATGGATGGTaGAGGATGAGGAACCTGATC +
Preference number: 4 (lower is better)
Translates to: QKLARYGVPLLWPQLLGRSPDGW*RMRNLI
Trigger: GATCAGGTTCCTCATCCTTCACCATCCATCAGGTGA...CCTCCCAAGTAGCTGGGGCCACAGGAGTGGCACACCATACCTGGCTAATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp CACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTGGCTTACGCCAAGGATTGCAGGGATaGGGCAAGTGGAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: HTMVSQKVFDEAGHGGLRQGLQG*GKWNSL
Trigger: GAGGCTGTTCCACTTGCCTCATCCCTGCAATCCTTG...GCGTAAGCCACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR GCA 90 bp AGTCTCACTCCCCACCCCAACCTTTGTGGAGGATGGACTTCTCCACAAAGCATCAGGTTCCGTGGATCCTaGCATCTGTTAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLTPHPNLCGGWTSPQSIRFRGS*HLLREQ
Trigger: CTGCTCCCTTAACAGATGGCAGGATCCACGGAACCT...GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGAGTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCGTTGCTTACTTAGACTaGCCAGACCCTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPVAYLD*PDPQQE
Trigger: TTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAAC...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp CAAAGCTCTGGGGGCATCCTTCAGACTCAGCGCTTCAGACCTCTGTTTTTCCTGCTGGCTCAGGTCCTGTaGATGTTTAGGGGATCACCA +
Preference number: 4 (lower is better)
Translates to: QSSGGILQTQRFRPLFFLLAQVL*MFRGSP
Trigger: TGGTGATCCCCTAAACATGCACAGGACCTGAGCCAG...CAGGAAAAACAGAGGTCTGAAGCGCTGAGTCTGAAGGATGCCCCCAGAGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCACGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp TTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: FAVGEKEKLGSTLNTAWEAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...TTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGGTGGTGTTCAGGAAGAGGCCAGATGTCTCGTCCCCTTCTACACCTTAGTTTAGCCGTGGTCTCTTCATaGGGCCAACATGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GWCSGRGQMSRPLLHLSLAVVSS*GQHVKG
Trigger: CCCCTTTACATGTTGGCCCCATGAAGAGACCACGGC...TAAACTAAGGTGTAGAAGGGGACGAGACATCTGGCCTCTTCCTGAACACCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp ACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCCTTCCCTGGTTTCCCTaGGGCCTGAACAGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TGTQDFRPPLSTVPIGGSLPWFP*GLNSCL
Trigger: AAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAG...GCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTGGCATGTCAATTGGGCTCCGCAATaGTTTCTCCTGGAAAAACCG +
Preference number: 4 (lower is better)
Translates to: EPPRLTHPVSFSKSHWHVNWAPQ*FLLEKP
Trigger: CGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATT...GACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCCGCGGACGTCTCTATaGTTTCGACAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRPRTSL*FRQPSL
Trigger: GAGGGAAGGCTGTCGAAACCATAGAGACGTCCGCGG...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp AGTCTCACTCCCCACCCCAACCTTTGTGGAGGATGGACTTCTCCACAAAGCATCGGGGTAATAGATGGTTaGCTCGTAGCCCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: SLTPHPNLCGGWTSPQSIGVIDG*LVALGD
Trigger: ATCGCCAAGGGCTACGAGCCAACCATCTATTACCCC...GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGAGTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCGAAGCAAGACACTCATaGGGTAAGACTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTEARHS*GKTGWT
Trigger: AGTCCACCCAGTCTTACCCCATGAGTGTCTTGCTTC...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp AAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCAGCGCACCAGGTGTCCGTGGTaGAGGATGCTCAAAGATAAA +
Preference number: 4 (lower is better)
Translates to: KMLQQSPQSSGGILQTQRTRCPW*RMLKDK
Trigger: TTTATCTTTGAGCATCCTCCACCACGGACACCTGGT...GCGCTGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR CAA 72 bp CCAGGTCCCAGTTTCTATGGCAACCATACCGGCAAATaGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTG +
Preference number: 4 (lower is better)
Translates to: PGPSFYGNHTGK*GSAMVSPGKTV
Trigger: CACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR TCA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGGTTGGTCTCTaGCTTCCACCATTCACTGAC +
Preference number: 4 (lower is better)
Translates to: PGLVSDFHHSLTFIARGAPRVGL*LPPFTD
Trigger: GTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGGG...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR TCA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRGTCPL*RPDEPE
Trigger: CTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCC...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTCCCCCTTTACCTTCTaGGTTTCTCTTATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CPDPQQELRSSGSVDPAISPFTF*VSLILQ
Trigger: CTGGAGGATAAGAGAAACTCAGAAGGTAAAGGGGGA...GATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCTCCCCCTTTACCTTCTaGGTTTCTCTTATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPSPFTF*VSLILQ
Trigger: CTGGAGGATAAGAGAAACTCAGAAGGTAAAGGGGGA...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACG +
Preference number: 4 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRLLEKP*FWFPRT
Trigger: CGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAG...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR TCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCCGTTCTTGGCATCCTaGGAGGGCCAGTTAGTACTG +
Preference number: 4 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRPFLAS*EGQLVL
Trigger: CAGTACTAACTGGCCCTCTCAGGATGCCAAGAACGG...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR TCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTGAAACTGGGCAGGTATaGGCTCTTGATAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: PDPQQELRSSGSVDPAICETGQV*ALDRWA
Trigger: TGCCCATCTATCAAGAGCTCATACCTGCCCAGTTTC...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATAGGGCGTTGGGATGAAGTTTGCTaGGGAGCAGCTGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: DLQVPWILPSVKGAAIGRWDEVC*GAAAKA
Trigger: TGCTTTAGCAGCTGCTCCTCAGCAAACTTCATCCCA...ACGCCCTATTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR TCA 90 bp TCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTGGTGAGAGGATTGCTTaGGTCCAGGAGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SAMVSPGKTVILVPADVSGERIA*VQEIEA
Trigger: AGCCTCAATCTCCTGGACTCAAGCAATCCTCTCACC...AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR GCA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCCCATCTTCAGGTTATTaGACATGTTGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTPSSGY*TCCSLC
Trigger: GCAGAGGGAGCAACATGTGCAATAACCTGAAGATGG...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCCCATCTTCAGGTTATTaGACATGTTGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CPDPQQELRSSGSVDPAIPSSGY*TCCSLC
Trigger: GCAGAGGGAGCAACATGTGCAATAACCTGAAGATGG...GATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp AGTCTCACTCCCCACCCCAACCTTTGTGGAGGATGGACTTCTCCACAAAGCATCGACCAGCCTTGCTGTTaGTTACTTAGACTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLTPHPNLCGGWTSPQSIDQPCC*LLRLPR
Trigger: TCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTC...GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGAGTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTTGGCTGCTCAAGGATTaGAGGGATGAGGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SAMVSPGKTVILVPADVSWLLKD*RDEASG
Trigger: TCCACTTGCCTCATCCCTGCAATCCTTGAGCAGCCA...AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR GCA 90 bp CACGCCACTGCACTCCAGCCGGCAAATTGGGCTCCGCAATGGTTTCTCCTGGAAATGACAATGGGATTTTaGAGTGGGGGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: HATALQPANWAPQWFLLEMTMGF*SGGERE
Trigger: TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT...TTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGCTGGAGTGCAGTGGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR GCA 90 bp TTTTTCCTGTGTTCAGCTAAGCTCTTGTTCGAAGGGAGAATGAATAAGGCTGGGCAGCGTTCTGGGCGCTaGACCTGGCTCAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FFLCSAKLLFEGRMNKAGQRSGR*TWLRSC
Trigger: ACAGGACCTGAGCCAGGTGCAGCGCCCAGAACGCTG...CCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGCTGAACACAGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: GILQWGRKRNWAQLSIQHRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...ATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR CCA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCATCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GGTGGTGTTCAGGAAGAGGCCAGATGTCTCGTCCCCTTCTACACCTTAGTTTACGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: GGVQEEARCLVPFYTLVYVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...GTAAACTAAGGTGTAGAAGGGGACGAGACATCTGGCCTCTTCCTGAACACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp TCTGGGGGCATCCTTCAGACTCAGCGCTTCAGACCTCTGTTTTTCCTGTGTTCAGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SGGILQTQRFRPLFFLCSVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...TGAACACAGGAAAAACAGAGGTCTGAAGCGCTGAGTCTGAAGGATGCCCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp GCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTAGCAGCAATAGGGCGTaGGAGGTAGGGTACAGTCTC +
Preference number: 4 (lower is better)
Translates to: AVAYLDCPDPQQELRSSGSSNRA*EVGYSL
Trigger: GAGACTGTACCCTACCTCCCACGCCCTATTGCTGCT...ACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCGATCTTCAGGTTCCGTaGATCCTGCCATCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPDLQVP*ILPSVK
Trigger: CTTAACAGATGGCAGGATCCACGGAACCTGAAGATC...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCGATCTTCAGGTTCCGTaGATCCTGCCATCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTDLQVP*ILPSVK
Trigger: CTTAACAGATGGCAGGATCCACGGAACCTGAAGATC...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTGGCATGTCAGGTCCCAGTTTCTATaGCAACCATACCGGCAAATT +
Preference number: 4 (lower is better)
Translates to: EPPRLTHPVSFSKSHWHVRSQFL*QPYRQI
Trigger: AATTTGCCGGTATGGTTGCCATAGAAACTGGGACCT...GACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp TCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCATACCGGCAAAAGTACTGAAGTCCCTTaGCTGCTCAAGGATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SENGHAPGPSFYGNHTGKSTEVP*LLKDCR
Trigger: CCTGCAATCCTTGAGCAGCCAAGGGACTTCAGTACT...TTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp CAAGTGGAACAGCCTCGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTCTCAATGCTTCCCTaGAGTTTTCCTTCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: QVEQPRNLRKWARSRSQFLSMLP*SFPSSY
Trigger: ATACGAGGAAGGAAAACTCCAGGGAAGCATTGAGAG...AAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp CACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTGGCTTACGCGAAATTAGCCAGGCGTaGCGGTGCATGACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: HTMVSQKVFDEAGHGGLREISQA*RCMTVV
Trigger: TACCACAGTCATGCACCGCCACGCCTGGCTAATTTC...GCGTAAGCCACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp CTCCAAGTCCCACTGGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTGAAATTAGCCAGGCGTaGCGGTGCATGACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LQVPLACPPSNPTQGPKFEISQA*RCMTVV
Trigger: TACCACAGTCATGCACCGCCACGCCTGGCTAATTTC...AAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGGGACTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp ACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACGGTGTGCCACTCCTGTaGCCCCAGCTACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TMGFCSGGEREIGLNSQYGVPLL*PQLLGR
Trigger: CCTCCCAAGTAGCTGGGGCCACAGGAGTGGCACACC...GTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGTGGCGTAGGCAGTCATaGTATGTCACCCATTCACTG +
Preference number: 4 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRWRRQS*YVTHSL
Trigger: CAGTGAATGGGTGACATATCATGACTGCCTACGCCA...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTACTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACG +
Preference number: 4 (lower is better)
Translates to: AVGEKEKLGSTLNTAWEVLLEKP*FWFPRT
Trigger: CGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAG...TACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR TCA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCAAGGATTGCAGGGATaGGGCAAGTGGAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMQGLQG*GKWNSL
Trigger: GAGGCTGTTCCACTTGCCTCATCCCTGCAATCCTTG...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR TCA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTGGCATGTCTCTGGCACACAATGGTaGGTCAAAAAGTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: EPPRLTHPVSFSKSHWHVSGTQW*VKKCLM
Trigger: CATCAAACACTTTTTGACTCACCATTGTGTGCCAGA...GACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR TCA 90 bp CTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATGAGCTCTGAAACTGGGCAGGTATaGGCTCTTGATAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: LQQDCGQLGSGNWAGMSSETGQV*ALDRWA
Trigger: TGCCCATCTATCAAGAGCTCATACCTGCCCAGTTTC...AGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGGGCTTCAGGGAGCCATaGTCACGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKGFREP*SRHCTP
Trigger: TGGAGTGCAGTGGCGTGATCATGGCTCCCTGAAGCC...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR GCA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTAATCGTCATGGGCTCTaGGGGCATTTCCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: PGLVSDFHHSLTFIARGANRHGL*GHFPKE
Trigger: TTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATT...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR GCA 90 bp AGTCCCAGAGGAGTGGGAAGTCCCCTCAGTTCCCACCTGAGGAACTCTCGTCCACAGAAAGCTGTGTTCTaGCCCTCTAGACTAAAATTA +
Preference number: 4 (lower is better)
Translates to: SPRGVGSPLSSHLRNSRPQKAVF*PSRLKL
Trigger: TAATTTTAGTCTAGAGGGGCAGAACACAGCTTTCTG...TGGACGAGAGTTCCTCAGGTGGGAACTGAGGGGACTTCCCACTCCTCTGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR GCA 90 bp GATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATAGGGCGTTTATATGGCTCTGCATaGCTGTTCCTGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: DLQVPWILPSVKGAAIGRLYGSA*LFLPSP
Trigger: TGGAGATGGCAGGAACAGGCATGCAGAGCCATATAA...ACGCCCTATTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAAAGGTTCCGTGGATCCTaGCATCTGTTAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GIEIFRFRGSCHLLREQQRFRGS*HLLREQ
Trigger: CTGCTCCCTTAACAGATGGCAGGATCCACGGAACCT...TTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTGACCAGCCTTGCTGTTaGTTACTTAGACTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSDQPCC*LLRLPR
Trigger: TCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTC...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTTGGCTGCTCAAGGATTaGAGGGATGAGGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRWLLKD*RDEASG
Trigger: TCCACTTGCCTCATCCCTGCAATCCTTGAGCAGCCA...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR GCA 90 bp TCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCATACCGGCAAAAGCTATCACCTACTCTaGCTCCACGAATTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SENGHAPGPSFYGNHTGKSYHLL*LHEFLR
Trigger: CCTGAGAAATTCGTGGAGGCAGAGTAGGTGATAGCT...TTTGCCGGTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR GCA 90 bp TGGTATCACTCAGGCTCTCAGGGTGACACTGAAGCAAGACACTCATGGGGTAAGACAGGTGTGTGCCACTaGACCCAACTAGCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: WYHSGSQGDTEARHSWGKTGVCH*TQLAEN
Trigger: ATTCTCTGCTAGTTGGGTGCAGTGGCACACACCTGT...CTTACCCCATGAGTGTCTTGCTTCAGTGTCACCCTGAGAGCCTGAGTGATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp GGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATAACTCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: GGEREIGLNSQYSMGSITRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...AGTTATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp GCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTTTTATCCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: ARLGVPLNQDLCLMRLFIRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...GATAAAAAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGCGACAGGCGATGGTCTaGCTTTTGATCCGCGGCACG +
Preference number: 4 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKRQAMV*LLIRGT
Trigger: CGTGCCGCGGATCAAAAGCCAGACCATCGCCTGTCG...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR CCA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: PGLVSDFHHSLTFIARGAVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAATCCCCAGGGTTaGTCTCTGACTTCCACCATT +
Preference number: 4 (lower is better)
Translates to: PGLVSDFHHSLTFIARGAPNPQG*SLTSTI
Trigger: AATGGTGGAAGTCAGAGACCAACCCTGGGGATTGGG...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp TACACCTTAGTTTACCCTAGTCCCAGAGGAGTGGGAAGTCCCCTCAGTTCCCACATTTTAGACCTGGTGTaGGCAAGAGTCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: YTLVYPSPRGVGSPLSSHILDLV*ARVRRV
Trigger: TACCCTCCTGACTCTTGCCCACACCAGGTCTAAAAT...GTGGGAACTGAGGGGACTTCCCACTCCTCTGGGACTAGGGTAAACTAAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CCA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCGTACTATGGTCGGGGTaGAGCGGGGCATCTTTACTG +
Preference number: 4 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIVLWSG*SGASLL
Trigger: CAGTAAAGATGCCCCGCTCCACCCCGACCATAGTAC...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAAATGGCAAACAGGACTaGAACCCAGGACTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VDSIWAGPISFLFHSESPNGKQD*NPGLQA
Trigger: GGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATT...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGAATGGCAAACAGGACTaGAACCCAGGACTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWNGKQD*NPGLQA
Trigger: GGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATT...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp CCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCAAGCAGCAATAGGGCGTaGGAGGTAGGGTACAGTCTC +
Preference number: 4 (lower is better)
Translates to: PISLHLCYHLLPHFGPSSSSNRA*EVGYSL
Trigger: GAGACTGTACCCTACCTCCCACGCCCTATTGCTGCT...TGATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGACTTGAGCCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CDRYRDHDNGILQWGRKRLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCCAACTCCTGGGCTCAAG...TCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp CCACTGGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTCCCAGGCTAAATTGGGCTCCGCAATaGTTTCTCCTGGAAAAACCG +
Preference number: 4 (lower is better)
Translates to: PLACPPSNPTQGPKFPRLNWAPQ*FLLEKP
Trigger: CGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATT...TAGCCTGGGAAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTTTTATCCGGAACCTCCGAAAATaGGCACGCTCCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ARLGVPLNQDLCLMRLFIRNLRK*ARSRSQ
Trigger: CTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCG...GATAAAAAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp CACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTGGCTTACGCAGTACTGAAGTCCCTTaGCTGCTCAAGGATTGCAGG +
Preference number: 4 (lower is better)
Translates to: HTMVSQKVFDEAGHGGLRSTEVP*LLKDCR
Trigger: CCTGCAATCCTTGAGCAGCCAAGGGACTTCAGTACT...GCGTAAGCCACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp CTCAATGCTTCCCTGGAGTTTTCCTTCCTCGTATTTGCGCCCGGGACTAGCTCATTCTCCAAGTCCCACTaGCATGTCCTCCATCTAATC +
Preference number: 4 (lower is better)
Translates to: LNASLEFSFLVFAPGTSSFSKSH*HVLHLI
Trigger: GATTAGATGGAGGACATGCCAGTGGGACTTGGAGAA...TGAGCTAGTCCCGGGCGCAAATACGAGGAAGGAAAACTCCAGGGAAGCATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp GCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTCCAATGTCAGGTGTGTaGAATGGCAAGAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AVAYLDCPDPQQELRSSGPMSGV*NGKRPV
Trigger: CACAGGCCTCTTGCCATTCCACACACCTGACATTGG...ACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTCTGGTCTGGAACTCCTaGGCTCAAGTGATTCTTCTA +
Preference number: 4 (lower is better)
Translates to: PDPQQELRSSGSVDPAICLVWNS*AQVILL
Trigger: TAGAAGAATCACTTGAGCCCAGGAGTTCCAGACCAG...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CTGTGCATGTTTAGGGGATCACCAGGTGTCCGTGGTGGAGGATGCTCAAAGATAATCACCAGGTGTCCGTaGTGGAGGATGCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LCMFRGSPGVRGGGCSKIITRCP*WRMLKD
Trigger: ATCTTTGAGCATCCTCCACCACGGACACCTGGTGAT...TATCTTTGAGCATCCTCCACCACGGACACCTGGTGATCCCCTAAACATGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
3UTR CAA 72 bp GTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATaGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: VAYLDCPDPQQE*RSSGSVDPAIC
Trigger: ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSILIPL*IPNSLA
Trigger: GGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAAT...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCCATAGTGGGATCCTGTaGCCAGCCTTGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIHSGIL*PALLLL
Trigger: AAGCAACAGCAAGGCTGGTCACAGGATCCCACTATG...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTATGGCGTAGGCAGTCATaGTATGTCACCCATTCACTG +
Preference number: 4 (lower is better)
Translates to: VMANRTGTQDFRPPLSTVWRRQS*YVTHSL
Trigger: CAGTGAATGGGTGACATATCATGACTGCCTACGCCA...TACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp CAAGTGGAACAGCCTCGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTTGTTCCTGTGAAGGCTaGGTATTCATGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: QVEQPRNLRKWARSRSQFCSCEG*VFMSIQ
Trigger: TTGAATACTCATGAATACTCAGCCTTCACAGGAACA...AAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR TCA 90 bp CTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATGAGCTCTAAACCACTGGTGGAATaGGCTCTTCAACAAGACTGC +
Preference number: 4 (lower is better)
Translates to: LQQDCGQLGSGNWAGMSSKPLVE*ALQQDC
Trigger: GCAGTCTTGTTGAAGAGCTCATTCCACCAGTGGTTT...AGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR TCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCAAACCACTGGTGGAATaGGCTCTTCAACAAGACTGC +
Preference number: 4 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEIKPLVE*ALQQDC
Trigger: GCAGTCTTGTTGAAGAGCTCATTCCACCAGTGGTTT...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGCCTCTTCTTCTCTGGTaGGAGTCTGAGGATAGAGAC +
Preference number: 4 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWPLLLW*ESEDRD
Trigger: GTCTCTATCCTCAGACTCTCACCAGAGAAGAAGAGG...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR TCA 90 bp GGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAACAGTCAGGATGGAACTaGTGGCTGTTTGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: GIEIFRFRGSCHLLREQQQSGWN*WLFGHF
Trigger: AAAGTGCCCAAACAGCCATCAGTTCCATCCTGACTG...TTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR TCA 90 bp GGGGCATCCTTCAGACTCAGCGCTTCAGACCTCTGTTTTTCCTGTGTTCAGCTACCACAGCATCTTTACTaGTGTATCTTCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GASFRLSASDLCFSCVQLPQHLY*CIFPHC
Trigger: GCAGTGAGGGAAGATACATCAGTAAAGATGCTGTGG...TAGCTGAACACAGGAAAAACAGAGGTCTGAAGCGCTGAGTCTGAAGGATGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR GCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTATATGGCTCTGCATaGCTGTTCCTGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEILYGSA*LFLPSP
Trigger: TGGAGATGGCAGGAACAGGCATGCAGAGCCATATAA...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGTGGGGCCTGAACAGTTaGCTTGTATGCCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRWGLNS*LVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCA...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AAAACCTTACAAGATTCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGGCCTGGGCCTCCTCCTaGCTCAGGTACTTCACCACC +
Preference number: 4 (lower is better)
Translates to: KTLQDSCQRQAEVIRYHLAWASS*LRYFTT
Trigger: GGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGC...CAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGAATCTTGTAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR CCA 90 bp GATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DRYRDHDNGILQWGRKRNSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...ATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCATTACCCCTAGAGAGATaGCACCCAATCCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPLPLER*HPIPRV
Trigger: AACCCTGGGGATTGGGTGCCATCTCTCTAGGGGTAA...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CCA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGTACTATGGTCGGGGTaGAGCGGGGCATCTTTACTG +
Preference number: 4 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLVLWSG*SGASLL
Trigger: CAGTAAAGATGCCCCGCTCCACCCCGACCATAGTAC...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAAGTTGCTCCCTCTGCTTaGGACATTCTTCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GIEIFRFRGSCHLLREQQVAPSA*DILLPF
Trigger: GAAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAAC...TTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATAGCAGCAATAGGGCGTaGGAGGTAGGGTACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYSSNRA*EVGYSL
Trigger: GAGACTGTACCCTACCTCCCACGCCCTATTGCTGCT...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTGATCTTCAGGTTCCGTaGATCCTGCCATCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSDLQVP*ILPSVK
Trigger: CTTAACAGATGGCAGGATCCACGGAACCTGAAGATC...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTACCATACCGGCAAATTaGGCTCCGCAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SQARLGVPLNQDLCLMRLTIPAN*APQWFL
Trigger: GAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGT...AAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTAAGGCCAGGGATTaGAGACCAGCCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: VSQARLGVPLNQDLCLMRLKARD*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCCAATCCCTGGCCTTAAG...ACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGCCGCGGACGTCTCTATaGTTTCGACAGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKPRTSL*FRQPSL
Trigger: GAGGGAAGGCTGTCGAAACCATAGAGACGTCCGCGG...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR CCA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGCTGCTAAAGCATGGATaGACTCAAGGTGATCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRLLKHG*TQGDPH
Trigger: ATGGGGATCACCTTGAGTCCATCCATGCTTTAGCAG...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTGTGATTCTTCTACCTTaGCCTTCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSVILLP*PSKVLG
Trigger: TCCCAGCACTTTGGAAGGCCAAGGTAGAAGAATCAC...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CTCTGGGGGCATCCTTCAGACTCAGCGCTTCAGACCTCTGTTTTTCCTGTGTTCCAGCTCTACTCCCACTaGTGTTGGTGTTTTCTATAC +
Preference number: 4 (lower is better)
Translates to: LWGHPSDSALQTSVFPVFQLYSH*CWCFLY
Trigger: GTATAGAAAACACCAACACCAGTGGGAGTAGAGCTG...GAACACAGGAAAAACAGAGGTCTGAAGCGCTGAGTCTGAAGGATGCCCCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR TCA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGCACTTGTCCACTGTaGAGACCTGATGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLGTCPL*RPDEPE
Trigger: CTCTGGTTCATCAGGTCTTCACAGTGGACAAGTGCC...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWILIPL*IPNSLA
Trigger: GGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAAT...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGACCCTCAGCAGGAATTaGGATCTTCAGGTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVTLSRN*DLQVPW
Trigger: CCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGT...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GTGGAACAGCCTCGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTAAAGGCTGAGTATTCATaGGTATTCAACCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: VEQPRNLRKWARSRSQFLKAEYS*VFNPEK
Trigger: TTTTTCAGGGTTGAATACTCATGAATACTCAGCCTT...TAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCGAGGCTGTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR GCA 90 bp TGTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATCGTCATGGGCTCTaGGGGCATTTCCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CDRYRDHDNGILQWGRKRNRHGL*GHFPKE
Trigger: TTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATT...TCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR GCA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTTTATATGGCTCTGCATaGCTGTTCCTGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: HWWNELFNKTAANLVVETLYGSA*LFLPSP
Trigger: TGGAGATGGCAGGAACAGGCATGCAGAGCCATATAA...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTTATCTGGACCATCCCTaGTTTGCAGATGTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSYLDHP*FADVAK
Trigger: TTTAGCCACATCTGCAAAGCAGGGATGGTCCAGATA...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTAGCTATCACCTACTCTaGCTCCACGAATTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQARLGVPLNQDLCLMRLSYHLL*LHEFLR
Trigger: CCTGAGAAATTCGTGGAGGCAGAGTAGGTGATAGCT...AAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: FCSGGEREIGLNSQYSMGVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...TCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTTACTGTCAGTCACTaGCACTTGTCCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEIFTVSH*HLSTVK
Trigger: CTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAA...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp CTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGGTATGAGCTCTTTTACTGTCAGTCACTaGCACTTGTCCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQQDCGQLGSGNWAGMSSFTVSH*HLSTVK
Trigger: CTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAA...AGAGCTCATACCTGCCCAGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAACTTTGTACTATGGTCGGGGTaGAGCGGGGCATCTTTACTG +
Preference number: 4 (lower is better)
Translates to: FPWGLNSCLVCLINSQNFVLWSG*SGASLL
Trigger: CAGTAAAGATGCCCCGCTCCACCCCGACCATAGTAC...AAAGTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp ACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCAGATTCCATCTGGGCTaGGCCCATCTCATTCTTATT +
Preference number: 4 (lower is better)
Translates to: TGTQDFRPPLSTVPIGGSRFHLG*AHLILI
Trigger: AATAAGAATGAGATGGGCCCAGCCCAGATGGAATCT...GCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGCTAGTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTAACCTTTGTGGAGGATaGACTTCTCCACAAAGCATC +
Preference number: 4 (lower is better)
Translates to: WLVMANRTGTQDFRPPLSNLCGG*TSPQSI
Trigger: GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTT...AGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTACTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTTTCTCCAAGTCCCACTaGCATGTCCTCCATCTAATC +
Preference number: 4 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLFSKSH*HVLHLI
Trigger: GATTAGATGGAGGACATGCCAGTGGGACTTGGAGAA...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGTCATATTTATTCCCCTaGCAGGTAGGACATGACCCT +
Preference number: 4 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRSYLFP*QVGHDP
Trigger: AGGGTCATGTCCTACCTGCCAGGGGAATAAATATGA...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR TCA 90 bp CCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCATCCCCCTTTACCTTCTaGGTTTCTCTTATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PISLHLCYHLLPHFGPSSSPFTF*VSLILQ
Trigger: CTGGAGGATAAGAGAAACTCAGAAGGTAAAGGGGGA...TGATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGTCTGTTTCTTTTCTTTaGAGGTACGACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRSVSFL*RYDSLP
Trigger: TGGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGA...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGAAGCCAGAGGAGACCTaGGAGATTATCTGGACCATC +
Preference number: 4 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVKPEET*EIIWTI
Trigger: GATGGTCCAGATAATCTCTCAGGTCTCCTCTGGCTT...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAACTTTCATAGTGGGATCCTGTaGCCAGCCTTGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: FPWGLNSCLVCLINSQNFHSGIL*PALLLL
Trigger: AAGCAACAGCAAGGCTGGTCACAGGATCCCACTATG...AAAGTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp ATTTGCATTAAAACCTTACAAGATTCTTGCCAAAGACAGGCTGAGGTAATCAGAGGCAGGAGGAATGCTTaGGCCCAGGAGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ICIKTLQDSCQRQAEVIRGRRNA*AQELEA
Trigger: GGCCTCCAACTCCTGGGCTCAAGCATTCCTCCTGCC...TCTGATTACCTCAGCCTGTCTTTGGCAAGAATCTTGTAAGGTTTTAATGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp TCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTTCTGGCACACAATGGTaGGTCAAAAAGTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SAMVSPGKTVILVPADVSSGTQW*VKKCLM
Trigger: CATCAAACACTTTTTGACTCACCATTGTGTGCCAGA...AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR TCA 90 bp TTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCTGGCAGGTAGGACATaGCCCTGCCAAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FSLKVRQSSIFRLLHMLLLAGRT*PCQGVH
Trigger: GTGAACTCCTTGGCAGGGTCATGTCCTACCTGCCAG...GAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR GCA 90 bp CTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCACTTCCATCATAATTaGCTATGTAGATTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LPRPSAGIEIFRFRGSCHHFHHN*LCRFHL
Trigger: CAGATGGAATCTACATAGGCAATTATGATGGAAGTG...ATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCCACTTCCATCATAATTaGCTATGTAGATTCCATCTG +
Preference number: 4 (lower is better)
Translates to: WAGPISFLFHSESPTPWPHFHHN*LCRFHL
Trigger: CAGATGGAATCTACATAGGCAATTATGATGGAAGTG...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTTATCTGGACCATCCCTaGTTTGCAGATGTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: HWWNELFNKTAANLVVETYLDHP*FADVAK
Trigger: TTTAGCCACATCTGCAAAGCAGGGATGGTCCAGATA...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCATATCTGGACCATCCCTaGTTTGCAGATGTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: VDSIWAGPISFLFHSESPYLDHP*FADVAK
Trigger: TTTAGCCACATCTGCAAAGCAGGGATGGTCCAGATA...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGACCAGCCTTGCTGTTaGTTACTTAGACTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLDQPCC*LLRLPR
Trigger: TCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTGGTC...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp CCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCATCCTGTGACCAGCCTTaGTGTTGCTTACTTAGACTG +
Preference number: 4 (lower is better)
Translates to: PISLHLCYHLLPHFGPSSSCDQP*CCLLRL
Trigger: CAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGA...TGATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCATGGGGCCTGAACAGTTaGCTTGTATGCCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: VDSIWAGPISFLFHSESPWGLNS*LVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCA...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp ACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACGTTCATCAATCGTCATaGGCTCTGCGGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: TMGFCSGGEREIGLNSQYVHQSS*ALRAFP
Trigger: GGGAAATGCCCGCAGAGCCCATGACGATTGATGAAC...GTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGGTTGCTCCCTCTGCTTaGGACATTCTTCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVVAPSA*DILLPF
Trigger: GAAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAAC...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGAACCTTTGTGGAGGATaGACTTCTCCACAAAGCATC +
Preference number: 4 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWNLCGG*TSPQSI
Trigger: GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTT...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AAAACCTTACAAGATTCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGCTTGAGCCCAGGAGTTaGAGGCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KTLQDSCQRQAEVIRYHLLEPRS*RPVWAT
Trigger: TGTTGCCCAGACTGGCCTCCAACTCCTGGGCTCAAG...CAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGAATCTTGTAAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp TCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGATGGATGGTGAAGGAAAAATTAGCCAGGTATaGTGTGCCACTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SCQRQAEVIRYHLMDGEGKISQV*CATPVA
Trigger: GGCCACAGGAGTGGCACACCATACCTGGCTAATTTT...TCCTTCACCATCCATCAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCAACTTCCACCATTCACTaGCTTTTATTGCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPTSTIH*LLLPEE
Trigger: CTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGT...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR TCA 90 bp GTGAAGGATGAGGAACCTGATCAGATATCAAGGGTGATCAGGTATCAAGAGAAGTCACCTGATGGATGGTaGAGGATGAGGAACCTGATC +
Preference number: 4 (lower is better)
Translates to: VKDEEPDQISRVIRYQEKSPDGW*RMRNLI
Trigger: GATCAGGTTCCTCATCCTTCACCATCCATCAGGTGA...CTTCTCTTGATACCTGATCACCCTTGATATCTGATCAGGTTCCTCATCCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680004.1
ENST00000681054.1
ENST00000681523.1
CDS-3UTR TCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCTGGATGGACTCAAGGTaGTCCCCATGGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFWMDSR*SPWGLF
Trigger: GAAGAGGCCCCATGGGGATCACCTTGAGTCCATCCA...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR GCA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCATTCACTGACTTTTATTaGCAGAGGAGCTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPFTDFY*QRSSQE
Trigger: TTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAA...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR GCA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGCCATCATCATCTCTTaGCTAATTTCTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HWWNELFNKTAANLVVETAIIIS*LISFSS
Trigger: GCTGGAGAAAGAAATTAGGCAAGAGATGATGATGGC...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR GCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTAACAGTTGCCTTGTATaGCTTATCAATTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PDPQQELRSSGSVDPAICNSCLV*LINSQN
Trigger: GTTCTGAGAATTGATAAGGCATACAAGGCAACTGTT...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GAAGGGAGAATGAATAAGGCTGGGATTCCTTGGTGTTCTTACCATCACGGTCCTGTCCGTGGTGGAGGATaGTCAAAGATAAAGATGCTA +
Preference number: 4 (lower is better)
Translates to: EGRMNKAGIPWCSYHHGPVRGGG*SKIKML
Trigger: TAGCATCTTTATCTTTGAGCATCCTCCACCACGGAC...AGGACCGTGATGGTAAGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCTCGTTAAATAGCTCCTaGTCCACGGCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFSLNSS*STAWAS
Trigger: GGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGA...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGAATCCCCAACTCCTTaGCCCATAGTAGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLESPTP*PIVDSQ
Trigger: TTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTC...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp CCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCAAACCTTTGTGGAGGATaGACTTCTCCACAAAGCATC +
Preference number: 4 (lower is better)
Translates to: PISLHLCYHLLPHFGPSSNLCGG*TSPQSI
Trigger: GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTT...TGATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTCTTCCCTGGTTTCCCTaGGGCCTGAACAGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLLPWFP*GLNSCL
Trigger: AAGGCAACTGTTCAGGCCCCAGGGAAACCAGGGAAG...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTCGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLRNGFS*KNRDFG
Trigger: ACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCG...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp TCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTCGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SQARLGVPLNQDLCLMRLRNGFS*KNRDFG
Trigger: ACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCG...AAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp GCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGCGTCTTTTTATCACCATACCGGCAAATTaGGCTCCGCAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ARLGVPLNQDLCLMRLFITIPAN*APQWFL
Trigger: GAGAAACCATTGCGGAGCCCAATTTGCCGGTATGGT...GATAAAAAGACGCATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp ATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTATGGTTAGGTCCCAGTTTCTATaGCAACCATACCGGCAAATT +
Preference number: 4 (lower is better)
Translates to: MVSPGKTVILVPADVSMVRSQFL*QPYRQI
Trigger: AATTTGCCGGTATGGTTGCCATAGAAACTGGGACCT...AACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS-3UTR CCA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCATTCACAAACCACTGGTaGAATGAGCTCTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: VDSIWAGPISFLFHSESPFTNHW*NELFNK
Trigger: CTTGTTGAAGAGCTCATTCCACCAGTGGTTTGTGAA...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CCA 90 bp GGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGGAGCAGCAATTCACAAACCACTGGTaGAATGAGCTCTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: GIEIFRFRGSCHLLREQQFTNHW*NELFNK
Trigger: CTTGTTGAAGAGCTCATTCCACCAGTGGTTTGTGAA...TTGCTGCTCCCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCGAGTTCACAAACCACTaGTGGAATGAGCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIEFTNH*WNELFN
Trigger: GTTGAAGAGCTCATTCCACCAGTGGTTTGTGAACTC...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCGGCCGGAAGGAGAATaGTATCACTCAGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSLKVRQSSIFRLLHMLLRPEGE*YHSGSQ
Trigger: CTGAGAGCCTGAGTGATACCATTCTCCTTCCGGCCG...GAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTAGGGAAAAAGAGATATaGGCTCTCTACCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PDPQQELRSSGSVDPAICREKEI*ALYQKN
Trigger: ATTCTTTTGGTAGAGAGCCCATATCTCTTTTTCCCT...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGTGGATAATGAAGAAGTaGTGGTTGGGAGGACTAGGG +
Preference number: 4 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVWIMKK*WLGGLG
Trigger: CCCTAGTCCTCCCAACCACCACTTCTTCATTATCCA...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp GTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTAGAACTGATGGCTGTTTaGGCACTTTCTACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VMANRTGTQDFRPPLSTVELMAV*ALSTFF
Trigger: GAAGAAAGTAGAAAGTGCCCAAACAGCCATCAGTTC...TACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp ATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAAAAAATTAGCCAGGTATaGTGTGCCACTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: MTMGFCSGGEREIGLNSQKISQV*CATPVA
Trigger: GGCCACAGGAGTGGCACACCATACCTGGCTAATTTT...TTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp GCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCTGTTTCTTTTCTTTaGAGGTACGACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVAYLDCPDPQQELRSSGSVSFL*RYDSLP
Trigger: TGGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGA...ACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCATTGTTTGACCTAGGATaGCACAATCCAGATTTATCG +
Preference number: 4 (lower is better)
Translates to: VDSIWAGPISFLFHSESPLFDLG*HNPDLS
Trigger: CGATAAATCTGGATTGTGTCATCCTAGGTCAAACAA...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTACCCTCAGCAGGAATTaGGATCTTCAGGTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLTLSRN*DLQVPW
Trigger: CCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGT...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp AAAACCTTACAAGATTCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGGGTGAGAGGATTGCTTaGGTCCAGGAGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KTLQDSCQRQAEVIRYHLGERIA*VQEIEA
Trigger: AGCCTCAATCTCCTGGACTCAAGCAATCCTCTCACC...CAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGAATCTTGTAAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp GCTAAGCTCTTGTTCGAAGGGAGAATGAATAAGGCTGGGATTCCTTGGTGTTCTTGTTCGAAGGGAGAATaGATAAGGCTGGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: AKLLFEGRMNKAGIPWCSCSKGE*IRLGFL
Trigger: AAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACA...AGAACACCAAGGAATCCCAGCCTTATTCATTCTCCCTTCGAACAAGAGCTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR GCA 90 bp ACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCAACAGTTGCCTTGTATaGCTTATCAATTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TGTQDFRPPLSTVPIGGSNSCLV*LINSQN
Trigger: GTTCTGAGAATTGATAAGGCATACAAGGCAACTGTT...GCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATTGGGGCCTGAACAGTTaGCTTGTATGCCTTATCAAT +
Preference number: 4 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYWGLNS*LVCLIN
Trigger: ATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCA...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCAGGGTCTTGCTATACTaGCCAGGCTGGACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: FSLKVRQSSIFRLLHMLLRVLLY*PGWTQA
Trigger: TGCTTGAGTCCAGCCTGGGCAGTATAGCAAGACCCT...GAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp TTTCCCTGGGGCCTGAACAGTTGCCTTGTATGCCTTATCAATTCTCAGAACTTTTTTTGGGGTAATAGATaGTTGGCTCGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FPWGLNSCLVCLINSQNFFWGNR*LARSPW
Trigger: CCAAGGGCTACGAGCCAACCATCTATTACCCCAAAA...AAAGTTCTGAGAATTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAGGGAAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATGAGTTCACAAACCACTaGTGGAATGAGCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYEFTNH*WNELFN
Trigger: GTTGAAGAGCTCATTCCACCAGTGGTTTGTGAACTC...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGAGCCTCCCATGTAGCTaGGACTACAGGTGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMSLPCS*DYRCVP
Trigger: TGGCACACACCTGTAGTCCCAGCTACATGGGAGGCT...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CCA 90 bp ATGGTTTCTCCTGGAAAAACCGTGATTTTGGTTCCCGCGGACGTCTCTATGGTTAATGGGATTTTGCAGTaGGGGAGAAAGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: MVSPGKTVILVPADVSMVNGILQ*GRKRNW
Trigger: CCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATT...AACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR TCA 90 bp TTCCTCTATCACAGGCAACACTTCCATCATAATTGCCTATGTAGATTCCATCTGTGGCGTAGGCAGTCATaGTATGTCACCCATTCACTG +
Preference number: 4 (lower is better)
Translates to: FLYHRQHFHHNCLCRFHLWRRQS*YVTHSL
Trigger: CAGTGAATGGGTGACATATCATGACTGCCTACGCCA...CAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCAATCGTCATGGGCTCTaGGGGCATTTCCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFNRHGL*GHFPKE
Trigger: TTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATT...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGAACAGTTGCCTTGTATaGCTTATCAATTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWNSCLV*LINSQN
Trigger: GTTCTGAGAATTGATAAGGCATACAAGGCAACTGTT...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGATGGATGGTGAAGGACGCAATGGTTTCTCCTaGAAAAACCGTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SCQRQAEVIRYHLMDGEGRNGFS*KNRDFG
Trigger: ACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCG...TCCTTCACCATCCATCAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR CCA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAGGGAGAAAGAGAAATTaGGCTCAACTCTCAATACAG +
Preference number: 4 (lower is better)
Translates to: VIGIGTMTMGFCSGGEREGRKRN*AQLSIQ
Trigger: CTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCC...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
3UTR CAA 72 bp AAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTaGCTGTATCAGAAGTTTGTGAAGGTATTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KETTRYNHPKPN*LYQKFVKVLEA
Trigger: AGCCTCTAATACCTTCACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp CAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTATGAAGGCTGAGTATTCATaGGTATTCAACCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QVSQARLGVPLNQDLCLMKAEYS*VFNPEK
Trigger: TTTTTCAGGGTTGAATACTCATGAATACTCAGCCTT...CATAAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR TCA 90 bp CCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGAAGCTAACATGTGCTTTATTCTTTTTATaGGAGAGGGTCTTGCTATAC +
Preference number: 4 (lower is better)
Translates to: PGLQASTFYCTNRRKLTCALFFL*ERVLLY
Trigger: GTATAGCAAGACCCTCTCTCATAAAAAGAATAAAGC...ACATGTTAGCTTCCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR GCA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGGTTGCTTACTTAGACTaGCCAGACCCTCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMVAYLD*PDPQQE
Trigger: TTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAAC...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCTCCTGTGACCAGCCTTaGTGTTGCTTACTTAGACTG +
Preference number: 4 (lower is better)
Translates to: FSLKVRQSSIFRLLHMLLSCDQP*CCLLRL
Trigger: CAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGA...GAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATAACTATGACAATGGGATTTTaGAGTGGGGGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGEREIGLNSQYSMGSITMTMGF*SGGERE
Trigger: TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT...AGTTATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTGAATCCCCAACTCCTTaGCCCATAGTAGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLESPTP*PIVDSQ
Trigger: TTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTC...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AAAACCTTACAAGATTCTTGCCAAAGACAGGCTGAGGTAATCAGATATCACCTGAATTGGGCTCCGCAATaGTTTCTCCTGGAAAAACCG +
Preference number: 4 (lower is better)
Translates to: KTLQDSCQRQAEVIRYHLNWAPQ*FLLEKP
Trigger: CGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATT...CAGGTGATATCTGATTACCTCAGCCTGTCTTTGGCAAGAATCTTGTAAGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR CCA 90 bp AGTATTCATGAGTATTCAACCCTGAAAAATCAGGACACAGCTATCACCTACTCTCTTAAGGCCAGGGATTaGAGACCAGCCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: SIHEYSTLKNQDTAITYSLKARD*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCCAATCCCTGGCCTTAAG...AGAGTAGGTGATAGCTGTGTCCTGATTTTTCAGGGTTGAATACTCATGAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CCA 90 bp ATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAAGGGAGAAAGAGAAATTaGGCTCAACTCTCAATACAG +
Preference number: 4 (lower is better)
Translates to: MTMGFCSGGEREIGLNSQGRKRN*AQLSIQ
Trigger: CTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCC...TTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CCA 90 bp AGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATAAATGGGATTTTGCAGTaGGGGAGAAAGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: SGGEREIGLNSQYSMGSINGILQ*GRKRNW
Trigger: CCAATTTCTCTTTCTCCCCCACTGCAAAATCCCATT...TATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR TCA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGATTCTTATTCCACTCTaGATCCCCAACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMILIPL*IPNSLA
Trigger: GGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAAT...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGCACTTCCATCATAATTaGCTATGTAGATTCCATCTG +
Preference number: 4 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVHFHHN*LCRFHL
Trigger: CAGATGGAATCTACATAGGCAATTATGATGGAAGTG...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCTCCTGTGACCAGCCTTaGTGTTGCTTACTTAGACTG +
Preference number: 4 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFSCDQP*CCLLRL
Trigger: CAGTCTAAGTAAGCAACAGCAAGGCTGGTCACAGGA...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGGTCATTATGTGCTAAGGGCTATACATGTTACCTAGCAAATCTTTCCCATTTCGAATCCCCAACTCCTTaGCCCATAGTAGACTCTCAA +
Preference number: 4 (lower is better)
Translates to: WSLCAKGYTCYLANLSHFESPTP*PIVDSQ
Trigger: TTGAGAGTCTACTATGGGCCAAGGAGTTGGGGATTC...GAAATGGGAAAGATTTGCTAGGTAACATGTATAGCCCTTAGCACATAATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp AAGTTTGTGAAGGTATTAGAGGCTGTGGGTAACAGAGTCCATCCTTTTTCTCTTAGATTCCATCTGGGCTaGGCCCATCTCATTCTTATT +
Preference number: 4 (lower is better)
Translates to: KFVKVLEAVGNRVHPFSLRFHLG*AHLILI
Trigger: AATAAGAATGAGATGGGCCCAGCCCAGATGGAATCT...AAGAGAAAAAGGATGGACTCTGTTACCCACAGCCTCTAATACCTTCACAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TTCCTCTATCACAGGCAACACTTCCATCATAATTGCCTATGTAGATTCCATCTGAGATTCCATCTGGGCTaGGCCCATCTCATTCTTATT +
Preference number: 4 (lower is better)
Translates to: FLYHRQHFHHNCLCRFHLRFHLG*AHLILI
Trigger: AATAAGAATGAGATGGGCCCAGCCCAGATGGAATCT...CAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CCA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTTACTGTCAGTCACTaGCACTTGTCCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMFTVSH*HLSTVK
Trigger: CTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAA...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR GCA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGGCCATCATCATCTCTTaGCTAATTTCTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMAIIIS*LISFSS
Trigger: GCTGGAGAAAGAAATTAGGCAAGAGATGATGATGGC...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGTTTGACCTAGGATaGCACAATCCAGATTTATCG +
Preference number: 4 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMLFDLG*HNPDLS
Trigger: CGATAAATCTGGATTGTGTCATCCTAGGTCAAACAA...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR TCA 90 bp AGTATTCATGAGTATTCAACCCTGAAAAATCAGGACACAGCTATCACCTACTCTTGTTCCTGTGAAGGCTaGGTATTCATGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: SIHEYSTLKNQDTAITYSCSCEG*VFMSIQ
Trigger: TTGAATACTCATGAATACTCAGCCTTCACAGGAACA...AGAGTAGGTGATAGCTGTGTCCTGATTTTTCAGGGTTGAATACTCATGAATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS CCA 90 bp TGGCCCAGCTGTCTCTCCCACCCCTTTGTGCCTAGGCCAGGGGGCTaGGACAGTGACTCCTCCCTGGCTGCTCCCAAAGGTCGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: WPSCLSHPFVPRPGG*DSDSSLAAPKGREL
Trigger: CAACTCTCGACCTTTGGGAGCAGCCAGGGAGGAGTCACTGTCCCAGCCCCCTGGCCTAGGCACAAAGGGGTGGGAGAGACAGCTGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679913.1
ENST00000680529.1
CDS-3UTR CAA 90 bp CTCCACGTACCCTTGGGCCGTGGTCTCTTCATGGGGCCAACATGTAAAGGGGACGCGATGGTCTGGCTTTaGATCCGCGGCACGCGCGAG +
Preference number: 5 (lower is better)
Translates to: LHVPLGRGLFMGPTCKGDAMVWL*IRGTRE
Trigger: CTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCGC...GTCCCCTTTACATGTTGGCCCCATGAAGAGACCACGGCCCAAGGGTACGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS-3UTR CAA 90 bp CTCAGTTCCCACCTGAGGAACTCTCGTCCAACGAGCTCCACGTACCCTTGGGCCGAGCTCCACGTACCCTaGGGCCGTGGTCTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LSSHLRNSRPTSSTYPWAELHVP*GRGLFM
Trigger: CATGAAGAGACCACGGCCCAAGGGTACGTGGAGCTC...GGCCCAAGGGTACGTGGAGCTCGTTGGACGAGAGTTCCTCAGGTGGGAACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368233.3
CDS TCA 90 bp TTCTCGGTGCCTGCCTGCCTGCCCACCACTGGGGAGGCTACAGGCTaGGATAGCCTGAGACGAGTCAGGAGAGCCAGATTCTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: FSVPACLPTTGEATG*DSLRRVRRARFWFQ
Trigger: CTGAAACCAGAATCTGGCTCTCCTGACTCGTCTCAGGCTATCTCAGCCTGTAGCCTCCCCAGTGGTGGGCAGGCAGGCAGGCACCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS GCA 90 bp CTGTTTCAGGGCTGCCCGTCTTGGGATCACAATGAAGGCCAAGCTTaGTCGCCTAGAGGCCCAGGAGCAGGCCTTCCTGGCTCGTCTCAA +
Preference number: 5 (lower is better)
Translates to: LFQGCPSWDHNEGQA*SPRGPGAGLPGSSQ
Trigger: TTGAGACGAGCCAGGAAGGCCTGCTCCTGGGCCTCTAGGCGAGCAAGCTTGGCCTTCATTGTGATCCCAAGACGGGCAGCCCTGAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 90 bp CCAGCAGCAGCAGCCCATCTCCTATCCAAGTTCGAGTATGCAGGATaGCACACCTCCCTGTGGCTCCTCAAGGAGCAATGGTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PAAAAHLLSKFEYAG*HTSLWLLKEQWWGL
Trigger: CAGCCCCCACCATTGCTCCTTGAGGAGCCACAGGGAGGTGTGCCATCCTGCATACTCGAACTTGGATAGGAGATGGGCTGCTGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 90 bp GATGGCACACCTCCCTGTGGCTCCTCAAGGAGCAATGGTGGGGGCTaGCAAACCACTGCCTGGAGCTATAAATTCTTAGGGGGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: DGTPPCGSSRSNGGG*QTTAWSYKFLGGFH
Trigger: GTGGAAGCCCCCTAAGAATTTATAGCTCCAGGCAGTGGTTTGCCAGCCCCCACCATTGCTCCTTGAGGAGCCACAGGGAGGTGTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 90 bp CATCTCCTATCCAAGTTCGAGTATGCAGGATGGCACACCTCCCTGTaGCTCCTCAAGGAGCAATGGTGGGGGCTGGCAAACCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: HLLSKFEYAGWHTSL*LLKEQWWGLANHCL
Trigger: CAGGCAGTGGTTTGCCAGCCCCCACCATTGCTCCTTGAGGAGCCACAGGGAGGTGTGCCATCCTGCATACTCGAACTTGGATAGGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS-3UTR CAA 90 bp GATAAAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCAGCGATGGTCTGGCTTTaGATCCGCGGCACGCGCGAG +
Preference number: 5 (lower is better)
Translates to: DKDATAEPSKLWGHPSDSAMVWL*IRGTRE
Trigger: CTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCGC...TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS GCA 90 bp TCATGGGCTGTGGTGGAGCAGGAAAAGGATGTCAGAGCCAGCAGCTaGACAAACAGCCTTAACTGGAGAGGGCTGTCCTCTGCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SWAVVEQEKDVRASS*TNSLNWRGLSSAPA
Trigger: TGCAGGTGCAGAGGACAGCCCTCTCCAGTTAAGGCTGTTTGTGCAGCTGCTGGCTCTGACATCCTTTTCCTGCTCCACCACAGCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467374.2
ENST00000488840.1
ENST00000681825.1
ENST00000681922.1
CDS-3UTR CAA 90 bp TGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCAACTCCTTGGCCCTCCCCACCCCAACCTTaGTGGAGGATGGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: WAGPISFLFHSESPTPWPSPPQP*WRMDFS
Trigger: GGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGA...GGGCCAAGGAGTTGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATTCCCCACCCCAACCTTaGTGGAGGATGGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: LPRPSAGIEIFRFRGSCHSPPQP*WRMDFS
Trigger: GGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGA...ATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CTCAATGCTTCCCTGGAGTTTTCCTTCCTCGTATTTGCGCCCGGGACTAGCTCAAGATGGGAGGATCACTaGAGCCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LNASLEFSFLVFAPGTSSRWEDH*SPGGGG
Trigger: ACCTCCGCCTCCTGGGCTCAAGTGATCCTCCCATCT...TGAGCTAGTCCCGGGCGCAAATACGAGGAAGGAAAACTCCAGGGAAGCATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS GCA 90 bp ATAGGGCAGCCACTCCGGCCCCTGAGGGGTAGATCATGTGTTTACTaGATGCTAGGGCAAGAGGATCTGACTACAGAGTGGAAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: IGQPLRPLRGRSCVY*MLGQEDLTTEWKEG
Trigger: TCCCTCCTTCCACTCTGTAGTCAGATCCTCTTGCCCTAGCATGCAGTAAACACATGATCTACCCCTCAGGGGCCGGAGTGGCTGCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS-3UTR CAA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCAGCGATGGTCTGGCTTTaGATCCGCGGCACGCGCGAG +
Preference number: 5 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPAMVWL*IRGTRE
Trigger: CTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCGC...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS GCA 90 bp TCACTGATTCAGGCCAAATTGAGACCAGACAGTTTTTGTTCTCGGTaGCTGCCTGCCTGCCCACCACTGGGGAGGCTACAGGCTGAGATA +
Preference number: 5 (lower is better)
Translates to: SLIQAKLRPDSFCSR*LPACPPLGRLQAEI
Trigger: TATCTCAGCCTGTAGCCTCCCCAGTGGTGGGCAGGCAGGCAGGCACCGAGAACAAAAACTGTCTGGTCTCAATTTGGCCTGAATCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CCA 90 bp GAAACACGAAGGAAGAGCAGAGCACAGGCAGTGGTTACTGTAGGATaGAGGTATTCAACTGGAGCCACCTACCTCTGCGGGCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: ETRRKSRAQAVVTVG*RYSTGATYLCGHFP
Trigger: GGGGAAATGCCCGCAGAGGTAGGTGGCTCCAGTTGAATACCTCCATCCTACAGTAACCACTGCCTGTGCTCTGCTCTTCCTTCGTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS-3UTR CAA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGGCGATGGTCTGGCTTTaGATCCGCGGCACGCGCGAG +
Preference number: 5 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVAMVWL*IRGTRE
Trigger: CTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCGC...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAGCGATGGTCTGGCTTTaGATCCGCGGCACGCGCGAG +
Preference number: 5 (lower is better)
Translates to: VIGIGTMTMGFCSGGEREAMVWL*IRGTRE
Trigger: CTCGCGCGTGCCGCGGATCAAAAGCCAGACCATCGC...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS-3UTR CAA 90 bp CCACTGGCATGTCCTCCATCTAATCCCACTCAAGGTCCCAAGTTTCCCAGGCTATTTCCTTCCTCGTATTaGCGCCCGGGACTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PLACPPSNPTQGPKFPRLFPSSY*RPGLAQ
Trigger: CTGAGCTAGTCCCGGGCGCAAATACGAGGAAGGAAA...TAGCCTGGGAAACTTGGGACCTTGAGTGGGATTAGATGGAGGACATGCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTAGATGGGAGGATCACTaGAGCCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLRWEDH*SPGGGG
Trigger: ACCTCCGCCTCCTGGGCTCAAGTGATCCTCCCATCT...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTGGCATGTCTGTAATCCCAACACTTaGGGAAGCCGAGGTGTGCAT +
Preference number: 5 (lower is better)
Translates to: EPPRLTHPVSFSKSHWHVCNPNT*GSRGVH
Trigger: ATGCACACCTCGGCTTCCCAAAGTGTTGGGATTACA...GACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS TCA 90 bp GGGCAAGAGGATCTGACTACAGAGTGGAAGGAGGGACCAGGGAGATaGAAGGGCAAGGAAGCTTTAGAGAAGGTGGTGTGTGGGACTCAT +
Preference number: 5 (lower is better)
Translates to: GQEDLTTEWKEGPGR*KGKEALEKVVCGTH
Trigger: ATGAGTCCCACACACCACCTTCTCTAAAGCTTCCTTGCCCTTTCATCTCCCTGGTCCCTCCTTCCACTCTGTAGTCAGATCCTCTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CCA 90 bp ACTCAGGTGCCTAGAGAAGCCAGGCAGCTAAAGGACAAGGAATGCTaGGGGCTGTGGGAACAGGAATGCAGATACCCTTTGAAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: TQVPREARQLKDKEC*GLWEQECRYPLKEH
Trigger: ATGCTCCTTCAAAGGGTATCTGCATTCCTGTTCCCACAGCCCCCAGCATTCCTTGTCCTTTAGCTGCCTGGCTTCTCTAGGCACCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679649.1
ENST00000680529.1
ENST00000681645.1
CDS-3UTR CAA 90 bp CGGAACCTCCGAAAATGGGCACGCTCCAGGTCCCAGTTTCTATGGCAACCATACAACCATACCGGCAAATaGGGCTCCGCAATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RNLRKWARSRSQFLWQPYNHTGK*GSAMVS
Trigger: AGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTT...GTATGGTTGCCATAGAAACTGGGACCTGGAGCGTGCCCATTTTCGGAGGTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680269.1
CDS TCA 90 bp ATACCGGCAAATTGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTaGTTTTGGTTCCCGCGGACGTCTCTATGGTTTCGACAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: IPANWAPQWFLLEKP*FWFPRTSLWFRQPE
Trigger: CTCAGGCTGTCGAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCCGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680661.1
CDS TCA 90 bp GGAATAGGGATGGTGATGGTGTTGAGAAGGCCTTATCTACCCCCATaGCCCCTCCTAGATGGCTACATTGACTTCAGGTGGAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GIGMVMVLRRPYLPP*PLLDGYIDFRWREA
Trigger: GGCTTCTCTCCACCTGAAGTCAATGTAGCCATCTAGGAGGGGTCATGGGGGTAGATAAGGCCTTCTCAACACCATCACCATCCCTATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS-3UTR CAA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCTCCATCTTCAGGTTATaGCACATGTTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTSIFRL*HMLLPL
Trigger: CAGAGGGAGCAACATGTGCAATAACCTGAAGATGGA...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCATCCCCACCCCAACCTTaGTGGAGGATGGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PISLHLCYHLLPHFGPSSSPPQP*WRMDFS
Trigger: GGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGA...TGATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CTGCCCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCATCCCAAGCCCAACTaGCTGTATCAGAAGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LPRPSAGIEIFRFRGSCHHPKPN*LYQKFV
Trigger: CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATG...ATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCGGCAGGTATGAGCTCTaGATAGATGGGCACATGAAA +
Preference number: 5 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTGRYEL*IDGHMK
Trigger: TTTCATGTGCCCATCTATCAAGAGCTCATACCTGCC...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS CCA 90 bp ACCAGGGAGATGAAAGGGCAAGGAAGCTTTAGAGAAGGTGGTGTGTaGGACTCATGGAGCACACTTTATGAAGGAGGAGAAGGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: TREMKGQGSFREGGV*DSWSTLYEGGEGSC
Trigger: GCAAGAGCCTTCTCCTCCTTCATAAAGTGTGCTCCATGAGTCCCACACACCACCTTCTCTAAAGCTTCCTTGCCCTTTCATCTCCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS-3UTR CAA 90 bp TCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTCCCAGGAATCCAACCCAATCCCCAGGGTaGGTCTCTGACTTCCACCAT +
Preference number: 5 (lower is better)
Translates to: SDFHHSLTFIARGAPRNPTQSPG*VSDFHH
Trigger: ATGGTGGAAGTCAGAGACCAACCCTGGGGATTGGGT...TGGATTCCTGGGAGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS-3UTR CAA 90 bp GTGGAGCGGGGCATCTTTACTGTCAGTCACTGGCACTTGTCCACTGTGAAGACCTCTCTGAAGTCTGAGTaGAGTACCCTTCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: VERGIFTVSHWHLSTVKTSLKSE*STLPLS
Trigger: TGATAGAGGAAGGGTACTCAACTCAGACTTCAGAGA...GGTCTTCACAGTGGACAAGTGCCAGTGACTGACAGTAAAGATGCCCCGCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTTGGACCATCCCTGCTTaGCAGATGTGGCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: HWWNELFNKTAANLVVETWTIPA*QMWLKG
Trigger: CCCTTTTAGCCACATCTGCAAAGCAGGGATGGTCCA...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTTAAGGCTGGGGCCTGAACAGTaGCCTTGTATGCCTTATCAA +
Preference number: 5 (lower is better)
Translates to: PSAGIEIFRFRGSCHLLRLGPEQ*PCMPYQ
Trigger: TTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAG...CCTTAACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GAGCCACCGCGTCTCACCCATCCTGTATCTTTCTCCAAGTCCCACTGGCATGTCTGCTTGATGAACCTATaGAGATGTCTAGTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: EPPRLTHPVSFSKSHWHVCLMNL*RCLVSR
Trigger: CCTAGAGACTAGACATCTCAATAGGTTCATCAAGCA...GACATGCCAGTGGGACTTGGAGAAAGATACAGGATGGGTGAGACGCGGTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCAGTGATTCTTCTACCTaGGCCTTCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEISDSST*AFQSAG
Trigger: CCCAGCACTTTGGAAGGCCAAGGTAGAAGAATCACT...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CAA 90 bp GATAAAGATGCTACAGCAGAGCCCTCAAAGCTCTGGGGGCATCCTTCAGACTCACTACTCCCACTGGTGTaGGTGTTTTCTATACTGCCC +
Preference number: 5 (lower is better)
Translates to: DKDATAEPSKLWGHPSDSLLPLV*VFSILP
Trigger: GGGCAGTATAGAAAACACCAACACCAGTGGGAGTAG...TGAGTCTGAAGGATGCCCCCAGAGCTTTGAGGGCTCTGCTGTAGCATCTTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS-3UTR CAA 90 bp TGGCTCAGGTCCTGTGCATGTTTAGGGGATCACCAGGTGTCCGTGGTGGAGGATTGTTCAGCTAAGCTCTaGTTCGAAGGGAGAATGAAT +
Preference number: 5 (lower is better)
Translates to: WLRSCACLGDHQVSVVEDCSAKL*FEGRMN
Trigger: ATTCATTCTCCCTTCGAACAAGAGCTTAGCTGAACA...ATCCTCCACCACGGACACCTGGTGATCCCCTAAACATGCACAGGACCTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679702.1
CDS GCA 90 bp GTGTGGGACTCATGGAGCACACTTTATGAAGGAGGAGAAGGCTCTTaGACACTTATTCGAATACCATCCGTTAGGCACCTTCCGTACCAG +
Preference number: 5 (lower is better)
Translates to: VWDSWSTLYEGGEGS*TLIRIPSVRHLPYQ
Trigger: CTGGTACGGAAGGTGCCTAACGGATGGTATTCGAATAAGTGTGCAAGAGCCTTCTCCTCCTTCATAAAGTGTGCTCCATGAGTCCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS-3UTR CAA 90 bp GTAGATTCCATCTGGGCTGGGCCCATCTCATTCTTATTCCACTCTGAATCCCCATGTTGCTCCCTCTGCTaGGGACATTCTTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: VDSIWAGPISFLFHSESPCCSLC*GHSSPF
Trigger: AAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAACA...TGGGGATTCAGAGTGGAATAAGAATGAGATGGGCCCAGCCCAGATGGAATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTTGTTGCTCCCTCTGCTaGGGACATTCTTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: HWWNELFNKTAANLVVETCCSLC*GHSSPF
Trigger: AAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAACA...AGTTTCCACTACCAAGTTGGCCGCAGTCTTGTTGAAGAGCTCATTCCACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GGGCCTGGGACCTGTGGCGTAGGCAGTCATGATATGTCACCCATTCACTGGTACATCTGTTTCTTTTCTTaGAAGGTACGACAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GPGTCGVGSHDMSPIHWYICFFS*KVRQSS
Trigger: GGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGAT...GTACCAGTGAATGGGTGACATATCATGACTGCCTACGCCACAGGTCCCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CCAGACCCTCAGCAGGAATTGAGATCTTCAGGTTCCGTGGATCCTGCCATCTGTGGCCATCATCATCTCTaGCCTAATTTCTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PDPQQELRSSGSVDPAICGHHHL*PNFFLQ
Trigger: CTGGAGAAAGAAATTAGGCAAGAGATGATGATGGCC...ACAGATGGCAGGATCCACGGAACCTGAAGATCTCAATTCCTGCTGAGGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTACCAATAGGAGGGGCCATCATCATCTCTaGCCTAATTTCTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QDWNPGLQASTFYCTNRRGHHHL*PNFFLQ
Trigger: CTGGAGAAAGAAATTAGGCAAGAGATGATGATGGCC...CCTCCTATTGGTACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp TCCCATTTCTCTACATCTCTGTTACCATCTACTACCCCACTTCGGGCCATCATCTGGACCATCCCTGCTTaGCAGATGTGGCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SHFSTSLLPSTTPLRAIIWTIPA*QMWLKG
Trigger: CCCTTTTAGCCACATCTGCAAAGCAGGGATGGTCCA...GATGATGGCCCGAAGTGGGGTAGTAGATGGTAACAGAGATGTAGAGAAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGGAATTGAGATCCATCCCAAGCCCAACTaGCTGTATCAGAAGTTTGTG +
Preference number: 5 (lower is better)
Translates to: QPCCCLLRLPRPSAGIEIHPKPN*LYQKFV
Trigger: CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATG...GATCTCAATTCCTGCTGAGGGTCTGGGCAGTCTAAGTAAGCAACAGCAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp TCCCAAGTTTCCCAGGCTAGACTGGGTGTTCCCCTAAATCAAGACCTGTGTCTTAACCATACCGGCAAATaGGGCTCCGCAATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SQVSQARLGVPLNQDLCLNHTGK*GSAMVS
Trigger: AGAAACCATTGCGGAGCCCAATTTGCCGGTATGGTT...AAGACACAGGTCTTGATTTAGGGGAACACCCAGTCTAGCCTGGGAAACTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp CAAAGGGACAAGTTCTGGCACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCTTTCCTTCCTCGTATTaGCGCCCGGGACTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: QRDKFWHTMVSQKVFDEAFPSSY*RPGLAQ
Trigger: CTGAGCTAGTCCCGGGCGCAAATACGAGGAAGGAAA...GGCCTCATCAAACACTTTTTGACTCACCATTGTGTGCCAGAACTTGTCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp AGTCTCACTCCCCACCCCAACCTTTGTGGAGGATGGACTTCTCCACAAAGCATCGGAACTGATGGCTGTTaGGGCACTTTCTACTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLTPHPNLCGGWTSPQSIGTDGC*GTFYFL
Trigger: AAGAAAGTAGAAAGTGCCCAAACAGCCATCAGTTCC...GATGCTTTGTGGAGAAGTCCATCCTCCACAAAGGTTGGGGTGGGGAGTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CAA 90 bp GTGATAGGTATAGGGACCATGACAATGGGATTTTGCAGTGGGGGAGAAAGAGAAACTCCAGCCGGCAAATaGGGCTCCGCAATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: VIGIGTMTMGFCSGGERETPAGK*GSAMVS
Trigger: AGAAACCATTGCGGAGCCCAATTTGCCGGCTGGAGT...TTCTCTTTCTCCCCCACTGCAAAATCCCATTGTCATGGTCCCTATACCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR CAA 90 bp CCAGGGTTGGTCTCTGACTTCCACCATTCACTGACTTTTATTGCCAGAGGAGCTTACCATAGCAACCTCTaGCCCTTTGTGTTACCCCTA +
Preference number: 5 (lower is better)
Translates to: PGLVSDFHHSLTFIARGAYHSNL*PFVLPL
Trigger: TAGGGGTAACACAAAGGGCAAGAGGTTGCTATGGTA...AGCTCCTCTGGCAATAAAAGTCAGTGAATGGTGGAAGTCAGAGACCAACCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368235.8
CDS CCA 90 bp GTGTCTCATTCAGAGGGCAGCCTGAGGCCTAGAGAAAGTGTGAGTTaGTCACTGATTCAGGCCAAATTGAGACCAGACAGTTTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: VSHSEGSLRPRESVS*SLIQAKLRPDSFCS
Trigger: AGAACAAAAACTGTCTGGTCTCAATTTGGCCTGAATCAGTGACCAACTCACACTTTCTCTAGGCCTCAGGCTGCCCTCTGAATGAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS-3UTR CAA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGTCTCTGAAGTCTGAGTaGAGTACCCTTCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWSLKSE*STLPLS
Trigger: TGATAGAGGAAGGGTACTCAACTCAGACTTCAGAGA...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTGGGGCCATCATCATCTCTaGCCTAATTTCTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GTTVFHLQVIAHVAPSAWGHHHL*PNFFLQ
Trigger: CTGGAGAAAGAAATTAGGCAAGAGATGATGATGGCC...CCAAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGCTGGGGCCTGAACAGTaGCCTTGTATGCCTTATCAA +
Preference number: 5 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVLGPEQ*PCMPYQ
Trigger: TTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAG...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp CACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCGGTCACGGTGGCTTACGCTGCTTGATGAACCTATaGAGATGTCTAGTCTCTAGG +
Preference number: 5 (lower is better)
Translates to: HTMVSQKVFDEAGHGGLRCLMNL*RCLVSR
Trigger: CCTAGAGACTAGACATCTCAATAGGTTCATCAAGCA...GCGTAAGCCACCGTGACCGGCCTCATCAAACACTTTTTGACTCACCATTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp CAAAGGGACAAGTTCTGGCACACAATGGTGAGTCAAAAAGTGTTTGATGAGGCCTGTAATCCCAACACTTaGGGAAGCCGAGGTGTGCAT +
Preference number: 5 (lower is better)
Translates to: QRDKFWHTMVSQKVFDEACNPNT*GSRGVH
Trigger: ATGCACACCTCGGCTTCCCAAAGTGTTGGGATTACA...GGCCTCATCAAACACTTTTTGACTCACCATTGTGTGCCAGAACTTGTCCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS TCA 90 bp AAGAGATGTCTTCAGATGGCAAGAGAAAGGGCTAAATCTAATGCTTaGCTGGGGGCTTCTTGGGGGTGGGTGGAACTGTGTTGTACTAAT +
Preference number: 5 (lower is better)
Translates to: KRCLQMARERAKSNA*LGASWGWVELCCTN
Trigger: ATTAGTACAACACAGTTCCACCCACCCCCAAGAAGCCCCCAGTCAAGCATTAGATTTAGCCCTTTCTCTTGCCATCTGAAGACATCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 90 bp GATGTCTTCAGATGGCAAGAGAAAGGGCTAAATCTAATGCTTGACTaGGGGCTTCTTGGGGGTGGGTGGAACTGTGTTGTACTAATCTTT +
Preference number: 5 (lower is better)
Translates to: DVFRWQEKGLNLMLD*GLLGGGWNCVVLIF
Trigger: AAAGATTAGTACAACACAGTTCCACCCACCCCCAAGAAGCCCCCAGTCAAGCATTAGATTTAGCCCTTTCTCTTGCCATCTGAAGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS-3UTR CAA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATTCCATCTTCAGGTTATaGCACATGTTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYSIFRL*HMLLPL
Trigger: CAGAGGGAGCAACATGTGCAATAACCTGAAGATGGA...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp AAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCCCTCTGCTTTCCATCTTCAGGTTATaGCACATGTTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: KVRQSSIFRLLHMLLPLLSIFRL*HMLLPL
Trigger: CAGAGGGAGCAACATGTGCAATAACCTGAAGATGGA...AAGCAGAGGGAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATCAGAAGTTTGTGCATCCCAAGCCCAACTaGCTGTATCAGAAGTTTGTG +
Preference number: 5 (lower is better)
Translates to: ETTRYNHPKPNLLYQKFVHPKPN*LYQKFV
Trigger: CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATG...CACAAACTTCTGATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp AGCCTTTCTAAGGAGACCACCCGTTATAATCATCCCAAGCCCAACTTGCTGTATTCTCTGAAGTCTGAGTaGAGTACCCTTCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: SLSKETTRYNHPKPNLLYSLKSE*STLPLS
Trigger: TGATAGAGGAAGGGTACTCAACTCAGACTTCAGAGA...ATACAGCAAGTTGGGCTTGGGATGATTATAACGGGTGGTCTCCTTAGAAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp GTAATGGCAAACAGGACTGGAACCCAGGACTTCAGGCCTCCACTTTCTACTGTAATCTGTTTCTTTTCTTaGAAGGTACGACAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: VMANRTGTQDFRPPLSTVICFFS*KVRQSS
Trigger: GGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGAT...TACAGTAGAAAGTGGAGGCCTGAAGTCCTGGGTTCCAGTCCTGTTTGCCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp TTCCTCTATCACAGGCAACACTTCCATCATAATTGCCTATGTAGATTCCATCTGTGGACCATCCCTGCTTaGCAGATGTGGCTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: FLYHRQHFHHNCLCRFHLWTIPA*QMWLKG
Trigger: CCCTTTTAGCCACATCTGCAAAGCAGGGATGGTCCA...CAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp TGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTGGGGTAATAGATGGTaGGCTCGTAGCCCTTGGCGA +
Preference number: 5 (lower is better)
Translates to: CFFSLKVRQSSIFRLLHMWGNRW*ARSPWR
Trigger: TCGCCAAGGGCTACGAGCCAACCATCTATTACCCCA...CATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679369.1
CDS-3UTR CAA 90 bp GGATTTTGCAGTGGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGGGAGAAAGAGAAATaGGGCTCAACTCTCAATACA +
Preference number: 5 (lower is better)
Translates to: GFCSGGEREIGLNSQYSMGEKEK*GSTLNT
Trigger: TGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCC...CATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCCACTGCAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS CCA 90 bp AAAGGGCTAAATCTAATGCTTGACTGGGGGCTTCTTGGGGGTGGGTaGAACTGTGTTGTACTAATCTTTGTATCCCTAGTACCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: KGLNLMLDWGLLGGG*NCVVLIFVSLVPQK
Trigger: TTTTTGAGGTACTAGGGATACAAAGATTAGTACAACACAGTTCCACCCACCCCCAAGAAGCCCCCAGTCAAGCATTAGATTTAGCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS-3UTR CAA 90 bp TTCCTCTATCACAGGCAACACTTCCATCATAATTGCCTATGTAGATTCCATCTGTGTTGCTCCCTCTGCTaGGGACATTCTTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: FLYHRQHFHHNCLCRFHLCCSLC*GHSSPF
Trigger: AAAGGGAGAAGAATGTCCCAAGCAGAGGGAGCAACA...CAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp TTCCTCTATCACAGGCAACACTTCCATCATAATTGCCTATGTAGATTCCATCTGCTGGGGCCTGAACAGTaGCCTTGTATGCCTTATCAA +
Preference number: 5 (lower is better)
Translates to: FLYHRQHFHHNCLCRFHLLGPEQ*PCMPYQ
Trigger: TTGATAAGGCATACAAGGCAACTGTTCAGGCCCCAG...CAGATGGAATCTACATAGGCAATTATGATGGAAGTGTTGCCTGTGATAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp AGTATTCATGAGTATTCAACCCTGAAAAATCAGGACACAGCTATCACCTACTCTGGAAAAACCGTGATTTaGGTTCCCGCGGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: SIHEYSTLKNQDTAITYSGKTVI*VPADVS
Trigger: AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCC...AGAGTAGGTGATAGCTGTGTCCTGATTTTTCAGGGTTGAATACTCATGAATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680269.1
ENST00000680661.1
CDS-3UTR CAA 90 bp GGGGGAGAAAGAGAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATAACTGGGGAGAAAGAGAAATaGGGCTCAACTCTCAATACA +
Preference number: 5 (lower is better)
Translates to: GGEREIGLNSQYSMGSITGEKEK*GSTLNT
Trigger: TGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCC...AGTTATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTCTCTTTCTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680004.1
ENST00000681523.1
CDS TCA 90 bp TATGTAGTGGTACAGTACAGATTCTGCAGACAAGCTGCCTGGGCTTaGATTCTACATGTTACCTGTGTGACCTTGAAGTCACTTAACCTT +
Preference number: 5 (lower is better)
Translates to: YVVVQYRFCRQAAWA*ILHVTCVTLKSLNL
Trigger: AAGGTTAAGTGACTTCAAGGTCACACAGGTAACATGTAGAATTCAAGCCCAGGCAGCTTGTCTGCAGAATCTGTACTGTACCACTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679913.1
CDS-3UTR CAA 90 bp GAAATTGGGCTCAACTCTCAATACAGCATGGGAAGTATAACTGAGGAATTTATAGGAAAAACCGTGATTTaGGTTCCCGCGGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: EIGLNSQYSMGSITEEFIGKTVI*VPADVS
Trigger: AGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCC...TATAAATTCCTCAGTTATACTTCCCATGCTGTATTGAGAGTTGAGCCCAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681523.1
CDS-3UTR CAA 90 bp TTTTCTTTGAAGGTACGACAGTCTTCCATCTTCAGGTTATTGCACATGTTGCTCATCTGTTTCTTTTCTTaGAAGGTACGACAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: FSLKVRQSSIFRLLHMLLICFFS*KVRQSS
Trigger: GGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGAT...GAGCAACATGTGCAATAACCTGAAGATGGAAGACTGTCGTACCTTCAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679369.1
ENST00000680087.1
ENST00000681734.1
CDS-3UTR CAA 90 bp ATAACAGATTCCAATCTGTTTCTTTTCTTTGAAGGTACGACAGTCTTCCATCTTGGCAGGTATGAGCTCTaGATAGATGGGCACATGAAA +
Preference number: 5 (lower is better)
Translates to: ITDSNLFLFFEGTTVFHLGRYEL*IDGHMK
Trigger: TTTCATGTGCCCATCTATCAAGAGCTCATACCTGCC...AAGATGGAAGACTGTCGTACCTTCAAAGAAAAGAAACAGATTGGAATCTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679369.1
ENST00000681734.1
CDS GCA 72 bp GGCTGCCCGTCTTGGGATCACAATGAAGGCCAAGCTTaGTCGCCTAGAGGCCCAGGAGCAGGCCTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: GCPSWDHNEGQA*SPRGPGAGLPG
Trigger: GCCAGGAAGGCCTGCTCCTGGGCCTCTAGGCGAGCAAGCTTGGCCTTCATTGTGATCCCAAGACGGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS TCA 72 bp CCTGCCTGCCTGCCCACCACTGGGGAGGCTACAGGCTaGGATAGCCTGAGACGAGTCAGGAGAGCCAGATTC +
Preference number: 6 (lower is better)
Translates to: PACLPTTGEATG*DSLRRVRRARF
Trigger: GAATCTGGCTCTCCTGACTCGTCTCAGGCTATCTCAGCCTGTAGCCTCCCCAGTGGTGGGCAGGCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS TCA 72 bp TGCCCACCACTGGGGAGGCTACAGGCTGAGATAGCCTaGGACGAGTCAGGAGAGCCAGATTCTGGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: CPPLGRLQAEIA*DESGEPDSGFS
Trigger: GCTGAAACCAGAATCTGGCTCTCCTGACTCGTCTCAGGCTATCTCAGCCTGTAGCCTCCCCAGTGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS GCA 72 bp CAGGCCAAATTGAGACCAGACAGTTTTTGTTCTCGGTaGCTGCCTGCCTGCCCACCACTGGGGAGGCTACAG +
Preference number: 6 (lower is better)
Translates to: QAKLRPDSFCSR*LPACPPLGRLQ
Trigger: CTGTAGCCTCCCCAGTGGTGGGCAGGCAGGCAGGCACCGAGAACAAAAACTGTCTGGTCTCAATTTGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS GCA 72 bp AGCAGCAGCAGCCCATCTCCTATCCAAGTTCGAGTATaGAGGATGGCACACCTCCCTGTGGCTCCTCAAGGA +
Preference number: 6 (lower is better)
Translates to: SSSSPSPIQVRV*RMAHLPVAPQG
Trigger: TCCTTGAGGAGCCACAGGGAGGTGTGCCATCCTGCATACTCGAACTTGGATAGGAGATGGGCTGCTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 72 bp CCTCCCTGTGGCTCCTCAAGGAGCAATGGTGGGGGCTaGCAAACCACTGCCTGGAGCTATAAATTCTTAGGG +
Preference number: 6 (lower is better)
Translates to: PPCGSSRSNGGG*QTTAWSYKFLG
Trigger: CCCTAAGAATTTATAGCTCCAGGCAGTGGTTTGCCAGCCCCCACCATTGCTCCTTGAGGAGCCACAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 72 bp GCAGCCCATCTCCTATCCAAGTTCGAGTATGCAGGATaGCACACCTCCCTGTGGCTCCTCAAGGAGCAATGG +
Preference number: 6 (lower is better)
Translates to: AAHLLSKFEYAG*HTSLWLLKEQW
Trigger: CCATTGCTCCTTGAGGAGCCACAGGGAGGTGTGCCATCCTGCATACTCGAACTTGGATAGGAGATGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS GCA 72 bp CCACTCCGGCCCCTGAGGGGTAGATCATGTGTTTACTaGATGCTAGGGCAAGAGGATCTGACTACAGAGTGG +
Preference number: 6 (lower is better)
Translates to: PLRPLRGRSCVY*MLGQEDLTTEW
Trigger: CCACTCTGTAGTCAGATCCTCTTGCCCTAGCATGCAGTAAACACATGATCTACCCCTCAGGGGCCGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS GCA 72 bp GTGGTGGAGCAGGAAAAGGATGTCAGAGCCAGCAGCTaGACAAACAGCCTTAACTGGAGAGGGCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: VVEQEKDVRASS*TNSLNWRGLSS
Trigger: AGAGGACAGCCCTCTCCAGTTAAGGCTGTTTGTGCAGCTGCTGGCTCTGACATCCTTTTCCTGCTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467374.2
ENST00000488840.1
ENST00000681825.1
ENST00000681922.1
CDS CCA 72 bp AGGAAGAGCAGAGCACAGGCAGTGGTTACTGTAGGATaGAGGTATTCAACTGGAGCCACCTACCTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: RKSRAQAVVTVG*RYSTGATYLCG
Trigger: CCCGCAGAGGTAGGTGGCTCCAGTTGAATACCTCCATCCTACAGTAACCACTGCCTGTGCTCTGCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CAA 72 bp GTCACTGATTCAGGCCAAATTGAGACCAGACAGTTTTaGTTCTCGGTGCCTGCCTGCCTGCCCACCACTGGG +
Preference number: 6 (lower is better)
Translates to: VTDSGQIETRQF*FSVPACLPTTG
Trigger: CCCAGTGGTGGGCAGGCAGGCAGGCACCGAGAACAAAAACTGTCTGGTCTCAATTTGGCCTGAATCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CAA 90 bp TGTGAGTTGGTCACTGATTCAGGCCAAATTGAGACCAGACAGTTTTaGTTCTCGGTGCCTGCCTGCCTGCCCACCACTGGGGAGGCTACA +
Preference number: 6 (lower is better)
Translates to: CELVTDSGQIETRQF*FSVPACLPTTGEAT
Trigger: TGTAGCCTCCCCAGTGGTGGGCAGGCAGGCAGGCACCGAGAACAAAAACTGTCTGGTCTCAATTTGGCCTGAATCAGTGACCAACTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS TCA 72 bp TGTCAGGACAGAGGAGGTAGAGAGCAGGGCATATGCTaGCCCATGCAGCCGAAGAAAGAAGAGGCAGCAACA +
Preference number: 6 (lower is better)
Translates to: CQDRGGREQGIC*PMQPKKEEAAT
Trigger: TGTTGCTGCCTCTTCTTTCTTCGGCTGCATGGGTCAGCATATGCCCTGCTCTCTACCTCCTCTGTCCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 72 bp ACAGGCAGTGGTTACTGTAGGATGGAGGTATTCAACTaGAGCCACCTACCTCTGCGGGCATTTCCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: TGSGYCRMEVFN*SHLPLRAFPQG
Trigger: TCCTTGGGGAAATGCCCGCAGAGGTAGGTGGCTCCAGTTGAATACCTCCATCCTACAGTAACCACTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CCA 72 bp CATTTCCCTTCTCCACGTCCCATCCTGAAAAGAGGGTaGTGTTCAGGAAGAGGCCAGATGTCTCGTCCCCTT +
Preference number: 6 (lower is better)
Translates to: HFPSPRPILKRG*CSGRGQMSRPL
Trigger: AAGGGGACGAGACATCTGGCCTCTTCCTGAACACCACCCTCTTTTCAGGATGGGACGTGGAGAAGGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467374.2
ENST00000681645.1
CDS CAA 90 bp GGCAAATTGGGCTCCGCAATGGTTTCTCCTGGAAAAACCGTGATTTaGGTTCCCGCGGACGTCTCTATGGTTTCGACAGCCTTCCCTCAC +
Preference number: 6 (lower is better)
Translates to: GKLGSAMVSPGKTVI*VPADVSMVSTAFPH
Trigger: GTGAGGGAAGGCTGTCGAAACCATAGAGACGTCCGCGGGAACCAAAATCACGGTTTTTCCAGGAGAAACCATTGCGGAGCCCAATTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000680269.1
ENST00000681523.1
ENST00000681825.1
ENST00000681922.1
CDS GCA 72 bp CCCCAGGGAAATGATTCCTATTACCTACCCATCTATTaGCTGAAGATAGGCAGCTCCCCACTCCTACCCTCC +
Preference number: 6 (lower is better)
Translates to: PQGNDSYYLPIY*LKIGSSPLLPS
Trigger: GGAGGGTAGGAGTGGGGAGCTGCCTATCTTCAGGCAATAGATGGGTAGGTAATAGGAATCATTTCCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 72 bp CACCAGCTCATACAGTTCATCAATCGTCATGGGCTGTaGTGGAGCAGGAAAAGGATGTCAGAGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: HQLIQFINRHGL*WSRKRMSEPAA
Trigger: AGCTGCTGGCTCTGACATCCTTTTCCTGCTCCACCACAGCCCATGACGATTGATGAACTGTATGAGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467374.2
ENST00000488840.1
ENST00000681825.1
ENST00000681922.1
CDS CAA 90 bp CTGAGGCCTAGAGAAAGTGTGAGTTGGTCACTGATTCAGGCCAAATaGAGACCAGACAGTTTTTGTTCTCGGTGCCTGCCTGCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LRPRESVSWSLIQAK*RPDSFCSRCLPACP
Trigger: TGGGCAGGCAGGCAGGCACCGAGAACAAAAACTGTCTGGTCTCAATTTGGCCTGAATCAGTGACCAACTCACACTTTCTCTAGGCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS TCA 72 bp CTTCAGATGGCAAGAGAAAGGGCTAAATCTAATGCTTaGCTGGGGGCTTCTTGGGGGTGGGTGGAACTGTGT +
Preference number: 6 (lower is better)
Translates to: LQMARERAKSNA*LGASWGWVELC
Trigger: ACACAGTTCCACCCACCCCCAAGAAGCCCCCAGTCAAGCATTAGATTTAGCCCTTTCTCTTGCCATCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS TCA 72 bp ATGGTGATGGTGTTGAGAAGGCCTTATCTACCCCCATaGCCCCTCCTAGATGGCTACATTGACTTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: MVMVLRRPYLPP*PLLDGYIDFRW
Trigger: CCACCTGAAGTCAATGTAGCCATCTAGGAGGGGTCATGGGGGTAGATAAGGCCTTCTCAACACCATCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 72 bp CAAGGAAGCTTTAGAGAAGGTGGTGTGTGGGACTCATaGAGCACACTTTATGAAGGAGGAGAAGGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: QGSFREGGVWDS*STLYEGGEGSC
Trigger: GCAAGAGCCTTCTCCTCCTTCATAAAGTGTGCTCCATGAGTCCCACACACCACCTTCTCTAAAGCTTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CAA 72 bp GGTACAGTACAGATTCTGCAGACAAGCTGCCTGGGCTaGAATTCTACATGTTACCTGTGTGACCTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: GTVQILQTSCLG*NSTCYLCDLEV
Trigger: GACTTCAAGGTCACACAGGTAACATGTAGAATTCAAGCCCAGGCAGCTTGTCTGCAGAATCTGTACTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679913.1
CDS TCA 72 bp GTACAGTACAGATTCTGCAGACAAGCTGCCTGGGCTTaGATTCTACATGTTACCTGTGTGACCTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: VQYRFCRQAAWA*ILHVTCVTLKS
Trigger: TGACTTCAAGGTCACACAGGTAACATGTAGAATTCAAGCCCAGGCAGCTTGTCTGCAGAATCTGTACTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679913.1
CDS GCA 72 bp TCATGGAGCACACTTTATGAAGGAGGAGAAGGCTCTTaGACACTTATTCGAATACCATCCGTTAGGCACCTT +
Preference number: 6 (lower is better)
Translates to: SWSTLYEGGEGS*TLIRIPSVRHL
Trigger: AAGGTGCCTAACGGATGGTATTCGAATAAGTGTGCAAGAGCCTTCTCCTCCTTCATAAAGTGTGCTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467374.2
ENST00000681825.1
ENST00000681922.1
CDS CCA 72 bp AATCTAATGCTTGACTGGGGGCTTCTTGGGGGTGGGTaGAACTGTGTTGTACTAATCTTTGTATCCCTAGTA +
Preference number: 6 (lower is better)
Translates to: NLMLDWGLLGGG*NCVVLIFVSLV
Trigger: TACTAGGGATACAAAGATTAGTACAACACAGTTCCACCCACCCCCAAGAAGCCCCCAGTCAAGCATTAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS TCA 72 bp CTGTGCCACCTCTTGGTTCTTTTTACCCCAGGGAAATaGTTCCTATTACCTACCCATCTATTGCCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: LCHLLVLFTPGK*FLLPTHLLPED
Trigger: ATCTTCAGGCAATAGATGGGTAGGTAATAGGAATCATTTCCCTGGGGTAAAAAGAACCAAGAGGTGGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CAA 72 bp CTCAAAAAGTGCCAGGTCCTGAACAAGAATTCAGTGTaGAAGGAATGTTTTAGAAGGAGGAGAGGTCAAGCC +
Preference number: 6 (lower is better)
Translates to: LKKCQVLNKNSV*KECFRRRRGQA
Trigger: GGCTTGACCTCTCCTCCTTCTAAAACATTCCTTCAACACTGAATTCTTGTTCAGGACCTGGCACTTTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680529.1
ENST00000681645.1
CDS CCA 72 bp TGGGAAGGTCCTGAATACAAATTAGAAGATATTCCTTaGAGGCCTTTGAAGAAATTCCTTCGGTTAACCTCT +
Preference number: 6 (lower is better)
Translates to: WEGPEYKLEDIP*RPLKKFLRLTS
Trigger: AGAGGTTAACCGAAGGAATTTCTTCAAAGGCCTCCAAGGAATATCTTCTAATTTGTATTCAGGACCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679649.1
ENST00000680529.1
ENST00000681645.1