Pregenerated sensors for NAV2-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000255270Ensembl transcript IDs: ENST00000528204.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGGTTCTGCCACTTCCTGTTGGCCTGCTGTCATGGAGAATGTCATaGAAGATCCCCGGAGATGGGAGCTCTTCCCTCCTGCACACCCAC | + |
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Preference number: 5 (lower is better) Translates to: KVLPLPVGLLSWRMS*KIPGDGSSSLLHTH Trigger: GTGGGTGTGCAGGAGGGAAGAGCTCCCATCTCCGGGGATCTTCCATGACATTCTCCATGACAGCAGGCCAACAGGAAGTGGCAGAACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS TCA 90 bp | GATAGCAAGGTCCATGGCGAGTGTATCAGCCAGAGAAGCCCGCACTaGACGCTTCCATACCAGATGCCTTGTTGTATGAAGGCTGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: DSKVHGECISQRSPH*TLPYQMPCCMKAAS Trigger: ACTCGCAGCCTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCGGGCTTCTCTGGCTGATACACTCGCCATGGACCTTGCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 90 bp | TGCTTTGTCATGAAGGTTCTGCCACTTCCTGTTGGCCTGCTGTCATaGAGAATGTCATGGAAGATCCCCGGAGATGGGAGCTCTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: CFVMKVLPLPVGLLS*RMSWKIPGDGSSSL Trigger: GAGGGAAGAGCTCCCATCTCCGGGGATCTTCCATGACATTCTCCATGACAGCAGGCCAACAGGAAGTGGCAGAACCTTCATGACAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 90 bp | AGCAGCACTCCAATGCTTTGTCATGAAGGTTCTGCCACTTCCTGTTaGCCTGCTGTCATGGAGAATGTCATGGAAGATCCCCGGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: SSTPMLCHEGSATSC*PAVMENVMEDPRRW Trigger: CCATCTCCGGGGATCTTCCATGACATTCTCCATGACAGCAGGCCAACAGGAAGTGGCAGAACCTTCATGACAAAGCATTGGAGTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 90 bp | GATGCCTTGTTGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTTGTaGTCTTCAGTCAGTTCAGAGAAGCTCATATTCACTGGGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: DALLYEGCEFPVFIL*SSVSSEKLIFTGHL Trigger: CAGGTGCCCAGTGAATATGAGCTTCTCTGAACTGACTGAAGACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 72 bp | CCACTTCCTGTTGGCCTGCTGTCATGGAGAATGTCATaGAAGATCCCCGGAGATGGGAGCTCTTCCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLPVGLLSWRMS*KIPGDGSSSLL Trigger: CAGGAGGGAAGAGCTCCCATCTCCGGGGATCTTCCATGACATTCTCCATGACAGCAGGCCAACAGGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 72 bp | ATGAAGGTTCTGCCACTTCCTGTTGGCCTGCTGTCATaGAGAATGTCATGGAAGATCCCCGGAGATGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: MKVLPLPVGLLS*RMSWKIPGDGS Trigger: GCTCCCATCTCCGGGGATCTTCCATGACATTCTCCATGACAGCAGGCCAACAGGAAGTGGCAGAACCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS TCA 72 bp | GTCCATGGCGAGTGTATCAGCCAGAGAAGCCCGCACTaGACGCTTCCATACCAGATGCCTTGTTGTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: VHGECISQRSPH*TLPYQMPCCMK Trigger: CTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCGGGCTTCTCTGGCTGATACACTCGCCATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CAA 90 bp | CAGCCAGAGAAGCCCGCACTGAACGCTTCCATACCAGATGCCTTGTaGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTTGTGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QPEKPALNASIPDAL*YEGCEFPVFILWSS Trigger: TGAAGACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCGGGCTTCTCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 72 bp | CCAATGCTTTGTCATGAAGGTTCTGCCACTTCCTGTTaGCCTGCTGTCATGGAGAATGTCATGGAAGATCCC | + |
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Preference number: 6 (lower is better) Translates to: PMLCHEGSATSC*PAVMENVMEDP Trigger: GGGATCTTCCATGACATTCTCCATGACAGCAGGCCAACAGGAAGTGGCAGAACCTTCATGACAAAGCATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CAA 72 bp | GAGAAGCCCGCACTGAACGCTTCCATACCAGATGCCTaGTTGTATGAAGGCTGCGAGTTTCCAGTTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: EKPALNASIPDA*LYEGCEFPVFI Trigger: GATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCGGGCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CAA 90 bp | TATCAGCCAGAGAAGCCCGCACTGAACGCTTCCATACCAGATGCCTaGTTGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTTGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: YQPEKPALNASIPDA*LYEGCEFPVFILWS Trigger: AGACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCGGGCTTCTCTGGCTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS TCA 72 bp | CGCACTGAACGCTTCCATACCAGATGCCTTGTTGTATaGAGGCTGCGAGTTTCCAGTTTTCATCTTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RTERFHTRCLVV*RLRVSSFHLVV Trigger: GACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CAA 72 bp | AAGCCCGCACTGAACGCTTCCATACCAGATGCCTTGTaGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: KPALNASIPDAL*YEGCEFPVFIL Trigger: CAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATCTGGTATGGAAGCGTTCAGTGCGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CAA 90 bp | CCAGATGCCTTGTTGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTaGTGGTCTTCAGTCAGTTCAGAGAAGCTCATATTCACTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PDALLYEGCEFPVFI*WSSVSSEKLIFTGH Trigger: GTGCCCAGTGAATATGAGCTTCTCTGAACTGACTGAAGACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAAGGCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CCA 72 bp | TTGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTTGTaGTCTTCAGTCAGTTCAGAGAAGCTCATATTCACT | + |
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Preference number: 6 (lower is better) Translates to: LYEGCEFPVFIL*SSVSSEKLIFT Trigger: AGTGAATATGAGCTTCTCTGAACTGACTGAAGACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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| CDS CAA 72 bp | TTGTTGTATGAAGGCTGCGAGTTTCCAGTTTTCATCTaGTGGTCTTCAGTCAGTTCAGAGAAGCTCATATTC | + |
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Preference number: 6 (lower is better) Translates to: LLYEGCEFPVFI*WSSVSSEKLIF Trigger: GAATATGAGCTTCTCTGAACTGACTGAAGACCACAAGATGAAAACTGGAAACTCGCAGCCTTCATACAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528204.1 |
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