RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134369

Ensembl transcript IDs: ENST00000367295.5, ENST00000367296.8, ENST00000367302.5, ENST00000430015.5, ENST00000438083.1, ENST00000469130.5, ENST00000477118.2, ENST00000490213.5, ENST00000491403.1, ENST00000593583.1

Found 2136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGCCGCCTCGTGGGTGGGGATGCTGTTGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGGACTCACCCTTTGCCCATTGCTGGG +
Preference number: 1 (lower is better)
Translates to: EGRLVGGDAVGAGDS*RGGRSGTHPLPIAG
Trigger: CCCAGCAATGGGCAAAGGGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp GTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGGCCGCCTCGTaGGTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCC +
Preference number: 1 (lower is better)
Translates to: VLPIWEPLYSSKAAS*VGMLLERVILGVVA
Trigger: GGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp ACAGCTCGAAGGCCGCCTCGTGGGTGGGGATGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCGCAGTGGGACTCACCCTTTGCCCAT +
Preference number: 1 (lower is better)
Translates to: TARRPPRGWGCCWSG*FLAWWPQWDSPFAH
Trigger: ATGGGCAAAGGGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp ATCCTGACCGAATCATTCCCTTGGGTCTCTCGGCCAGGGACAGGGTaGTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGGCCGCCTCGT +
Preference number: 1 (lower is better)
Translates to: ILTESFPWVSRPGTG*SPFGSRCTARRPPR
Trigger: ACGAGGCGGCCTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp CCCCCAGCATCTCCCAGACATGAATTTCCTGGGGTGTGCAGGACGTaGCCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGGGAGAGAA +
Preference number: 1 (lower is better)
Translates to: PPASPRHEFPGVCRT*PRPFALVGVAQGRE
Trigger: TTCTCTCCCTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAATTCATGTCTGGGAGATGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp AGCTCGGGGGCCTCCTCATTCTGCACAGCAGAGACCTTAAGGCAGTaGTTTCAGCACCATCCTTGGACACACAGCCTCTTCCCACCACAG +
Preference number: 1 (lower is better)
Translates to: SSGASSFCTAETLRQ*FQHHPWTHSLFPPQ
Trigger: CTGTGGTGGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAATCACTGCCTTAAGGTCTCTGCTGTGCAGAATGAGGAGGCCCCCGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 90 bp TGGATAAGGGGCCTTCCTGGGATACTGGAGCCCTACACTGTTAGCTaGCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAGT +
Preference number: 1 (lower is better)
Translates to: WIRGLPGILEPYTVS*HTEGGSGLVLRPSS
Trigger: ACTGCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTAGGGCTCCAGTATCCCAGGAAGGCCCCTTATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 90 bp TCTGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTaGTGGAATTGGGAAGGGTCTGTGAGAAAATCTGAGGAGCTTCCT +
Preference number: 1 (lower is better)
Translates to: SGLQPDLWGRSCWQW*WNWEGSVRKSEELP
Trigger: AGGAAGCTCCTCAGATTTTCTCACAGACCCTTCCCAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTaGGTCAACTCTAGTTTTCATCCACTGCTCCGCATGTCTGGAGCC +
Preference number: 1 (lower is better)
Translates to: RHSHGSYWLTILPPC*VNSSFHPLLRMSGA
Trigger: GGCTCCAGACATGCGGAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp CGCAGCTCCTTCATGCAGAGCTCTAGGAAATCGACGGCACTCTCATaGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTC +
Preference number: 1 (lower is better)
Translates to: RSSFMQSSRKSTALS*LLLAYNSPSLLGQL
Trigger: GAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCGTCGATTTCCTAGAGCTCTGCATGAAGGAGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp GTTTCTTCCTCCTCTGCTACTCCACTGCTTCACCCTTTCTTGCTTTaGAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTTGCAAGGCTGG +
Preference number: 1 (lower is better)
Translates to: VSSSSATPLLHPFLL*SCSLFPDSPGLQGW
Trigger: CCAGCCTTGCAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGAGGAAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp GGTGCGTTTCTTCCTCCTCTGCTACTCCACTGCTTCACCCTTTCTTaGTTTGCAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTTGCAAG +
Preference number: 1 (lower is better)
Translates to: GAFLPPLLLHCFTLS*FAAAPCSRILQVCK
Trigger: CTTGCAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGAGGAAGAAACGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp TTGTTGGCAGTGGTGATGGAATTGGGAAGGGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCCCAGATCTCCCTCACAAGACTGTCT +
Preference number: 1 (lower is better)
Translates to: LLAVVMELGRVCEKI*GASCLPQISLTRLS
Trigger: AGACAGTCTTGTGAGGGAGATCTGGGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGACCCTTCCCAATTCCATCACCACTGCCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp TTATTTTTGTGGTTTGGTGACTTCTCAGGTTGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: LFLWFGDFSGWQPSC*CPLCHPEGRSGQLS
Trigger: AGAGAGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGCCAACCTGAGAAGTCACCAAACCACAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp TTGAGAATCCAGGGTGACAGTGAGGTGGGGAGAAACTGGCATTCATaGGCAAGAACAGATGGTCAGCTTCGGCCTCTCTGTCCAGGAGAA +
Preference number: 1 (lower is better)
Translates to: LRIQGDSEVGRNWHS*ARTDGQLRPLCPGE
Trigger: TTCTCCTGGACAGAGAGGCCGAAGCTGACCATCTGTTCTTGCTCATGAATGCCAGTTTCTCCCCACCTCACTGTCACCCTGGATTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp TGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGGCTCTCTaGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGTGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: CQVCFMRSEGYQRAL*IRGRLVRKGAQWRS
Trigger: GCTCCTCCACTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp TATCCAGGTCCTGCTGTGGGGAAAAGAGAGGAGGAGCACAAGGACTaGAGTGCCCAGGTCTGTGTCTTCATTATGCAAGACTCTCCTATG +
Preference number: 1 (lower is better)
Translates to: YPGPAVGKREEEHKD*SAQVCVFIMQDSPM
Trigger: CATAGGAGAGTCTTGCATAATGAAGACACAGACCTGGGCACTTCAGTCCTTGTGCTCCTCCTCTCTTTTCCCCACAGCAGGACCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 90 bp AAGGTGCTCAGTGGAGGAGCTAAGGCCACTTGGTTTGGCATAGTTTaGCCTCTAGCTGGCCAACTGGCTGCAAGATGTATAGGCAAGGTA +
Preference number: 1 (lower is better)
Translates to: KVLSGGAKATWFGIV*PLAGQLAARCIGKV
Trigger: TACCTTGCCTATACATCTTGCAGCCAGTTGGCCAGCTAGAGGTCAAACTATGCCAAACCAAGTGGCCTTAGCTCCTCCACTGAGCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp CTGTGTCTTCATTATGCAAGACTCTCCTATGAGCTGAGTGGAGTGTaGATAAGGGGCCTTCCTGGGATACTGGAGCCCTACACTGTTAGC +
Preference number: 1 (lower is better)
Translates to: LCLHYARLSYELSGV*IRGLPGILEPYTVS
Trigger: GCTAACAGTGTAGGGCTCCAGTATCCCAGGAAGGCCCCTTATCCACACTCCACTCAGCTCATAGGAGAGTCTTGCATAATGAAGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 90 bp TCTATCAAGATGGGGCTATACCTTCTCATGACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGG +
Preference number: 1 (lower is better)
Translates to: SIKMGLYLLMTEAGN*ATQQNVCSQKGSQG
Trigger: CCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCATCTTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp AAGCTCGGAGTAACTCTTCTATCAAGATGGGGCTATACCTTCTCATaGCAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: KLGVTLLSRWGYTFS*QRLAIELPSRTCAL
Trigger: GAGAGCACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCATCTTGATAGAAGAGTTACTCCGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp GCCTTGATCTTTCCGTACTTCATGGCACTCACATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACTTTTTCCTGGGATGATTCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: ALIFPYFMALTLAES*DVKVATFSWDDSSS
Trigger: GGAACTGGAATCATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGTGAGTGCCATGAAGTACGGAAAGATCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp CTTGAGGGCAGGGTTCTGACCCTCGGCAAAAATCTGCCTTTAAGATaGAGAACCCACCGTGTCTGGGTGTTTAGTTTGTTCTCTCTTAGC +
Preference number: 1 (lower is better)
Translates to: LEGRVLTLGKNLPLR*RTHRVWVFSLFSLS
Trigger: GCTAAGAGAGAACAAACTAAACACCCAGACACGGTGGGTTCTGCATCTTAAAGGCAGATTTTTGCCGAGGGTCAGAACCCTGCCCTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp ATGAATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTaGTGGGTGTGGCACAAGGGAGAGAAAAGATGGTTCTTGTTTATG +
Preference number: 1 (lower is better)
Translates to: MNFLGCAGRDPGHLL*WVWHKGEKRWFLFM
Trigger: CATAAACAAGAACCATCTTTTCTCTCCCTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp CCCACTGTGCAGGCAACATCTGTCTTCTTGACCTCAGGTCTTCTCTaGTTTGCTTCTCTACATCCTGCATGTCTGCTTGTAGACTCCTTG +
Preference number: 1 (lower is better)
Translates to: PTVQATSVFLTSGLL*FASLHPACLLVDSL
Trigger: CAAGGAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTCAAGAAGACAGATGTTGCCTGCACAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp CCCGCGGGGCTTTCAGAAATGGCAGGAAGTAGACTTGCCCATTCCTaGCAAGCAAGATTCCATAGTCCTTCAGGCTCCATCTTAATTGAT +
Preference number: 1 (lower is better)
Translates to: PAGLSEMAGSRLAHS*QARFHSPSGSILID
Trigger: ATCAATTAAGATGGAGCCTGAAGGACTATGGAATCTTGCTTGTCAGGAATGGGCAAGTCTACTTCCTGCCATTTCTGAAAGCCCCGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp CCTAAATGCAGGGTTTCTATGTGGATGCCATCCCAAGTGAGGATGTaGGGTGTCTGTGAGAAGCAGCAGGCTACCATTTCTCTCTTCCTA +
Preference number: 1 (lower is better)
Translates to: PKCRVSMWMPSQVRM*GVCEKQQATISLFL
Trigger: TAGGAAGAGAGAAATGGTAGCCTGCTGCTTCTCACAGACACCTCACATCCTCACTTGGGATGGCATCCACATAGAAACCCTGCATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 90 bp GCTGCTGGTCTTGTGCCATACTTTGCGAACCACTGCTTTAAGGAATaGGAAACCAGGGGATCACTCACTTACTTCCATGACCACCCTTGT +
Preference number: 1 (lower is better)
Translates to: AAGLVPYFANHCFKE*ETRGSLTYFHDHPC
Trigger: ACAAGGGTGGTCATGGAAGTAAGTGAGTGATCCCCTGGTTTCTCATTCCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGACCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 90 bp TCTACCATCTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATaGAGGAGTCAGACCAGAATGGGAGTTAGGTTTCTCAGTAGTGTC +
Preference number: 1 (lower is better)
Translates to: STICPRRLLRKGSWE*RSQTRMGVRFLSSV
Trigger: GACACTACTGAGAAACCTAACTCCCATTCTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp AGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTCTGAGCCAATaGTTCATGTCTCATATAAGCCCCATGGATGCCAAAGATAGTGGC +
Preference number: 1 (lower is better)
Translates to: SQGNWVPLLPLLLSQ*FMSHISPMDAKDSG
Trigger: GCCACTATCTTTGGCATCCATGGGGCTTATATGAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 90 bp TCATGCAGAGCTCTAGGAAATCGACGGCACTCTCATGGCTCCTACTaGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCAT +
Preference number: 1 (lower is better)
Translates to: SCRALGNRRHSHGSY*LTILPPCWVNSSFH
Trigger: ATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCGTCGATTTCCTAGAGCTCTGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp TGTGAGGGGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATaGAGATTCAGATGCATCTACTCCTCGGTTGGGTGGAAGAGTGAT +
Preference number: 1 (lower is better)
Translates to: CEGQPGPSFGLNIPI*RFRCIYSSVGWKSD
Trigger: ATCACTCTTCCACCCAACCGAGGAGTAGATGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCCCCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp AAAACAGCGTCATTAGTTGGGATTAGCAGGAGCCCTGAGCCCTTATaGTGTGTCAGGCAATGGGCGAGGCATTGGAATTCTGCAAAACTT +
Preference number: 1 (lower is better)
Translates to: KTASLVGISRSPEPL*CVRQWARHWNSAKL
Trigger: AAGTTTTGCAGAATTCCAATGCCTCGCCCATTGCCTGACACATCATAAGGGCTCAGGGCTCCTGCTAATCCCAACTAATGACGCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp ATCCGAAGTTCTTTGGGTGTGGTTTCTGAGGCATTAAGGGCTCCCTaGATGACTGCCTGGGCCTCAGAGTTCTTTTTCTTCAGAAAGTCT +
Preference number: 1 (lower is better)
Translates to: IRSSLGVVSEALRAP*MTAWASEFFFFRKS
Trigger: AGACTTTCTGAAGAAAAAGAACTCTGAGGCCCAGGCAGTCATTCAGGGAGCCCTTAATGCCTCAGAAACCACACCCAAAGAACTTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp TCGTTTCTAACAAGTTCCCAAAGGCTGCTGATGCTGCTGGTCTTGTaGCATACTTTGCGAACCACTGCTTTAAGGAATGAGAAACCAGGG +
Preference number: 1 (lower is better)
Translates to: SFLTSSQRLLMLLVL*HTLRTTALRNEKPG
Trigger: CCCTGGTTTCTCATTCCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGACCAGCAGCATCAGCAGCCTTTGGGAACTTGTTAGAAACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 90 bp TGTCTTCTTGACCTCAGGTCTTCTCTGGTTTGCTTCTCTACATCCTaGATGTCTGCTTGTAGACTCCTTGTAGTCCCTGGAAGACTACTC +
Preference number: 1 (lower is better)
Translates to: CLLDLRSSLVCFSTS*MSACRLLVVPGRLL
Trigger: GAGTAGTCTTCCAGGGACTACAAGGAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTCAAGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp TGTGCAGGCAACATCTGTCTTCTTGACCTCAGGTCTTCTCTGGTTTaGTTCTCTACATCCTGCATGTCTGCTTGTAGACTCCTTGTAGTC +
Preference number: 1 (lower is better)
Translates to: CAGNICLLDLRSSLV*FSTSCMSACRLLVV
Trigger: GACTACAAGGAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTCAAGAAGACAGATGTTGCCTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp CTTGGAAAGCTCCTGCAGATCCGGCTCAGCTGTTGTTTACAGCTTTaGGGGAAAATGGCTCTTATGTTCTCTGTTTGCAACTCAGTCACA +
Preference number: 1 (lower is better)
Translates to: LGKLLQIRLSCCLQL*GKMALMFSVCNSVT
Trigger: TGTGACTGAGTTGCAAACAGAGAACATAAGAGCCATTTTCCCCCAAAGCTGTAAACAACAGCTGAGCCGGATCTGCAGGAGCTTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp TTCTTCTTTTTCGCATCAGCATCCTTGCTGCTGCCGATGCTGGAATaGCTAGTGATGCTGTTGAGGCTTGAGATGCTATCTGAGGAGTTT +
Preference number: 1 (lower is better)
Translates to: FFFFASASLLLPMLE*LVMLLRLEMLSEEF
Trigger: AAACTCCTCAGATAGCATCTCAAGCCTCAACAGCATCACTAGCCATTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGAAAAAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp GGTTTCTATGTGGATGCCATCCCAAGTGAGGATGTGAGGTGTCTGTaGGAAGCAGCAGGCTACCATTTCTCTCTTCCTACTCTTTTAGAA +
Preference number: 1 (lower is better)
Translates to: GFYVDAIPSEDVRCL*EAAGYHFSLPTLLE
Trigger: TTCTAAAAGAGTAGGAAGAGAGAAATGGTAGCCTGCTGCTTCTCACAGACACCTCACATCCTCACTTGGGATGGCATCCACATAGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 90 bp GTCATATTCACCAGGCTCTGCTCAAAAGCAGCCACCAGATTAGCCTaGAACAAACACAGAAAGAGATTGCTAAGTTGCATAAGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: VIFTRLCSKAATRLA*NKHRKRLLSCIRLG
Trigger: CCCCAGCCTTATGCAACTTAGCAATCTCTTTCTGTGTTTGTTTCAGGCTAATCTGGTGGCTGCTTTTGAGCAGAGCCTGGTGAATATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp GGGCAGTGGAAAGGCTCTAAGAGCCCTATAATTATAATCCATAACTaGTTTTGTCCATGGCCAATGGCAAGGTTGTTTCTGCCTCCATGC +
Preference number: 1 (lower is better)
Translates to: GQWKGSKSPIIIIHN*FCPWPMARLFLPPC
Trigger: GCATGGAGGCAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGTTATGGATTATAATTATAGGGCTCTTAGAGCCTTTCCACTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp CTCAACCTGAATTTCAGATTGTTTCTACCATCTGCCCAAGGAGACTaGTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGAATGG +
Preference number: 1 (lower is better)
Translates to: LNLNFRLFLPSAQGD*SEKAVGNEGVRPEW
Trigger: CCATTCTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATGGTAGAAACAATCTGAAATTCAGGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp TTTCTTGGCTTCAGCCCAGCCTTGACAGCATGGTGGCTGACAGATTaGAGTGTAAATGAATCAGACATAATAATGTTCTCTGCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: FLGFSPALTAWWLTD*SVNESDIIMFSASL
Trigger: CAGGGAGGCAGAGAACATTATTATGTCTGATTCATTTACACTGCAATCTGTCAGCCACCATGCTGTCAAGGCTGGGCTGAAGCCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp GAAGGAGTCAGACCAGAATGGGAGTTAGGTTTCTCAGTAGTGTCGTaGTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAG +
Preference number: 1 (lower is better)
Translates to: EGVRPEWELGFSVVS*SLDRILMTNHVPAQ
Trigger: CTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCATTCTGGTCTGACTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp GACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGAATaGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATT +
Preference number: 1 (lower is better)
Translates to: DCSEKAVGNEGVRPE*ELGFSVVSWSLDRI
Trigger: AATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCATTCTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp CAAATTCCAGTATTAGGCTGGATTCTTCTGAAGGTGCCTGGCGGTTaGGAATTTAGCTATGGGACCCAGTGTTTCTTTTCTGAAGGATCC +
Preference number: 1 (lower is better)
Translates to: QIPVLGWILLKVPGG*EFSYGTQCFFSEGS
Trigger: GGATCCTTCAGAAAAGAAACACTGGGTCCCATAGCTAAATTCTCAACCGCCAGGCACCTTCAGAAGAATCCAGCCTAATACTGGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp AAATTTTACCTAAATGCAGGGTTTCTATGTGGATGCCATCCCAAGTaGGGATGTGAGGTGTCTGTGAGAAGCAGCAGGCTACCATTTCTC +
Preference number: 1 (lower is better)
Translates to: KFYLNAGFLCGCHPK*GCEVSVRSSRLPFL
Trigger: GAGAAATGGTAGCCTGCTGCTTCTCACAGACACCTCACATCCTCACTTGGGATGGCATCCACATAGAAACCCTGCATTTAGGTAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 90 bp ATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATaGCATCAGATTCTCCAAAGAAAACCCACTTGGAAAAGCCAAACT +
Preference number: 1 (lower is better)
Translates to: MDAKDSGMAGVMPIA*HQILQRKPTWKSQT
Trigger: AGTTTGGCTTTTCCAAGTGGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 90 bp TCAAGGCAATGGGAAAGGAGCAAATCTGCAAAGGTAGGATCTCTTTaGAAGGCAGGTATTGGCCACCAAGTCAAACTCCTTGAGTCTTAT +
Preference number: 1 (lower is better)
Translates to: SRQWERSKSAKVGSL*KAGIGHQVKLLESY
Trigger: ATAAGACTCAAGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCCCATTGCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 90 bp TATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTaGCATTTTGATAGGTATCCTCCCTTCAAGGCTACATCTTCTGGG +
Preference number: 1 (lower is better)
Translates to: YTQVEFSTVFVSLQL*HFDRYPPFKATSSG
Trigger: CCCAGAAGATGTAGCCTTGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 90 bp GGCTCTAAGAGCCCTATAATTATAATCCATAACTGCTTTTGTCCATaGCCAATGGCAAGGTTGTTTCTGCCTCCATGCAGAACCACTGGT +
Preference number: 1 (lower is better)
Translates to: GSKSPIIIIHNCFCP*PMARLFLPPCRTTG
Trigger: ACCAGTGGTTCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGTTATGGATTATAATTATAGGGCTCTTAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp AACTACTGCGGAAATTGCAGACATGGTTACTTTTGTGCAAACACTTaGAAAGCTCCTGCAGATCCGGCTCAGCTGTTGTTTACAGCTTTG +
Preference number: 1 (lower is better)
Translates to: NYCGNCRHGYFCANT*KAPADPAQLLFTAL
Trigger: CAAAGCTGTAAACAACAGCTGAGCCGGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAAGTAACCATGTCTGCAATTTCCGCAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp GGAACTTCCTGTTCTAAGAAAAATCACCCTCTAAATTCAATTTCTTaGCTTCAGCCCAGCCTTGACAGCATGGTGGCTGACAGATTGCAG +
Preference number: 1 (lower is better)
Translates to: GTSCSKKNHPLNSIS*LQPSLDSMVADRLQ
Trigger: CTGCAATCTGTCAGCCACCATGCTGTCAAGGCTGGGCTGAAGCCAAGAAATTGAATTTAGAGGGTGATTTTTCTTAGAACAGGAAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp ACCCTCGGCAAAAATCTGCCTTTAAGATGCAGAACCCACCGTGTCTaGGTGTTTAGTTTGTTCTCTCTTAGCCAAATGGAACTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: TLGKNLPLRCRTHRV*VFSLFSLSQMELPV
Trigger: AACAGGAAGTTCCATTTGGCTAAGAGAGAACAAACTAAACACCCAGACACGGTGGGTTCTGCATCTTAAAGGCAGATTTTTGCCGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 90 bp GGATCTAGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTaGAGCTTTGGCATTTTGATAGGTATCCTCCCTTCAAGGCTACAT +
Preference number: 1 (lower is better)
Translates to: GSSIHRLNFQPSSCP*SFGILIGILPSRLH
Trigger: ATGTAGCCTTGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACTAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 90 bp TACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATaGGAAAGGAGCAAATCTGCAAAGGTAGGATCTCTTTGGAAGGCA +
Preference number: 1 (lower is better)
Translates to: YLSNERTGIARPSRQ*ERSKSAKVGSLWKA
Trigger: TGCCTTCCAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 90 bp ACACAGCCTCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCTCATGGAATTAGCAGCAATAGCAAT +
Preference number: 1 (lower is better)
Translates to: TQPLPTTELHMLQLS*LGIFTAHGISSNSN
Trigger: ATTGCTATTGCTGCTAATTCCATGAGCTGTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGAGGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp AGGATCTCTTTGGAAGGCAGGTATTGGCCACCAAGTCAAACTCCTTaGGTCTTATATTCTGATTGGGATGATCTCACATGGATGTTCATC +
Preference number: 1 (lower is better)
Translates to: RISLEGRYWPPSQTP*VLYSDWDDLTWMFI
Trigger: GATGAACATCCATGTGAGATCATCCCAATCAGAATATAAGACTCAAGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAAAGAGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 90 bp CCTTCCCAATGGTTAGACATGAAAAAGACATGGGTACTTAAGGATTaGCACAAAGACAGAGATAAGCACCGTAGAGCTGCCACAAAGCAT +
Preference number: 1 (lower is better)
Translates to: PSQWLDMKKTWVLKD*HKDRDKHRRAATKH
Trigger: ATGCTTTGTGGCAGCTCTACGGTGCTTATCTCTGTCTTTGTGTCAATCCTTAAGTACCCATGTCTTTTTCATGTCTAACCATTGGGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 90 bp GTTTTCCTCCCTTGGCTGAACTTGTCTAACGATAGTCAAAATAACTaGCTTGATCTTTCCGTACTTCATGGCACTCACATTGGCAGAAAG +
Preference number: 1 (lower is better)
Translates to: VFLPWLNLSNDSQNN*LDLSVLHGTHIGRK
Trigger: CTTTCTGCCAATGTGAGTGCCATGAAGTACGGAAAGATCAAGGCAGTTATTTTGACTATCGTTAGACAAGTTCAGCCAAGGGAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 90 bp TTTTATTACTATGGCCTTCTCAGTGGAGCCATGAGCCAGAACTTGTaGGTAGTATATCCATCTCTATTAATAAACCCTCTGCAAAAGCCC +
Preference number: 1 (lower is better)
Translates to: FYYYGLLSGAMSQNL*VVYPSLLINPLQKP
Trigger: GGGCTTTTGCAGAGGGTTTATTAATAGAGATGGATATACTACTCACAAGTTCTGGCTCATGGCTCCACTGAGAAGGCCATAGTAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 90 bp AAAGAGTTCTTAAGGTCTCATGCAGATATCTTCTTGACCTTGATTTaGAGGACTGAGTCCCCTTCAGTCAGGCAAATTTTACCTAAATGC +
Preference number: 1 (lower is better)
Translates to: KEFLRSHADIFLTLI*RTESPSVRQILPKC
Trigger: GCATTTAGGTAAAATTTGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATGAGACCTTAAGAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 90 bp AACATGAGCTTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTaGGAAAAGAGAATCGAGAGAATAACTAGTGTGGTGAGGGAACTG +
Preference number: 1 (lower is better)
Translates to: NMSFKQTGTTYELRV*EKRIERITSVVREL
Trigger: CAGTTCCCTCACCACACTAGTTATTCTCTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAAGCTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 90 bp AGATGGTTCTTGTTTATGTTACAATTCTTATGGGTCCCCCAAGAGTaGGAAAAAGTGCTTAACATGAGCTTCAAACAAACTGGTACAACT +
Preference number: 1 (lower is better)
Translates to: RWFLFMLQFLWVPQE*EKVLNMSFKQTGTT
Trigger: AGTTGTACCAGTTTGTTTGAAGCTCATGTTAAGCACTTTTTCCCACTCTTGGGGGACCCATAAGAATTGTAACATAAACAAGAACCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp GAGCCGCTGTACAGCTCGAAGGCCGCCTCGTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCACC +
Preference number: 2 (lower is better)
Translates to: EPLYSSKAASWVGML*ERVILGVVAAVGLT
Trigger: GGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGCTGTACAGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp AATCATTCCCTTGGGTCTCTCGGCCAGGGACAGGGTGCTCCCCATTaGGGAGCCGCTGTACAGCTCGAAGGCCGCCTCGTGGGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: NHSLGSLGQGQGAPH*GAAVQLEGRLVGGD
Trigger: ATCCCCACCCACGAGGCGGCCTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAGACCCAAGGGAATGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp ACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTaGGGTCTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCG +
Preference number: 2 (lower is better)
Translates to: TSSVGSRKDPDRIIP*GLSARDRVLPIWEP
Trigger: CGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGGTGGGACTCACCCTTTaGCCATTGCTGGGATTACAG +
Preference number: 2 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKVGLTL*PLLGLQ
Trigger: CTGTAATCCCAGCAATGGGCAAAGGGTGAGTCCCAC...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNGAGDS*RGGRSG
Trigger: CCCACTGCGGCCACCACGCCAAGAATCACCCGCTCC...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTTCGAAGGCCGCCTCGTaGGTGGGGATGCTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: SREHRPWGLGRILTESFPSKAAS*VGMLLE
Trigger: CTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGA...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRCCWSG*FLAWWP
Trigger: CGGCCACCACGCCAAGAATCACCCGCTCCAACAGCA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTAGGGTGCTCCCCATTTaGGAGCCGCTGTACAGCTCG +
Preference number: 2 (lower is better)
Translates to: SREHRPWGLGRILTESFPRVLPI*EPLYSS
Trigger: CGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCT...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTCCTGTTCTCCTCCTaGGGCTGGAGAGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLLFSS*GWRASA
Trigger: AGCACTGGCTCTCCAGCCCCAGGAGGAGAACAGGAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGATCCCATCTCCTGCTTaGGGGCAGGGTTCTGACCCT +
Preference number: 2 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWIPSPA*GQGSDP
Trigger: AGGGTCAGAACCCTGCCCTCAAGCAGGAGATGGGAT...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTCCAGCCAGATCTCTaGGGGAGGAGTTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLQPDL*GRSCWQ
Trigger: CTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCAGGCCGCCTCGTGGGTaGGGATGCTGTTGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLRPPRG*GCCWSG
Trigger: CCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCT...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGCGTGAACATCGTCCGTaGGGTCTCGGAAGGATCCTG +
Preference number: 2 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWREHRP*GLGRIL
Trigger: CAGGATCCTTCCGAGACCCCACGGACGATGTTCACG...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTTCCAGGGCTAGGCTaGGCAGACATGCACCCATGC +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLPGLG*ADMHPC
Trigger: GCATGGGTGCATGTCTGCTCAGCCTAGCCCTGGAAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACCTGGAAGACTACTCATaGGAGGCCCCAAGAACCCCT +
Preference number: 2 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNLEDYS*EAPRTP
Trigger: AGGGGTTCTTGGGGCCTCTCATGAGTAGTCTTCCAG...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTGATGCCAGCGTTCTaGTGTCCGGGGGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLMPAF*CPGVTV
Trigger: CACTGTCACCCCCGGACAGCAGAACGCTGGCATCAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCTCCTGTTCTCCTCCTaGGGCTGGAGAGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILLFSS*GWRASA
Trigger: AGCACTGGCTCTCCAGCCCCAGGAGGAGAACAGGAG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTCCAGCCAGATCTCTaGGGGAGGAGTTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLQPDL*GRSCWQ
Trigger: CTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp CCTTTCTTGCTTTGCAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTaGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTTGGCC +
Preference number: 2 (lower is better)
Translates to: PFLLCSCSLFPDSPG*QGWKETAEAFHRLA
Trigger: GGCCAAACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGGTTGGGTGGAAGAGTaGTCCAGGTTGGTATGCCTA +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLGWVEE*SRLVCL
Trigger: TAGGCATACCAACCTGGATCACTCTTCCACCCAACC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAAGGTGCCTGGCGGTTaGGAATTTAGCTATGGGACC +
Preference number: 2 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSKVPGG*EFSYGT
Trigger: GGTCCCATAGCTAAATTCTCAACCGCCAGGCACCTT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGTTCCCAAAGGCTGCTaGTGCTGCTGGTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWVPKGC*CCWSCA
Trigger: GGCACAAGACCAGCAGCATCAGCAGCCTTTGGGAAC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGAAAGCTTCCGGATTTGTaGGGAGTAGGTGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRKLPDL*GVGGGG
Trigger: GCCTCCTCCACCTACTCCTCACAAATCCGGAAGCTT...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTTCTCCTCCTGGGGCTaGAGAGCCAGTGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPFSSWG*RASALK
Trigger: TTTCAGAGCACTGGCTCTCCAGCCCCAGGAGGAGAA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCTCCAGCCAGATCTCTaGGGGAGGAGTTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: TCALKREVKGTGFLFSLYLQPDL*GRSCWQ
Trigger: CTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGCAGAAGGCACTGGCTaGGCAGCACCAGAAAATAGA +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLAEGTG*AAPENR
Trigger: TCTATTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCGCGTGGTGGCCGCAGTaGGACTCACCCTTTGCCCAT +
Preference number: 2 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCAWWPQ*DSPFAH
Trigger: ATGGGCAAAGGGTGAGTCCCACTGCGGCCACCACGC...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGCTCAGGGCTAAGCAGTaGTGCTGCAGAAAGGCTAGC +
Preference number: 2 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQLRAKQ*CCRKAS
Trigger: GCTAGCCTTTCTGCAGCACCACTGCTTAGCCCTGAG...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp CCAGACATGAATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTaGCTTTGGTGGGTGTGGCACAAGGGAGAGAAAAGATGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: PDMNFLGCAGRDPGH*LWWVWHKGEKRWFL
Trigger: CAAGAACCATCTTTTCTCTCCCTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAATTCATGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp CGTTTCTTCCTCCTCTGCTACTCCACTGCTTCACCCTTTCTTGCTTaGCAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTTGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RFFLLCYSTASPFLA*QLLLVPGFSRFARL
Trigger: CAGCCTTGCAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGAGGAAGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVCEKI*GASCLP
Trigger: GGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTGTCTCGGAAGGATCCTaGCCGAATCATTCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: EGYQRALWIRGRLVRKGAVSEGS*PNHSLG
Trigger: CCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGAC...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAACGGCCAGGGACAGGGTaGTCCCCATTTGGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQRPGTG*SPFGSR
Trigger: GCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCG...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTGGCAAGGTTGTTTCTaGCTCCATGCAGAACCACTG +
Preference number: 2 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRWQGCF*LHAEPL
Trigger: CAGTGGTTCTGCATGGAGGCAGAAACAACCTTGCCA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGATCTGCCCAAGGAGACTaGTCAGAAAAGGCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRSAQGD*SEKAVG
Trigger: CCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGA...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGTATGCTCTTCTGTGCTaGCTTTCCCCATCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQYALLC*LSPSRG
Trigger: TCCCCTGGATGGGGAAAGGCAGCACAGAAGAGCATA...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCATGCTTCTCTACATCCTaGATGTCTGCTTGTAGACTC +
Preference number: 2 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEACFSTS*MSACRL
Trigger: GAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCA...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTACTCCTCGGTTGGGTaGAAGAGTGATCCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: APEGKPRLQYYLTRREHTYSSVG*KSDPGW
Trigger: CCAACCTGGATCACTCTTCCACCCAACCGAGGAGTA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTTTCAGCACCATCCTTaGACACACAGCCTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLFQHHP*THSLFP
Trigger: TGGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGCCCTTTGCCCATTGCTaGGATTACAGCCTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: RGESTTAWLEEVASFLPMPFAHC*DYSLSG
Trigger: CCCTGAAAGGCTGTAATCCCAGCAATGGGCAAAGGG...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGAACTGCTTTTGTCCATaGCCAATGGCAAGGTTGTTT +
Preference number: 2 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKNCFCP*PMARLF
Trigger: AAACAACCTTGCCATTGGCCATGGACAAAAGCAGTT...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTTGAGAGGGGTAAAGTaGTCTGGGCCCCTACATCTA +
Preference number: 2 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRLRGVK*SGPLHL
Trigger: TAGATGTAGGGGCCCAGACCACTTTACCCCTCTCAA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCCCCTTTTGCTCTGGCTaGGCTTTCTCCCCGCTCTCC +
Preference number: 2 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCPFCSG*AFSPLS
Trigger: GGAGAGCGGGGAGAAAGCCCAGCCAGAGCAAAAGGG...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAACCTCAGGTCTTCTCTaGTTTGCTTCTCTACATCCT +
Preference number: 2 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEATSGLL*FASLHP
Trigger: AGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp CCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTaGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATAC +
Preference number: 2 (lower is better)
Translates to: PGLQGWKETAEAFHR*ATRCQVCFMRSEGY
Trigger: GTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp TGGTGCGTTTCTTCCTCCTCTGCTACTCCACTGCTTCACCCTTTCTaGCTTTGCAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTTGCAA +
Preference number: 2 (lower is better)
Translates to: WCVSSSSATPLLHPF*LCSCSLFPDSPGLQ
Trigger: TTGCAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGAGGAAGAAACGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCTTCTCCCTCTACTTCTaGGCCAATGCTTCATGTCTC +
Preference number: 2 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSFSLYF*ANASCL
Trigger: GAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAA...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCATGGCATTAAAAGTCTaGGCCTTGCCATGGAACTGG +
Preference number: 2 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSMALKV*ALPWNW
Trigger: CCAGTTCCATGGCAAGGCTCAGACTTTTAATGCCAT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCACTTTTTCCTGGGATaGTTCCAGTTCCCTACGAAG +
Preference number: 2 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRHFFLG*FQFPTK
Trigger: CTTCGTAGGGAACTGGAATCATCCCAGGAAAAAGTG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGGGCTGGAGAGCCAGTaGTCTGAAAGAGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWGLESQ*SERGEG
Trigger: CCCCTCTCCTCTTTCAGAGCACTGGCTCTCCAGCCC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGTCACCCTTTGCCCATTaGTGGGATTACAGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWSPFAH*WDYSLS
Trigger: TGAAAGGCTGTAATCCCAGCAATGGGCAAAGGGTGA...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAGCCAAACTAGCCCCTaGAAAAGCAACCCAAGCATC +
Preference number: 2 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSQTSP*KSNPSI
Trigger: GATGCTTGGGTTGCTTTTCCAGGGGCTAGTTTGGCT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGCCAAACTAGCCCCTaGAAAAGCAACCCAAGCATC +
Preference number: 2 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSQTSP*KSNPSI
Trigger: GATGCTTGGGTTGCTTTTCCAGGGGCTAGTTTGGCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGTGAAAGGCCAAACTaGCCACAAGACAGAGGAATG +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSERPN*PQDRGM
Trigger: CATTCCTCTGTCTTGTGGCCAGTTTGGCCTTTCACT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAAGGTAGGATCTCTTTaGAAGGCAGGTATTGGCCAC +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLKVGSL*KAGIGH
Trigger: GTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGGGGCGTAGCTGAATaGAGGTTAACATTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGGVAE*RLTFPA
Trigger: AGCAGGAAATGTTAACCTCCATTCAGCTACGCCCCC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCAGGTGGAGGAGGCACTaGAGGCCAGGGACAGCACTG +
Preference number: 2 (lower is better)
Translates to: WELGFSVVSWSLDRILMTRWRRH*RPGTAL
Trigger: CAGTGCTGTCCCTGGCCTCCAGTGCCTCCTCCACCT...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTCATGGCACTCACATTaGCAGAAAGCTGAGACGTCA +
Preference number: 2 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRSWHSH*QKAETS
Trigger: TGACGTCTCAGCTTTCTGCCAATGTGAGTGCCATGA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGGAAAGTACCACAGCCTaGTTAGAGGAGGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQESTTA*LEEVAS
Trigger: TGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTC...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGAGCTTTGGGGGAAAATaGCTCTTATGTTCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKSFGGK*LLCSLF
Trigger: AAACAGAGAACATAAGAGCCATTTTCCCCCAAAGCT...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACACTCCTTGTAGTCCCTaGAAGACTACTCATGAGAGG +
Preference number: 2 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNTPCSP*KTTHER
Trigger: CCTCTCATGAGTAGTCTTCCAGGGACTACAAGGAGT...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTACTGCTCCGCATGTCTaGAGCCTACTTCATAGGACC +
Preference number: 2 (lower is better)
Translates to: EGYQRALWIRGRLVRKGATAPHV*SLLHRT
Trigger: GGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGT...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCACCAGAAAATAGAGTaGAGCGCTCAACCATCAGAT +
Preference number: 2 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSHQKIE*SAQPSD
Trigger: ATCTGATGGTTGAGCGCTTCACTCTATTTTCTGGTG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR GCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCGTGACCCAGGCCATTTaGTTTGGTGGGTGTGGCACA +
Preference number: 2 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCVTQAI*FGGCGT
Trigger: TGTGCCACACCCACCAAAGCAAATGGCCTGGGTCAC...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTCTACCTTGGCAACTaGTTCCTCTCTCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLYLGN*FLSLQL
Trigger: AAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGGCAGCTCTCTACCTTaGCAACTGGTTCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPGSSLP*QLVPLS
Trigger: AGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGCCAAACTAGCCCCTaGAAAAGCAACCCAAGCATC +
Preference number: 2 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSQTSP*KSNPSI
Trigger: GATGCTTGGGTTGCTTTTCCAGGGGCTAGTTTGGCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAAGGTAGGATCTCTTTaGAAGGCAGGTATTGGCCAC +
Preference number: 2 (lower is better)
Translates to: APEGKPRLQYYLTRREHTKVGSL*KAGIGH
Trigger: GTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTTTCAGCACCATCCTTaGACACACAGCCTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWFQHHP*THSLFP
Trigger: TGGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGGTGGCCACTTTTTCCTaGGATGATTCCAGTTCCCTA +
Preference number: 2 (lower is better)
Translates to: RGESTTAWLEEVASFLPMVATFS*DDSSSL
Trigger: TAGGGAACTGGAATCATCCCAGGAAAAAGTGGCCAC...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGGGAGTCAGACCAGAATaGGAGTTAGGTTTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWGVRPE*ELGFSV
Trigger: TACTGAGAAACCTAACTCCCATTCTGGTCTGACTCC...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGVCEKI*GASCLP
Trigger: GGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGAC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTTCTCCCTCTACTTCTaGGCCAATGCTTCATGTCTC +
Preference number: 2 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVFSLYF*ANASCL
Trigger: GAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTG +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGTEAGN*ATQQNV
Trigger: CACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGATCAGAATAGTGCAGTaGAAGGCCAAACTGGCCACA +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWIRIVQ*KAKLAT
Trigger: TGTGGCCAGTTTGGCCTTTCACTGCACTATTCTGAT...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAGACTTGCCCATTCCTaGCAAGCAAGATTCCATAGT +
Preference number: 2 (lower is better)
Translates to: APEGKPRLQYYLTRREHTRLAHS*QARFHS
Trigger: ACTATGGAATCTTGCTTGTCAGGAATGGGCAAGTCT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAAGACGCATGCCCTTaGCGTCTCAGTCCAGGGGAT +
Preference number: 2 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHEDACP*RLSPGD
Trigger: ATCCCCTGGACTGAGACGTCAAGGGCATGCGTCTTC...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTTCTATCATAGAGCTGTaGAGAAGACGCATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: EGYQRALWIRGRLVRKGASIIEL*RRRMPL
Trigger: CAAGGGCATGCGTCTTCTTCACAGCTCTATGATAGA...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGTCAGCCCATCAGACATaGACTCATCCATACCTATTA +
Preference number: 2 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWSAHQT*THPYLL
Trigger: TAATAGGTATGGATGAGTTCATGTCTGATGGGCTGA...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCGGAGTCACGGAATCCTaGAGAGAGCTGTGGAACCTT +
Preference number: 2 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCGVTES*RELWNL
Trigger: AAGGTTCCACAGCTCTCTTCAGGATTCCGTGACTCC...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTGATGCCAGCGTTCTaGTGTCCGGGGGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLMPAF*CPGVTV
Trigger: CACTGTCACCCCCGGACAGCAGAACGCTGGCATCAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGGGCTGGAGAGCCAGTaGTCTGAAAGAGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: SKYLSNERTGIARPSRQWGLESQ*SERGEG
Trigger: CCCCTCTCCTCTTTCAGAGCACTGGCTCTCCAGCCC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAGCTTACCACGTGGATaGAGAAGCTTTTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSLPRG*RSFCEG
Trigger: CCCCTCACAAAAGCTTCTGCATCCACGTGGTAAGCT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCCTGTATGCTCTTCTGTaGTGCCTTTCCCCATCCAGG +
Preference number: 2 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCLYALL*CLSPSR
Trigger: CCTGGATGGGGAAAGGCAGCACAGAAGAGCATACAG...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTCTCCTCCTGGGGCTaGAGAGCCAGTGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHFSSWG*RASALK
Trigger: TTTCAGAGCACTGGCTCTCCAGCCCCAGGAGGAGAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACTCTACCTTGGCAACTaGTTCCTCTCTCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGLYLGN*FLSLQL
Trigger: AAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGGCAGCTCTCTACCTTaGCAACTGGTTCCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCGSSLP*QLVPLS
Trigger: AGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCCAAAGATAGTGGCATaGCAGGTGTCATGCCAATTG +
Preference number: 2 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVPKIVA*QVSCQL
Trigger: CAATTGGCATGACACCTGCCATGCCACTATCTTTGG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGAAGTCAAGGGAACTaGGTTCCTCTTCTCCCTCTA +
Preference number: 2 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGSQGN*VPLLPL
Trigger: TAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGTTAACATTTCCTGCTaGACTGTAAACTTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLVNISC*TVNLRA
Trigger: GGCCCTTAAGTTTACAGTCCAGCAGGAAATGTTAAC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGAGAGTAGAGGGTGGTaGATCCCAGGAAGAGAAATA +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWESRGW*IPGREI
Trigger: TATTTCTCTTCCTGGGATCCACCACCCTCTACTCTC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCGCTGAGACGTCAAGGTaGCCACTTTTTCCTGGGATG +
Preference number: 2 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLAETSR*PLFPGM
Trigger: CATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGC...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCCCAGCCTTGACAGCATaGTGGCTGACAGATTGCAGT +
Preference number: 2 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCPALTA*WLTDCS
Trigger: ACTGCAATCTGTCAGCCACCATGCTGTCAAGGCTGG...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTATTCTCCCTCCCTGTTaGGTCAACTCTAGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRILPPC*VNSSFH
Trigger: ATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAAT...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGTCTCATGGCTCCTACTaGCTTACAATTCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRSHGSY*LTILPP
Trigger: GGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGA...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp TTCTATCAAGATGGGGCTATACCTTCTCATGACAGAGGCTGGCAATaGAGCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: FYQDGAIPSHDRGWQ*SYPAERVLSKGKSR
Trigger: CCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCATCTTGATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp AATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAAGCAATaGGAGACCTGGCCTAAATGCAGCAGTCAGCTGAGAGTAGAGGGT +
Preference number: 2 (lower is better)
Translates to: NTTSLDGNTLSGGKQ*ETWPKCSSQLRVEG
Trigger: ACCCTCTACTCTCAGCTGACTGCTGCATTTAGGCCAGGTCTCCAATTGCTTTCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp GTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCAGTaGCCATATAACTGTGATTCCTTCATGAGAATGATCAATCCCCAC +
Preference number: 2 (lower is better)
Translates to: VPRGYSTMRRLSLLQ*PYNCDSFMRMINPH
Trigger: GTGGGGATTGATCATTCTCATGAAGGAATCACAGTTATATGGCAACTGCAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp CGGCAGAAGAGCAATCTGGAAGAGACCTCCAACTGCTTTTCCTTGTaGAAGCCCCTTTGTGTGCCAGGTAGTAATTTCCAAGGCATAAGG +
Preference number: 2 (lower is better)
Translates to: RQKSNLEETSNCFSL*KPLCVPGSNFQGIR
Trigger: CCTTATGCCTTGGAAATTACTACCTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTCCAGATTGCTCTTCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp CTGAGCAGTTTCCTTTCACCCACTGTGCAGGCAACATCTGTCTTCTaGACCTCAGGTCTTCTCTGGTTTGCTTCTCTACATCCTGCATGT +
Preference number: 2 (lower is better)
Translates to: LSSFLSPTVQATSVF*TSGLLWFASLHPAC
Trigger: ACATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTCAAGAAGACAGATGTTGCCTGCACAGTGGGTGAAAGGAAACTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHVCEKI*GASCLP
Trigger: GGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGAC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCA +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWWQPSC*CPLCHP
Trigger: TGGATGACATAGGGGACATCAACAAGACGGCTGCCA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCATCTCGTGGACATGTaGGGAAATGGAAAAACGGAA +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWHLVDM*GNGKTE
Trigger: TTCCGTTTTTCCATTTCCTCACATGTCCACGAGATG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTG +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHTEAGN*ATQQNV
Trigger: CACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGGTTGGGTGGAAGAGTaGTCCAGGTTGGTATGCCTA +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWGWVEE*SRLVCL
Trigger: TAGGCATACCAACCTGGATCACTCTTCCACCCAACC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGACTCACTTACTTCCATaGCCACCCTTGTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWTHLLP*PPLSQK
Trigger: TTTCTGTGACAAGGGTGGTCATGGAAGTAAGTGAGT...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGGTGTCATGCCAATTaGATGGCATCAGATTCTCCA +
Preference number: 2 (lower is better)
Translates to: TCALKREVKGTGFLFSLYRCHAN*MASDSP
Trigger: TGGAGAATCTGATGCCATGCAATTGGCATGACACCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGA +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCAWQVS*QLHGIR
Trigger: TCTGATGCCATGCAATTGGCATGACACCTGCCATGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCTACTTCTGAGCCAATaGTTCATGTCTCATATAAGC +
Preference number: 2 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLLLLSQ*FMSHIS
Trigger: GCTTATATGAGACATGAAGCATTGGCTCAGAAGTAG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAGCTTACCACGTGGATaGAGAAGCTTTTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSLPRG*RSFCEG
Trigger: CCCCTCACAAAAGCTTCTGCATCCACGTGGTAAGCT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCGATAGTCAAAATAACTaGCTTGATCTTTCCGTACTT +
Preference number: 2 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGDSQNN*LDLSVL
Trigger: AAGTACGGAAAGATCAAGGCAGTTATTTTGACTATC...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGAGGGCTAAGCAGTGGTaGTGCAGAAAGGCTAGCATT +
Preference number: 2 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKRAKQW*CRKASI
Trigger: AATGCTAGCCTTTCTGCAGCACCACTGCTTAGCCCT...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCACATGCTTCTTTTTCTaGGCTCCAGCCAGATCTCTG +
Preference number: 2 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPTCFFF*APARSL
Trigger: CAGAGATCTGGCTGGAGCCCAGAAAAAGAAGCATGT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCAACCCAAGCATCTCGTaGACATGTGAGGAAATGGAA +
Preference number: 2 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGINPSIS*TCEEME
Trigger: TTCCATTTCCTCACATGTCCACGAGATGCTTGGGTT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCAAAGAAAACCCACTTaGAAAAGCCAAACTAGCCCC +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWQRKPT*KSQTSP
Trigger: GGGGCTAGTTTGGCTTTTCCAAGTGGGTTTTCTTTG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCAAAGAAAACCCACTTaGAAAAGCCAAACTAGCCCC +
Preference number: 2 (lower is better)
Translates to: TCALKREVKGTGFLFSLYQRKPT*KSQTSP
Trigger: GGGGCTAGTTTGGCTTTTCCAAGTGGGTTTTCTTTG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGTCATGCCAATTGCATaGCATCAGATTCTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPVMPIA*HQILQR
Trigger: TCTTTGGAGAATCTGATGCCATGCAATTGGCATGAC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGCTCAGCCTAGAAGCTaGTCCCGCGGGGCTTTCAGA +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRAQPRS*SRGAFR
Trigger: TCTGAAAGCCCCGCGGGACCAGCTTCTAGGCTGAGC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCT +
Preference number: 2 (lower is better)
Translates to: APEGKPRLQYYLTRREHTMLQLS*LGIFTA
Trigger: AGCTGTGAAGATCCCTAACCAACTCAGCTGTAACAT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTCATGGTGGTATCCATaGTTACCAGAGAGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWSWWYP*LPESQE
Trigger: TTCTTGGCTCTCTGGTAACCATGGATACCACCATGA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGTCTTTCCGTACTTCATaGCACTCACATTGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: LPKETAQKRQLGMKESDQSFRTS*HSHWQK
Trigger: TTTCTGCCAATGTGAGTGCCATGAAGTACGGAAAGA...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTATTTTTGTGGTTTGGTaGCTTCTCAGGTTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCIFVVW*LLRLAA
Trigger: GGCTGCCAACCTGAGAAGTCACCAAACCACAAAAAT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTG +
Preference number: 2 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKTEAGN*ATQQNV
Trigger: CACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAGGCTCCATCTTAATTaGTCCCAGATCTTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWRLHLN*SQIFCP
Trigger: GGGGCAGAAGATCTGGGATCAATTAAGATGGAGCCT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCACATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACT +
Preference number: 2 (lower is better)
Translates to: WELGFSVVSWSLDRILMTTLAES*DVKVAT
Trigger: AGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGT...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTCATTTAGGAACTGCTaGAGTGTTTTGATGTTTTCT +
Preference number: 2 (lower is better)
Translates to: WAPARSLGEELLAVVMELSFRNC*SVLMFS
Trigger: AGAAAACATCAAAACACTGCAGCAGTTCCTAAATGA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCACATATCCTTGACCTaGAGAGTCCTGAAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCHISLT*RVLKLQ
Trigger: CTGAAGCTTCAGGACTCTGCAGGTCAAGGATATGTG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp CATCTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACTTGTTTCTGCCTCCATaGAGAACCACTGGTAATCAA +
Preference number: 2 (lower is better)
Translates to: HLPKETAQKRQLGMKESDLFLPP*RTTGNQ
Trigger: TTGATTACCAGTGGTTCTGCATGGAGGCAGAAACAA...GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGAAAACCAGAAACTACTaGGGAAATTGCAGACATGGT +
Preference number: 2 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQKTRNY*GNCRHG
Trigger: ACCATGTCTGCAATTTCCGCAGTAGTTTCTGGTTTT...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACGTTAGAGCCTCCTCTTaGACTTTTACTATAAATCTG +
Preference number: 2 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNVRASS*TFTINL
Trigger: CAGATTTATAGTAAAAGTGCAAGAGGAGGCTCTAAC...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTTCTCCTCCTGGGGCTaGAGAGCCAGTGCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: SKYLSNERTGIARPSRQWFSSWG*RASALK
Trigger: TTTCAGAGCACTGGCTCTCCAGCCCCAGGAGGAGAA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGGAAGTCAAGGGAACTaGGTTCCTCTTCTCCCTCTA +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWGSQGN*VPLLPL
Trigger: TAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGAACCCTGTCATCCATaGGAGCTTACCACGTGGATG +
Preference number: 2 (lower is better)
Translates to: THTQTSGPTLASNDLVFYEPCHP*ELTTWM
Trigger: CATCCACGTGGTAAGCTCCCATGGATGACAGGGTTC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CATCTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACGTAGTTTTCCTCCCTTaGCTGAACTTGTCTAACGAT +
Preference number: 2 (lower is better)
Translates to: HLPKETAQKRQLGMKESDVVFLP*LNLSND
Trigger: ATCGTTAGACAAGTTCAGCCAAGGGAGGAAAACTAC...GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTGACAAAAGTTTGGTTTaGAGTCACGGAATCCTGAAG +
Preference number: 2 (lower is better)
Translates to: EGYQRALWIRGRLVRKGADKSLV*SHGILK
Trigger: CTTCAGGATTCCGTGACTCCAAACCAAACTTTTGTC...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp CACGTGGATGCAGAAGCTTTTGTGAGGGGCAGCCCGGACCATCTTTaGGACTTAATATACCGATATGAAGATTCAGATGCATCTACTCCT +
Preference number: 2 (lower is better)
Translates to: HVDAEAFVRGSPDHL*DLIYRYEDSDASTP
Trigger: AGGAGTAGATGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCCCCTCACAAAAGCTTCTGCATCCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp ATTTCAGCACCATCCTTGGACACACAGCCTCTTCCCACCACAGAATaGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGCTCAT +
Preference number: 2 (lower is better)
Translates to: ISAPSLDTQPLPTTE*HMLQLSWLGIFTAH
Trigger: ATGAGCTGTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp ATTCGGCAGAAGAGCAATCTGGAAGAGACCTCCAACTGCTTTTCCTaGTTGAAGCCCCTTTGTGTGCCAGGTAGTAATTTCCAAGGCATA +
Preference number: 2 (lower is better)
Translates to: IRQKSNLEETSNCFS*LKPLCVPGSNFQGI
Trigger: TATGCCTTGGAAATTACTACCTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTCCAGATTGCTCTTCTGCCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp AGACAAAGGGGAAATCAAAGAAATTTTCTGGTGGGAACCAGCTTCTaGAATAATGAAGCCAGGTTGAGGGTAGGGCAGGTTTCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RQRGNQRNFLVGTSF*NNEARLRVGQVSRG
Trigger: GCCTCTGGAAACCTGCCCTACCCTCAACCTGGCTTCATTATTCAAGAAGCTGGTTCCCACCAGAAAATTTCTTTGATTTCCCCTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCA +
Preference number: 2 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKWQPSC*CPLCHP
Trigger: TGGATGACATAGGGGACATCAACAAGACGGCTGCCA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTTCTCCCTCTACTTCTaGGCCAATGCTTCATGTCTC +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGFSLYF*ANASCL
Trigger: GAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGCTATACCTTCTCATaGCAGAGGCTGGCAATTGAG +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGYTFS*QRLAIE
Trigger: CTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATACAAGGGGGCGTAGCTaGATGGAGGTTAACATTTCC +
Preference number: 2 (lower is better)
Translates to: THTQTSGPTLASNDLVFYTRGRS*MEVNIS
Trigger: GGAAATGTTAACCTCCATTCAGCTACGCCCCCTTGT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCACCAGAAAATAGAGTaGAGCGCTCAACCATCAGAT +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCHQKIE*SAQPSD
Trigger: ATCTGATGGTTGAGCGCTTCACTCTATTTTCTGGTG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTAGTATACACAGGTTaGATTTTCAACCGTCTTCGT +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLVYTG*IFNRLR
Trigger: ACGAAGACGGTTGAAAATTCAACCTGTGTATACTAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCGTTCTTCATAAAAGTTaGGGCTCAGAGAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLVLHKS*GSEKGK
Trigger: CTTCCCCTTCTCTGAGCCTCAACTTTTATGAAGAAC...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGA +
Preference number: 2 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWAWQVS*QLHGIR
Trigger: TCTGATGCCATGCAATTGGCATGACACCTGCCATGC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGAGGTTAACATTTCCTaGTGGACTGTAAACTTAAGG +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWEVNIS*WTVNLR
Trigger: CCTTAAGTTTACAGTCCAGCAGGAAATGTTAACCTC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGAGACCTGGCCTAAATaGAGCAGTCAGCTGAGAGTA +
Preference number: 2 (lower is better)
Translates to: THTQTSGPTLASNDLVFYETWPK*SSQLRV
Trigger: TACTCTCAGCTGACTGCTGCATTTAGGCCAGGTCTC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAACCCAAGCATCTCGTaGACATGTGAGGAAATGGAA +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCNPSIS*TCEEME
Trigger: TTCCATTTCCTCACATGTCCACGAGATGCTTGGGTT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCTCATGACAGAGGCTaGCAATTGAGCTACCCAGCA +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISHDRG*QLSYPA
Trigger: TGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCTTTTGTGCAAACACTTaGAAAGCTCCTGCAGATCCG +
Preference number: 2 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLFCANT*KAPADP
Trigger: CGGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAA...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACCATTCAGAATCTTGGTaGAGATTCTTCTACCTAATT +
Preference number: 2 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNHSESW*RFFYLI
Trigger: AATTAGGTAGAAGAATCTCCACCAAGATTCTGAATG...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp AGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTaGATAGGTATCCTCCCTTCAAGGCTACATCTTCTGGGTTACTAC +
Preference number: 2 (lower is better)
Translates to: RLNFQPSSCPCSFGI*IGILPSRLHLLGYY
Trigger: GTAGTAACCCAGAAGATGTAGCCTTGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp TTTAGTGTGCATCAGAATCACCAGGAGGGCTTATTAAAACGTGGATaGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGA +
Preference number: 2 (lower is better)
Translates to: FSVHQNHQEGLLKRG*PGPLIRVSDSADLG
Trigger: TCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACGTTTTAATAAGCCCTCCTGGTGATTCTGATGCACACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTCTCAGGGTTGCTTGTaGGAATCATTTAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGSQGCL*ESFRNC
Trigger: GCAGTTCCTAAATGATTCTCACAAGCAACCCTGAGA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCA +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRWQPSC*CPLCHP
Trigger: TGGATGACATAGGGGACATCAACAAGACGGCTGCCA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTCCTGTGTTAAATGTGTaGTTAGGACAATTCCCCCGC +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIPVLNV*LGQFPR
Trigger: GCGGGGGAATTGTCCTAATCACACATTTAACACAGG...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAGGTGTCATGCCAATTaGATGGCATCAGATTCTCCA +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWRCHAN*MASDSP
Trigger: TGGAGAATCTGATGCCATGCAATTGGCATGACACCT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACACCCAGCAGAACGTGTaGTCTCAAAAGGGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHTQQNV*SQKGSQ
Trigger: TTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAACCCAGCAGAACGTGTaGTCTCAAAAGGGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDATQQNV*SQKGSQ
Trigger: TTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGGAAAGGAGCAAATCTaGAAAGGTAGGATCTCTTTG +
Preference number: 2 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCGKEQI*KGRISL
Trigger: CAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGAGGTTAACATTTCCTaGTGGACTGTAAACTTAAGG +
Preference number: 2 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGEVNIS*WTVNLR
Trigger: CCTTAAGTTTACAGTCCAGCAGGAAATGTTAACCTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGTGGTGGCTGACAGATTaGAGTGTAAATGAATCAGAC +
Preference number: 2 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKWWLTD*SVNESD
Trigger: GTCTGATTCATTTACACTGCAATCTGTCAGCCACCA...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTACATGCTTCTTTTTCTaGGCTCCAGCCAGATCTCTG +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGITCFFF*APARSL
Trigger: CAGAGATCTGGCTGGAGCCCAGAAAAAGAAGCATGT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGACATGCTTCTTTTTCTaGGCTCCAGCCAGATCTCTG +
Preference number: 2 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWTCFFF*APARSL
Trigger: CAGAGATCTGGCTGGAGCCCAGAAAAAGAAGCATGT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCCAAAGATAGTGGCATaGCAGGTGTCATGCCAATTG +
Preference number: 2 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWPKIVA*QVSCQL
Trigger: CAATTGGCATGACACCTGCCATGCCACTATCTTTGG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCCAAAGATAGTGGCATaGCAGGTGTCATGCCAATTG +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHPKIVA*QVSCQL
Trigger: CAATTGGCATGACACCTGCCATGCCACTATCTTTGG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGTGAAAGGCCAAACTaGCCACAAGACAGAGGAATG +
Preference number: 2 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSSERPN*PQDRGM
Trigger: CATTCCTCTGTCTTGTGGCCAGTTTGGCCTTTCACT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTGGGATGATCTCACATaGATGTTCATCTCTTATATG +
Preference number: 2 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWWDDLT*MFISYM
Trigger: CATATAAGAGATGAACATCCATGTGAGATCATCCCA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTGGAAGGCAGGTATTaGCCACCAAGTCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHLEGRY*PPSQTP
Trigger: AGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAGACCTTCAAGGCAATaGGAAAGGAGCAAATCTGCA +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWRPSRQ*ERSKSA
Trigger: TGCAGATTTGCTCCTTTCCCATTGCCTTGAAGGTCT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAAGCCAAGAATCCCTTTaGGGTCGGAGGCAGTTGGAA +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRSQESL*GRRQLE
Trigger: TTCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGAGAGTAGAGGGTGGTaGATCCCAGGAAGAGAAATA +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIESRGW*IPGREI
Trigger: TATTTCTCTTCCTGGGATCCACCACCCTCTACTCTC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAAGCAATTGGAGACCTaGCCTAAATGCAGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: THTQTSGPTLASNDLVFYKQLET*PKCSSQ
Trigger: CTGACTGCTGCATTTAGGCCAGGTCTCCAATTGCTT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCTGGAGGAAAGCAATTaGAGACCTGGCCTAAATGCA +
Preference number: 2 (lower is better)
Translates to: THTQTSGPTLASNDLVFYLEESN*RPGLNA
Trigger: TGCATTTAGGCCAGGTCTCCAATTGCTTTCCTCCAG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGAACATGACAAAAGTTTaGTTTGGAGTCACGGAATCC +
Preference number: 2 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRNMTKV*FGVTES
Trigger: GGATTCCGTGACTCCAAACCAAACTTTTGTCATGTT...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp AATGAACATTTCATTGTAGGGTCTTCCCATGGACTTGTAGCAGATTaGTCTTCCCTGCCAGCCTCTACCTTCCCAATGGTTAGACATGAA +
Preference number: 2 (lower is better)
Translates to: NEHFIVGSSHGLVAD*SSLPASTFPMVRHE
Trigger: TTCATGTCTAACCATTGGGAAGGTAGAGGCTGGCAGGGAAGACAAATCTGCTACAAGTCCATGGGAAGACCCTACAATGAAATGTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp TTTTCGTTTCTAACAAGTTCCCAAAGGCTGCTGATGCTGCTGGTCTaGTGCCATACTTTGCGAACCACTGCTTTAAGGAATGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: FSFLTSSQRLLMLLV*CHTLRTTALRNEKP
Trigger: TGGTTTCTCATTCCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGACCAGCAGCATCAGCAGCCTTTGGGAACTTGTTAGAAACGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAATTTTTGTGGTTTGGTaGCTTCTCAGGTTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKIFVVW*LLRLAA
Trigger: GGCTGCCAACCTGAGAAGTCACCAAACCACAAAAAT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACATCTCGTGGACATGTaGGGAAATGGAAAAACGGAA +
Preference number: 2 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAHLVDM*GNGKTE
Trigger: TTCCGTTTTTCCATTTCCTCACATGTCCACGAGATG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGACTTGCCCATTCCTaGCAAGCAAGATTCCATAGT +
Preference number: 2 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSRLAHS*QARFHS
Trigger: ACTATGGAATCTTGCTTGTCAGGAATGGGCAAGTCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAACAGGGGTTGGCTTATaGAGTCGGCTTCTTAACTTT +
Preference number: 2 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSTGVGL*SRLLNF
Trigger: AAAGTTAAGAAGCCGACTTCATAAGCCAACCCCTGT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGA +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRAWQVS*QLHGIR
Trigger: TCTGATGCCATGCAATTGGCATGACACCTGCCATGC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACTCTACCTTGGCAACTaGTTCCTCTCTCTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRLYLGN*FLSLQL
Trigger: AAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAACCCAAGCATCTCGTaGACATGTGAGGAAATGGAA +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHNPSIS*TCEEME
Trigger: TTCCATTTCCTCACATGTCCACGAGATGCTTGGGTT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTCAAAGAAAACCCACTTaGAAAAGCCAAACTAGCCCC +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIQRKPT*KSQTSP
Trigger: GGGGCTAGTTTGGCTTTTCCAAGTGGGTTTTCTTTG...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTTTCTGGTTTTCCTCTaGTCCATGATAAAGCTCGGA +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGFLVFL*SMIKLG
Trigger: TCCGAGCTTTATCATGGACCAGAGGAAAACCAGAAA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGTCTTATATTCTGATTaGGATGATCTCACATGGATG +
Preference number: 2 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGVLYSD*DDLTWM
Trigger: CATCCATGTGAGATCATCCCAATCAGAATATAAGAC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATTGGAAGGCAGGTATTaGCCACCAAGTCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLEGRY*PPSQTP
Trigger: AGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGACCTTCAAGGCAATaGGAAAGGAGCAAATCTGCA +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRPSRQ*ERSKSA
Trigger: TGCAGATTTGCTCCTTTCCCATTGCCTTGAAGGTCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTTAACATTTCCTGCTaGACTGTAAACTTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVNISC*TVNLRA
Trigger: GGCCCTTAAGTTTACAGTCCAGCAGGAAATGTTAAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGGGGGCGTAGCTGAATaGAGGTTAACATTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRGGVAE*RLTFPA
Trigger: AGCAGGAAATGTTAACCTCCATTCAGCTACGCCCCC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCGCCTGCACAGTTACGTaGCATGAACAAAGACATGAA +
Preference number: 2 (lower is better)
Translates to: WELGFSVVSWSLDRILMTACTVT*HEQRHE
Trigger: TTCATGTCTTTGTTCATGCCACGTAACTGTGCAGGC...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGTGTTGTTTACAGCTTTaGGGGAAAATGGCTCTTATG +
Preference number: 2 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKCCLQL*GKMALM
Trigger: CATAAGAGCCATTTTCCCCCAAAGCTGTAAACAACA...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGCGGAAATTGCAGACATaGTTACTTTTGTGCAAACAC +
Preference number: 2 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKRKLQT*LLLCKH
Trigger: GTGTTTGCACAAAAGTAACCATGTCTGCAATTTCCG...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp CATTTGCTTTGGTGGGTGTGGCACAAGGGAGAGAAAAGATGGTTCTaGTTTATGTTACAATTCTTATGGGTCCCCCAAGAGTGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: HLLWWVWHKGEKRWF*FMLQFLWVPQEWEK
Trigger: TTTTTCCCACTCTTGGGGGACCCATAAGAATTGTAACATAAACAAGAACCATCTTTTCTCTCCCTTGTGCCACACCCACCAAAGCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAATGGCATTAAAAGTCTaGGCCTTGCCATGGAACTGG +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRMALKV*ALPWNW
Trigger: CCAGTTCCATGGCAAGGCTCAGACTTTTAATGCCAT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGAATCATTTAGGAACTaGTGCAGTGTTTTGATGTTT +
Preference number: 2 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGESFRN*CSVLMF
Trigger: AAACATCAAAACACTGCAGCAGTTCCTAAATGATTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAGGTGTCATGCCAATTaGATGGCATCAGATTCTCCA +
Preference number: 2 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRCHAN*MASDSP
Trigger: TGGAGAATCTGATGCCATGCAATTGGCATGACACCT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCTACTTCTGAGCCAATaGTTCATGTCTCATATAAGC +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGLLLSQ*FMSHIS
Trigger: GCTTATATGAGACATGAAGCATTGGCTCAGAAGTAG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGAAAGGAGCAAATCTaGAAAGGTAGGATCTCTTTG +
Preference number: 2 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGKEQI*KGRISL
Trigger: CAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGTCATGCCAATTGCATaGCATCAGATTCTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSVMPIA*HQILQR
Trigger: TCTTTGGAGAATCTGATGCCATGCAATTGGCATGAC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTTTCTGGTTTTCCTCTaGTCCATGATAAAGCTCGGA +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIFLVFL*SMIKLG
Trigger: TCCGAGCTTTATCATGGACCAGAGGAAAACCAGAAA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp GACTTAATATACCGATATGAAGATTCAGATGCATCTACTCCTCGGTaGGGTGGAAGAGTGATCCAGGTTGGTATGCCTATAGATTCTGAT +
Preference number: 2 (lower is better)
Translates to: DLIYRYEDSDASTPR*GGRVIQVGMPIDSD
Trigger: ATCAGAATCTATAGGCATACCAACCTGGATCACTCTTCCACCCAACCGAGGAGTAGATGCATCTGAATCTTCATATCGGTATATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp GGCAATAAAGAGTTCTTAAGGTCTCATGCAGATATCTTCTTGACCTaGATTTGGAGGACTGAGTCCCCTTCAGTCAGGCAAATTTTACCT +
Preference number: 2 (lower is better)
Translates to: GNKEFLRSHADIFLT*IWRTESPSVRQILP
Trigger: AGGTAAAATTTGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATGAGACCTTAAGAACTCTTTATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATCTCAGGGTTGCTTGTaGGAATCATTTAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRSQGCL*ESFRNC
Trigger: GCAGTTCCTAAATGATTCTCACAAGCAACCCTGAGA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACATCTCGTGGACATGTaGGGAAATGGAAAAACGGAA +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRHLVDM*GNGKTE
Trigger: TTCCGTTTTTCCATTTCCTCACATGTCCACGAGATG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTGTGGCTCTCCCCATTaGTTGACATTAGATATTGAA +
Preference number: 2 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGICGSPH*LTLDIE
Trigger: TTCAATATCTAATGTCAACCAATGGGGAGAGCCACA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp AATCTGCCTTTAAGATGCAGAACCCACCGTGTCTGGGTGTTTAGTTaGTTCTCTCTTAGCCAAATGGAACTTCCTGTTCTAAGAAAAATC +
Preference number: 2 (lower is better)
Translates to: NLPLRCRTHRVWVFS*FSLSQMELPVLRKI
Trigger: GATTTTTCTTAGAACAGGAAGTTCCATTTGGCTAAGAGAGAACAAACTAAACACCCAGACACGGTGGGTTCTGCATCTTAAAGGCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGAATCATTTAGGAACTaGTGCAGTGTTTTGATGTTT +
Preference number: 2 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGESFRN*CSVLMF
Trigger: AAACATCAAAACACTGCAGCAGTTCCTAAATGATTC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCT +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRMLQLS*LGIFTA
Trigger: AGCTGTGAAGATCCCTAACCAACTCAGCTGTAACAT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp TGTGAATACTCATTTGTGAAAAATAGTAAGAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: CEYSFVKNSKSQLGY*DSVRHHQNSAVKGQ
Trigger: TTGGCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCTCTTACTATTTTTCACAAATGAGTATTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 90 bp AATAATGGCAATAAAGAGTTCTTAAGGTCTCATGCAGATATCTTCTaGACCTTGATTTGGAGGACTGAGTCCCCTTCAGTCAGGCAAATT +
Preference number: 2 (lower is better)
Translates to: NNGNKEFLRSHADIF*TLIWRTESPSVRQI
Trigger: AATTTGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATGAGACCTTAAGAACTCTTTATTGCCATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 90 bp ATAATTATAATCCATAACTGCTTTTGTCCATGGCCAATGGCAAGGTaGTTTCTGCCTCCATGCAGAACCACTGGTAATCAATCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: IIIIHNCFCPWPMAR*FLPPCRTTGNQSSS
Trigger: AGAAGAAGATTGATTACCAGTGGTTCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGTTATGGATTATAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATGGGATGATCTCACATaGATGTTCATCTCTTATATG +
Preference number: 2 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKWDDLT*MFISYM
Trigger: CATATAAGAGATGAACATCCATGTGAGATCATCCCA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGTCTTATATTCTGATTaGGATGATCTCACATGGATG +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRVLYSD*DDLTWM
Trigger: CATCCATGTGAGATCATCCCAATCAGAATATAAGAC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGAATCATTTAGGAACTaGTGCAGTGTTTTGATGTTT +
Preference number: 2 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRESFRN*CSVLMF
Trigger: AAACATCAAAACACTGCAGCAGTTCCTAAATGATTC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGTTCTCAGTAGTGTCGTaGTCACTAGACAGAATTCTA +
Preference number: 2 (lower is better)
Translates to: FKQTGTTYELRVWEKRIEFSVVS*SLDRIL
Trigger: TAGAATTCTGTCTAGTGACCACGACACTACTGAGAA...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 90 bp CCCGGCTCTCTCTTCATGATTGTTACCGCAACTATATACAACAGTTaGCTTTCCAGATTCAATTTCGCTTTTTCTACATTAGATATAAAA +
Preference number: 2 (lower is better)
Translates to: PGSLFMIVTATIYNS*LSRFNFAFSTLDIK
Trigger: TTTTATATCTAATGTAGAAAAAGCGAAATTGAATCTGGAAAGCAAACTGTTGTATATAGTTGCGGTAACAATCATGAAGAGAGAGCCGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR GCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGATTATAATCCATAACTaGTTTTGTCCATGGCCAATG +
Preference number: 2 (lower is better)
Translates to: FKQTGTTYELRVWEKRIEIIIHN*FCPWPM
Trigger: CATTGGCCATGGACAAAAGCAGTTATGGATTATAAT...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp AGGCCGCCTCGTGGGTGGGGATGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCGCAGTGGGACTCACCC +
Preference number: 3 (lower is better)
Translates to: RPPRGWGCCWSG*FLAWWPQWDSP
Trigger: GGGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp CTCGTGGGTGGGGATGCTGTTGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGGACTCACCCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: LVGGDAVGAGDS*RGGRSGTHPLP
Trigger: GGGCAAAGGGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp ATTTGGGAGCCGCTGTACAGCTCGAAGGCCGCCTCGTaGGTGGGGATGCTGTTGGAGCGGGTGATTCTTGGC +
Preference number: 3 (lower is better)
Translates to: IWEPLYSSKAAS*VGMLLERVILG
Trigger: GCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGCTGTACAGCGGCTCCCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGC +
Preference number: 3 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKWVGML*ERVILG
Trigger: GCCAAGAATCACCCGCTCCAACAGCATCCCCACCCA...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp GCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTaGCCGAATCATTCCCTTGGGTCTCTCGGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: AVNIVRGVSEGS*PNHSLGSLGQG
Trigger: TCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp GAATCATTCCCTTGGGTCTCTCGGCCAGGGACAGGGTaGTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: ESFPWVSRPGTG*SPFGSRCTARR
Trigger: CCTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAGACCCAAGGGAATGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp CTTTCCCAGGCCTCTCACCTTCTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGATGTCATATTCACCAG +
Preference number: 3 (lower is better)
Translates to: LSQASHLLLGRL*QVSQAGCHIHQ
Trigger: CTGGTGAATATGACATCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAGAAGGTGAGAGGCCTGGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTCAGGGTGCTCCCCATTaGGGAGCCGCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: SREHRPWGLGRILTESFPQGAPH*GAAVQL
Trigger: GAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTG...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAGGCTTCAGCCCAGCCTaGACAGCATGGTGGCTGACA +
Preference number: 3 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAGFSPA*TAWWLT
Trigger: TGTCAGCCACCATGCTGTCAAGGCTGGGCTGAAGCC...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp CATCTTCTGGGTTACTACCACCTTTCCCAGGATCTGTaGCCGGCAGTGCTCACTTCCAGGGCTAGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HLLGYYHLSQDL*PAVLTSRARLS
Trigger: GCTCAGCCTAGCCCTGGAAGTGAGCACTGCCGGCCACAGATCCTGGGAAAGGTGGTAGTAACCCAGAAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGAGCCAAGAATCCCTTaGGGGTCGGAGGCAGTTGGA +
Preference number: 3 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSEPRIP*GSEAVG
Trigger: TCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCTC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp TGGTTTGGTGACTTCTCAGGTTGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCAGAGGGCAGGAGCGGG +
Preference number: 3 (lower is better)
Translates to: WFGDFSGWQPSC*CPLCHPEGRSG
Trigger: CCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGCCAACCTGAGAAGTCACCAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp CAGAACCCTGTCATCCATGGGAGCTTACCACGTGGATaGAGAAGCTTTTGTGAGGGGCAGCCCGGACCATCT +
Preference number: 3 (lower is better)
Translates to: QNPVIHGSLPRG*RSFCEGQPGPS
Trigger: AGATGGTCCGGGCTGCCCCTCACAAAAGCTTCTGCATCCACGTGGTAAGCTCCCATGGATGACAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAGCAACATCTGTCTTCTaGACCTCAGGTCTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAATSVF*TSGLLW
Trigger: CCAGAGAAGACCTGAGGTCAAGAAGACAGATGTTGC...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp TCTCCCAGACATGAATTTCCTGGGGTGTGCAGGACGTaGCCCAGGCCATTTGCTTTGGTGGGTGTGGCACAA +
Preference number: 3 (lower is better)
Translates to: SPRHEFPGVCRT*PRPFALVGVAQ
Trigger: TTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAATTCATGTCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TGGTGGCCGCAGTGGGACTCACCCTTTGCCCATTGCTaGGATTACAGCCTTTCAGGGTTTCATACCCACAAG +
Preference number: 3 (lower is better)
Translates to: WWPQWDSPFAHC*DYSLSGFHTHK
Trigger: CTTGTGGGTATGAAACCCTGAAAGGCTGTAATCCCAGCAATGGGCAAAGGGTGAGTCCCACTGCGGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAACTGCTGCAGTGTTTaGATGTTTTCTGAACCCCTC +
Preference number: 3 (lower is better)
Translates to: AAVLLMSPMSSRGQERAANCCSV*MFSEPL
Trigger: GAGGGGTTCAGAAAACATCAAAACACTGCAGCAGTT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCATTTCAGCACCATCCTaGGACACACAGCCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSISAPS*DTQPLP
Trigger: GGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAAT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTGGCCAATGGCAAGGTaGTTTCTGCCTCCATGCAGA +
Preference number: 3 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRWPMAR*FLPPCR
Trigger: TCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp GTGGTGATGGAATTGGGAAGGGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCCCAGATCTCCCTCACA +
Preference number: 3 (lower is better)
Translates to: VVMELGRVCEKI*GASCLPQISLT
Trigger: TGTGAGGGAGATCTGGGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGACCCTTCCCAATTCCATCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTaGTTTGGTGGGTGTGGCACAAGGGAGAGAAAAGAT +
Preference number: 3 (lower is better)
Translates to: ISWGVQDVTQAI*FGGCGTRERKD
Trigger: ATCTTTTCTCTCCCTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp CTTCCTCCTCTGCTACTCCACTGCTTCACCCTTTCTTaGTTTGCAGCTGCTCCTTGTTCCCGGATTCTCCAG +
Preference number: 3 (lower is better)
Translates to: LPPLLLHCFTLS*FAAAPCSRILQ
Trigger: CTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTCTCTGGGGGAGGAGTaGTTGGCAGTGGTGATGGAA +
Preference number: 3 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISLGEE*LAVVME
Trigger: TTCCATCACCACTGCCAACAACTCCTCCCCCAGAGA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTTGGCAGCCGTCTTGTaGATGTCCCCTATGTCATCC +
Preference number: 3 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLAAVL*MSPMSS
Trigger: GGATGACATAGGGGACATCAACAAGACGGCTGCCAA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp CAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTaGTGGAATTGGGAAGGGTCTGTGAGAAAATCTGAG +
Preference number: 3 (lower is better)
Translates to: QPDLWGRSCWQW*WNWEGSVRKSE
Trigger: CTCAGATTTTCTCACAGACCCTTCCCAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp TCCTCTGCTACTCCACTGCTTCACCCTTTCTTGCTTTaGAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: SSATPLLHPFLL*SCSLFPDSPGL
Trigger: CAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp CATTATGCAAGACTCTCCTATGAGCTGAGTGGAGTGTaGATAAGGGGCCTTCCTGGGATACTGGAGCCCTAC +
Preference number: 3 (lower is better)
Translates to: HYARLSYELSGV*IRGLPGILEPY
Trigger: GTAGGGCTCCAGTATCCCAGGAAGGCCCCTTATCCACACTCCACTCAGCTCATAGGAGAGTCTTGCATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp GCTCTAGGAAATCGACGGCACTCTCATGGCTCCTACTaGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCT +
Preference number: 3 (lower is better)
Translates to: ALGNRRHSHGSY*LTILPPCWVNS
Trigger: AGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCGTCGATTTCCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp AGACTATCTGAGCAAGTTGGTGACCCTAGCAAGAAGTaGGCATACTCTGCGCAGCTCCTTCATGCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: RLSEQVGDPSKK*AYSAQLLHAEL
Trigger: GAGCTCTGCATGAAGGAGCTGCGCAGAGTATGCCCACTTCTTGCTAGGGTCACCAACTTGCTCAGATAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTTGGCAGCCGTCTTGTaGATGTCCCCTATGTCATCC +
Preference number: 3 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILAAVL*MSPMSS
Trigger: GGATGACATAGGGGACATCAACAAGACGGCTGCCAA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCAGGTGTCATGCCAATaGCATGGCATCAGATTCTCC +
Preference number: 3 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPQVSCQ*HGIRFS
Trigger: GGAGAATCTGATGCCATGCAATTGGCATGACACCTG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCAGGTGTCATGCCAATaGCATGGCATCAGATTCTCC +
Preference number: 3 (lower is better)
Translates to: APEGKPRLQYYLTRREHTQVSCQ*HGIRFS
Trigger: GGAGAATCTGATGCCATGCAATTGGCATGACACCTG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCAT +
Preference number: 3 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSQLGY*DSVRHH
Trigger: ATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGGACTTGTAGCAGATTaGTCTTCCCTGCCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWGLVAD*SSLPAS
Trigger: AGAGGCTGGCAGGGAAGACAAATCTGCTACAAGTCC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGAGCTCAGAAAAGGCAGTaGGGAATGAAGGAGTCAGAC +
Preference number: 3 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRAQKRQ*GMKESD
Trigger: GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGC...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACCTTTTGTGCAAACACTaGGAAAGCTCCTGCAGATCC +
Preference number: 3 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNLLCKH*ESSCRS
Trigger: GGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAAG...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCAGGTCTTCTCTGGTTaGCTTCTCTACATCCTGCAT +
Preference number: 3 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRQVFSG*LLYILH
Trigger: ATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAACTGCTGCAGTGTTTaGATGTTTTCTGAACCCCTC +
Preference number: 3 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLNCCSV*MFSEPL
Trigger: GAGGGGTTCAGAAAACATCAAAACACTGCAGCAGTT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCATCTACTCCTCGGTaGGGTGGAAGAGTGATCCAG +
Preference number: 3 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCASTPR*GGRVIQ
Trigger: CTGGATCACTCTTCCACCCAACCGAGGAGTAGATGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTATGTTACAGCTGAGTaGGTTAGGGATCTTCACAGC +
Preference number: 3 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLYVTAE*VRDLHS
Trigger: GCTGTGAAGATCCCTAACCAACTCAGCTGTAACATA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAACCTGAATTTCAGATaGTTTCTACCATCTGCCCAA +
Preference number: 3 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEANLNFR*FLPSAQ
Trigger: TTGGGCAGATGGTAGAAACAATCTGAAATTCAGGTT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAGGTACAACTTATGAATaGAGGGTTTGGGAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAGTTYE*RVWEKR
Trigger: TCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACC...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp ATGGGGCTATACCTTCTCATGACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTGTGCTCTCAAAAGGGA +
Preference number: 3 (lower is better)
Translates to: MGLYLLMTEAGN*ATQQNVCSQKG
Trigger: TCCCTTTTGAGAGCACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp GGAAGAACAATCCCCTCGTCTTCTATCATAGAGCTGTaGAGAAGACGCATGCCCTTGACGTCTCAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: GRTIPSSSIIEL*RRRMPLTSQSR
Trigger: CCTGGACTGAGACGTCAAGGGCATGCGTCTTCTTCACAGCTCTATGATAGAAGACGAGGGGATTGTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp TTGTCTCTTGATCCGAAGTTCTTTGGGTGTGGTTTCTaGGGCATTAAGGGCTCCCTGAATGACTGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LSLDPKFFGCGF*GIKGSLNDCLG
Trigger: GCCCAGGCAGTCATTCAGGGAGCCCTTAATGCCTCAGAAACCACACCCAAAGAACTTCGGATCAAGAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp CATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTaGGTCAACTCTAGTTTTCATCCACTGCTCCGCATG +
Preference number: 3 (lower is better)
Translates to: HGSYWLTILPPC*VNSSFHPLLRM
Trigger: CATGCGGAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TTCATGCAGAGCTCTAGGAAATCGACGGCACTCTCATaGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTG +
Preference number: 3 (lower is better)
Translates to: FMQSSRKSTALS*LLLAYNSPSLL
Trigger: CAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCGTCGATTTCCTAGAGCTCTGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TTCGCATCAGCATCCTTGCTGCTGCCGATGCTGGAATaGCTAGTGATGCTGTTGAGGCTTGAGATGCTATCT +
Preference number: 3 (lower is better)
Translates to: FASASLLLPMLE*LVMLLRLEMLS
Trigger: AGATAGCATCTCAAGCCTCAACAGCATCACTAGCCATTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGGCAGCTCTCTACCTaGGCAACTGGTTCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGQLST*ATGSSL
Trigger: GAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATGGCAGGAAGTAGACTaGCCCATTCCTGACAAGCAA +
Preference number: 3 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGWQEVD*PIPDKQ
Trigger: TTGCTTGTCAGGAATGGGCAAGTCTACTTCCTGCCA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGAGCCAAGAATCCCTTaGGGGTCGGAGGCAGTTGGA +
Preference number: 3 (lower is better)
Translates to: THTQTSGPTLASNDLVFYEPRIP*GSEAVG
Trigger: TCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCTC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATAGAAGACGCATGCCCTaGACGTCTCAGTCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHRRRMP*TSQSRG
Trigger: TCCCCTGGACTGAGACGTCAAGGGCATGCGTCTTCT...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGTCTTATGTTCTCTGTTaGCAACTCAGTCACAGGGGA +
Preference number: 3 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQSYVLC*QLSHRG
Trigger: TCCCCTGTGACTGAGTTGCAAACAGAGAACATAAGA...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACGTCTGGGTGTTTAGTTaGTTCTCTCTTAGCCAAATG +
Preference number: 3 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNVWVFS*FSLSQM
Trigger: CATTTGGCTAAGAGAGAACAAACTAAACACCCAGAC...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp AGGGTTTCTATGTGGATGCCATCCCAAGTGAGGATGTaGGGTGTCTGTGAGAAGCAGCAGGCTACCATTTCT +
Preference number: 3 (lower is better)
Translates to: RVSMWMPSQVRM*GVCEKQQATIS
Trigger: AGAAATGGTAGCCTGCTGCTTCTCACAGACACCTCACATCCTCACTTGGGATGGCATCCACATAGAAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp TGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATaGAGGAGTCAGACCAGAATGGGAGTTAGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: CPRRLLRKGSWE*RSQTRMGVRFL
Trigger: GAGAAACCTAACTCCCATTCTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp AGTGGAGGAGCTAAGGCCACTTGGTTTGGCATAGTTTaGCCTCTAGCTGGCCAACTGGCTGCAAGATGTATA +
Preference number: 3 (lower is better)
Translates to: SGGAKATWFGIV*PLAGQLAARCI
Trigger: TATACATCTTGCAGCCAGTTGGCCAGCTAGAGGTCAAACTATGCCAAACCAAGTGGCCTTAGCTCCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp GACCTCAGGTCTTCTCTGGTTTGCTTCTCTACATCCTaGATGTCTGCTTGTAGACTCCTTGTAGTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: DLRSSLVCFSTS*MSACRLLVVPG
Trigger: TCCAGGGACTACAAGGAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp GTTTGGCATAGTTTGACCTCTAGCTGGCCAACTGGCTaGAAGATGTATAGGCAAGGTAAAGGGAATGAGGCC +
Preference number: 3 (lower is better)
Translates to: VWHSLTSSWPTG*KMYRQGKGNEA
Trigger: GGCCTCATTCCCTTTACCTTGCCTATACATCTTGCAGCCAGTTGGCCAGCTAGAGGTCAAACTATGCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TATCAAGATGGGGCTATACCTTCTCATGACAGAGGCTaGCAATTGAGCTACCCAGCAGAACGTGTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: YQDGAIPSHDRG*QLSYPAERVLS
Trigger: TGAGAGCACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCATCTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 72 bp GGTGAATCACCTGAGGTCAGGAGCTCCAGCACAGCCTaGCCAACAAGGCAAAACTCCGTATCTACTAAAAAT +
Preference number: 3 (lower is better)
Translates to: GESPEVRSSSTA*PTRQNSVSTKN
Trigger: ATTTTTAGTAGATACGGAGTTTTGCCTTGTTGGCCAGGCTGTGCTGGAGCTCCTGACCTCAGGTGATTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp CTTGATATCATCTTCGTGTCTTCAGGCATAGAGAAATaGCAGAGGAGCAGTAAGACCCCACAGGAGATGGCC +
Preference number: 3 (lower is better)
Translates to: LDIIFVSSGIEK*QRSSKTPQEMA
Trigger: GGCCATCTCCTGTGGGGTCTTACTGCTCCTCTGCCATTTCTCTATGCCTGAAGACACGAAGATGATATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp TGTTTCATGAGGAGTGAAGGATACCAAAGGGCTCTCTaGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: CFMRSEGYQRAL*IRGRLVRKGAQ
Trigger: CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTCACTCCTCATGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp GGTCGTTCCTATTATTTTGGTTTAACTCCTGCATTGTaGAGTGGGCCGGCCCCCAAGGGACCAAATAATCTC +
Preference number: 3 (lower is better)
Translates to: GRSYYFGLTPAL*SGPAPKGPNNL
Trigger: GAGATTATTTGGTCCCTTGGGGGCCGGCCCACTCCACAATGCAGGAGTTAAACCAAAATAATAGGAACGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCTCTGGGGGAGGAGTaGTTGGCAGTGGTGATGGAA +
Preference number: 3 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASLGEE*LAVVME
Trigger: TTCCATCACCACTGCCAACAACTCCTCCCCCAGAGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGGGCAGCTCTCTACCTaGGCAACTGGTTCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKGQLST*ATGSSL
Trigger: GAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGAGAATGCTGTAGATTaGCTCCTTGCCATAAATTCT +
Preference number: 3 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSENAVD*LLAINS
Trigger: AGAATTTATGGCAAGGAGCAAATCTACAGCATTCTC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp GTAACTCTTCTATCAAGATGGGGCTATACCTTCTCATaGCAGAGGCTGGCAATTGAGCTACCCAGCAGAACG +
Preference number: 3 (lower is better)
Translates to: VTLLSRWGYTFS*QRLAIELPSRT
Trigger: CGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCATCTTGATAGAAGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp TTTCCGTACTTCATGGCACTCACATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACTTTTTCCTGGGATGAT +
Preference number: 3 (lower is better)
Translates to: FPYFMALTLAES*DVKVATFSWDD
Trigger: ATCATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGTGAGTGCCATGAAGTACGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp AGGGTTCTGACCCTCGGCAAAAATCTGCCTTTAAGATaGAGAACCCACCGTGTCTGGGTGTTTAGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: RVLTLGKNLPLR*RTHRVWVFSLF
Trigger: GAACAAACTAAACACCCAGACACGGTGGGTTCTGCATCTTAAAGGCAGATTTTTGCCGAGGGTCAGAACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp GGAGGCAATCCCTTTAGTCCAGTTAGAGCCTCCTCTTaGACTTTTACTATAAATCTGTCAAGGCCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: GGNPFSPVRASS*TFTINLSRPGL
Trigger: GAGCCCAGGCCTTGACAGATTTATAGTAAAAGTGCAAGAGGAGGCTCTAACTGGACTAAAGGGATTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTGGCAGCCGTCTTGTaGATGTCCCCTATGTCATCC +
Preference number: 3 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHLAAVL*MSPMSS
Trigger: GGATGACATAGGGGACATCAACAAGACGGCTGCCAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGGTTGGCAGCCGTCTaGTTGATGTCCCCTATGTCA +
Preference number: 3 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSRLAAV*LMSPMS
Trigger: TGACATAGGGGACATCAACAAGACGGCTGCCAACCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCAT +
Preference number: 3 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSQLGY*DSVRHH
Trigger: ATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCATGCAGATATCTTCTaGACCTTGATTTGGAGGACT +
Preference number: 3 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWHADIF*TLIWRT
Trigger: AGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGATGAGGAACTGCGCTaGGTGATCTGGGTCACTTCA +
Preference number: 3 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIDEELR*VIWVTS
Trigger: TGAAGTGACCCAGATCACCAAGCGCAGTTCCTCATC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCCTCACCCTTTGCCCATaGCTGGGATTACAGCCTTTC +
Preference number: 3 (lower is better)
Translates to: WELGFSVVSWSLDRILMTLTLCP*LGLQPF
Trigger: GAAAGGCTGTAATCCCAGCAATGGGCAAAGGGTGAG...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCAGTGGGACTCACCCTTaGCCCATTGCTGGGATTACA +
Preference number: 3 (lower is better)
Translates to: WELGFSVVSWSLDRILMTSGTHP*PIAGIT
Trigger: TGTAATCCCAGCAATGGGCAAAGGGTGAGTCCCACT...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGAGTCAAAATAACTGCCTaGATCTTTCCGTACTTCATG +
Preference number: 3 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRVKITA*IFPYFM
Trigger: CATGAAGTACGGAAAGATCAAGGCAGTTATTTTGAC...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCTCCCTTGGCTGAACTaGTCTAACGATAGTCAAAAT +
Preference number: 3 (lower is better)
Translates to: EGYQRALWIRGRLVRKGALPWLN*SNDSQN
Trigger: ATTTTGACTATCGTTAGACAAGTTCAGCCAAGGGAG...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTTTCTAGCTGGCTCCTaGGGTTTCAGCTACATTTCT +
Preference number: 3 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCFLAGS*GFSYIS
Trigger: AGAAATGTAGCTGAAACCCAAGGAGCCAGCTAGAAA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATGGCAGGAAGTAGACTaGCCCATTCCTGACAAGCAA +
Preference number: 3 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAWQEVD*PIPDKQ
Trigger: TTGCTTGTCAGGAATGGGCAAGTCTACTTCCTGCCA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGCTCATCACATATCCTaGACCTGCAGAGTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIAHHIS*TCRVLK
Trigger: CTTCAGGACTCTGCAGGTCAAGGATATGTGATGAGC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp TTCCCTGAAGGCTGTAAGGTTATTTTTGTGGTTTGGTaGCTTCTCAGGTTGGCAGCCGTCTTGTTGATGTCC +
Preference number: 3 (lower is better)
Translates to: FPEGCKVIFVVW*LLRLAAVLLMS
Trigger: GGACATCAACAAGACGGCTGCCAACCTGAGAAGTCACCAAACCACAAAAATAACCTTACAGCCTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp CAGCCCGGACCATCTTTTGGACTTAATATACCGATATaGAGATTCAGATGCATCTACTCCTCGGTTGGGTGG +
Preference number: 3 (lower is better)
Translates to: QPGPSFGLNIPI*RFRCIYSSVGW
Trigger: CCACCCAACCGAGGAGTAGATGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp AGCCCATTTTTCCATCCCATCACAGGGGTTGGCTTATaGAGTCGGCTTCTTAACTTTAGCTTAGTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: SPFFHPITGVGL*SRLLNFSLVSA
Trigger: GGCACTGACTAAGCTAAAGTTAAGAAGCCGACTTCATAAGCCAACCCCTGTGATGGGATGGAAAAATGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp GCAATCTGGAAGAGACCTCCAACTGCTTTTCCTTGTTaGAGCCCCTTTGTGTGCCAGGTAGTAATTTCCAAG +
Preference number: 3 (lower is better)
Translates to: AIWKRPPTAFPC*SPFVCQVVISK
Trigger: CTTGGAAATTACTACCTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTCCAGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp GATGGCCAGAGGATCCACCATCAGCCTTCTGGGGACTaGGGAGGTGATCTTAGTGGAATTATTTTATACTCA +
Preference number: 3 (lower is better)
Translates to: DGQRIHHQPSGD*GGDLSGIILYS
Trigger: TGAGTATAAAATAATTCCACTAAGATCACCTCCTCAGTCCCCAGAAGGCTGATGGTGGATCCTCTGGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 72 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGATTCTCCAAAGAAAAC +
Preference number: 3 (lower is better)
Translates to: PWMPKIVAWQVS*QLHGIRFSKEN
Trigger: GTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp AACTGGGTTCCTCTTCTCCCTCTACTTCTGAGCCAATaGTTCATGTCTCATATAAGCCCCATGGATGCCAAA +
Preference number: 3 (lower is better)
Translates to: NWVPLLPLLLSQ*FMSHISPMDAK
Trigger: TTTGGCATCCATGGGGCTTATATGAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAAGAGGAACCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp CTACTTAGGAATCTGAAGAGCAAACACTTAGGCCGGTaGTCATCACATATCCTTGACCTGCAGAGTCCTGAA +
Preference number: 3 (lower is better)
Translates to: LLRNLKSKHLGR*SSHILDLQSPE
Trigger: TTCAGGACTCTGCAGGTCAAGGATATGTGATGAGCACCGGCCTAAGTGTTTGCTCTTCAGATTCCTAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp ACTGAGTCCCCTTCAGTCAGGCAAATTTTACCTAAATaGAGGGTTTCTATGTGGATGCCATCCCAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: TESPSVRQILPK*RVSMWMPSQVR
Trigger: CCTCACTTGGGATGGCATCCACATAGAAACCCTGCATTTAGGTAAAATTTGCCTGACTGAAGGGGACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 72 bp ACATGGTTACTTTTGTGCAAACACTTGGAAAGCTCCTaGAGATCCGGCTCAGCTGTTGTTTACAGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: TWLLLCKHLESS*RSGSAVVYSFG
Trigger: CCCAAAGCTGTAAACAACAGCTGAGCCGGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAAGTAACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TGGGAAAGGAGCAAATCTGCAAAGGTAGGATCTCTTTaGAAGGCAGGTATTGGCCACCAAGTCAAACTCCTT +
Preference number: 3 (lower is better)
Translates to: WERSKSAKVGSL*KAGIGHQVKLL
Trigger: AAGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 72 bp GAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGAATaGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTA +
Preference number: 3 (lower is better)
Translates to: EKAVGNEGVRPE*ELGFSVVSWSL
Trigger: TAGTGACCACGACACTACTGAGAAACCTAACTCCCATTCTGGTCTGACTCCTTCATTCCCAACTGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACAGGTGTCATGCCAATaGCATGGCATCAGATTCTCC +
Preference number: 3 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKQVSCQ*HGIRFS
Trigger: GGAGAATCTGATGCCATGCAATTGGCATGACACCTG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCAT +
Preference number: 3 (lower is better)
Translates to: THTQTSGPTLASNDLVFYSQLGY*DSVRHH
Trigger: ATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAAAGGTAGGATCTCTTaGGAAGGCAGGTATTGGCCA +
Preference number: 3 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIKGRIS*EGRYWP
Trigger: TGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp ATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTaGAAGGCCAAACTGGCCACAAGACAGAGGAATGTT +
Preference number: 3 (lower is better)
Translates to: IWIQSGTIRIVQ*KAKLATRQRNV
Trigger: AACATTCCTCTGTCTTGTGGCCAGTTTGGCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp GGGTCACTTCAGCACTTATTCCCTGTGTTAAATGTGTaGTTAGGACAATTCCCCCGCCCTCTCCAAATAATG +
Preference number: 3 (lower is better)
Translates to: GSLQHLFPVLNV*LGQFPRPLQIM
Trigger: CATTATTTGGAGAGGGCGGGGGAATTGTCCTAATCACACATTTAACACAGGGAATAAGTGCTGAAGTGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 72 bp ACTGCTTTTGTCCATGGCCAATGGCAAGGTTGTTTCTaGCTCCATGCAGAACCACTGGTAATCAATCTTCTT +
Preference number: 3 (lower is better)
Translates to: TAFVHGQWQGCF*LHAEPLVINLL
Trigger: AAGAAGATTGATTACCAGTGGTTCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp AGCTCTCAACCTGAATTTCAGATTGTTTCTACCATCTaGCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAA +
Preference number: 3 (lower is better)
Translates to: SSQPEFQIVSTI*PRRLLRKGSWE
Trigger: TTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATGGTAGAAACAATCTGAAATTCAGGTTGAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp AACATCTGTCTTCTTGACCTCAGGTCTTCTCTGGTTTaGTTCTCTACATCCTGCATGTCTGCTTGTAGACTC +
Preference number: 3 (lower is better)
Translates to: NICLLDLRSSLV*FSTSCMSACRL
Trigger: GAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTCAAGAAGACAGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp CTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCTCATGGAATTAGCAGC +
Preference number: 3 (lower is better)
Translates to: LPTTELHMLQLS*LGIFTAHGISS
Trigger: GCTGCTAATTCCATGAGCTGTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CCA 72 bp GTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTaGCATTTTGATAGGTATCCTCCCTTCAAGGCTACA +
Preference number: 3 (lower is better)
Translates to: VEFSTVFVSLQL*HFDRYPPFKAT
Trigger: TGTAGCCTTGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp GGAAATTGCAGACATGGTTACTTTTGTGCAAACACTTaGAAAGCTCCTGCAGATCCGGCTCAGCTGTTGTTT +
Preference number: 3 (lower is better)
Translates to: GNCRHGYFCANT*KAPADPAQLLF
Trigger: AAACAACAGCTGAGCCGGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAAGTAACCATGTCTGCAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTTTCTAGCTGGCTCCTaGGGTTTCAGCTACATTTCT +
Preference number: 3 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIFLAGS*GFSYIS
Trigger: AGAAATGTAGCTGAAACCCAAGGAGCCAGCTAGAAA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGATATCTTCTTGACCTaGATTTGGAGGACTGAGTCC +
Preference number: 3 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSDIFLT*IWRTES
Trigger: GGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGGAAACATTCAGAATCTaGGTGGAGATTCTTCTACCT +
Preference number: 3 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKETFRI*VEILLP
Trigger: AGGTAGAAGAATCTCCACCAAGATTCTGAATGTTTC...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR TCA 72 bp ACACACGCAGACATCAGGTCCCACATTAGCCTCCAATaGCCTAGTATTTTATTTTTAGTGCCTAGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: THADIRSHISLQ*PSILFLVPRQG
Trigger: ACCTTGCCTAGGCACTAAAAATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp GGAATGAGAAACCAGGGGATCACTCACTTACTTCCATaGCCACCCTTGTCACAGAAAATTCTCCATGGTATA +
Preference number: 3 (lower is better)
Translates to: GMRNQGITHLLP*PPLSQKILHGI
Trigger: TATACCATGGAGAATTTTCTGTGACAAGGGTGGTCATGGAAGTAAGTGAGTGATCCCCTGGTTTCTCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp ACCAGGCTCTGCTCAAAAGCAGCCACCAGATTAGCCTaGAACAAACACAGAAAGAGATTGCTAAGTTGCATA +
Preference number: 3 (lower is better)
Translates to: TRLCSKAATRLA*NKHRKRLLSCI
Trigger: TATGCAACTTAGCAATCTCTTTCTGTGTTTGTTTCAGGCTAATCTGGTGGCTGCTTTTGAGCAGAGCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp ATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTaGAGCTTTGGCATTTTGATAGGTATCCTCCCTTCA +
Preference number: 3 (lower is better)
Translates to: IHRLNFQPSSCP*SFGILIGILPS
Trigger: TGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp GCTGCTGAAATGTGTTGGAAACATTCAGAATCTTGGTaGAGATTCTTCTACCTAATTCCGACGGATAGACCC +
Preference number: 3 (lower is better)
Translates to: AAEMCWKHSESW*RFFYLIPTDRP
Trigger: GGGTCTATCCGTCGGAATTAGGTAGAAGAATCTCCACCAAGATTCTGAATGTTTCCAACACATTTCAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TGTTCTAAGAAAAATCACCCTCTAAATTCAATTTCTTaGCTTCAGCCCAGCCTTGACAGCATGGTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: CSKKNHPLNSIS*LQPSLDSMVAD
Trigger: GTCAGCCACCATGCTGTCAAGGCTGGGCTGAAGCCAAGAAATTGAATTTAGAGGGTGATTTTTCTTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAACTGCTGCAGTGTTTaGATGTTTTCTGAACCCCTC +
Preference number: 3 (lower is better)
Translates to: SKYLSNERTGIARPSRQWNCCSV*MFSEPL
Trigger: GAGGGGTTCAGAAAACATCAAAACACTGCAGCAGTT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAGCCCGGACCATCTTTaGGACTTAATATACCGATAT +
Preference number: 3 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISPDHL*DLIYRY
Trigger: ATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp TGGTTAGACATGAAAAAGACATGGGTACTTAAGGATTaGCACAAAGACAGAGATAAGCACCGTAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: WLDMKKTWVLKD*HKDRDKHRRAA
Trigger: GGCAGCTCTACGGTGCTTATCTCTGTCTTTGTGTCAATCCTTAAGTACCCATGTCTTTTTCATGTCTAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR TCA 72 bp AAACCATCAAACTGGAAGGATCTAGTATACACAGGTTaGATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTG +
Preference number: 3 (lower is better)
Translates to: KPSNWKDLVYTG*IFNRLRVPAAL
Trigger: CAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACTAGATCCTTCCAGTTTGATGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 72 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTaGACAGTTACGTGGCATGAACAAAGACATGAACAC +
Preference number: 3 (lower is better)
Translates to: VTRQNSNDQSCA*TVTWHEQRHEH
Trigger: GTGTTCATGTCTTTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR GCA 72 bp TTCAGCCCAGCCTTGACAGCATGGTGGCTGACAGATTaGAGTGTAAATGAATCAGACATAATAATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: FSPALTAWWLTD*SVNESDIIMFS
Trigger: AGAGAACATTATTATGTCTGATTCATTTACACTGCAATCTGTCAGCCACCATGCTGTCAAGGCTGGGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp AGCCCTATAATTATAATCCATAACTGCTTTTGTCCATaGCCAATGGCAAGGTTGTTTCTGCCTCCATGCAGA +
Preference number: 3 (lower is better)
Translates to: SPIIIIHNCFCP*PMARLFLPPCR
Trigger: TCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGTTATGGATTATAATTATAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp AGACCAGAATGGGAGTTAGGTTTCTCAGTAGTGTCGTaGTCACTAGACAGAATTCTAATGACCAATCATGTG +
Preference number: 3 (lower is better)
Translates to: RPEWELGFSVVS*SLDRILMTNHV
Trigger: CACATGATTGGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCATTCTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGCTGTAAGGTTATTTTaGTGGTTTGGTGACTTCTCA +
Preference number: 3 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSAVRLF*WFGDFS
Trigger: TGAGAAGTCACCAAACCACAAAAATAACCTTACAGC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGCTGTAAGGTTATTTTaGTGGTTTGGTGACTTCTCA +
Preference number: 3 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHAVRLF*WFGDFS
Trigger: TGAGAAGTCACCAAACCACAAAAATAACCTTACAGC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGTACTCAGTAAGTACTaGTCAAATGAAAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAVLSKY*SNERTG
Trigger: CCCTGTTCTTTCATTTGACAAGTACTTACTGAGTAC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR GCA 72 bp CCTTGGCTGAACTTGTCTAACGATAGTCAAAATAACTaGCTTGATCTTTCCGTACTTCATGGCACTCACATT +
Preference number: 3 (lower is better)
Translates to: PWLNLSNDSQNN*LDLSVLHGTHI
Trigger: AATGTGAGTGCCATGAAGTACGGAAAGATCAAGGCAGTTATTTTGACTATCGTTAGACAAGTTCAGCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TTAAGGTCTCATGCAGATATCTTCTTGACCTTGATTTaGAGGACTGAGTCCCCTTCAGTCAGGCAAATTTTA +
Preference number: 3 (lower is better)
Translates to: LRSHADIFLTLI*RTESPSVRQIL
Trigger: TAAAATTTGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATGAGACCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp AAAAATCTGCCTTTAAGATGCAGAACCCACCGTGTCTaGGTGTTTAGTTTGTTCTCTCTTAGCCAAATGGAA +
Preference number: 3 (lower is better)
Translates to: KNLPLRCRTHRV*VFSLFSLSQME
Trigger: TTCCATTTGGCTAAGAGAGAACAAACTAAACACCCAGACACGGTGGGTTCTGCATCTTAAAGGCAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGCTGTAAGGTTATTTTaGTGGTTTGGTGACTTCTCA +
Preference number: 3 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKAVRLF*WFGDFS
Trigger: TGAGAAGTCACCAAACCACAAAAATAACCTTACAGC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR TCA 72 bp ATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGATTaGGAATTTTCGTTTCTAACAAGTTCCCAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: IRVSDSADLGWD*EFSFLTSSQRL
Trigger: CAGCCTTTGGGAACTTGTTAGAAACGAAAATTCTCAATCCCATCCCAGATCTGCTGAATCAGAAACTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 72 bp AAAGGCTCTAAGAGCCCTATAATTATAATCCATAACTaGTTTTGTCCATGGCCAATGGCAAGGTTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: KGSKSPIIIIHN*FCPWPMARLFL
Trigger: CAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGTTATGGATTATAATTATAGGGCTCTTAGAGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp AAAATAAAGTATGATGAGGAACTGCGCTTGGTGATCTaGGTCACTTCAGCACTTATTCCCTGTGTTAAATGT +
Preference number: 3 (lower is better)
Translates to: KIKYDEELRLVI*VTSALIPCVKC
Trigger: ACATTTAACACAGGGAATAAGTGCTGAAGTGACCCAGATCACCAAGCGCAGTTCCTCATCATACTTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp GTTCATAAGATCATTTTATTACTATGGCCTTCTCAGTaGAGCCATGAGCCAGAACTTGTGAGTAGTATATCC +
Preference number: 3 (lower is better)
Translates to: VHKIILLLWPSQ*SHEPELVSSIS
Trigger: GGATATACTACTCACAAGTTCTGGCTCATGGCTCCACTGAGAAGGCCATAGTAATAAAATGATCTTATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR GCA 72 bp AGTGCCCTTTATAACTCAAATAAAGGAGAGGGATGTTaGTGGGAGAACACGTTGTCATGGAAATACAAATTA +
Preference number: 3 (lower is better)
Translates to: SALYNSNKGEGC*WENTLSWKYKL
Trigger: TAATTTGTATTTCCATGACAACGTGTTCTCCCAGCAACATCCCTCTCCTTTATTTGAGTTATAAAGGGCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CCA 72 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTaGGAAAAGAGAATCGAGAGAATAACTAGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: FKQTGTTYELRV*EKRIERITSVV
Trigger: CACCACACTAGTTATTCTCTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CCA 72 bp TTGTTTATGTTACAATTCTTATGGGTCCCCCAAGAGTaGGAAAAAGTGCTTAACATGAGCTTCAAACAAACT +
Preference number: 3 (lower is better)
Translates to: LFMLQFLWVPQE*EKVLNMSFKQT
Trigger: AGTTTGTTTGAAGCTCATGTTAAGCACTTTTTCCCACTCTTGGGGGACCCATAAGAATTGTAACATAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp CTTGGGTCTCTCGGCCAGGGACAGGGTGCTCCCCATTaGGGAGCCGCTGTACAGCTCGAAGGCCGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: LGSLGQGQGAPH*GAAVQLEGRLV
Trigger: CACGAGGCGGCCTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAGACCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VGMLLERVILGVVAAVGLGAGDS*RGGRSG
Trigger: CCCACTGCGGCCACCACGCCAAGAATCACCCGCTCC...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp TACAGCTCGAAGGCCGCCTCGTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: YSSKAASWVGML*ERVILGVVAAV
Trigger: CACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGCTGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAGGACCGCTCTCGCCTaGCACCCGGGGACACCCGAA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAARTALA*HPGTPE
Trigger: TTCGGGTGTCCCCGGGTGTCAGGCGAGAGCGGTCCT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367295.5
CDS-3UTR CCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAGGCCGCCTCGTGGGTaGGGATGCTGTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEARPPRG*GCCWSG
Trigger: CCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTCTGCTTGCGCAGGTTaGAGGCGGGCGGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSACAG*RRAARR
Trigger: CCGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGCGCCTTGGCCTTGCTaGAGAGCAGCTCGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAAPWPC*RAARRP
Trigger: CGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAAGGCGCGCTCCTCCTaGCCCTTGGCAGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAKARSS*PLAEGT
Trigger: TGTCCCCTCTGCCAAGGGCCAGGAGGAGCGCGCCTT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGAGGGGACGAGCGGTTaGAGAGGCTGGACACGCTGC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAEGTSG*RGWTRC
Trigger: GCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGCCAGGGACAGCACTaGGCCGTGAACATCGTCCGT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGQGQH*AVNIVR
Trigger: ACGGACGATGTTCACGGCTCAGTGCTGTCCCTGGCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTGATTGACAGGGGCTaGAGTGGTCCGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALIDRG*SGPPTG
Trigger: GCCAGTGGGCGGACCACTCCAGCCCCTGTCAATCAG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTCGAAGGCCGCCTCGTaGGTGGGGATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAASKAAS*VGMLLE
Trigger: CTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGGTGAGGCAATGCTGTaGGGGCCCACGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLGEAML*GPTVGG
Trigger: CCCACCCACCGTGGGCCCTCACAGCATTGCCTCACC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTTCCAGGGCTAGGCTaGGCAGACATGCACCCATGC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALPGLG*ADMHPC
Trigger: GCATGGGTGCATGTCTGCTCAGCCTAGCCCTGGAAG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGTTGAGGGCAGGGTTCTaGCCCTCGGCAAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKLRAGF*PSAKIC
Trigger: GCAGATTTTTGCCGAGGGTCAGAACCCTGCCCTCAA...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGGCGCGTCACCAGCCTaGAGCCGCGGACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSGASPA*SRGLDW
Trigger: CCAGTCCAGTCCGCGGCTGCAGGCTGGTGACGCGCC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCCTCGGAGCTGACCAATaGCAGCAAACCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGMLLERVILGVVAAVGLLGADQ*QQTSWW
Trigger: CCACCAAGAGGTTTGCTGGCATTGGTCAGCTCCGAG...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELGAGDS*RGGRSG
Trigger: CCCACTGCGGCCACCACGCCAAGAATCACCCGCTCC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCCCGCGAGGAGCGCATaGACGATCCGCGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSPARSA*TIRASA
Trigger: TGCAGACGCGCGGATCGTCCATGCGCTCCTCGCGGG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGCTGGACACGCTGCGTaGGTTGGCATCATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAAGHAA*VGIIAV
Trigger: GACAGCGATGATGCCAACCCACGCAGCGTGTCCAGC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCAGGCCGGCCTGGCGTaGCCGCAGCTGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIQAGLA*PQLGRS
Trigger: GCTTCTCCCCAGCTGCGGCCACGCCAGGCCGGCCTG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCCGCCCCAGCAAACTTaGGAGAGCCTCTCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELPPQQT*ESLSPG
Trigger: TCCGGGGGAGAGGCTCTCCCAAGTTTGCTGGGGCGG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGCTCAGGGCTAAGCAGTaGTGCTGCAGAAAGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKLRAKQ*CCRKAS
Trigger: GCTAGCCTTTCTGCAGCACCACTGCTTAGCCCTGAG...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp GTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTaGGGTCTCTCGGCCAGGGACAGGGTGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: VGSRKDPDRIIP*GLSARDRVLPI
Trigger: AATGGGGAGCACCCTGTCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGTTTGCCTGCGACTTTaGGGGCACTCTGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAVCLRL*GHSGLC
Trigger: ACACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAAC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTATGCAGAAGCTTTTGTaGGGGGCAGCCCGGACCATC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAMQKLL*GAARTI
Trigger: GATGGTCCGGGCTGCCCCTCACAAAAGCTTCTGCAT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGGGTTATAGCACCATaGGGAGGCTCAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGVIAP*GGSAFC
Trigger: GCAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGCTCGGGGTCCACCTTaGGGAAGGCGCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSARGPP*GRRAPP
Trigger: AGGAGGAGCGCGCCTTCCTCAAGGTGGACCCCGAGC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTGGCCATAGCGCCATaGCAGAGGGGACGAGCGGTT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLAIAP*QRGRAV
Trigger: AACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCGGCCAGGGACAGGGTaGTCCCCATTTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRPGTG*SPFGSR
Trigger: GCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGCGGCCAGGGACAGGGTaGTCCCCATTTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQRPGTG*SPFGSR
Trigger: GCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCG...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTCCCCTTTGATGATGTaGTGCGGGGGCATCCTCACC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAASPLMM*CGGILT
Trigger: GGTGAGGATGCCCCCGCAGCACATCATCAAAGGGGA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCTCTGCCCAAGGAGACTaGTCAGAAAAGGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VGMLLERVILGVVAAVGLSAQGD*SEKAVG
Trigger: CCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGA...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGGCTAGTTCGGAAAGGTaGTCAGTGGAGGAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKASSER*SVEELR
Trigger: CCTTAGCTCCTCCACTGAGCACCTTTCCGAACTAGC...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGCAGGCTGCGGTACTaGATGTTAGAACGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGRLRY*MLERAP
Trigger: TGGAGCCCGTTCTAACATCCAGTACCGCAGCCTGCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAAGGAGGTTCTGGCCTaGTTCTCAGGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAKEVLA*FSGPAV
Trigger: CACTGCTGGGCCTGAGAACCAGGCCAGAACCTCCTT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTCGGCTTTCCCAGGTTaGGCGCGAGCGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSAFPG*ARAEPG
Trigger: CCCTGGCTCCGCTCGCGCCCAACCTGGGAAAGCCGA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTCCTGCATTGTGGAGTaGGCCGGCCCCCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRSCIVE*AGPQGT
Trigger: GGTCCCTTGGGGGCCGGCCCACTCCACAATGCAGGA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGAGCAGGGCCCTCGGTaGCATCAGTGCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYEQGPR*HQCPRR
Trigger: CCTCCGTGGGCACTGATGTCACCGAGGGCCCTGCTC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGCCGAAGGAATGGGTaGGTGCCAGGCCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGRRNG*VPGLGS
Trigger: GCTCCCTAGGCCTGGCACTCACCCATTCCTTCGGCC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTCGTTTCACGTGGCTaGTGCTGTAGCCATGGATGG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALVSRG*CCSHGW
Trigger: CCATCCATGGCTACAGCATCAGCCACGTGAAACGAG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGTGAGGCAATGCTGTaGGGGCCCACGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGEAML*GPTVGG
Trigger: CCCACCCACCGTGGGCCCTCACAGCATTGCCTCACC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAATEAGN*ATQQNV
Trigger: CACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGCTCGGGGTCCACCTTaGGGAAGGCGCGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYARGPP*GRRAPP
Trigger: AGGAGGAGCGCGCCTTCCTCAAGGTGGACCCCGAGC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAGAAGACGCATGCCCTTaGCGTCTCAGTCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAEDACP*RLSPGD
Trigger: ATCCCCTGGACTGAGACGTCAAGGGCATGCGTCTTC...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLLGRL*QVSQAG
Trigger: TCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLLGRL*QVSQAG
Trigger: TCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTCCGGCGCCCAGCGGTaGTTTTGCTTTGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSGAQR*FCFGVR
Trigger: CCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAGCTCCACCTCGGGCTaGACGCTCTTGACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSSSTSG*TLLTLL
Trigger: CAGCAGCGTCAAGAGCGTGCAGCCCGAGGTGGAGCT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGGTGACCCAGGCCATTTaGTTTGGTGGGTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKVTQAI*FGGCGT
Trigger: TGTGCCACACCCACCAAAGCAAATGGCCTGGGTCAC...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCCTAGTTTTCATCCACTaGTCCGCATGTCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VGMLLERVILGVVAAVGLLVFIH*SACLEP
Trigger: AGGCTCCAGACATGCGGAGCAGTGGATGAAAACTAG...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGCAGCTCTGCCAGCTTaGTGGCTGTGGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLAALPA*WLWGGL
Trigger: CAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCCTGAGAGGGGTTGGTaGCAGCTCTGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELPERGW*QLCQLG
Trigger: ACCAAGCTGGCAGAGCTGCCACCAACCCCTCTCAGG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCTCGAAGGCCGCCTCGTaGGTGGGGATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSSKAAS*VGMLLE
Trigger: CTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGA...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGACCTGCCCTGGAGTaGAGCCTGATGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGPALE*SLMRGL
Trigger: CAGGCCCCTCATCAGGCTCCACTCCAGGGCAGGTCC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTGTGAGGGCCCACGGTaGGTGGGGGCAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPCEGPR*VGAGGT
Trigger: TGTACCACCTGCCCCCACCCACCGTGGGCCCTCACA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTCCTGTTCTCCTCCTaGGGCTGGAGAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLLFSS*GWRASA
Trigger: AGCACTGGCTCTCCAGCCCCAGGAGGAGAACAGGAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCCGCCGGGCTGCCCTTaGCCTGGAAGAGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYPPGCP*PGRASA
Trigger: AGCACTCGCTCTTCCAGGCCAAGGGCAGCCCGGCGG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGCGCCTTGGCCTTGCTaGAGAGCAGCTCGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSAPWPC*RAARRP
Trigger: CGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGCTCCTCCTGGCCCTTaGCAGAGGGGACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYAPPGP*QRGQAQ
Trigger: CTGGGCCTGTCCCCTCTGCCAAGGGCCAGGAGGAGC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCGGAACCCTTTTGCTCTaGCTGGGCTTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGGTLLL*LGFLPA
Trigger: AGCGGGGAGAAAGCCCAGCCAGAGCAAAAGGGTTCC...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGTTTGCCTGCGACTTTaGGGGCACTCTGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELVCLRL*GHSGLC
Trigger: ACACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAAC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTTGACAGGGATGCCTaGGGACTTCTGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALDRDA*GLLDLA
Trigger: AGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCACGCTCATAGAACTTaGCTTGGCTGGCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSHAHRT*LGWPGQ
Trigger: CTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTCTTCGCTGTGGCCCTaGGAGGGGTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSSSLWP*EGLVAA
Trigger: AGCTGCCACCAACCCCTCTCAGGGCCACAGCGAAGA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGGGCCAGGGACAGCACTaGGCCGTGAACATCGTCCGT +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQGQGQH*AVNIVR
Trigger: ACGGACGATGTTCACGGCTCAGTGCTGTCCCTGGCC...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGTTTGGGTGTGGTTTCTaGGGCATTAAGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKFGCGF*GIKGSL
Trigger: CAGGGAGCCCTTAATGCCTCAGAAACCACACCCAAA...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGAGCAGGGCCCTCGGTaGCATCAGTGCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPEQGPR*HQCPRR
Trigger: CCTCCGTGGGCACTGATGTCACCGAGGGCCCTGCTC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGTTCCCAAAGGCTGCTaGTGCTGCTGGTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELVPKGC*CCWSCA
Trigger: GGCACAAGACCAGCAGCATCAGCAGCCTTTGGGAAC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTATCTCCAGGGAGCTGTaGGTCACCTGGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTISREL*VTWDPR
Trigger: GCGAGGGTCCCAGGTGACTCACAGCTCCCTGGAGAT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGCGGGAGATATGGCTaGGCTTGCTGGGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGGRYG*ACWGCA
Trigger: TGCGCAGCCCCAGCAAGCTCAGCCATATCTCCCGCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGGCGTAAGGCCTCCCTaGTTGGTGCTGAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSGVRPP*LVLRRL
Trigger: CAGTCTCCTCAGCACCAAGCAGGGAGGCCTTACGCC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCACATCAGCATCCTTGCTaGTGCCGATGCTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAHQHPC*CRCWNG
Trigger: GCCATTCCAGCATCGGCAGCAGCAAGGATGCTGATG...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTCGCATCAGCATCCTTaGTGCTGCCGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAASHQHP*CCRCWN
Trigger: ATTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTGATGCCAGCGTTCTaGTGTCCGGGGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLMPAF*CPGVTV
Trigger: CACTGTCACCCCCGGACAGCAGAACGCTGGCATCAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTGCTGCCCAGCATTCTaGCCGCGAGGAGCGCATGGA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPCCPAF*PRGAHG
Trigger: TCCATGCGCTCCTCGCGGGCAGAATGCTGGGCAGCA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCAGTCTGGGGGAGGCTaGTCTCTGTGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVQSGGG*SLWAQG
Trigger: GCCCTGAGCCCACAGAGAGCAGCCTCCCCCAGACTG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGTTTCTAGAAGGACCTaGAGCCTTTCCCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAVSRRT*SLSQSG
Trigger: CCCAGACTGGGAAAGGCTGCAGGTCCTTCTAGAAAC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCCCTCTGCTACTCCACTaGTTCACCCTTTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VGMLLERVILGVVAAVGLPLLLH*FTLSCF
Trigger: AAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGG...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGCTTGCTTGGTTCTTaGGAGTACTTTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGLLGS*EYFLGS
Trigger: GCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAATGTCGCCTCTCCTTaGTCTCCTCCTGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAANVASP*SPPGTE
Trigger: TTCAGTCCCAGGAGGAGACCAAGGAGAGGCGACATT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGGTGGAGGAGGCACTaGAGGCCAGGGACAGCACTG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRWRRH*RPGTAL
Trigger: CAGTGCTGTCCCTGGCCTCCAGTGCCTCCTCCACCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGAGGTGGAGGAGGCACTaGAGGCCAGGGACAGCACTG +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQRWRRH*RPGTAL
Trigger: CAGTGCTGTCCCTGGCCTCCAGTGCCTCCTCCACCT...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGTGTTGCCTGAAGGTTaGGGTCCAGGATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAVLPEG*GPGWFL
Trigger: GAGAAACCATCCTGGACCCCAACCTTCAGGCAACAC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGGGTCGGAGGCAGTTaGAATGAAAGAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGVGGS*NERRGS
Trigger: AGAACCCCTTCTTTCATTCCAACTGCCTCCGACCCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTCAGCTCAGCCGCGCTaGCCTTGGCCATGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSAQPR*PWPCRR
Trigger: GCGGCGGCATGGCCAAGGCCAGCGCGGCTGAGCTGA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCCTGCAGCCGCGGACTaGACTGGCCATAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYPAAAD*TGHSAM
Trigger: CATGGCGCTATGGCCAGTCCAGTCCGCGGCTGCAGG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTCCAGGCGGGAGATATaGCTGAGCTTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSRREI*LSLLGL
Trigger: CAGCCCCAGCAAGCTCAGCCATATCTCCCGCCTGGA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCGGATCCAGCCCGGCTaGAGAGGGCTGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPRIQPG*RGLLSG
Trigger: CCCCGAAAGCAGCCCTCTCCAGCCGGGCTGGATCCG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAGGGGCCAGCTGCCCTaGGAGAGGGGGCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPRGQLP*ERGPGF
Trigger: GAAACCTGGCCCCCTCTCCCAGGGCAGCTGGCCCCT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAGGGGTAAAGTGGTCTaGGCCCCTACATCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEARGKVV*APTSRV
Trigger: CACCCTAGATGTAGGGGCCCAGACCACTTTACCCCT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACCCCTTTTGCTCTGGCTaGGCTTTCTCCCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNPFCSG*AFSPLS
Trigger: GGAGAGCGGGGAGAAAGCCCAGCCAGAGCAAAAGGG...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCAGATCTGGGACCTTTaGAGCATGGGTGGTATCACT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAQIWDL*SMGGIT
Trigger: AGTGATACCACCCATGCTTCAAAGGTCCCAGATCTG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTTGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EGYQRALWIRGRLVRKGACCWSG*FLAWWP
Trigger: CGGCCACCACGCCAAGAATCACCCGCTCCAACAGCA...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCATCCTCTCCTCAGCTaGGGAGTAGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPHPLLS*GVGGGG
Trigger: GCCTCCTCCACCTACTCCTCAGCTGAGGAGAGGATG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGCATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELALAES*DVKVAT
Trigger: AGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAGTCAACTTTTCCACTaGCCTTGCTACAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAASQLFH*PCYSPG
Trigger: TCCTGGGCTGTAGCAAGGTCAGTGGAAAAGTTGACT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTTGGTCTTGTTGGGCTaGTGGCCAGGGAAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLVLLG*WPGKCV
Trigger: GACACACTTCCCTGGCCATCAGCCCAACAAGACCAA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTACAAGGGGGCGTAGCTaGATGGAGGTTAACATTTCC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAATRGRS*MEVNIS
Trigger: GGAAATGTTAACCTCCATTCAGCTACGCCCCCTTGT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCCACGCTGCCGGACTTaGAGACCTTCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIPRCRT*RPSAQP
Trigger: CGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCTGGCCATAGCGCCATaGCAGAGGGGACGAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILAIAP*QRGRAV
Trigger: AACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGCGGGAGATATGGCTaGGCTTGCTGGGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGGRYG*ACWGCA
Trigger: TGCGCAGCCCCAGCAAGCTCAGCCATATCTCCCGCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGGCTGTGGGGTGGCTTaGTTGGTTCTTGGGAGTACT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELGCGVA*LVLGST
Trigger: AGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCGAAGCTTCCGGATTTaGTCAGATTGCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAARSFRI*SDCILS
Trigger: GGAGAGGATGCAATCTGAGCAAATCCGGAAGCTTCG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTCCTCCTCCTCATTTaGATGGAACAGCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALLLLI*MEQPSV
Trigger: CACACTAGGCTGTTCCATGCAAATGAGGAGGAGGAG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCCCAGGAAGAATTCCTaGTGCTTCAAGTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAPRKNS*CFKSPL
Trigger: CAAAGGGGACTTGAAGCAGCAGGAATTCTTCCTGGG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGGACGAGGCGCCGGTaGTTCAGCAGGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRTRRR*FSRRLM
Trigger: CATAAGCCTCCTGCTGAAGCACCGGCGCCTCGTCCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGGGGTGACAGTGATTaGCGAACCCTTAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGGDSD*RTLKVL
Trigger: CAACACTTTAAGGGTTCGGCAATCACTGTCACCCCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTGATGCCAGCGTTCTaGTGTCCGGGGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLMPAF*CPGVTV
Trigger: CACTGTCACCCCCGGACAGCAGAACGCTGGCATCAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAAWQVS*QLHGIR
Trigger: TCTGATGCCATGCAATTGGCATGACACCTGCCATGC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGGAGGCTCAGCCTTCTaGAGTTGCCATATAACTGTG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAGGSAF*SCHITV
Trigger: CACAGTTATATGGCAACTGCAGAAGGCTGAGCCTCC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTTGGTGAGTGACTTCTaGTTGCGCAGGTTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLVSDF*LRRLEA
Trigger: CGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCCTTGGACCCCACCTTaGCTAAGCCTTTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTPWTPP*LSLWAP
Trigger: AGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGCCTGGAAGAGCGAGTaGTCCGACTTGGACAGCGTC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPAWKSE*SDLDSV
Trigger: GACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGCTCGTCGTCCGATTTaGCATCTTCGCTCACGGCCG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPARRPI*HLRSRP
Trigger: CGGCCGTGAGCGAAGATGGCAAATCGGACGACGAGC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCGATCCGCGCGTCCATaGAGGAGAAGCTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTRSARP*RRSSPQ
Trigger: CTGAGGAGAGCTTCTCCTGCATGGACGCGCGGATCG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCACACTTGGAAAGCTCCTaGAGATCCGGCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAHLESS*RSGSAV
Trigger: AACAGCTGAGCCGGATCTGCAGGAGCTTTCCAAGTG...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCACGTTTCTTCCTCCTCTaGTACTCCACTGCTTCACCC +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEARFFLL*YSTASP
Trigger: GGGTGAAGCAGTGGAGTAGCAGAGGAGGAAGAAACG...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCAAAGGATCCCGAAGTaGAGGGGCGAGCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTQRIPK*RGEQCP
Trigger: CGGGCATTGCTCGCCCCTCCACTTCGGGATCCTTTG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCCTGAGAGGGGTTGGTaGCAGCTCTGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTPERGW*QLCQLG
Trigger: ACCAAGCTGGCAGAGCTGCCACCAACCCCTCTCAGG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGGACGGGAGTACTGCTaGGGAAGGCACTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPGREYC*GRHWGG
Trigger: GCCTCCCCAGTGCCTTCCCCAGCAGTACTCCCGTCC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGACGGGAGTACTGCTaGGGAAGGCACTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGREYC*GRHWGG
Trigger: GCCTCCCCAGTGCCTTCCCCAGCAGTACTCCCGTCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCGTGAACATCGTCCGTaGGGTCTCGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRREHRP*GLGRIL
Trigger: CAGGATCCTTCCGAGACCCCACGGACGATGTTCACG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGACTCGGCCAAGCGATTaGTCAGGTAGGTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLTRPSD*SGRSCP
Trigger: CGGGCAAGACCTACCTGACCAATCGCTTGGCCGAGT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTCAGGAACCTCTCCTaGAGTTGTGGCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLRNLS*SCGSPH
Trigger: ATGGGGAGAGCCACAACTCCAGGAGAGGTTCCTGAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTACAGAAGGAGGTTCTaGCCTGGTTCTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELYRRRF*PGSQAQ
Trigger: CTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCACTGCACACCAGCCTaGGTGACAAAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSHCTPA*VTKRDS
Trigger: GGAGTCTCGCTTTGTCACCCAGGCTGGTGTGCAGTG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCTGCTTGCGCAGGTTaGAGGCGGGCGGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISACAG*RRAARR
Trigger: CCGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGGCTGCCCTTGGCCTaGAAGAGCGAGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGLPLA*KSECSD
Trigger: GTCGGAGCACTCGCTCTTCCAGGCCAAGGGCAGCCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGAGCTCTTTTGCGCCTTaGCCTTGCTGGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSSFAP*PCWRAA
Trigger: AGCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCTCCTCCTGGCCCTTaGCAGAGGGGACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCAPPGP*QRGQAQ
Trigger: CTGGGCCTGTCCCCTCTGCCAAGGGCCAGGAGGAGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAGCGGTTGGAGAGGCTaGACACGCTGCGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSGWRG*TRCVGW
Trigger: CCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCCGGGTCTGGCAGACTaGAGTCCCTTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSPGLAD*SPFLGF
Trigger: AAAGCCCAGGAAGGGACTCCAGTCTGCCAGACCCGG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGTTTGCCTGCGACTTTaGGGGCACTCTGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPVCLRL*GHSGLC
Trigger: ACACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAAC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGCTCCTGTGCAGGCCTaGGAGTTTGGGGTACATGCG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIAPVQA*EFGVHA
Trigger: CGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGCTCCTGTGCAGGCCTaGGAGTTTGGGGTACATGCG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYAPVQA*EFGVHA
Trigger: CGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGCCWSG*FLAWWP
Trigger: CGGCCACCACGCCAAGAATCACCCGCTCCAACAGCA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCATCCTCTCCTCAGCTaGGGAGTAGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYHPLLS*GVGGGG
Trigger: GCCTCCTCCACCTACTCCTCAGCTGAGGAGAGGATG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCATCCTCTCCTCAGCTaGGGAGTAGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVHPLLS*GVGGGG
Trigger: GCCTCCTCCACCTACTCCTCAGCTGAGGAGAGGATG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGTTGGTGGGCAGAGTTaGGGGCCTCCAAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWVGGQS*GPPSGC
Trigger: ACATCCGCTTGGAGGCCCTCAACTCTGCCCACCAAC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGCCGATGAGGAAGTCTaGGGTGCTGTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSADEEV*GAVLLK
Trigger: CTTGAGAAGCACAGCACCTCAGACTTCCTCATCGGC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAGAAGCAAGGGCCGATaGGGAAGTCTGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSRSKGR*GSLRCC
Trigger: ACAGCACCTCAGACTTCCTCATCGGCCCTTGCTTCT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGAAGCAAGGGCCGATaGGGAAGTCTGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLRSKGR*GSLRCC
Trigger: ACAGCACCTCAGACTTCCTCATCGGCCCTTGCTTCT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTTGGTCTTGTTGGGCTaGTGGCCAGGGAAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLLVLLG*WPGKCV
Trigger: GACACACTTCCCTGGCCATCAGCCCAACAAGACCAA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLTEAGN*ATQQNV
Trigger: CACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTATCAGAATAGTGCAGTaGAAGGCCAAACTGGCCACA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAIRIVQ*KAKLAT
Trigger: TGTGGCCAGTTTGGCCTTTCACTGCACTATTCTGAT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTTCCAGGGCTAGGCTaGGCAGACATGCACCCATGC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLPGLG*ADMHPC
Trigger: GCATGGGTGCATGTCTGCTCAGCCTAGCCCTGGAAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCGGGCTGCACGCTCTTaGCGCTGCTGCCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCRAARS*RCCPAF
Trigger: GAATGCTGGGCAGCAGCGTCAAGAGCGTGCAGCCCG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGACTCTGCTGATGGACTaGGGAGAAGCTAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLTLLMD*GEANGP
Trigger: GGGGCCATTAGCTTCTCCTCAGTCCATCAGCAGAGT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR TCA 90 bp CATCTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACGGGGTGTGCAGGACGTaGCCCAGGCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HLPKETAQKRQLGMKESDGVCRT*PRPFAL
Trigger: CAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCC...GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCTGGAAGACTACTCATaGGAGGCCCCAAGAACCCCT +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRLEDYS*EAPRTP
Trigger: AGGGGTTCTTGGGGCCTCTCATGAGTAGTCTTCCAG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGCGTAAGGCCTCCCTaGTTGGTGCTGAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGVRPP*LVLRRL
Trigger: CAGTCTCCTCAGCACCAAGCAGGGAGGCCTTACGCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGTTGGTGGCAGCTCTaGCAGCTTGGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGWWQL*QLGGCG
Trigger: CCCACAGCCACCAAGCTGGCAGAGCTGCCACCAACC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGACTCCATGCTCCTGTaGAGGCCTGAGAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPDSMLL*RPESLG
Trigger: CCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCGGCCAGGGACAGGGTaGTCCCCATTTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGRPGTG*SPFGSR
Trigger: GCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCATCAGCATCCTTGCTaGTGCCGATGCTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLHQHPC*CRCWNG
Trigger: GCCATTCCAGCATCGGCAGCAGCAAGGATGCTGATG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTGATGCCAGCGTTCTaGTGTCCGGGGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLMPAF*CPGVTV
Trigger: CACTGTCACCCCCGGACAGCAGAACGCTGGCATCAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGGGCTGGAGAGCCAGTaGTCTGAAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYGLESQ*SERGEG
Trigger: CCCCTCTCCTCTTTCAGAGCACTGGCTCTCCAGCCC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCACATATCCTTGACCTaGAGAGTCCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAHISLT*RVLKLQ
Trigger: CTGAAGCTTCAGGACTCTGCAGGTCAAGGATATGTG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGCCCAGCGGTGCTTTTaGTTTGGTGTCCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPAQRCF*FGVRIP
Trigger: TGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGCCTGGAAGAGCGAGTaGTCCGACTTGGACAGCGTC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWAWKSE*SDLDSV
Trigger: GACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGCCCAGAGCTCTTTTaGGCCTTGGCCTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGPELF*ALALLE
Trigger: CTCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGCGCGTCACCAGCCTaGAGCCGCGGACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGASPA*SRGLDW
Trigger: CCAGTCCAGTCCGCGGCTGCAGGCTGGTGACGCGCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGGAAGCCCACGAAGCTaGCCCCTCATCAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIGSPRS*PLIRLQ
Trigger: TTGGAGCCTGATGAGGGGGCAGCTTCGTGGGCTTCC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTGAAGTGGGCATACTCTaGGCAGCTCCTTCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPEVGIL*AAPSCR
Trigger: TCTGCATGAAGGAGCTGCGCAGAGTATGCCCACTTC...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGAGTTACAGCCACAGGTaGGGTCTTGCCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSYSHR*GLALLQ
Trigger: CTGAAGAAGGGCAAGACCCCACCTGTGGCTGTAACT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCCTGAGAGGGGTTGGTaGCAGCTCTGCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVPERGW*QLCQLG
Trigger: ACCAAGCTGGCAGAGCTGCCACCAACCCCTCTCAGG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCATGGGTGGTATCACTaGATGATGGTAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAHGWYH*MMVDPD
Trigger: GTCTGGATCTACCATCATCCAGTGATACCACCCATG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTGCTGGGGAAGGCACTaGGGAGGCTCATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTCWGRH*GGSLAS
Trigger: AGATGCCAATGAGCCTCCCCAGTGCCTTCCCCAGCA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTTGCACTCAGAGACATaGGAAGTGCAGGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLHSET*EVQGEK
Trigger: CTTCTCCCCCTGCACTTCCCATGTCTCTGAGTGCAA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGCTGAGACGTCAAGGTaGCCACTTTTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELAETSR*PLFPGM
Trigger: CATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTCCTCCTCATTTGCATaGAACAGCCTAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSSSFA*NSLVWG
Trigger: CCCCCACACTAGGCTGTTCCATGCAAATGAGGAGGA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCCCGGTCTATCTGGTTaGCTAGGTTGGAAAGATACA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAPGLSG*LGWKDT
Trigger: TGTATCTTTCCAACCTAGCCAACCAGATAGACCGGG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGGCAGCTCTCTACCTTaGCAACTGGTTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELGSSLP*QLVPLS
Trigger: AGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTACTCCTCGGTTGGGTaGAAGAGTGATCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELYSSVG*KSDPGW
Trigger: CCAACCTGGATCACTCTTCCACCCAACCGAGGAGTA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCAAGGCTACATCTTCTaGGTTACTACCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAQGYIF*VTTTFP
Trigger: GGGAAAGGTGGTAGTAACCCAGAAGATGTAGCCTTG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGAGCTGAGTGGAGTGTaGATAAGGGGCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTELSGV*IRGLPG
Trigger: CCCAGGAAGGCCCCTTATCCACACTCCACTCAGCTC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTCAGCTCAGCCGCGCTaGCCTTGGCCATGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSAQPR*PWPCRR
Trigger: GCGGCGGCATGGCCAAGGCCAGCGCGGCTGAGCTGA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCCTTGCCTAAGCCTTTaGGCGCCTTGGCCATATCGT +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSPCLSL*APWPYR
Trigger: ACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGACTTGGACAGCGTCTTaGACATCAGCGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELTWTAS*TSAELH
Trigger: GTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGCGAGTGCTCCGACTTaGACAGCGTCTTGGACATCA +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLASAPT*TASWTS
Trigger: TGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTCGGCTTTCCCAGGTTaGGCGCGAGCGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGSAFPG*ARAEPG
Trigger: CCCTGGCTCCGCTCGCGCCCAACCTGGGAAAGCCGA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGCTCTTTTGCGCCTTaGCCTTGCTGGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSSFAP*PCWRAA
Trigger: AGCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTCTGGGTCCAGCATCTaGCTGAAGAGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSGSSI*LKSSCS
Trigger: GGAGCAGCTGCTCTTCAGCCAGATGCTGGACCCAGA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCACACGCTGCGTGGGTTaGCATCATCGCTGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSTRCVG*HHRCRS
Trigger: GCTACGACAGCGATGATGCCAACCCACGCAGCGTGT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGGCTGCGCATGGGCATaGTGTGGGAGTAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCGCAWA*CGSSGP
Trigger: GGGCCCACTACTCCCACACCATGCCCATGCGCAGCC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTGGCGTGGCCGCAGCTaGGGAGAAGCGCCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWWRGRS*GEAPGV
Trigger: TACACCGGGCGCTTCTCCCCAGCTGCGGCCACGCCA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGAGGCTGCTCTCTGTaGGCTCAGGGCCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGGCSL*AQGQAG
Trigger: GCCGGCCTGGCCCTGAGCCCACAGAGAGCAGCCTCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTTTTCCTGGGCAGCTTaGAGGCTTCCGACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPFSWAA*RLPTFR
Trigger: CCGGAAGGTCGGAAGCCTCCAAGCTGCCCAGGAAAA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCCCGCGAGGAGCGCATaGACGATCCGCGCGTCCATG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHPARSA*TIRASM
Trigger: CATGGACGCGCGGATCGTCCATGCGCTCCTCGCGGG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGTTGCTTTGGTGGGTGTaGCACAAGGGAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKLLWWV*HKGEKR
Trigger: TCTTTTCTCTCCCTTGTGCCACACCCACCAAAGCAA...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTCCAGCCTTGACAGCATaGTGGCTGACAGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPPALTA*WLTDCS
Trigger: ACTGCAATCTGTCAGCCACCATGCTGTCAAGGCTGG...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGATTAACTCCTGCATTGTaGAGTGGGCCGGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRLTPAL*SGPAPK
Trigger: CTTGGGGGCCGGCCCACTCCACAATGCAGGAGTTAA...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGCACTCTGGGCTGTGTaGGTGATGGGGGAAGTTACA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPALWAV*VMGEVT
Trigger: TGTAACTTCCCCCATCACTCACACAGCCCAGAGTGC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGTGTTCCGATCCCGCTaGTTACTGTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSVFRSR*LLSSCP
Trigger: TGGGCAACTGGACAGTAATCAGCGGGATCGGAACAC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGTCTCCTCCTGGGACTaGAGCTGGTACCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPVSSWD*SWYLSP
Trigger: AGGGCTCAGGTACCAGCTTCAGTCCCAGGAGGAGAC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGTCTCGGAAGGATCCTaGCCGAATCATTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTVSEGS*PNHSLG
Trigger: CCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGAC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGAGCAGGGCCCTCGGTaGCATCAGTGCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWEQGPR*HQCPRR
Trigger: CCTCCGTGGGCACTGATGTCACCGAGGGCCCTGCTC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGTTGGTGGGCAGAGTTaGGGGCCTCCAAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPVGGQS*GPPSGC
Trigger: ACATCCGCTTGGAGGCCCTCAACTCTGCCCACCAAC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGGCCGAAGGAATGGGTaGGTGCCAGGCCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHGRRNG*VPGLGS
Trigger: GCTCCCTAGGCCTGGCACTCACCCATTCCTTCGGCC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGATGCCATCCATGGGTaGCAGGTCTGTGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPDAIHG*QVCVCK
Trigger: CTTGCAGACACAGACCTGTCACCCATGGATGGCATC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGATTGATGTCGCTGTCTaGCTCTACCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELIDVAV*LYQLPP
Trigger: AGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAAT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGCCGATGAGGAAGTCTaGGGTGCTGTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPADEEV*GAVLLK
Trigger: CTTGAGAAGCACAGCACCTCAGACTTCCTCATCGGC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGTGAGGCAATGCTGTaGGGGCCCACGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGEAML*GPTVGG
Trigger: CCCACCCACCGTGGGCCCTCACAGCATTGCCTCACC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTVCEKI*GASCLP
Trigger: GGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGAC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAGACTTGCCCATTCCTaGCAAGCAAGATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAARLAHS*QARFHS
Trigger: ACTATGGAATCTTGCTTGTCAGGAATGGGCAAGTCT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGATGCAGAAGCTTTTGTaGGGGGCAGCCCGGACCATC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVMQKLL*GAARTI
Trigger: GATGGTCCGGGCTGCCCCTCACAAAAGCTTCTGCAT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGGGGTTATAGCACCATaGGGAGGCTCAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYGVIAP*GGSAFC
Trigger: GCAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCCACGCTGCCGGACTTaGAGACCTTCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCPRCRT*RPSAQP
Trigger: CGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGGCCAGGGACAGCACTaGGCCGTGAACTATGTTGGT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYGQGQH*AVNYVG
Trigger: ACCAACATAGTTCACGGCTCAGTGCTGTCCCTGGCC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR TCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGAAGCTTCCGGATTTGTaGGGAGTAGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQKLPDL*GVGGGG
Trigger: GCCTCCTCCACCTACTCCTCACAAATCCGGAAGCTT...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAAAGGCAGTTGGGAATaGAGGAGTCAGACCAGAATG +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAKGSWE*RSQTRM
Trigger: CATTCTGGTCTGACTCCTTCATTCCCAACTGCCTTT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGAGGCTCCTGGAGACTTaGGATCTAAAACCTATCAAC +
Preference number: 4 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKRLLET*DLKPIN
Trigger: GTTGATAGGTTTTAGATCTCAAGTCTCCAGGAGCCT...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATGGGGTCAATGCTGCTaGTCACAGGGCGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGWGQCC*SQGEVH
Trigger: GTGGACCTCGCCCTGTGAGCAGCAGCATTGACCCCA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGAGACTGGGGTCAATaGTGCTGCTCACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGDWGQ*CCSQGE
Trigger: CTCGCCCTGTGAGCAGCAGCATTGACCCCAGTCTCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGGCTGTGGGGTGGCTTaGTTGGTTCTTGGGAGTACT +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPGCGVA*LVLGST
Trigger: AGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTCTGGAGGGACTCCATaGTCCTGTGCAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISGGTP*SCAGLR
Trigger: TCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCGGATTTGCTCAGATTaGATCCTCTCCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELRICSD*ILSSAE
Trigger: CTCAGCTGAGGAGAGGATGCAATCTGAGCAAATCCG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCATCAGCATCCTTGCTaGTGCCGATGCTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPHQHPC*CRCWNG
Trigger: GCCATTCCAGCATCGGCAGCAGCAAGGATGCTGATG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTCCTCCTCCTCATTTaGATGGAACAGCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLLLLI*MEQPSV
Trigger: CACACTAGGCTGTTCCATGCAAATGAGGAGGAGGAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAAACACTTAGGCCGGTaGTCATCACATATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAKHLGR*SSHILD
Trigger: GTCAAGGATATGTGATGAGCACCGGCCTAAGTGTTT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCCCAGCCCGCGGCCTaGCTGCCTGTCAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSQPAA*LPVSPV
Trigger: CACGGGACTGACAGGCAGGCAGGCCGCGGGCTGGGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTTGGTGAGTGACTTCTaGTTGCGCAGGTTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLVSDF*LRRLEA
Trigger: CGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCCGGCTGGAGAGGGCTaGTTTCGGGGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWPAGEG*FRGCPG
Trigger: CCCAGGACAACCCCGAAAGCAGCCCTCTCCAGCCGG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTTGGCAAGGTTGTTTCTaGCTCCATGCAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPWQGCF*LHAEPL
Trigger: CAGTGGTTCTGCATGGAGGCAGAAACAACCTTGCCA...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTATGCTCTTCTGTGCTaGCTTTCCCCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNYALLC*LSPSRG
Trigger: TCCCCTGGATGGGGAAAGGCAGCACAGAAGAGCATA...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACAAAGGATCCCGAAGTaGAGGGGCGAGCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGQRIPK*RGEQCP
Trigger: CGGGCATTGCTCGCCCCTCCACTTCGGGATCCTTTG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTTGGTGGCTGTGGGGTaGCTTGCTTGGTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLVAVG*LAWFLG
Trigger: TCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTTGGTGGCTGTGGGGTaGCTTGCTTGGTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLVAVG*LAWFLG
Trigger: TCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAGGCTCATTGGCATCTaGAGGGACTCCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSRLIGI*RDSMLL
Trigger: CAGGAGCATGGAGTCCCTCCAGATGCCAATGAGCCT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGAAGGCAGCTCTGACTaGTCATCGGATTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSEGSSD*SSDSGS
Trigger: GCTGCCTGAATCCGATGACCAGTCAGAGCTGCCTTC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAGGCCGCCTCGTGGGTaGGGATGCTGTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIRPPRG*GCCWSG
Trigger: CCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCTCGAAGGCCGCCTCGTaGGTGGGGATGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLSKAAS*VGMLLE
Trigger: CTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGA...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAGGGTGCTCCCCATTTaGGAGCCGCTGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPRVLPI*EPLYSS
Trigger: CGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGCTGAGACGTCAAGGTaGCCACTTTTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSAETSR*PLFPGM
Trigger: CATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGACCTGCCCTGGAGTaGAGCCTGATGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGPALE*SLMRGL
Trigger: CAGGCCCCTCATCAGGCTCCACTCCAGGGCAGGTCC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGAACCAGGAAGCCATTaGCTGGCTCCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTEPGSH*LAPRCW
Trigger: CCAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCCGGACCCATTCCACTaGGTCCTCCCAAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWPDPFH*VLPSSF
Trigger: AAAGCTGCTTGGGAGGACCCAGTGGAATGGGTCCGG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTTCTCCTCCTGGGGCTaGAGAGCCAGTGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSFSSWG*RASALK
Trigger: TTTCAGAGCACTGGCTCTCCAGCCCCAGGAGGAGAA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGAGCCAAACTAGCCCCTaGAAAAGCAACCCAAGCATC +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSQTSP*KSNPSI
Trigger: GATGCTTGGGTTGCTTTTCCAGGGGCTAGTTTGGCT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCATGGCAGAAGGCACTaGCTGGGCAGCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSHGRRH*LGSTRK
Trigger: TTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGCCATG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCCTCTCCTGGAGTTGTaGCTCTCCCCATTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSPLLEL*LSPLVD
Trigger: GTCAACCAATGGGGAGAGCCACAACTCCAGGAGAGG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCTCAGGAACCTCTCCTaGAGTTGTGGCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTLRNLS*SCGSPH
Trigger: ATGGGGAGAGCCACAACTCCAGGAGAGGTTCCTGAG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCTTTCCCAGGATCTGTaGCCGGCAGTGCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILSQDL*PAVLTS
Trigger: GGAAGTGAGCACTGCCGGCCACAGATCCTGGGAAAG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACCGCCGGGCTGCCCTTaGCCTGGAAGAGCGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSPPGCP*PGRASA
Trigger: AGCACTCGCTCTTCCAGGCCAAGGGCAGCCCGGCGG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTCTGGGTCCAGCATCTaGCTGAAGAGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWSGSSI*LKSSCS
Trigger: GGAGCAGCTGCTCTTCAGCCAGATGCTGGACCCAGA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTAGGAATCCTGGTCTaGGAAGAGGCACGAGGCACC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVGILV*EEARGT
Trigger: GGTGCCTCGTGCCTCTTCCCAGACCAGGATTCCTAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTGAAAGTACCACAGCCTaGTTAGAGGAGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPESTTA*LEEVAS
Trigger: TGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTC...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCATGGGTCCCCCAAGAGTaGGAAAAAGTGCTTAACATG +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAWVPQE*EKVLNM
Trigger: CATGTTAAGCACTTTTTCCCACTCTTGGGGGACCCA...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACACTGCTCCGCATGTCTaGAGCCTACTTCATAGGACC +
Preference number: 4 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNTAPHV*SLLHRT
Trigger: GGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGT...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGAGACCCTAGCAAGAAGTaGGCATACTCTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRDPSKK*AYSAQL
Trigger: GAGCTGCGCAGAGTATGCCCACTTCTTGCTAGGGTC...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCTACCAAAGGGCTCTCTaGATAAGAGGCAGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGYQRAL*IRGRLV
Trigger: AACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTA...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCCAGGTTTGCAAGGCTaGAAGGAAACTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRPGLQG*KETAEA
Trigger: TGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp AATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTaGCTTTGGTGGGTGTGGCACAAGGGAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NFLGCAGRDPGH*LWWVWHKGEKR
Trigger: TCTTTTCTCTCCCTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp CTTTGCAGCTGCTCCTTGTTCCCGGATTCTCCAGGTTaGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: LCSCSLFPDSPG*QGWKETAEAFH
Trigger: GTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACAGGGTGGCCCAGGCTaGTGGGCTTTTTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGQGGPG*WAFSVL
Trigger: GAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCTG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCAGGGTGGCCCAGGCTaGTGGGCTTTTTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPQGGPG*WAFSVL
Trigger: GAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCTG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGCACTCTGGGCTGTGTaGGTGATGGGGGAAGTTACA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVALWAV*VMGEVT
Trigger: TGTAACTTCCCCCATCACTCACACAGCCCAGAGTGC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTTGCTGAGAGTGGCTaGACCACCAGTTTGCATGAC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLAESG*TTSLHD
Trigger: GTCATGCAAACTGGTGGTTCAGCCACTCTCAGCAAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCACTTCTGGATCTTGCTaGGAGTGGCTGAACCACCAG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSTSGSC*EWLNHQ
Trigger: CTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCTTGACAGGGATGCCTaGGGACTTCTGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTLDRDA*GLLDLA
Trigger: AGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGCCCATTTACTGGCTTaGCAGGGATGCCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIAHLLA*QGCLRT
Trigger: AGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCCCGATCTGTCTGATTaGCAGGGGCTGGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCPDLSD*QGLEWS
Trigger: GGACCACTCCAGCCCCTGTCAATCAGACAGATCGGG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCAAGGAGATGTTGTCTaGGTCCAAGGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTQGDVV*VQGHCL
Trigger: AAGGCAGTGGCCTTGGACTCAGACAACATCTCCTTG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTAGTGAGGGTGGTTTaGCAAAGCTCTTCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLVRVV*QSSSLW
Trigger: CCACAGCGAAGAGCTTTGTCAAACCACCCTCACTAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAGGGCCCCCAGATGCTaGGCTTGTAGCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPRAPRC*ACSMQI
Trigger: GATCTGCATGCTACAAGCTCAGCATCTGGGGGCCCT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGTGTTCCGATCCCGCTaGTTACTGTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYVFRSR*LLSSCP
Trigger: TGGGCAACTGGACAGTAATCAGCGGGATCGGAACAC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTCTCGGAAGGATCCTaGCCGAATCATTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVSEGS*PNHSLG
Trigger: CCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCACGAGGTGGAGGACTTaGTGGAGGGTGAAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGITRWRT*WRVKQS
Trigger: AGACTGCTTCACCCTCCATCAAGTCCTCCACCTCGT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGCCGAAGGAATGGGTaGGTGCCAGGCCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGRRNG*VPGLGS
Trigger: GCTCCCTAGGCCTGGCACTCACCCATTCCTTCGGCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTTGGACCACAAGTACTaGTGCCATCCATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLLDHKY*CHPWVT
Trigger: TGTCACCCATGGATGGCATCAGTACTTGTGGTCCAA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGCCGATGAGGAAGTCTaGGGTGCTGTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIADEEV*GAVLLK
Trigger: CTTGAGAAGCACAGCACCTCAGACTTCCTCATCGGC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTGTTCCACAGGTCAATaGACCAGGTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSCSTGQ*TRSGSP
Trigger: AGGACTTCCGGACCTGGTTCATTGACCTGTGGAACA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTGGTCTTGTTGGGCTaGTGGCCAGGGAAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYLVLLG*WPGKCV
Trigger: GACACACTTCCCTGGCCATCAGCCCAACAAGACCAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACACAGAGGCTGGCAATTaGGCTACCCAGCAGAACGTG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYTEAGN*ATQQNV
Trigger: CACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGGTTGGGTGGAAGAGTaGTCCAGGTTGGTATGCCTA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSGWVEE*SRLVCL
Trigger: TAGGCATACCAACCTGGATCACTCTTCCACCCAACC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGGGGTTATAGCACCATaGGGAGGCTCAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPGVIAP*GGSAFC
Trigger: GCAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTCAGAGAAGTCTGGATaGGTGTCCCAAGGGGTTATA +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSEKSG*VSQGVI
Trigger: TATAACCCCTTGGGACACTCATCCAGACTTCTCTGA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTCCCAAGTGAGGATGTaGGGTGTCTGTGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSQVRM*GVCEKQ
Trigger: CTGCTTCTCACAGACACCTCACATCCTCACTTGGGA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTTGATTTGGAGGACTaGGTCCCCTTCAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLDLED*VPFSQA
Trigger: TGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACGGGCTGCACGCTCTTaGCGCTGCTGCCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDARAARS*RCCPAF
Trigger: GAATGCTGGGCAGCAGCGTCAAGAGCGTGCAGCCCG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGATCTCCAGGGAGCTGTaGGTCACCTGGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWISREL*VTWDPR
Trigger: GCGAGGGTCCCAGGTGACTCACAGCTCCCTGGAGAT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCATTTTCCTCCCTTGGCTaGACTTGTCTAACGATAGTC +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAFSSLG*TCLTIV
Trigger: GACTATCGTTAGACAAGTTCAGCCAAGGGAGGAAAA...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGAAGCATCTCCCAGACATaGATTTCCTGGGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRSISQT*ISWGVQ
Trigger: CTGCACACCCCAGGAAATTCATGTCTGGGAGATGCT...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGGGAGTCACGGAATCCTaGAGAGAGCTGTGGAACCTT +
Preference number: 4 (lower is better)
Translates to: RGESTTAWLEEVASFLPMGVTES*RELWNL
Trigger: AAGGTTCCACAGCTCTCTTCAGGATTCCGTGACTCC...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCATCAAGGCCTGGGCTCTaGGGAGATTATAATATGTCA +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEASRPGL*GDYNMS
Trigger: TGACATATTATAATCTCCTCAGAGCCCAGGCCTTGA...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCGCCACCAGATTAGCCTaGAACAAACACAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGATRLA*NKHRKR
Trigger: TCTCTTTCTGTGTTTGTTTCAGGCTAATCTGGTGGC...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAACCTAACCCTCGCCTaGCCTCCGCTCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPNLTLA*PPLPFL
Trigger: GAGAAAAGGGAGCGGAGGGCAGGCGAGGGTTAGGTT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367295.5
CDS-3UTR GCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGCTGAACCACCAGTTTaGATGACAGTGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTAEPPV*MTVAVP
Trigger: AGGCACAGCCACTGTCATGCAAACTGGTGGTTCAGC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGGTTGGTGGCAGCTCTaGCAGCTTGGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHGWWQL*QLGGCG
Trigger: CCCACAGCCACCAAGCTGGCAGAGCTGCCACCAACC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAATATTGAGGATGGGTaGCGGACTGGGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSNIEDG*RTGGEA
Trigger: TGCTTCACCCCCAGTCCGGCACCCATCCTCAATATT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLLGRL*QVSQAG
Trigger: TCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAACTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQLLGRL*QVSQAG
Trigger: TCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAG...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGGCTCCCTGAATGACTaGCTGGGCCTCAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYGSLND*LGLRVL
Trigger: AAGAACTCTGAGGCCCAGGCAGTCATTCAGGGAGCC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCATCAGCATCCTTGCTaGTGCCGATGCTGGAATGGC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYHQHPC*CRCWNG
Trigger: GCCATTCCAGCATCGGCAGCAGCAAGGATGCTGATG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGTCGCATCAGCATCCTTaGTGCTGCCGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LPKETAQKRQLGMKESDQSHQHP*CCRCWN
Trigger: ATTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGA...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCAGTCGGTCATTCTCTaGTTTCAGCAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSQSVIL*FQQVHL
Trigger: GAGGTGGACCTGCTGAAAGCAGAGAATGACCGACTG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGATGATCCAGGGACCTaGCCTGGAGTGGAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGDDPGT*PGVEPD
Trigger: ATCAGGCTCCACTCCAGGGCAGGTCCCTGGATCATC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCCCAGGAAGAATTCCTaGTGCTTCAAGTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLPRKNS*CFKSPL
Trigger: CAAAGGGGACTTGAAGCAGCAGGAATTCTTCCTGGG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTTGGAAAGATACAGTTaGAGATCCTTGCAAGACTGC +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALERYS*RSLQDC
Trigger: GCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGGGGGTGACAGTGATTaGCGAACCCTTAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLGGDSD*RTLKVL
Trigger: CAACACTTTAAGGGTTCGGCAATCACTGTCACCCCC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGGGCTGGAGAGCCAGTaGTCTGAAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCGLESQ*SERGEG
Trigger: CCCCTCTCCTCTTTCAGAGCACTGGCTCTCCAGCCC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGGAGGCTCAGCCTTCTaGAGTTGCCATATAACTGTG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLGGSAF*SCHITV
Trigger: CACAGTTATATGGCAACTGCAGAAGGCTGAGCCTCC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAGCTCCACCTCGGGCTaGACGCTCTTGACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSSTSG*TLLTLL
Trigger: CAGCAGCGTCAAGAGCGTGCAGCCCGAGGTGGAGCT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATTTGCGCCTTGGCCTTaGTGGAGAGCAGCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGFAPWP*WRAARR
Trigger: ACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGTCTCTTCCAGGTTCTaGCGGAGATCCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPVSSRF*RRSRTF
Trigger: GAATGTCCTGGATCTCCGGCAGAACCTGGAAGAGAC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATGGGCCCGTTCGCCGTaGATGTACCAGGCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKWARSP*MYQAGV
Trigger: GACGCCCGCCTGGTACATGCACGGCGAACGGGCCCA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTCCGAGAAGGGCTTCTaGCCCGGGTCTGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSEKGF*PGSGRL
Trigger: CAGTCTGCCAGACCCGGGGCAGAAGCCCTTCTCGGA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTGCCCTGCACTGGGCTaGAGACTGGAGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWCPALG*RLERKP
Trigger: GGGCTTCCTCTCCAGTCTGCAGCCCAGTGCAGGGCA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGGGAGAGGGGCGCTTaGCCTGCACTGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRERGA*PALGCR
Trigger: TCTGCAGCCCAGTGCAGGGCAAGCGCCCCTCTCCCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGACATAATAATGTTCTCTaGCTCCCTGGCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRHNNVL*LPGASP
Trigger: GGGAGAGGCGCCAGGGAGGCAGAGAACATTATTATG...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTAGCTGGCCAACTGGCTaGAAGATGTATAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRSWPTG*KMYRQG
Trigger: ACCTTGCCTATACATCTTGCAGCCAGTTGGCCAGCT...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTCCTGCGAGAAGCAGTaGGAGTACTTGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSCEKQ*EYLGGS
Trigger: ACTCCCTCCCAAGTACTCCCACTGCTTCTCGCAGGA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCTCAGAGGAGGAGCGTTaGAGCCCAGTATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSSEEER*SPVFFT
Trigger: AGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGA...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAGGAGCCAGGAATCCTaGCTCTGCACTGTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTRSQES*LCTVGN
Trigger: GTTTCCAACAGTGCAGAGCCAGGATTCCTGGCTCCT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCTGATTGACAGGGGCTaGAGTGGTCCGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWLIDRG*SGPPTG
Trigger: GCCAGTGGGCGGACCACTCCAGCCCCTGTCAATCAG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTGCTGGGGAAGGCACTaGGGAGGCTCATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPCWGRH*GGSLAS
Trigger: AGATGCCAATGAGCCTCCCCAGTGCCTTCCCCAGCA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGACGGGAGTACTGCTaGGGAAGGCACTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGREYC*GRHWGG
Trigger: GCCTCCCCAGTGCCTTCCCCAGCAGTACTCCCGTCC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAGCCCACCAATGGTATaGGAATGTCGCCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSSPPMV*ECRLSL
Trigger: CAAGGAGAGGCGACATTCCCATACCATTGGTGGGCT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGAGDS*RGGRSG
Trigger: CCCACTGCGGCCACCACGCCAAGAATCACCCGCTCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAAGGCCGCCTCGTGGGTaGGGATGCTGTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKRPPRG*GCCWSG
Trigger: CCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACGTGAACATCGTCCGTaGGGTCTCGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGREHRP*GLGRIL
Trigger: CAGGATCCTTCCGAGACCCCACGGACGATGTTCACG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTGCCGATGCTGGAATaGCTAGTGATGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLPMLE*LVMLLR
Trigger: CCTCAACAGCATCACTAGCCATTCCAGCATCGGCAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCTGCCGATGCTGGAATaGCTAGTGATGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTLPMLE*LVMLLR
Trigger: CCTCAACAGCATCACTAGCCATTCCAGCATCGGCAG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAACCATGCTGTAGTTTaGGGGATGAGGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSNHAVV*GMRGLK
Trigger: CTTCAGCCCCCTCATCCCCCAAACTACAGCATGGTT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGGACCTGCCCTGGAGTaGAGCCTGATGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSGPALE*SLMRGL
Trigger: CAGGCCCCTCATCAGGCTCCACTCCAGGGCAGGTCC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGCTGCATCATCGGCTTaGGGATCAGCGTCTCGAACA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYAASSA*GSASRT
Trigger: TGTTCGAGACGCTGATCCCCAAGCCGATGATGCAGC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGCTGCATCATCGGCTTaGGGATCAGCGTCTCGAACA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVAASSA*GSASRT
Trigger: TGTTCGAGACGCTGATCCCCAAGCCGATGATGCAGC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCCTTTATCCCATCCTTaGCTCCTTCCTGTAGATAGG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELPLSHP*LLPVDR
Trigger: CCTATCTACAGGAAGGAGCCAAGGATGGGATAAAGG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGTTGGGGTCCAGGATaGTTTCTCGATCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGWGPG*FLDLET
Trigger: AGTCTCCAGATCGAGAAACCATCCTGGACCCCAACC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTCTCCTCCTGGGGCTaGAGAGCCAGTGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYFSSWG*RASALK
Trigger: TTTCAGAGCACTGGCTCTCCAGCCCCAGGAGGAGAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGCAGCTCTCTACCTTaGCAACTGGTTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGSSLP*QLVPLS
Trigger: AGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAGCCAAACTAGCCCCTaGAAAAGCAACCCAAGCATC +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSSQTSP*KSNPSI
Trigger: GATGCTTGGGTTGCTTTTCCAGGGGCTAGTTTGGCT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGAGTGAAAGGCCAAACTaGCCACAAGACAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSERPN*PQDRGM
Trigger: CATTCCTCTGTCTTGTGGCCAGTTTGGCCTTTCACT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGAACCCTGTCATCCATaGGAGCTTACCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPEPCHP*ELTTWM
Trigger: CATCCACGTGGTAAGCTCCCATGGATGACAGGGTTC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCATGGCAGAAGGCACTaGCTGGGCAGCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVHGRRH*LGSTRK
Trigger: TTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGCCATG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGGGTCGGAGGCAGTTaGAATGAAAGAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGVGGS*NERRGS
Trigger: AGAACCCCTTCTTTCATTCCAACTGCCTCCGACCCC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTATTCCAGTATTAGGCTaGATTCTTCTGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAIPVLG*ILLKVP
Trigger: AGGCACCTTCAGAAGAATCCAGCCTAATACTGGAAT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCTCAGGAACCTCTCCTaGAGTTGTGGCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILRNLS*SCGSPH
Trigger: ATGGGGAGAGCCACAACTCCAGGAGAGGTTCCTGAG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCACCCATGCACCCTGGTaGCCCCATATATCCGTAGTC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGITHAPW*PHISVV
Trigger: GACTACGGATATATGGGGCCACCAGGGTGCATGGGT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTGCACCCATGCACCCTaGTGGCCCCATATATCCGTA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGICTHAP*WPHISV
Trigger: TACGGATATATGGGGCCACCAGGGTGCATGGGTGCA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACTTTCCCAGGATCTGTaGCCGGCAGTGCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGLSQDL*PAVLTS
Trigger: GGAAGTGAGCACTGCCGGCCACAGATCCTGGGAAAG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTACAGAAGGAGGTTCTaGCCTGGTTCTCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYYRRRF*PGSQAQ
Trigger: CTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGATAAGGGGCCTTCCTaGGATACTGGAGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIDKGPS*DTGALH
Trigger: GTGTAGGGCTCCAGTATCCCAGGAAGGCCCCTTATC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGCCTTTGGGCGCCTTaGCCATATCGTCGCTCCATT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSLWAP*PYRRSI
Trigger: AATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGGGCTGCCCTTGGCCTaGAAGAGCGAGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSGLPLA*KSECSD
Trigger: GTCGGAGCACTCGCTCTTCCAGGCCAAGGGCAGCCC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAAGGCGCGCTCCTCCTaGCCCTTGGCAGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYKARSS*PLAEGT
Trigger: TGTCCCCTCTGCCAAGGGCCAGGAGGAGCGCGCCTT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTTTCTCTGGGACTCTaGGTCCAGCATCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLSLGL*VQHLAE
Trigger: TTCAGCCAGATGCTGGACCCAGAGTCCCAGAGAAAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCCTGCAGCCGCGGACTaGACTGGCCATAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWPAAAD*TGHSAM
Trigger: CATGGCGCTATGGCCAGTCCAGTCCGCGGCTGCAGG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGCTGCGCATGGGCATaGTGTGGGAGTAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGCAWA*CGSSGP
Trigger: GGGCCCACTACTCCCACACCATGCCCATGCGCAGCC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTGCTGGGGCTGCGCATaGGCATGGTGTGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCCWGCA*AWCGSS
Trigger: ACTACTCCCACACCATGCCCATGCGCAGCCCCAGCA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTACCTTCCGGAGCCCCTaGTATTTGAGTTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPTFRSP*YLSFSV
Trigger: CACGGAGAAACTCAAATACCAGGGGCTCCGGAAGGT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGTTTGCAACCTGTACTaGAAGGGGGCCACCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPVCNLY*KGATVA
Trigger: AGCCACGGTGGCCCCCTTCCAGTACAGGTTGCAAAC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGCCCTTTGCCCATTGCTaGGATTACAGCCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPKETAQKRQLGMKESDQPFAHC*DYSLSG
Trigger: CCCTGAAAGGCTGTAATCCCAGCAATGGGCAAAGGG...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACAGTTTGACCTCTAGCTaGCCAACTGGCTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNSLTSS*PTGCKM
Trigger: CATCTTGCAGCCAGTTGGCCAGCTAGAGGTCAAACT...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCGCTCTATGTGATATTTaGTGTGGCCAACTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGALCDI*CGQLGR
Trigger: CCTACCAAGTTGGCCACACCAAATATCACATAGAGC...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp GATGGGGCTATACCTTCTCATGACAGAGGCTGGCAATaGAGCTACCCAGCAGAACGTGTGCTCTCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: DGAIPSHDRGWQ*SYPAERVLSKG
Trigger: CCCTTTTGAGAGCACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 72 bp CAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTaGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QGWKETAEAFHR*ATRCQVCFMRS
Trigger: ACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp TCTTCCTCCTCTGCTACTCCACTGCTTCACCCTTTCTaGCTTTGCAGCTGCTCCTTGTTCCCGGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSSATPLLHPF*LCSCSLFPDSP
Trigger: TGGAGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCAGTGGAGTAGCAGAGGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAGGGGCTTTCTCCTCTaGTTCACTAAACCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSRGFLL*FTKPAQ
Trigger: CTGAGCTGGTTTAGTGAATCAGAGGAGAAAGCCCCT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTTGCTGAGAGTGGCTaGACCACCAGTTTGCATGAC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLAESG*TTSLHD
Trigger: GTCATGCAAACTGGTGGTTCAGCCACTCTCAGCAAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCCCGATCTGTCTGATTaGCAGGGGCTGGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWPDLSD*QGLEWS
Trigger: GGACCACTCCAGCCCCTGTCAATCAGACAGATCGGG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTCTTCGCTGTGGCCCTaGGAGGGGTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSSLWP*EGLVAA
Trigger: AGCTGCCACCAACCCCTCTCAGGGCCACAGCGAAGA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCAGATCTGGGACCTTTaGAGCATGGGTGGTATCACT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSQIWDL*SMGGIT
Trigger: AGTGATACCACCCATGCTTCAAAGGTCCCAGATCTG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTGGGAGAAGCTGGCTaGGTTAATATTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLGEAG*VNIEDG
Trigger: CCCATCCTCAATATTAACTCAGCCAGCTTCTCCCAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWCCWSG*FLAWWP
Trigger: CGGCCACCACGCCAAGAATCACCCGCTCCAACAGCA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGCCAGGGACAGCACTaGGCCGTGAACATCGTCCGT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGQGQH*AVNIVR
Trigger: ACGGACGATGTTCACGGCTCAGTGCTGTCCCTGGCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCACTTTTTCCTGGGATaGTTCCAGTTCCCTACGAAG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLHFFLG*FQFPTK
Trigger: CTTCGTAGGGAACTGGAATCATCCCAGGAAAAAGTG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGCACTTTTTCCTGGGATaGTTCCAGTTCCCTACGAAG +
Preference number: 4 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWHFFLG*FQFPTK
Trigger: CTTCGTAGGGAACTGGAATCATCCCAGGAAAAAGTG...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTTTGGGTGTGGTTTCTaGGGCATTAAGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWFGCGF*GIKGSL
Trigger: CAGGGAGCCCTTAATGCCTCAGAAACCACACCCAAA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGATGCCATCCATGGGTaGCAGGTCTGTGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGDAIHG*QVCVCK
Trigger: CTTGCAGACACAGACCTGTCACCCATGGATGGCATC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTTGGACCACAAGTACTaGTGCCATCCATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLDHKY*CHPWVT
Trigger: TGTCACCCATGGATGGCATCAGTACTTGTGGTCCAA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGACTGATATGTTATTaGCACCTCGACGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLRLICY*HLDGKE
Trigger: CTCCTTGCCGTCGAGGTGTCAATAACATATCAGTCT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGAAGGTCAACATCCTaGAGCTCAAGTGCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLRRSTS*SSSASH
Trigger: ATGGCTTGCACTTGAGCTTCAGGATGTTGACCTTCT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCATTGATGTCGCTGTCTaGCTCTACCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSIDVAV*LYQLPP
Trigger: AGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAAT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTTGGGGTGCTGTCTTTaGCTGTCCTATCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPLGCCL*LSYPRE
Trigger: CTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGTCTGTGAGAAAATCTaGGGAGCTTCCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGVCEKI*GASCLP
Trigger: GGGGAGGCAGGAAGCTCCTCAGATTTTCTCACAGAC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGAGACCTTAAGGCAGTaGTTTCAGCACCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTETLRQ*FQHHPW
Trigger: CCAAGGATGGTGCTGAAATCACTGCCTTAAGGTCTC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGATGGCATTAAAAGTCTaGGCCTTGCCATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLMALKV*ALPWNW
Trigger: CCAGTTCCATGGCAAGGCTCAGACTTTTAATGCCAT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTCCCAAGTGAGGATGTaGGGTGTCTGTGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSQVRM*GVCEKQ
Trigger: CTGCTTCTCACAGACACCTCACATCCTCACTTGGGA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCACTGCTTTAAGGAATaGGAAACCAGGGGATCACTC +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLHCFKE*ETRGSL
Trigger: GAGTGATCCCCTGGTTTCTCATTCCTTAAAGCAGTG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGTGGTTTGGCATAGTTTaGCCTCTAGCTGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LPKETAQKRQLGMKESDQWFGIV*PLAGQL
Trigger: CAGTTGGCCAGCTAGAGGTCAAACTATGCCAAACCA...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCTGTTTCATGAGGAGTaGAGGATACCAAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRLFHEE*RIPKGS
Trigger: AGAGCCCTTTGGTATCCTTCACTCCTCATGAAACAG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCCCTCTGCTCTATGTaGTATTTGGTGTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNSLCSM*YLVWPT
Trigger: AGTTGGCCACACCAAATATCACATAGAGCAGAGGGA...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTATTGTTGAGTTCCTaGGAGAAGCAGTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLLLSS*EKQWEY
Trigger: GTACTCCCACTGCTTCTCGCAGGAACTCAACAATAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTGGGGTCAATGCTGCTaGTCACAGGGCGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGWGQCC*SQGEVH
Trigger: GTGGACCTCGCCCTGTGAGCAGCAGCATTGACCCCA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGACTGGGGTCAATGCTaGTGCTCACAGGGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHDWGQC*CSQGEV
Trigger: GACCTCGCCCTGTGAGCAGCAGCATTGACCCCAGTC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGCGTAAGGCCTCCCTaGTTGGTGCTGAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGVRPP*LVLRRL
Trigger: CAGTCTCCTCAGCACCAAGCAGGGAGGCCTTACGCC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGCTGTGGGGTGGCTTaGTTGGTTCTTGGGAGTACT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGCGVA*LVLGST
Trigger: AGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGCTGAGCTTGTAGCATaGAGATCTGGGACCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLAELVA*RSGTFE
Trigger: TTCAAAGGTCCCAGATCTGCATGCTACAAGCTCAGC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTATATTCACCAGGCTCTaGTCAAAAGCAGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRIFTRL*SKAATR
Trigger: TCTGGTGGCTGCTTTTGAGCAGAGCCTGGTGAATAT...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGGCTCCCTGAATGACTaGCTGGGCCTCAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPGSLND*LGLRVL
Trigger: AAGAACTCTGAGGCCCAGGCAGTCATTCAGGGAGCC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCAGGACGAGGCGCCGGTaGTTCAGCAGGAGGCTTATG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGRTRRR*FSRRLM
Trigger: CATAAGCCTCCTGCTGAAGCACCGGCGCCTCGTCCT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTCCGGAAGTCCTCAATaGCAATGGGACACGACAGAA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSSGSPQ*QWDTTE
Trigger: TTCTGTCGTGTCCCATTGGCATTGAGGACTTCCGGA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGAGACCTGGCCTAAATaGAGCAGTCAGCTGAGAGTA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSETWPK*SSQLRV
Trigger: TACTCTCAGCTGACTGCTGCATTTAGGCCAGGTCTC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCAGACATGCACCCATaGACCCTGGTGGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCADMHP*TLVAPY
Trigger: ATATGGGGCCACCAGGGTGCATGGGTGCATGTCTGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATATCTGTGGCCGGCAGTaGTCACTTCCAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHICGRQ*SLPGLG
Trigger: GCCTAGCCCTGGAAGTGAGCACTGCCGGCCACAGAT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGAAGAGACCTCCAACTaGTTTTCCTTGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLEETSN*FSLLKP
Trigger: GGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCCTTGGACCCCACCTTaGCTAAGCCTTTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWPWTPP*LSLWAP
Trigger: AGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGCTCGTCGTCCGATTTaGCATCTTCGCTCACGGCCG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHARRPI*HLRSRP
Trigger: CGGCCGTGAGCGAAGATGGCAAATCGGACGACGAGC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCCCAGGGGAACCCTTTTaGTCTGGCTGGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCPGEPF*SGWAFS
Trigger: GGAGAAAGCCCAGCCAGAGCAAAAGGGTTCCCCTGG...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATCCTGCGAGAAGCAGTaGGAGTACTTGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSCEKQ*EYLGGS
Trigger: ACTCCCTCCCAAGTACTCCCACTGCTTCTCGCAGGA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGTTACAGCCACAGGTaGGGTCTTGCCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSYSHR*GLALLQ
Trigger: CTGAAGAAGGGCAAGACCCCACCTGTGGCTGTAACT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCATGCCTGAGGACTTCTaGATCTTGCTGAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSMPEDF*ILLRVA
Trigger: AGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCAT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTATGCCTGAGGACTTCTaGATCTTGCTGAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPMPEDF*ILLRVA
Trigger: AGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCAT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAGGAGCCAGGAATCCTaGCTCTGCACTGTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVRSQES*LCTVGN
Trigger: GTTTCCAACAGTGCAGAGCCAGGATTCCTGGCTCCT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGGCTTGCTTGGTTCTTaGGAGTACTTTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIGLLGS*EYFLGS
Trigger: GCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGCAGCTCTGCCAGCTTaGTGGCTGTGGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAAALPA*WLWGGL
Trigger: CAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCATGCGGGTCTCTTTTaGCACACTGAAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSHAGLF*HTETTH
Trigger: ATGAGTGGTTTCAGTGTGCCAAAAGAGACCCGCATG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCCAGTTGCCCAGCTCTaGGGCTTCCACTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCPVAQL*GFHSKS
Trigger: TGACTTGGAGTGGAAGCCCCAGAGCTGGGCAACTGG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAGGTGGAGGAGGCACTaGAGGCCAGGGACAGCACTG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIRWRRH*RPGTAL
Trigger: CAGTGCTGTCCCTGGCCTCCAGTGCCTCCTCCACCT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCTGCCGATGCTGGAATaGCTAGTGATGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EGYQRALWIRGRLVRKGALPMLE*LVMLLR
Trigger: CCTCAACAGCATCACTAGCCATTCCAGCATCGGCAG...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTGGGGCCGAAGGAATaGGTGAGTGCCAGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLGPKE*VSARPR
Trigger: CCTAGGCCTGGCACTCACCCATTCCTTCGGCCCCAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGTCACTTCCTCCTTTaGACCACAAGTACTGATGCC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGHFLL*TTSTDA
Trigger: GGCATCAGTACTTGTGGTCCAAAGGAGGAAGTGACC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGTTGGGGTCCAGGATaGTTTCTCGATCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGWGPG*FLDLET
Trigger: AGTCTCCAGATCGAGAAACCATCCTGGACCCCAACC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCTCCAGCCAGATCTCTaGGGGAGGAGTTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCLQPDL*GRSCWQ
Trigger: CTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCAAAGAAAACCCACTTaGAAAAGCCAAACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELQRKPT*KSQTSP
Trigger: GGGGCTAGTTTGGCTTTTCCAAGTGGGTTTTCTTTG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGGGGGCGTAGCTGAATaGAGGTTAACATTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSGGVAE*RLTFPA
Trigger: AGCAGGAAATGTTAACCTCCATTCAGCTACGCCCCC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCTCAGCCTAGAAGCTaGTCCCGCGGGGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAQPRS*SRGAFR
Trigger: TCTGAAAGCCCCGCGGGACCAGCTTCTAGGCTGAGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAAGCAATTGGAGACCTaGCCTAAATGCAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSKQLET*PKCSSQ
Trigger: CTGACTGCTGCATTTAGGCCAGGTCTCCAATTGCTT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTGTGGCTCTCCCCATTaGTTGACATTAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: AAVLLMSPMSSRGQERAACGSPH*LTLDIE
Trigger: TTCAATATCTAATGTCAACCAATGGGGAGAGCCACA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTGCGCTTGGTGATCTaGGTCACTTCAGCACTTATT +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLRLVI*VTSALI
Trigger: AATAAGTGCTGAAGTGACCCAGATCACCAAGCGCAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAACCCATGCACCCTGGTaGCCCCATATATCCGTAGTC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGTHAPW*PHISVV
Trigger: GACTACGGATATATGGGGCCACCAGGGTGCATGGGT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAGCTCCAGCACAGCCTaGCCAACAAGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPSSSTA*PTRQNS
Trigger: GGAGTTTTGCCTTGTTGGCCAGGCTGTGCTGGAGCT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGAAGGCCTCTTCAGCTaGCTCTGGCATGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELEGLFS*LWHEFY
Trigger: ATAAAATTCATGCCAGAGCCAGCTGAAGAGGCCTTC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACCTTGCCTAAGCCTTTaGGCGCCTTGGCCATATCGT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGPCLSL*APWPYR
Trigger: ACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGCGGTTGGAGAGGCTaGACACGCTGCGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASGWRG*TRCVGW
Trigger: CCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTGCTGGGGCTGCGCATaGGCATGGTGTGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHCWGCA*AWCGSS
Trigger: ACTACTCCCACACCATGCCCATGCGCAGCCCCAGCA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCCTGGGACTATTCCATaGGGAGCTGAAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCPGTIP*GAEGAF
Trigger: GAAGGCCCCTTCAGCTCCCCATGGAATAGTCCCAGG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACTTCTGCCCCGGGTCTaGCAGACTGGAGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALLPRV*QTGVPS
Trigger: GGAAGGGACTCCAGTCTGCCAGACCCGGGGCAGAAG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCCATTCAGAATCTTGGTaGAGATTCTTCTACCTAATT +
Preference number: 4 (lower is better)
Translates to: VGMLLERVILGVVAAVGLHSESW*RFFYLI
Trigger: AATTAGGTAGAAGAATCTCCACCAAGATTCTGAATG...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCATGTTACAATTCTTATaGGTCCCCCAAGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGMLQFL*VPQEWE
Trigger: TTCCCACTCTTGGGGGACCCATAAGAATTGTAACAT...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGATTGAGAGGGGTAAAGTaGTCTGGGCCCCTACATCTA +
Preference number: 4 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRLRGVK*SGPLHL
Trigger: TAGATGTAGGGGCCCAGACCACTTTACCCCTCTCAA...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGTCTCATGGCTCCTACTaGCTTACAATTCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQSHGSY*LTILPP
Trigger: GGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGA...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGGCGGGCCATAGCCTCTaGGGTCGTTCCTATTATTTT +
Preference number: 4 (lower is better)
Translates to: LPKETAQKRQLGMKESDQAGHSL*GRSYYF
Trigger: AAAATAATAGGAACGACCCCAGAGGCTATGGCCCGC...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCAGAAGGGCAAGGAATTaGGATAAGGAATATGCTCAC +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGRRARN*DKEYAH
Trigger: GTGAGCATATTCCTTATCCCAATTCCTTGCCCTTCT...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCCAATGGGCGAGGCATTaGAATTCTGCAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGQWARH*NSAKLD
Trigger: ATCAAGTTTTGCAGAATTCCAATGCCTCGCCCATTG...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATACACCCGAAAAGGTATaGGCTGTGGGCCACGCGGAG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYTPEKV*AVGHAE
Trigger: CTCCGCGTGGCCCACAGCTCATACCTTTTCGGGTGT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367295.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTTCTCCACCCTTGGATaGATCATCACAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIFSTLG*IITALR
Trigger: CCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCCCATTTACTGGCTTaGCAGGGATGCCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCAHLLA*QGCLRT
Trigger: AGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACACGCTCATAGAACTTaGCTTGGCTGGCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSHAHRT*LGWPGQ
Trigger: CTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCAGATCTGGGACCTTTaGAGCATGGGTGGTATCACT +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWQIWDL*SMGGIT
Trigger: AGTGATACCACCCATGCTTCAAAGGTCCCAGATCTG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGCTCCTGTGCAGGCCTaGGAGTTTGGGGTACATGCG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHAPVQA*EFGVHA
Trigger: CGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGTCTCCTCCTGGGACTaGAGCTGGTACCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHVSSWD*SWYLSP
Trigger: AGGGCTCAGGTACCAGCTTCAGTCCCAGGAGGAGAC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGGAGAAGGCAGCTCTaGCTGGTCATCGGATTCAGG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGRRQL*LVIGFR
Trigger: CCTGAATCCGATGACCAGTCAGAGCTGCCTTCTCCC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGGGAGAAGGCAGCTCTaGCTGGTCATCGGATTCAGG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHGRRQL*LVIGFR
Trigger: CCTGAATCCGATGACCAGTCAGAGCTGCCTTCTCCC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGGTCTCGGAAGGATCCTaGCCGAATCATTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKVSEGS*PNHSLG
Trigger: CCCAAGGGAATGATTCGGTCAGGATCCTTCCGAGAC...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCACTTTTTCCTGGGATaGTTCCAGTTCCCTACGAAG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSHFFLG*FQFPTK
Trigger: CTTCGTAGGGAACTGGAATCATCCCAGGAAAAAGTG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCACTTTTTCCTGGGATaGTTCCAGTTCCCTACGAAG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTHFFLG*FQFPTK
Trigger: CTTCGTAGGGAACTGGAATCATCCCAGGAAAAAGTG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTACGAGGTGGAGGACTTaGTGGAGGGTGAAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCTRWRT*WRVKQS
Trigger: AGACTGCTTCACCCTCCATCAAGTCCTCCACCTCGT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGTTGGTGGGCAGAGTTaGGGGCCTCCAAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSVGGQS*GPPSGC
Trigger: ACATCCGCTTGGAGGCCCTCAACTCTGCCCACCAAC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGTCAACTTTTCCACTaGCCTTGCTACAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSQLFH*PCYSPG
Trigger: TCCTGGGCTGTAGCAAGGTCAGTGGAAAAGTTGACT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCTCGTTTCACGTGGCTaGTGCTGTAGCCATGGATGG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCLVSRG*CCSHGW
Trigger: CCATCCATGGCTACAGCATCAGCCACGTGAAACGAG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTATCAGAATAGTGCAGTaGAAGGCCAAACTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPIRIVQ*KAKLAT
Trigger: TGTGGCCAGTTTGGCCTTTCACTGCACTATTCTGAT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTCAGAGAAGTCTGGATaGGTGTCCCAAGGGGTTATA +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSEKSG*VSQGVI
Trigger: TATAACCCCTTGGGACACTCATCCAGACTTCTCTGA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAAGGTGCCTGGCGGTTaGGAATTTAGCTATGGGACC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPKVPGG*EFSYGT
Trigger: GGTCCCATAGCTAAATTCTCAACCGCCAGGCACCTT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGACAGGGGTTGGCTTATaGAGTCGGCTTCTTAACTTT +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLTGVGL*SRLLNF
Trigger: AAAGTTAAGAAGCCGACTTCATAAGCCAACCCCTGT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGTTCCCAAAGGCTGCTaGTGCTGCTGGTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHVPKGC*CCWSCA
Trigger: GGCACAAGACCAGCAGCATCAGCAGCCTTTGGGAAC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCACACCAGCCTGGGTaGCAAAGCGAGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAHQPG*QSETPS
Trigger: AGAAGGAGTCTCGCTTTGTCACCCAGGCTGGTGTGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGGAACACCATGCATTTaGGAAACACGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSGTPCI*ETRTLS
Trigger: TGACAGAGTCCGTGTTTCTCAAATGCATGGTGTTCC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTATGGCATTGAACAGATaGATCTTGCTGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPMALNR*ILLGGD
Trigger: GTCTCCTCCCAGCAAGATTCATCTGTTCAATGCCAT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAGAGAGGTTGGTGAGTaGCTTCTGCTTGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGREVGE*LLLAQV
Trigger: AACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTCATGTAGCCGGACTTaGGGTCCACCTCATCCGAGT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSCSRT*GPPHPS
Trigger: ACTCGGATGAGGTGGACCTCAAGTCCGGCTACATGA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGACATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRTLAES*DVKVAT
Trigger: AGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGT...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTTCAGCCCATCAGACATaGACTCATCCATACCTATTA +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPSAHQT*THPYLL
Trigger: TAATAGGTATGGATGAGTTCATGTCTGATGGGCTGA...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCCCTGTATCTCGGAGCTaGCCAATGCCAGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLPVSRS*PMPANL
Trigger: GAGGTTTGCTGGCATTGGTCAGCTCCGAGATACAGG...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTATTGTTGAGTTCCTaGGAGAAGCAGTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLLLSS*EKQWEY
Trigger: GTACTCCCACTGCTTCTCGCAGGAACTCAACAATAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCCACAGGTGGGGTCTTaGCCTTCTTCAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHPQVGS*PSSGNQ
Trigger: CTGGTTCCCTGAAGAAGGGCAAGACCCCACCTGTGG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCCCTCAGGTTTGCCTaGGACTTTGAGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGALRFA*DFEGTL
Trigger: CAGAGTGCCCTCAAAGTCGCAGGCAAACCTGAGGGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATTGGGGTCAATGCTGCTaGTCACAGGGCGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYWGQCC*SQGEVH
Trigger: GTGGACCTCGCCCTGTGAGCAGCAGCATTGACCCCA...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGACTGGGGTCAATGCTaGTGCTCACAGGGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWDWGQC*CSQGEV
Trigger: GACCTCGCCCTGTGAGCAGCAGCATTGACCCCAGTC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGACTGGGGTCAATGCTaGTGCTCACAGGGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIDWGQC*CSQGEV
Trigger: GACCTCGCCCTGTGAGCAGCAGCATTGACCCCAGTC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGAGACTGGGGTCAATaGTGCTGCTCACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGDWGQ*CCSQGE
Trigger: CTCGCCCTGTGAGCAGCAGCATTGACCCCAGTCTCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGGTTGGTGGCAGCTCTaGCAGCTTGGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWGWWQL*QLGGCG
Trigger: CCCACAGCCACCAAGCTGGCAGAGCTGCCACCAACC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAATATTGAGGATGGGTaGCGGACTGGGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGNIEDG*RTGGEA
Trigger: TGCTTCACCCCCAGTCCGGCACCCATCCTCAATATT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGACTCCATGCTCCTGTaGAGGCCTGAGAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWDSMLL*RPESLG
Trigger: CCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGACTCCATGCTCCTGTaGAGGCCTGAGAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHDSMLL*RPESLG
Trigger: CCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCGGATTTGCTCAGATTaGATCCTCTCCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWRICSD*ILSSAE
Trigger: CTCAGCTGAGGAGAGGATGCAATCTGAGCAAATCCG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCGGATTTGCTCAGATTaGATCCTCTCCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIRICSD*ILSSAE
Trigger: CTCAGCTGAGGAGAGGATGCAATCTGAGCAAATCCG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTATATTCACCAGGCTCTaGTCAAAAGCAGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPIFTRL*SKAATR
Trigger: TCTGGTGGCTGCTTTTGAGCAGAGCCTGGTGAATAT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCATATTCACCAGGCTCTaGTCAAAAGCAGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSIFTRL*SKAATR
Trigger: TCTGGTGGCTGCTTTTGAGCAGAGCCTGGTGAATAT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCTCCTCCTCCTCATTTaGATGGAACAGCCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYLLLLI*MEQPSV
Trigger: CACACTAGGCTGTTCCATGCAAATGAGGAGGAGGAG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCCCAGGAAGAATTCCTaGTGCTTCAAGTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYPRKNS*CFKSPL
Trigger: CAAAGGGGACTTGAAGCAGCAGGAATTCTTCCTGGG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTGCAAGACTGCTGGTaGATGTTGAAGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYLQDCW*MLKVLT
Trigger: CGTCAGCACCTTCAACATGCACCAGCAGTCTTGCAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACATCCTGAAGCTCAAGTaGAAGCCATGGTTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYILKLK*KPWLGV
Trigger: GACACCCAACCATGGCTTGCACTTGAGCTTCAGGAT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTCCGGAAGTCCTCAATaGCAATGGGACACGACAGAA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSGSPQ*QWDTTE
Trigger: TTCTGTCGTGTCCCATTGGCATTGAGGACTTCCGGA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGAACCCTTAAAGTGTTaGCTGAAGGTTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVEPLKC*LKVGVQ
Trigger: CTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGGCTGGAGAGCCAGTaGTCTGAAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGLESQ*SERGEG
Trigger: CCCCTCTCCTCTTTCAGAGCACTGGCTCTCCAGCCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCACATATCCTTGACCTaGAGAGTCCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTHISLT*RVLKLQ
Trigger: CTGAAGCTTCAGGACTCTGCAGGTCAAGGATATGTG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGCTTACCACGTGGATaGAGAAGCTTTTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSLPRG*RSFCEG
Trigger: CCCCTCACAAAAGCTTCTGCATCCACGTGGTAAGCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGAGACCTGGCCTAAATaGAGCAGTCAGCTGAGAGTA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVETWPK*SSQLRV
Trigger: TACTCTCAGCTGACTGCTGCATTTAGGCCAGGTCTC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGGAGCTCAGGTTTTCTaGTTCAGAGAAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSGAQVF*FREVWM
Trigger: CATCCAGACTTCTCTGAAGCAGAAAACCTGAGCTCC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCACAGCAACAGCAAACTaGTCTTGTGTGTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSTATAN*SCVCER
Trigger: TCTCTCACACACACAAGAGCAGTTTGCTGTTGCTGT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGCAGACATGCACCCATaGACCCTGGTGGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHADMHP*TLVAPY
Trigger: ATATGGGGCCACCAGGGTGCATGGGTGCATGTCTGC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATATCTGTGGCCGGCAGTaGTCACTTCCAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYICGRQ*SLPGLG
Trigger: GCCTAGCCCTGGAAGTGAGCACTGCCGGCCACAGAT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCCGTCTTCGTGTCCCTaGAGCTTTGGCATTTTGATA +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTPSSCP*SFGILI
Trigger: TATCAAAATGCCAAAGCTGCAGGGACACGAAGACGG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCCGTCTTCGTGTCCCTaGAGCTTTGGCATTTTGATA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSPSSCP*SFGILI
Trigger: TATCAAAATGCCAAAGCTGCAGGGACACGAAGACGG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTGTCACATAAACGGTaGTGCCTAAAACAGTATGGA +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELLSHKR*CLKQYG
Trigger: TCCATACTGTTTTAGGCAGCACCGTTTATGTGACAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTGCTGCCCAGCATTCTaGCCGCGAGGAGCGCATGGA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWCCPAF*PRGAHG
Trigger: TCCATGCGCTCCTCGCGGGCAGAATGCTGGGCAGCA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTTGCGCCTTGGCCTTaGTGGAGAGCAGCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHFAPWP*WRAARR
Trigger: ACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGGCCCAGAGCTCTTTTaGGCCTTGGCCTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIGPELF*ALALLE
Trigger: CTCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATTGGCTGAAGAGCAGCTaGTCCAGGTCTCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYWLKSS*SRSPST
Trigger: CGTGCTGGGAGACCTGGAGCAGCTGCTCTTCAGCCA...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGAGGCTGGACACGCTaGGTGGGTTGGCATCATCGC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRGWTR*VGWHHR
Trigger: GCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGGTTTCTGGTCAGTTTaGAACCTGTACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIGFWSV*NLYWKG
Trigger: CCCCTTCCAGTACAGGTTGCAAACTGACCAGAAACC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGGACCAATCATGTGCCTaGACAGTTACGTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQDQSCA*TVTWHE
Trigger: TTCATGCCACGTAACTGTGCAGGCACATGATTGGTC...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGAACTACTGCGGAAATTaGAGACATGGTTACTTTTGT +
Preference number: 4 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKNYCGN*RHGYFC
Trigger: ACAAAAGTAACCATGTCTGCAATTTCCGCAGTAGTT...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCCAAGAACCCCTGTATaGTCTTCTGTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EGYQRALWIRGRLVRKGAPRTPV*SSVLPF
Trigger: GAAAGGCAGCACAGAAGAGCATACAGGGGTTCTTGG...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCCTTTCACCCACTGTaGAGGCAACATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGESTTAWLEEVASFLPMSFHPL*RQHLSS
Trigger: AGAAGACAGATGTTGCCTGCACAGTGGGTGAAAGGA...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CATCTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACTTTTGGTTTAACTCCTaGATTGTGGAGTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HLPKETAQKRQLGMKESDFWFNS*IVEWAG
Trigger: GCCGGCCCACTCCACAATGCAGGAGTTAAACCAAAA...GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAAAAGGTATGAGCTGTaGGCCACGCGGAGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHKRYEL*ATRRVG
Trigger: TCCGACCCTCCGCGTGGCCCACAGCTCATACCTTTT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367295.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTCAGTTCTCCACCCTTaGATGAATCATCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSVLHP*MNHHSS
Trigger: AGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTCAGAGGAGGAGCGTTaGAGCCCAGTATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSEEER*SPVFFT
Trigger: AGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTGATTGACAGGGGCTaGAGTGGTCCGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLIDRG*SGPPTG
Trigger: GCCAGTGGGCGGACCACTCCAGCCCCTGTCAATCAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTTGGGAGTACTTTCTaGGGAGCCAATACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLGSTF*GANTLQ
Trigger: TTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGCAGCTCTGCCAGCTTaGTGGCTGTGGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKAALPA*WLWGGL
Trigger: CAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTGCTGGGGAAGGCACTaGGGAGGCTCATTGGCATCT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHCWGRH*GGSLAS
Trigger: AGATGCCAATGAGCCTCCCCAGTGCCTTCCCCAGCA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGGGTGCTCCCCATTTaGGAGCCGCTGTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRVLPI*EPLYSS
Trigger: CGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAGGTGGAGGAGGCACTaGAGGCCAGGGACAGCACTG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRWRRH*RPGTAL
Trigger: CAGTGCTGTCCCTGGCCTCCAGTGCCTCCTCCACCT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGGTGGCCACTTTTTCCTaGGATGATTCCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQVATFS*DDSSSL
Trigger: TAGGGAACTGGAATCATCCCAGGAAAAAGTGGCCAC...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCACTGCATGTTGTGCATaGTCTCCCGAAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGITACCA*SPEADP
Trigger: TGGATCAGCTTCGGGAGACCATGCACAACATGCAGT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTGGGGCCGAAGGAATaGGTGAGTGCCAGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLGPKE*VSARPR
Trigger: CCTAGGCCTGGCACTCACCCATTCCTTCGGCCCCAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGGTCACTTCCTCCTTTaGACCACAAGTACTGATGCC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWGHFLL*TTSTDA
Trigger: GGCATCAGTACTTGTGGTCCAAAGGAGGAAGTGACC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGTCACTTCCTCCTTTaGACCACAAGTACTGATGCC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGHFLL*TTSTDA
Trigger: GGCATCAGTACTTGTGGTCCAAAGGAGGAAGTGACC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTCCCAGGGTAGAGGCTaGGTCCATTTTAGAAATATA +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELSQGRG*VHFRNI
Trigger: TATATTTCTAAAATGGACCCAGCCTCTACCCTGGGA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTGCTGTAGCCATGGATaGACTCAGTGCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGICCSHG*TQCLVP
Trigger: TGGGACTAAGCACTGAGTCCATCCATGGCTACAGCA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCTGCATCATCGGCTTaGGGATCAGCGTCTCGAACA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCAASSA*GSASRT
Trigger: TGTTCGAGACGCTGATCCCCAAGCCGATGATGCAGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCACTCGGCCAAGCGATTaGTCAGGTAGGTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGTRPSD*SGRSCP
Trigger: CGGGCAAGACCTACCTGACCAATCGCTTGGCCGAGT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCCCGGTCTATCTGGTTaGCTAGGTTGGAAAGATACA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSPGLSG*LGWKDT
Trigger: TGTATCTTTCCAACCTAGCCAACCAGATAGACCGGG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATGTGAGGGCCCACGGTaGGTGGGGGCAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRCEGPR*VGAGGT
Trigger: TGTACCACCTGCCCCCACCCACCGTGGGCCCTCACA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTTCTCCTCCTGGGGCTaGAGAGCCAGTGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCFSSWG*RASALK
Trigger: TTTCAGAGCACTGGCTCTCCAGCCCCAGGAGGAGAA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTCCTGTTCTCCTCCTaGGGCTGGAGAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLLFSS*GWRASA
Trigger: AGCACTGGCTCTCCAGCCCCAGGAGGAGAACAGGAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTCTACCTTGGCAACTaGTTCCTCTCTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLYLGN*FLSLQL
Trigger: AAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGCCAAACTAGCCCCTaGAAAAGCAACCCAAGCATC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISQTSP*KSNPSI
Trigger: GATGCTTGGGTTGCTTTTCCAGGGGCTAGTTTGGCT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCAAAGAAAACCCACTTaGAAAAGCCAAACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLQRKPT*KSQTSP
Trigger: GGGGCTAGTTTGGCTTTTCCAAGTGGGTTTTCTTTG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGTCATGCCAATTGCATaGCATCAGATTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WAPARSLGEELLAVVMELVMPIA*HQILQR
Trigger: TCTTTGGAGAATCTGATGCCATGCAATTGGCATGAC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGGAAGTCAAGGGAACTaGGTTCCTCTTCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYGSQGN*VPLLPL
Trigger: TAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGTGAAAGGCCAAACTaGCCACAAGACAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSERPN*PQDRGM
Trigger: CATTCCTCTGTCTTGTGGCCAGTTTGGCCTTTCACT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTGGAAGGCAGGTATTaGCCACCAAGTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTLEGRY*PPSQTP
Trigger: AGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAAGGTAGGATCTCTTTaGAAGGCAGGTATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSKVGSL*KAGIGH
Trigger: GTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGGGGCGTAGCTGAATaGAGGTTAACATTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGGVAE*RLTFPA
Trigger: AGCAGGAAATGTTAACCTCCATTCAGCTACGCCCCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGCTCAGCCTAGAAGCTaGTCCCGCGGGGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSAQPRS*SRGAFR
Trigger: TCTGAAAGCCCCGCGGGACCAGCTTCTAGGCTGAGC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGAACCCTGTCATCCATaGGAGCTTACCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGEPCHP*ELTTWM
Trigger: CATCCACGTGGTAAGCTCCCATGGATGACAGGGTTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTGCAGGGTTTCTATGTaGATGCCATCCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYCRVSM*MPSQVR
Trigger: CCTCACTTGGGATGGCATCCACATAGAAACCCTGCA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTATGGCCTTCTCAGTaGAGCCATGAGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLWPSQ*SHEPEL
Trigger: AAGTTCTGGCTCATGGCTCCACTGAGAAGGCCATAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGAGCTGAGTGGAGTGTaGATAAGGGGCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGELSGV*IRGLPG
Trigger: CCCAGGAAGGCCCCTTATCCACACTCCACTCAGCTC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTCAGGCATAGAGAAATaGCAGAGGAGCAGTAAGACC +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSGIEK*QRSSKT
Trigger: GGTCTTACTGCTCCTCTGCCATTTCTCTATGCCTGA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCAGTCAAAGGAAGGATaGAAGCCCCGCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHQSKEG*KPRGSS
Trigger: GGAGGAGCCGCGGGGCTTCCATCCTTCCTTTGACTG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCGAGTGCTCCGACTTaGACAGCGTCTTGGACATCA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCASAPT*TASWTS
Trigger: TGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGAGGGGACGAGCGGTTaGAGAGGCTGGACACGCTGC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTREGTSG*RGWTRC
Trigger: GCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTCCAGGCGGGAGATATaGCTGAGCTTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSRREI*LSLLGL
Trigger: CAGCCCCAGCAAGCTCAGCCATATCTCCCGCCTGGA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTTTTTCTTCTTTCCCTaGGTGCCTTGTCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSFFFFP*VPCLSP
Trigger: TGGCGAGAGACAAGGCACCCAGGGAAAGAAGAAAAA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAAGCGTGGTGGCCGCAGTaGGACTCACCCTTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQAWWPQ*DSPFAH
Trigger: ATGGGCAAAGGGTGAGTCCCACTGCGGCCACCACGC...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGATCATGGCACTCACATTaGCAGAAAGCTGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRSWHSH*QKAETS
Trigger: TGACGTCTCAGCTTTCTGCCAATGTGAGTGCCATGA...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTTCTTTCCGTACTTCATaGCACTCACATTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPSFRTS*HSHWQK
Trigger: TTTCTGCCAATGTGAGTGCCATGAAGTACGGAAAGA...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGGCCTGCACAGTTACGTaGCATGAACAAAGACATGAA +
Preference number: 4 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWACTVT*HEQRHE
Trigger: TTCATGTCTTTGTTCATGCCACGTAACTGTGCAGGC...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAGCTTTGGGGGAAAATaGCTCTTATGTTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEASFGGK*LLCSLF
Trigger: AAACAGAGAACATAAGAGCCATTTTCCCCCAAAGCT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCGCTGCTGAAATGTGTTaGAAACATTCAGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGAAEMC*KHSESW
Trigger: CCAAGATTCTGAATGTTTCCAACACATTTCAGCAGC...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGAGAAAGGGGAGCACTTaGGGATGGAGAAATAGCCAT +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQRKGST*GWRNSH
Trigger: ATGGCTATTTCTCCATCCCCAAGTGCTCCCCTTTCT...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGAGGCATTCCACCGTTTaGCCACTAGGTGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRRHSTV*PLGVRS
Trigger: AGACCTGACACCTAGTGGCCAAACGGTGGAATGCCT...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCAGGGTGGCCCAGGCTaGTGGGCTTTTTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHQGGPG*WAFSVL
Trigger: GAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCTG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACCCGATCTGTCTGATTaGCAGGGGCTGGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKPDLSD*QGLEWS
Trigger: GGACCACTCCAGCCCCTGTCAATCAGACAGATCGGG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGGGCCCCCAGATGCTaGGCTTGTAGCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSRAPRC*ACSMQI
Trigger: GATCTGCATGCTACAAGCTCAGCATCTGGGGGCCCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCTGGGAGAAGCTGGCTaGGTTAATATTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPLGEAG*VNIEDG
Trigger: CCCATCCTCAATATTAACTCAGCCAGCTTCTCCCAG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTCTCTTTTGGCACACTaGAACCACTCATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSSLLAH*NHSLAP
Trigger: TGGAGCTAATGAGTGGTTTCAGTGTGCCAAAAGAGA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGGAGAAGGCAGCTCTaGCTGGTCATCGGATTCAGG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGRRQL*LVIGFR
Trigger: CCTGAATCCGATGACCAGTCAGAGCTGCCTTCTCCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWALAES*DVKVAT
Trigger: AGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAGAAGGTCAACATCCTaGAGCTCAAGTGCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVRRSTS*SSSASH
Trigger: ATGGCTTGCACTTGAGCTTCAGGATGTTGACCTTCT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAGAAGCAAGGGCCGATaGGGAAGTCTGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWRSKGR*GSLRCC
Trigger: ACAGCACCTCAGACTTCCTCATCGGCCCTTGCTTCT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTGTTCCACAGGTCAATaGACCAGGTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCCSTGQ*TRSGSP
Trigger: AGGACTTCCGGACCTGGTTCATTGACCTGTGGAACA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTCTCAGGGTTGCTTGTaGGAATCATTTAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSSQGCL*ESFRNC
Trigger: GCAGTTCCTAAATGATTCTCACAAGCAACCCTGAGA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACATTTTTGTGGTTTGGTaGCTTCTCAGGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYIFVVW*LLRLAA
Trigger: GGCTGCCAACCTGAGAAGTCACCAAACCACAAAAAT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGGCTATACCTTCTCATaGCAGAGGCTGGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPGYTFS*QRLAIE
Trigger: CTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACATGCAGAAGCTTTTGTaGGGGGCAGCCCGGACCATC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHMQKLL*GAARTI
Trigger: GATGGTCCGGGCTGCCCCTCACAAAAGCTTCTGCAT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTCAGAGAAGTCTGGATaGGTGTCCCAAGGGGTTATA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSEKSG*VSQGVI
Trigger: TATAACCCCTTGGGACACTCATCCAGACTTCTCTGA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCCAGTGTTTCTTTTCTaGAGGATCCCAGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTPVFLF*RIPVVS
Trigger: TGAGACTACTGGGATCCTTCAGAAAAGAAACACTGG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAAGGTGCCTGGCGGTTaGGAATTTAGCTATGGGACC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCKVPGG*EFSYGT
Trigger: GGTCCCATAGCTAAATTCTCAACCGCCAGGCACCTT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGATGCCATCCCAAGTaGGGATGTGAGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGCHPK*GCEVSV
Trigger: CACAGACACCTCACATCCTCACTTGGGATGGCATCC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCCTGTGTTAAATGTGTaGTTAGGACAATTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYPVLNV*LGQFPR
Trigger: GCGGGGGAATTGTCCTAATCACACATTTAACACAGG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCCTGTGTTAAATGTGTaGTTAGGACAATTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWPVLNV*LGQFPR
Trigger: GCGGGGGAATTGTCCTAATCACACATTTAACACAGG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCACTGCTTTAAGGAATaGGAAACCAGGGGATCACTC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVHCFKE*ETRGSL
Trigger: GAGTGATCCCCTGGTTTCTCATTCCTTAAAGCAGTG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGCACACCAGCCTGGGTaGCAAAGCGAGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAAHQPG*QSETPS
Trigger: AGAAGGAGTCTCGCTTTGTCACCCAGGCTGGTGTGC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTTAAAATGAATTACTaGGGGGACAGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYFKMNY*GDSPAL
Trigger: GAGAGCCGGGCTGTCCCCTCAGTAATTCATTTTAAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGAAAAGAGAGGTTGGTaGGTGACTTCTGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGEKRGW*VTSACA
Trigger: TGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTCATGTAGCCGGACTTaGGGTCCACCTCATCCGAGT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSCSRT*GPPHPS
Trigger: ACTCGGATGAGGTGGACCTCAAGTCCGGCTACATGA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCAACTGGTACAACTTATaGATTGAGGGTTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGNWYNL*IEGLGK
Trigger: TTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTT...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGGTCAGGTCTGTTTCATaGGGAGTGAAGGATACCAAA +
Preference number: 4 (lower is better)
Translates to: RGESTTAWLEEVASFLPMVRSVS*GVKDTK
Trigger: TTTGGTATCCTTCACTCCTCATGAAACAGACCTGAC...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTATTGTTGAGTTCCTaGGAGAAGCAGTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLLLSS*EKQWEY
Trigger: GTACTCCCACTGCTTCTCGCAGGAACTCAACAATAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTCTGGAGGGACTCCATaGTCCTGTGCAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSGGTP*SCAGLR
Trigger: TCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTCTGGAGGGACTCCATaGTCCTGTGCAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWSGGTP*SCAGLR
Trigger: TCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGGCTCCCTGAATGACTaGCTGGGCCTCAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHGSLND*LGLRVL
Trigger: AAGAACTCTGAGGCCCAGGCAGTCATTCAGGGAGCC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGATGATCCAGGGACCTaGCCTGGAGTGGAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDADDPGT*PGVEPD
Trigger: ATCAGGCTCCACTCCAGGGCAGGTCCCTGGATCATC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCATCCCCTTTGATGATGTaGTGCGGGGGCATCCTCACC +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSSPLMM*CGGILT
Trigger: GGTGAGGATGCCCCCGCAGCACATCATCAAAGGGGA...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGGAAGAATTCCTGCTaGTTCAAGTCCCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRKNSC*FKSPLM
Trigger: CATCAAAGGGGACTTGAAGCAGCAGGAATTCTTCCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGAACCCTTAAAGTGTTaGCTGAAGGTTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPEPLKC*LKVGVQ
Trigger: CTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAGGTGTCATGCCAATTaGATGGCATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSRCHAN*MASDSP
Trigger: TGGAGAATCTGATGCCATGCAATTGGCATGACACCT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGACCCAGCAGAACGTGTaGTCTCAAAAGGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVTQQNV*SQKGSQ
Trigger: TTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAAACACTTAGGCCGGTaGTCATCACATATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSKHLGR*SSHILD
Trigger: GTCAAGGATATGTGATGAGCACCGGCCTAAGTGTTT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGAGACCTGGCCTAAATaGAGCAGTCAGCTGAGAGTA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGETWPK*SSQLRV
Trigger: TACTCTCAGCTGACTGCTGCATTTAGGCCAGGTCTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCAGTTGAATTTAGTGTaGATCAGAATCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSQLNLV*IRITRR
Trigger: CCTCCTGGTGATTCTGATGCACACTAAATTCAACTG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGAAGAGACCTCCAACTaGTTTTCCTTGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWEETSN*FSLLKP
Trigger: GGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATCTGTATCCAGGTCCTaGTGTGGGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSVSRS*CGEKRG
Trigger: TCCTCTCTTTTCCCCACAGCAGGACCTGGATACAGA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGGTGGGACTCACCCTTTaGCCATTGCTGGGATTACAG +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKVGLTL*PLLGLQ
Trigger: CTGTAATCCCAGCAATGGGCAAAGGGTGAGTCCCAC...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGAGGGCTAAGCAGTGGTaGTGCAGAAAGGCTAGCATT +
Preference number: 4 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRRAKQW*CRKASI
Trigger: AATGCTAGCCTTTCTGCAGCACCACTGCTTAGCCCT...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTGCTTCTCTACATCCTaGATGTCTGCTTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: RGESTTAWLEEVASFLPMCFSTS*MSACRL
Trigger: GAGTCTACAAGCAGACATGCAGGATGTAGAGAAGCA...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGCACCCTTTCTTGCTTTaGAGCTGCTCCTTGTTCCCG +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKHPFLL*SCSLFP
Trigger: CGGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTG...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACCGTTCTTCCGGATCTaGGCAGGGGCAGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSPFFRI*AGADEA
Trigger: TGCTTCATCTGCCCCTGCCCAGATCCGGAAGAACGG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367295.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTCAGAGGAGGAGCGTTaGAGCCCAGTATTCTTCACT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPSEEER*SPVFFT
Trigger: AGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACAAAGGATCCCGAAGTaGAGGGGCGAGCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKQRIPK*RGEQCP
Trigger: CGGGCATTGCTCGCCCCTCCACTTCGGGATCCTTTG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTGGGAGTACTTTCTaGGGAGCCAATACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLGSTF*GANTLQ
Trigger: TTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGGACCTTTGAAGCATaGGTGGTATCACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGTFEA*VVSLDD
Trigger: ATCATCCAGTGATACCACCCATGCTTCAAAGGTCCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCATGCGGGTCTCTTTTaGCACACTGAAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVHAGLF*HTETTH
Trigger: ATGAGTGGTTTCAGTGTGCCAAAAGAGACCCGCATG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGACTGGGGAGGCTCATTaGCATCTGGAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWTGEAH*HLEGLH
Trigger: ATGGAGTCCCTCCAGATGCCAATGAGCCTCCCCAGT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCAGGCAGCCCACCAATaGTATGGGAATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHQAAHQ*YGNVAS
Trigger: AGAGGCGACATTCCCATACCATTGGTGGGCTGCCTG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCGTGAACATCGTCCGTaGGGTCTCGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYREHRP*GLGRIL
Trigger: CAGGATCCTTCCGAGACCCCACGGACGATGTTCACG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAACCATGCTGTAGTTTaGGGGATGAGGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCNHAVV*GMRGLK
Trigger: CTTCAGCCCCCTCATCCCCCAAACTACAGCATGGTT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCACTGCATGTTGTGCATaGTCTCCCGAAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPTACCA*SPEADP
Trigger: TGGATCAGCTTCGGGAGACCATGCACAACATGCAGT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTGCTGTAGCCATGGATaGACTCAGTGCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPCCSHG*TQCLVP
Trigger: TGGGACTAAGCACTGAGTCCATCCATGGCTACAGCA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTACTCGGCCAAGCGATTaGTCAGGTAGGTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGITRPSD*SGRSCP
Trigger: CGGGCAAGACCTACCTGACCAATCGCTTGGCCGAGT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTTTCCCGGTCTATCTaGTTGGCTAGGTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVSRSI*LARLER
Trigger: TCTTTCCAACCTAGCCAACCAGATAGACCGGGAAAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAGTGCAAGCCATGGTTaGGTGTCATTTTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSASHG*VSFLQA
Trigger: AGCCTGTAAAAATGACACCCAACCATGGCTTGCACT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCTCAAGTGCAAGCCATaGTTGGGTGTCATTTTTACA +
Preference number: 4 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSLKCKP*LGVIFT
Trigger: TGTAAAAATGACACCCAACCATGGCTTGCACTTGAG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCAGGAAGCCATTGGCTaGCTCCACGTTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCQEAIG*LHVVGE
Trigger: TTCTCCAACAACGTGGAGCCAGCCAATGGCTTCCTG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGATGATACCACAGCTTaGGTACCCAGTCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGDDTTA*VPSRAP
Trigger: GGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGCAGCTTTCTGTCCATaGACCTTTATCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVAAFCP*TFIPSL
Trigger: CAAGGATGGGATAAAGGTCCATGGACAGAAAGCTGC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACCGGACCCATTCCACTaGGTCCTCCCAAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSPDPFH*VLPSSF
Trigger: AAAGCTGCTTGGGAGGACCCAGTGGAATGGGTCCGG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACCGGACCCATTCCACTaGGTCCTCCCAAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAPDPFH*VLPSSF
Trigger: AAAGCTGCTTGGGAGGACCCAGTGGAATGGGTCCGG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTGGTACAGCTTTGATTaGTCTTGTTGGGCTGATGGC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVWYSFD*SCWADG
Trigger: GCCATCAGCCCAACAAGACCAATCAAAGCTGTACCA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTCCTGTTCTCCTCCTaGGGCTGGAGAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLLFSS*GWRASA
Trigger: AGCACTGGCTCTCCAGCCCCAGGAGGAGAACAGGAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTCCAGCCAGATCTCTaGGGGAGGAGTTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLQPDL*GRSCWQ
Trigger: CTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACTCCAGCCAGATCTCTaGGGGAGGAGTTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSLQPDL*GRSCWQ
Trigger: CTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCCAAAGATAGTGGCATaGCAGGTGTCATGCCAATTG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYPKIVA*QVSCQL
Trigger: CAATTGGCATGACACCTGCCATGCCACTATCTTTGG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTTTCTGGTTTTCCTCTaGTCCATGATAAAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLFLVFL*SMIKLG
Trigger: TCCGAGCTTTATCATGGACCAGAGGAAAACCAGAAA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGTGAAAGGCCAAACTaGCCACAAGACAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSERPN*PQDRGM
Trigger: CATTCCTCTGTCTTGTGGCCAGTTTGGCCTTTCACT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTTGGAAGGCAGGTATTaGCCACCAAGTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILEGRY*PPSQTP
Trigger: AGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTTGGAAGGCAGGTATTaGCCACCAAGTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLEGRY*PPSQTP
Trigger: AGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGACCTTCAAGGCAATaGGAAAGGAGCAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRPSRQ*ERSKSA
Trigger: TGCAGATTTGCTCCTTTCCCATTGCCTTGAAGGTCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTTTCAGCACCATCCTTaGACACACAGCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPFQHHP*THSLFP
Trigger: TGGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCAGAAGGCACTGGCTaGGCAGCACCAGAAAATAGA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCAEGTG*AAPENR
Trigger: TCTATTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGAGAGTAGAGGGTGGTaGATCCCAGGAAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVESRGW*IPGREI
Trigger: TATTTCTCTTCCTGGGATCCACCACCCTCTACTCTC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCAAGCAATTGGAGACCTaGCCTAAATGCAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIKQLET*PKCSSQ
Trigger: CTGACTGCTGCATTTAGGCCAGGTCTCCAATTGCTT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCAAGGCTACATCTTCTaGGTTACTACCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVQGYIF*VTTTFP
Trigger: GGGAAAGGTGGTAGTAACCCAGAAGATGTAGCCTTG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGTGTCCCTGCAGCTTTaGCATTTTGATAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTVSLQL*HFDRYP
Trigger: AGGATACCTATCAAAATGCCAAAGCTGCAGGGACAC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGAACCTTCTTATTTTaGGCCCCAAAGCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRTFLF*APKPLS
Trigger: ACTGAGAGGCTTTGGGGCCCAAAATAAGAAGGTTCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAAGGAGGTTCTGGCCTaGTTCTCAGGCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWKEVLA*FSGPAV
Trigger: CACTGCTGGGCCTGAGAACCAGGCCAGAACCTCCTT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGATAAGGGGCCTTCCTaGGATACTGGAGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWDKGPS*DTGALH
Trigger: GTGTAGGGCTCCAGTATCCCAGGAAGGCCCCTTATC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAAAAGCATTAGAAAGTaGGAGCCACTGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTKSIRK*EPLHSS
Trigger: ACTGCTGTGCAGTGGCTCCCACTTTCTAATGCTTTT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCAGGAGACATGCCAGATaGACAGAGGGCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGRRHAR*TEGPDW
Trigger: CCAATCTGGGCCCTCTGTCCATCTGGCATGTCTCCT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGCGGTGCTTTTGCTTTaGTGTCCGGATCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKAVLLL*CPDPSP
Trigger: CGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAGCCTTTGGGCGCCTTaGCCATATCGTCGCTCCATT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWSLWAP*PYRRSI
Trigger: AATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGACACGCTGCGTGGGTTaGCATCATCGCTGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWTRCVG*HHRCRS
Trigger: GCTACGACAGCGATGATGCCAACCCACGCAGCGTGT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCTTTCGGGGTTGTCCTaGGACTATTCCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLSGLS*DYSMGS
Trigger: GCTCCCCATGGAATAGTCCCAGGACAACCCCGAAAG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCAGGCTCCAAAGACCTaGGGGTCCCAGAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCQAPKT*GSQNFC
Trigger: ACAAAAGTTCTGGGACCCCCAGGTCTTTGGAGCCTG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGCTCCATACAGGCAGGTaGATGTCTAATCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: LPKETAQKRQLGMKESDQLHTGR*MSNLSI
Trigger: TATGGACAGATTAGACATCCACCTGCCTGTATGGAG...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTCGGAAATTGCAGACATaGTTACTTTTGTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: SREHRPWGLGRILTESFPRKLQT*LLLCKH
Trigger: GTGTTTGCACAAAAGTAACCATGTCTGCAATTTCCG...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGGACAAAAGTTTGGTTTaGAGTCACGGAATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWDKSLV*SHGILK
Trigger: CTTCAGGATTCCGTGACTCCAAACCAAACTTTTGTC...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCGGGAGCACTTGGGGATaGAGAAATAGCCATCGTGAG +
Preference number: 4 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLGSTWG*RNSHRE
Trigger: CTCACGATGGCTATTTCTCCATCCCCAAGTGCTCCC...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CGGCACTCTCATGGCTCCTACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACGACCAAATAATCTCCTaGCAGAAACTATTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: RHSHGSYWLTILPPCWVNDQIIS*QKLFGA
Trigger: CGCACCAAATAGTTTCTGCCAGGAGATTATTTGGTC...GTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGTAGGAGCCATGAGAGTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp CAAAGGCTGCTGATGCTGCTGGTCTTGTGCCATACTTaGCGAACCACTGCTTTAAGGAATGAGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLLMLLVLCHT*RTTALRNEKPG
Trigger: CCCTGGTTTCTCATTCCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGACCAGCAGCATCAGCAGCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGCCCATTTACTGGCTTaGCAGGGATGCCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYAHLLA*QGCLRT
Trigger: AGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACACGCTCATAGAACTTaGCTTGGCTGGCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRHAHRT*LGWPGQ
Trigger: CTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCAAGGAGATGTTGTCTaGGTCCAAGGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGQGDVV*VQGHCL
Trigger: AAGGCAGTGGCCTTGGACTCAGACAACATCTCCTTG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCTAGTGAGGGTGGTTTaGCAAAGCTCTTCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGLVRVV*QSSSLW
Trigger: CCACAGCGAAGAGCTTTGTCAAACCACCCTCACTAG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGATGCCATCCATGGGTaGCAGGTCTGTGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHDAIHG*QVCVCK
Trigger: CTTGCAGACACAGACCTGTCACCCATGGATGGCATC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCTCGTTTCACGTGGCTaGTGCTGTAGCCATGGATGG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYLVSRG*CCSHGW
Trigger: CCATCCATGGCTACAGCATCAGCCACGTGAAACGAG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACACCTTTGAGGGAGACTaGTATGTTATTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYTFEGD*YVIDTS
Trigger: CGAGGTGTCAATAACATATCAGTCTCCCTCAAAGGT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTCTCCTTCAGACCTTTaGGGGAGACTGATATGTTAT +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSSPSDL*GRLICY
Trigger: ATAACATATCAGTCTCCCTCAAAGGTCTGAAGGAGA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATTTGGGGTGCTGTCTTTaGCTGTCCTATCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYLGCCL*LSYPRE
Trigger: CTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAA...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTGGGGTGCTGTCTTTaGCTGTCCTATCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHLGCCL*LSYPRE
Trigger: CTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHWQPSC*CPLCHP
Trigger: TGGATGACATAGGGGACATCAACAAGACGGCTGCCA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGACTTGCCCATTCCTaGCAAGCAAGATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYRLAHS*QARFHS
Trigger: ACTATGGAATCTTGCTTGTCAGGAATGGGCAAGTCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGATGCCATCCCAAGTaGGGATGTGAGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGCHPK*GCEVSV
Trigger: CACAGACACCTCACATCCTCACTTGGGATGGCATCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAGGAACTGCGCTTGGTaGTCTGGGTCACTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIRNCAW*SGSLQH
Trigger: GTGCTGAAGTGACCCAGATCACCAAGCGCAGTTCCT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGGAACTGCGCTTGGTaGTCTGGGTCACTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDARNCAW*SGSLQH
Trigger: GTGCTGAAGTGACCCAGATCACCAAGCGCAGTTCCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACACAGGGGTTGGCTTATaGAGTCGGCTTCTTAACTTT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYTGVGL*SRLLNF
Trigger: AAAGTTAAGAAGCCGACTTCATAAGCCAACCCCTGT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGATGGTAGCTCTGCCTTaGTATCATCTTCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWMVALP*YHLRVF
Trigger: GAAGACACGAAGATGATATCAAGGCAGAGCTACCAT...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAAACGCAAATGGCATTaGACAGATGAATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSKRKWH*TDESCW
Trigger: CCAGCAAGATTCATCTGTTCAATGCCATTTGCGTTT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAAATCCCATCTCCTGCTTaGGGGCAGGGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQIPSPA*GQGSDP
Trigger: AGGGTCAGAACCCTGCCCTCAAGCAGGAGATGGGAT...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGCCCTCAGGTTTGCCTaGGACTTTGAGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWALRFA*DFEGTL
Trigger: CAGAGTGCCCTCAAAGTCGCAGGCAAACCTGAGGGC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGCTGAGCTTGTAGCATaGAGATCTGGGACCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPAELVA*RSGTFE
Trigger: TTCAAAGGTCCCAGATCTGCATGCTACAAGCTCAGC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTCGAAGCTTCCGGATTTaGTCAGATTGCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCRSFRI*SDCILS
Trigger: GGAGAGGATGCAATCTGAGCAAATCCGGAAGCTTCG...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTCCCCTTTGATGATGTaGTGCGGGGGCATCCTCACC +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWSPLMM*CGGILT
Trigger: GGTGAGGATGCCCCCGCAGCACATCATCAAAGGGGA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTTGCAAGACTGCTGGTaGATGTTGAAGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCLQDCW*MLKVLT
Trigger: CGTCAGCACCTTCAACATGCACCAGCAGTCTTGCAA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTATCCTGAAGCTCAAGTaGAAGCCATGGTTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCILKLK*KPWLGV
Trigger: GACACCCAACCATGGCTTGCACTTGAGCTTCAGGAT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTCCGGAAGTCCTCAATaGCAATGGGACACGACAGAA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSGSPQ*QWDTTE
Trigger: TTCTGTCGTGTCCCATTGGCATTGAGGACTTCCGGA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAGGTGTCATGCCAATTaGATGGCATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVRCHAN*MASDSP
Trigger: TGGAGAATCTGATGCCATGCAATTGGCATGACACCT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAGCCTAGAGACTGGCTaGGATATGGTAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSLETG*DMVALP
Trigger: AGGCAGAGCTACCATATCGCAGCCAGTCTCTAGGCT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTCACATAAACGGTGCTaGCTAAAACAGTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSHKRC*LKQYGG
Trigger: GCCTCCATACTGTTTTAGGCAGCACCGTTTATGTGA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTGTCACATAAACGGTaGTGCCTAAAACAGTATGGA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLSHKR*CLKQYG
Trigger: TCCATACTGTTTTAGGCAGCACCGTTTATGTGACAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATGGCTGAAGAGCAGCTaGTCCAGGTCTCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRWLKSS*SRSPST
Trigger: CGTGCTGGGAGACCTGGAGCAGCTGCTCTTCAGCCA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAAGAGGCTGGACACGCTaGGTGGGTTGGCATCATCGC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRRGWTR*VGWHHR
Trigger: GCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTCTTCTTTCCCTGGGTaGCTTGTCTCTCGCCAATTC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSSFPG*LVSRQF
Trigger: GAATTGGCGAGAGACAAGGCACCCAGGGAAAGAAGA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGCCTTGTCTATTCTTCTaGCTCCATACAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKPCLFF*LHTGRW
Trigger: CCACCTGCCTGTATGGAGGCAGAAGAATAGACAAGG...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCATTATAATCCATAACTaGTTTTGTCCATGGCCAATG +
Preference number: 4 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGIIIHN*FCPWPM
Trigger: CATTGGCCATGGACAAAAGCAGTTATGGATTATAAT...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTCAGTTCTCCACCCTTaGATGAATCATCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISVLHP*MNHHSS
Trigger: AGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGGCAGGCTGCGGTACTaGATGTTAGAACGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWGRLRY*MLERAP
Trigger: TGGAGCCCGTTCTAACATCCAGTACCGCAGCCTGCC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGCTTGCTTGGTTCTTaGGAGTACTTTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGLLGS*EYFLGS
Trigger: GCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGCAGGCCTGAGAGTTTaGGGTACATGCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIAGLRV*GTCGSL
Trigger: AAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGCAGGCCTGAGAGTTTaGGGTACATGCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYAGLRV*GTCGSL
Trigger: AAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGGCTCATTGGCATCTaGAGGGACTCCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWRLIGI*RDSMLL
Trigger: CAGGAGCATGGAGTCCCTCCAGATGCCAATGAGCCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGGCTCATTGGCATCTaGAGGGACTCCATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRLIGI*RDSMLL
Trigger: CAGGAGCATGGAGTCCCTCCAGATGCCAATGAGCCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTACTGGGGAGGCTCATTaGCATCTGGAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGITGEAH*HLEGLH
Trigger: ATGGAGTCCCTCCAGATGCCAATGAGCCTCCCCAGT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACCAGTTGCCCAGCTCTaGGGCTTCCACTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKPVAQL*GFHSKS
Trigger: TGACTTGGAGTGGAAGCCCCAGAGCTGGGCAACTGG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCAGCCCACCAATGGTATaGGAATGTCGCCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGSPPMV*ECRLSL
Trigger: CAAGGAGAGGCGACATTCCCATACCATTGGTGGGCT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCAGGCAGCCCACCAATaGTATGGGAATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWQAAHQ*YGNVAS
Trigger: AGAGGCGACATTCCCATACCATTGGTGGGCTGCCTG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGAAGGCAGCTCTGACTaGTCATCGGATTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAEGSSD*SSDSGS
Trigger: GCTGCCTGAATCCGATGACCAGTCAGAGCTGCCTTC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTGCACTCAGAGACATaGGAAGTGCAGGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLHSET*EVQGEK
Trigger: CTTCTCCCCCTGCACTTCCCATGTCTCTGAGTGCAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGACTATGTTGGTAAGTTaGCCCTTTGCACTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVTMLVS*PFALRD
Trigger: GTCTCTGAGTGCAAAGGGCCAACTTACCAACATAGT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCTGAGACGTCAAGGTaGCCACTTTTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAETSR*PLFPGM
Trigger: CATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTCTTCAGAAAGTCTATaGTTTCTCGCAAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRSSESL*FLANPA
Trigger: TGCTGGATTTGCGAGAAACCATAGACTTTCTGAAGA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAGTGCAAGCCATGGTTaGGTGTCATTTTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSASHG*VSFLQA
Trigger: AGCCTGTAAAAATGACACCCAACCATGGCTTGCACT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGTGCAAGCCATGGTTaGGTGTCATTTTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISASHG*VSFLQA
Trigger: AGCCTGTAAAAATGACACCCAACCATGGCTTGCACT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCAGGAAGCCATTGGCTaGCTCCACGTTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGQEAIG*LHVVGE
Trigger: TTCTCCAACAACGTGGAGCCAGCCAATGGCTTCCTG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGAACCAGGAAGCCATTaGCTGGCTCCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSEPGSH*LAPRCW
Trigger: CCAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGAACCAGGAAGCCATTaGCTGGCTCCACGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHEPGSH*LAPRCW
Trigger: CCAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGCAGCTTTCTGTCCATaGACCTTTATCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGAAFCP*TFIPSL
Trigger: CAAGGATGGGATAAAGGTCCATGGACAGAAAGCTGC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGATGGTTTCTCGATCTaGAGACTCAATGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIDGFSI*RLNVVG
Trigger: GCCAACTACATTGAGTCTCCAGATCGAGAAACCATC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTGTTGCCTGAAGGTTaGGGTCCAGGATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVLPEG*GPGWFL
Trigger: GAGAAACCATCCTGGACCCCAACCTTCAGGCAACAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGCAGCTCTCTACCTTaGCAACTGGTTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGSSLP*QLVPLS
Trigger: AGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCCAAAGATAGTGGCATaGCAGGTGTCATGCCAATTG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPPKIVA*QVSCQL
Trigger: CAATTGGCATGACACCTGCCATGCCACTATCTTTGG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTTTCTGGTTTTCCTCTaGTCCATGATAAAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSFLVFL*SMIKLG
Trigger: TCCGAGCTTTATCATGGACCAGAGGAAAACCAGAAA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAAGGTAGGATCTCTTTaGAAGGCAGGTATTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGKVGSL*KAGIGH
Trigger: GTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGACCTTCAAGGCAATaGGAAAGGAGCAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYRPSRQ*ERSKSA
Trigger: TGCAGATTTGCTCCTTTCCCATTGCCTTGAAGGTCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACATGGCAGAAGGCACTaGCTGGGCAGCACCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSHGRRH*LGSTRK
Trigger: TTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGCCATG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAGCCAAGAATCCCTTTaGGGTCGGAGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSQESL*GRRQLE
Trigger: TTCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTCATGGTGGTATCCATaGTTACCAGAGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSWWYP*LPESQE
Trigger: TTCTTGGCTCTCTGGTAACCATGGATACCACCATGA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTGTGGCTCTCCCCATTaGTTGACATTAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLCGSPH*LTLDIE
Trigger: TTCAATATCTAATGTCAACCAATGGGGAGAGCCACA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTGTAGGGTCTTCCCATaGACTTGTAGCAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYCRVFP*TCSRFV
Trigger: GACAAATCTGCTACAAGTCCATGGGAAGACCCTACA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACTGCGCTTGGTGATCTaGGTCACTTCAGCACTTATT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGLRLVI*VTSALI
Trigger: AATAAGTGCTGAAGTGACCCAGATCACCAAGCGCAG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTCAGGCTTTGGCCTTTaGGGAACAGTGTTCATAAGA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISGFGL*GTVFIR
Trigger: TCTTATGAACACTGTTCCCCAAAGGCCAAAGCCTGA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTCAGGCTTTGGCCTTTaGGGAACAGTGTTCATAAGA +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWSGFGL*GTVFIR
Trigger: TCTTATGAACACTGTTCCCCAAAGGCCAAAGCCTGA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATGCACCCATGCACCCTaGTGGCCCCATATATCCGTA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDACTHAP*WPHISV
Trigger: TACGGATATATGGGGCCACCAGGGTGCATGGGTGCA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGTGTCCCTGCAGCTTTaGCATTTTGATAGGTATCCT +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVVSLQL*HFDRYP
Trigger: AGGATACCTATCAAAATGCCAAAGCTGCAGGGACAC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCCTTCCTGGGATACTaGAGCCCTACACTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGAFLGY*SPTLLA
Trigger: AGCTAACAGTGTAGGGCTCCAGTATCCCAGGAAGGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCCTTCCTGGGATACTaGAGCCCTACACTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAFLGY*SPTLLA
Trigger: AGCTAACAGTGTAGGGCTCCAGTATCCCAGGAAGGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAGCTCCAGCACAGCCTaGCCAACAAGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYSSSTA*PTRQNS
Trigger: GGAGTTTTGCCTTGTTGGCCAGGCTGTGCTGGAGCT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAAAAAGGATCTTATTTaGCAGGGTGCTGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVKKDLI*QGAVAH
Trigger: GTGAGCCACAGCACCCTGCCAAATAAGATCCTTTTT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGACATACACATATCCTaGTTTGGGATTTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSDIHIS*FGILHP
Trigger: TGGGTGCAAAATCCCAAACCAGGATATGTGTATGTC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGAAGGCCTCTTCAGCTaGCTCTGGCATGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYEGLFS*LWHEFY
Trigger: ATAAAATTCATGCCAGAGCCAGCTGAAGAGGCCTTC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAGGAGACATGCCAGATaGACAGAGGGCCCAGATTGG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIRRHAR*TEGPDW
Trigger: CCAATCTGGGCCCTCTGTCCATCTGGCATGTCTCCT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCTTTCTCTGGGACTCTaGGTCCAGCATCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLSLGL*VQHLAE
Trigger: TTCAGCCAGATGCTGGACCCAGAGTCCCAGAGAAAG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGCTGGACACGCTGCGTaGGTTGGCATCATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRAGHAA*VGIIAV
Trigger: GACAGCGATGATGCCAACCCACGCAGCGTGTCCAGC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGAACTGCTTTTGTCCATaGCCAATGGCAAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQNCFCP*PMARLF
Trigger: AAACAACCTTGCCATTGGCCATGGACAAAAGCAGTT...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGATGAGCAAGAACAGATaGTCAGCTTCGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKMSKNR*SASASL
Trigger: CAGAGAGGCCGAAGCTGACCATCTGTTCTTGCTCAT...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp CCATCCTTGGACACACAGCCTCTTCCCACCACAGAATaGCATATGTTACAGCTGAGTTGGTTAGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PSLDTQPLPTTE*HMLQLSWLGIF
Trigger: GAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGAGGCTGTGTGTCCAAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 72 bp TTCATTGTAGGGTCTTCCCATGGACTTGTAGCAGATTaGTCTTCCCTGCCAGCCTCTACCTTCCCAATGGTT +
Preference number: 4 (lower is better)
Translates to: FIVGSSHGLVAD*SSLPASTFPMV
Trigger: AACCATTGGGAAGGTAGAGGCTGGCAGGGAAGACAAATCTGCTACAAGTCCATGGGAAGACCCTACAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCAGGGGCTTTCTCCTCTaGTTCACTAAACCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGRGFLL*FTKPAQ
Trigger: CTGAGCTGGTTTAGTGAATCAGAGGAGAAAGCCCCT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTCTCCACCCTTGGATaGATCATCACAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHFSTLG*IITALR
Trigger: CCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTTCTCCACCCTTGGATaGATCATCACAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWFSTLG*IITALR
Trigger: CCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAACTTCTGGATCTTGCTaGGAGTGGCTGAACCACCAG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDATSGSC*EWLNHQ
Trigger: CTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCAAGGAGATGTTGTCTaGGTCCAAGGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHQGDVV*VQGHCL
Trigger: AAGGCAGTGGCCTTGGACTCAGACAACATCTCCTTG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACTAGTGAGGGTGGTTTaGCAAAGCTCTTCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSLVRVV*QSSSLW
Trigger: CCACAGCGAAGAGCTTTGTCAAACCACCCTCACTAG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGCATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWALAES*DVKVAT
Trigger: AGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTTGGGTGTGGTTTCTaGGGCATTAAGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFGCGF*GIKGSL
Trigger: CAGGGAGCCCTTAATGCCTCAGAAACCACACCCAAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGACTTGATGGAGGGTaGAGCAGTCTCTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGLDGG*SSLCRT
Trigger: GGTTCTACAGAGACTGCTTCACCCTCCATCAAGTCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGACTTGATGGAGGGTaGAGCAGTCTCTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGLDGG*SSLCRT
Trigger: GGTTCTACAGAGACTGCTTCACCCTCCATCAAGTCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAGACTGATATGTTATTaGCACCTCGACGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCRLICY*HLDGKE
Trigger: CTCCTTGCCGTCGAGGTGTCAATAACATATCAGTCT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGTCATTTTTACAGGCTaGTTGGTGGTACCTATAATA +
Preference number: 4 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLVIFTG*LVVPII
Trigger: TATTATAGGTACCACCAATCAGCCTGTAAAAATGAC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAGGAAGGTGTGGAGATaGTACCACAGCTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYRKVWR*YHSLGT
Trigger: GGTACCCAAGCTGTGGTATCATCTCCACACCTTCCT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGGAAGGTGTGGAGATaGTACCACAGCTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDARKVWR*YHSLGT
Trigger: GGTACCCAAGCTGTGGTATCATCTCCACACCTTCCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATCTCAGGGTTGCTTGTaGGAATCATTTAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSQGCL*ESFRNC
Trigger: GCAGTTCCTAAATGATTCTCACAAGCAACCCTGAGA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWWQPSC*CPLCHP
Trigger: TGGATGACATAGGGGACATCAACAAGACGGCTGCCA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTGGCAGCCGTCTTGTTaGTGTCCCCTATGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIWQPSC*CPLCHP
Trigger: TGGATGACATAGGGGACATCAACAAGACGGCTGCCA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTTCTCCCTCTACTTCTaGGCCAATGCTTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCFSLYF*ANASCL
Trigger: GAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCACAAGGGGGCGTAGCTaGATGGAGGTTAACATTTCC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGTRGRS*MEVNIS
Trigger: GGAAATGTTAACCTCCATTCAGCTACGCCCCCTTGT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGTTGGGTGGAAGAGTaGTCCAGGTTGGTATGCCTA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGWVEE*SRLVCL
Trigger: TAGGCATACCAACCTGGATCACTCTTCCACCCAACC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGTTGGGTGGAAGAGTaGTCCAGGTTGGTATGCCTA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGWVEE*SRLVCL
Trigger: TAGGCATACCAACCTGGATCACTCTTCCACCCAACC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCCAGTGTTTCTTTTCTaGAGGATCCCAGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPPVFLF*RIPVVS
Trigger: TGAGACTACTGGGATCCTTCAGAAAAGAAACACTGG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAAGGTGCCTGGCGGTTaGGAATTTAGCTATGGGACC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHKVPGG*EFSYGT
Trigger: GGTCCCATAGCTAAATTCTCAACCGCCAGGCACCTT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTTGATTTGGAGGACTaGGTCCCCTTCAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLDLED*VPFSQA
Trigger: TGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGGAACACCATGCATTTaGGAAACACGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCGTPCI*ETRTLS
Trigger: TGACAGAGTCCGTGTTTCTCAAATGCATGGTGTTCC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACCGGCTCTCTCTTCATaGTTGTTACCGCAACTATAT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGPALSS*LLPQLY
Trigger: ATATAGTTGCGGTAACAATCATGAAGAGAGAGCCGG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGAGAGGTTGGTGAGTaGCTTCTGCTTGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWREVGE*LLLAQV
Trigger: AACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGAAAAGAGAGGTTGGTaGGTGACTTCTGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWEKRGW*VTSACA
Trigger: TGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCATGGTCTTGCCCATaGGGTCACTGTCGCTCATGT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASWSCP*GHCRSC
Trigger: ACATGAGCGACAGTGACCTCATGGGCAAGACCATGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGGGAAATAGTTTTAACTaGTTTCCTGTATCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LPKETAQKRQLGMKESDQGNSFN*FPVSRS
Trigger: GCTCCGAGATACAGGAAATCAGTTAAAACTATTTCC...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGCCCTCAGGTTTGCCTaGGACTTTGAGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRALRFA*DFEGTL
Trigger: CAGAGTGCCCTCAAAGTCGCAGGCAAACCTGAGGGC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGCTGAACCACCAGTTTaGATGACAGTGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAAEPPV*MTVAVP
Trigger: AGGCACAGCCACTGTCATGCAAACTGGTGGTTCAGC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTCGCATCAGCATCCTTaGTGCTGCCGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWSHQHP*CCRCWN
Trigger: ATTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCAGTCGGTCATTCTCTaGTTTCAGCAGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHQSVIL*FQQVHL
Trigger: GAGGTGGACCTGCTGAAAGCAGAGAATGACCGACTG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCTCACTGATGGAGCCTaGTTCACTCAGGTCATCCAA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGLTDGA*FTQVIQ
Trigger: TTGGATGACCTGAGTGAAGCAGGCTCCATCAGTGAG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATATCCTGAAGCTCAAGTaGAAGCCATGGTTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHILKLK*KPWLGV
Trigger: GACACCCAACCATGGCTTGCACTTGAGCTTCAGGAT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAWQVS*QLHGIR
Trigger: TCTGATGCCATGCAATTGGCATGACACCTGCCATGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCATGGCAGGTGTCATaGCAATTGCATGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGAWQVS*QLHGIR
Trigger: TCTGATGCCATGCAATTGGCATGACACCTGCCATGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGAAAGGAGCAAATCTaGAAAGGTAGGATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGKEQI*KGRISL
Trigger: CAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGGAGGCTCAGCCTTCTaGAGTTGCCATATAACTGTG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWGGSAF*SCHITV
Trigger: CACAGTTATATGGCAACTGCAGAAGGCTGAGCCTCC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAACAGCAACAGCAAACTaGTCTTGTGTGTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGTATAN*SCVCER
Trigger: TCTCTCACACACACAAGAGCAGTTTGCTGTTGCTGT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGCCTAGAGACTGGCTaGGATATGGTAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWSLETG*DMVALP
Trigger: AGGCAGAGCTACCATATCGCAGCCAGTCTCTAGGCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGTCTCTTCCAGGTTCTaGCGGAGATCCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIVSSRF*RRSRTF
Trigger: GAATGTCCTGGATCTCCGGCAGAACCTGGAAGAGAC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR GCA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCTCACCCTTTGCCCATTaGTGGGATTACAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLSPFAH*WDYSLS
Trigger: TGAAAGGCTGTAATCCCAGCAATGGGCAAAGGGTGA...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATCTGTATGCTCTTCTGTaGTGCCTTTCCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHLYALL*CLSPSR
Trigger: CCTGGATGGGGAAAGGCAGCACAGAAGAGCATACAG...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGTGCTTCACCCTTTCTTaGTTTGCAGCTGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKCFTLS*FAAAPC
Trigger: ACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGAAGCA...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCCTGCGAGAAGCAGTaGGAGTACTTGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSCEKQ*EYLGGS
Trigger: ACTCCCTCCCAAGTACTCCCACTGCTTCTCGCAGGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGTTACAGCCACAGGTaGGGTCTTGCCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASYSHR*GLALLQ
Trigger: CTGAAGAAGGGCAAGACCCCACCTGTGGCTGTAACT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGGCAGGCTGCGGTACTaGATGTTAGAACGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRGRLRY*MLERAP
Trigger: TGGAGCCCGTTCTAACATCCAGTACCGCAGCCTGCC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGGGACCTTTGAAGCATaGGTGGTATCACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCGTFEA*VVSLDD
Trigger: ATCATCCAGTGATACCACCCATGCTTCAAAGGTCCC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAACTGGGGAGGCTCATTaGCATCTGGAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKTGEAH*HLEGLH
Trigger: ATGGAGTCCCTCCAGATGCCAATGAGCCTCCCCAGT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACCAGTTGCCCAGCTCTaGGGCTTCCACTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRPVAQL*GFHSKS
Trigger: TGACTTGGAGTGGAAGCCCCAGAGCTGGGCAACTGG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAATGTCGCCTCTCCTTaGTCTCCTCCTGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDANVASP*SPPGTE
Trigger: TTCAGTCCCAGGAGGAGACCAAGGAGAGGCGACATT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACAGGCAGCCCACCAATaGTATGGGAATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKQAAHQ*YGNVAS
Trigger: AGAGGCGACATTCCCATACCATTGGTGGGCTGCCTG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAGGCAGCTCTGACTaGTCATCGGATTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWEGSSD*SSDSGS
Trigger: GCTGCCTGAATCCGATGACCAGTCAGAGCTGCCTTC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCACTATGTTGGTAAGTTaGCCCTTTGCACTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPTMLVS*PFALRD
Trigger: GTCTCTGAGTGCAAAGGGCCAACTTACCAACATAGT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGTGGCCACTTTTTCCTaGGATGATTCCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCVATFS*DDSSSL
Trigger: TAGGGAACTGGAATCATCCCAGGAAAAAGTGGCCAC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGCTGAGACGTCAAGGTaGCCACTTTTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHAETSR*PLFPGM
Trigger: CATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGC...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTCTTCAGAAAGTCTATaGTTTCTCGCAAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSSESL*FLANPA
Trigger: TGCTGGATTTGCGAGAAACCATAGACTTTCTGAAGA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTGCCGATGCTGGAATaGCTAGTGATGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLPMLE*LVMLLR
Trigger: CCTCAACAGCATCACTAGCCATTCCAGCATCGGCAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAACCATGCTGTAGTTTaGGGGATGAGGGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWNHAVV*GMRGLK
Trigger: CTTCAGCCCCCTCATCCCCCAAACTACAGCATGGTT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTCTGGTTGGCTAGGTTaGAAAGATACAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSGWLG*KDTVAD
Trigger: ATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCTCAAGTGCAAGCCATaGTTGGGTGTCATTTTTACA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGILKCKP*LGVIFT
Trigger: TGTAAAAATGACACCCAACCATGGCTTGCACTTGAG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTCAAGTGCAAGCCATaGTTGGGTGTCATTTTTACA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLKCKP*LGVIFT
Trigger: TGTAAAAATGACACCCAACCATGGCTTGCACTTGAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCAGGAAGCCATTGGCTaGCTCCACGTTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYQEAIG*LHVVGE
Trigger: TTCTCCAACAACGTGGAGCCAGCCAATGGCTTCCTG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGATGATACCACAGCTTaGGTACCCAGTCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKDDTTA*VPSRAP
Trigger: GGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTTTGATTGGTCTTGTTaGGCTGATGGCCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCFDWSC*ADGQGS
Trigger: ACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGTGTTGCCTGAAGGTTaGGGTCCAGGATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYVLPEG*GPGWFL
Trigger: GAGAAACCATCCTGGACCCCAACCTTCAGGCAACAC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAACCCAAGCATCTCGTaGACATGTGAGGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGNPSIS*TCEEME
Trigger: TTCCATTTCCTCACATGTCCACGAGATGCTTGGGTT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGTCATGCCAATTGCATaGCATCAGATTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVVMPIA*HQILQR
Trigger: TCTTTGGAGAATCTGATGCCATGCAATTGGCATGAC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTTTCTGGTTTTCCTCTaGTCCATGATAAAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWFLVFL*SMIKLG
Trigger: TCCGAGCTTTATCATGGACCAGAGGAAAACCAGAAA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGTTAACATTTCCTGCTaGACTGTAAACTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYVNISC*TVNLRA
Trigger: GGCCCTTAAGTTTACAGTCCAGCAGGAAATGTTAAC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGAACCCTGTCATCCATaGGAGCTTACCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHEPCHP*ELTTWM
Trigger: CATCCACGTGGTAAGCTCCCATGGATGACAGGGTTC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGCAGAAGGCACTGGCTaGGCAGCACCAGAAAATAGA +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIAEGTG*AAPENR
Trigger: TCTATTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGGGGTCGGAGGCAGTTaGAATGAAAGAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHGVGGS*NERRGS
Trigger: AGAACCCCTTCTTTCATTCCAACTGCCTCCGACCCC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGCCAAGAATCCCTTTaGGGTCGGAGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASQESL*GRRQLE
Trigger: TTCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGCCAAGAATCCCTTTaGGGTCGGAGGCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSQESL*GRRQLE
Trigger: TTCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTCATGGTGGTATCCATaGTTACCAGAGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPSWWYP*LPESQE
Trigger: TTCTTGGCTCTCTGGTAACCATGGATACCACCATGA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCCTCTCCTGGAGTTGTaGCTCTCCCCATTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWPLLEL*LSPLVD
Trigger: GTCAACCAATGGGGAGAGCCACAACTCCAGGAGAGG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTGATTCAGCAGATCTaGGATGGGATTGAGAATTTT +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLIQQI*DGIENF
Trigger: AAAATTCTCAATCCCATCCCAGATCTGCTGAATCAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGGAGAGGGATGTTGCTaGGAGAACACGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYGEGCC*ENTLSW
Trigger: CCATGACAACGTGTTCTCCCAGCAACATCCCTCTCC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGGAGAGGGATGTTGCTaGGAGAACACGTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIGEGCC*ENTLSW
Trigger: CCATGACAACGTGTTCTCCCAGCAACATCCCTCTCC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTTATTCTGTCACCTTaGCTGAGTACTTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: APEGKPRLQYYLTRREHTFILSP*LSTSVS
Trigger: GGATACAGAAGTACTCAGCCAAGGTGACAGAATAAA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGGGGGCCAGGTTTCTaGTCAGTTTGCAACCTGTAC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWRGPGF*SVCNLY
Trigger: GTACAGGTTGCAAACTGACCAGAAACCTGGCCCCCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CCA 90 bp GAAGGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTGTAGTTTTCCTCCCTTaGCTGAACTTGTCTAACGAT +
Preference number: 4 (lower is better)
Translates to: EGYQRALWIRGRLVRKGAVVFLP*LNLSND
Trigger: ATCGTTAGACAAGTTCAGCCAAGGGAGGAAAACTAC...AGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGTTTGTCCATGGCCAATaGCAAGGTTGTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKFVHGQ*QGCFCL
Trigger: GAGGCAGAAACAACCTTGCCATTGGCCATGGACAAA...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTGTTGTTTACAGCTTTaGGGGAAAATGGCTCTTATG +
Preference number: 4 (lower is better)
Translates to: RGESTTAWLEEVASFLPMCCLQL*GKMALM
Trigger: CATAAGAGCCATTTTCCCCCAAAGCTGTAAACAACA...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCACTCCTTGTAGTCCCTaGAAGACTACTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCTPCSP*KTTHER
Trigger: CCTCTCATGAGTAGTCTTCCAGGGACTACAAGGAGT...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGACCTCAGGTCTTCTCTaGTTTGCTTCTCTACATCCT +
Preference number: 4 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRTSGLL*FASLHP
Trigger: AGGATGTAGAGAAGCAAACCAGAGAAGACCTGAGGT...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGGGGCTTTCTCCTCTaGTTCACTAAACCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSRGFLL*FTKPAQ
Trigger: CTGAGCTGGTTTAGTGAATCAGAGGAGAAAGCCCCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTTGCTGAGAGTGGCTaGACCACCAGTTTGCATGAC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLAESG*TTSLHD
Trigger: GTCATGCAAACTGGTGGTTCAGCCACTCTCAGCAAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGTGTTCCGATCCCGCTaGTTACTGTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRVFRSR*LLSSCP
Trigger: TGGGCAACTGGACAGTAATCAGCGGGATCGGAACAC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTGGACCACAAGTACTaGTGCCATCCATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALDHKY*CHPWVT
Trigger: TGTCACCCATGGATGGCATCAGTACTTGTGGTCCAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGTCAACTTTTCCACTaGCCTTGCTACAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSSQLFH*PCYSPG
Trigger: TCCTGGGCTGTAGCAAGGTCAGTGGAAAAGTTGACT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTACCTTTGAGGGAGACTaGTATGTTATTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCTFEGD*YVIDTS
Trigger: CGAGGTGTCAATAACATATCAGTCTCCCTCAAAGGT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATCTCCTTCAGACCTTTaGGGGAGACTGATATGTTAT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSPSDL*GRLICY
Trigger: ATAACATATCAGTCTCCCTCAAAGGTCTGAAGGAGA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGTCATTTTTACAGGCTaGTTGGTGGTACCTATAATA +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPVIFTG*LVVPII
Trigger: TATTATAGGTACCACCAATCAGCCTGTAAAAATGAC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAATTGATGTCGCTGTCTaGCTCTACCAGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSIDVAV*LYQLPP
Trigger: AGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAAT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAGGAAGGTGTGGAGATaGTACCACAGCTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRKVWR*YHSLGT
Trigger: GGTACCCAAGCTGTGGTATCATCTCCACACCTTCCT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTGTTCCACAGGTCAATaGACCAGGTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWCSTGQ*TRSGSP
Trigger: AGGACTTCCGGACCTGGTTCATTGACCTGTGGAACA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGACAAGGGGGCGTAGCTaGATGGAGGTTAACATTTCC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWTRGRS*MEVNIS
Trigger: GGAAATGTTAACCTCCATTCAGCTACGCCCCCTTGT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGGCTCCATCTTAATTaGTCCCAGATCTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWRLHLN*SQIFCP
Trigger: GGGGCAGAAGATCTGGGATCAATTAAGATGGAGCCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGGCTCCATCTTAATTaGTCCCAGATCTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRLHLN*SQIFCP
Trigger: GGGGCAGAAGATCTGGGATCAATTAAGATGGAGCCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAACTGCTTTTCCTTGTTaGAGCCCCTTTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDATAFPC*SPFVCQ
Trigger: CTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTACTGCTTTTCCTTGTTaGAGCCCCTTTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGITAFPC*SPFVCQ
Trigger: CTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTGCAAGACTCTCCTATaGGCTGAGTGGAGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHCKTLL*AEWSVD
Trigger: ATCCACACTCCACTCAGCTCATAGGAGAGTCTTGCA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATTGCAAGACTCTCCTATaGGCTGAGTGGAGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYCKTLL*AEWSVD
Trigger: ATCCACACTCCACTCAGCTCATAGGAGAGTCTTGCA...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTCTGTCACCTTGGCTaGGTACTTCTGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHFCHLG*VLLYPG
Trigger: ACCTGGATACAGAAGTACTCAGCCAAGGTGACAGAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATATGGCATTGAACAGATaGATCTTGCTGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHMALNR*ILLGGD
Trigger: GTCTCCTCCCAGCAAGATTCATCTGTTCAATGCCAT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAAACGCAAATGGCATTaGACAGATGAATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGKRKWH*TDESCW
Trigger: CCAGCAAGATTCATCTGTTCAATGCCATTTGCGTTT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCGTTCTTCATAAAAGTTaGGGCTCAGAGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCVLHKS*GSEKGK
Trigger: CTTCCCCTTCTCTGAGCCTCAACTTTTATGAAGAAC...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCAGAAACTGGCATTCATaGGCAAGAACAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCRNWHS*ARTDGQ
Trigger: CTGACCATCTGTTCTTGCTCATGAATGCCAGTTTCT...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGACAGTTGCAGATCCTTaGAAGACTGCTGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWTVADP*KTAGAC
Trigger: ACATGCACCAGCAGTCTTGCAAGGATCTGCAACTGT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATTGGAAAGATACAGTTaGAGATCCTTGCAAGACTGC +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGLERYS*RSLQDC
Trigger: GCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTCTCACTGATGGAGCCTaGTTCACTCAGGTCATCCAA +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGILTDGA*FTQVIQ
Trigger: TTGGATGACCTGAGTGAAGCAGGCTCCATCAGTGAG...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGGGGTGACAGTGATTaGCGAACCCTTAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGGDSD*RTLKVL
Trigger: CAACACTTTAAGGGTTCGGCAATCACTGTCACCCCC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATACCCAGCAGAACGTGTaGTCTCAAAAGGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHTQQNV*SQKGSQ
Trigger: TTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGAAAGGAGCAAATCTaGAAAGGTAGGATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGKEQI*KGRISL
Trigger: CAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGAGGTTAACATTTCCTaGTGGACTGTAAACTTAAGG +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIEVNIS*WTVNLR
Trigger: CCTTAAGTTTACAGTCCAGCAGGAAATGTTAACCTC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAGCTTACCACGTGGATaGAGAAGCTTTTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISLPRG*RSFCEG
Trigger: CCCCTCACAAAAGCTTCTGCATCCACGTGGTAAGCT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGGAGCTCAGGTTTTCTaGTTCAGAGAAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHGAQVF*FREVWM
Trigger: CATCCAGACTTCTCTGAAGCAGAAAACCTGAGCTCC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGCACAAGGACTGAAGTaGCCAGGTCTGTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWAQGLK*PGLCLH
Trigger: ATGAAGACACAGACCTGGGCACTTCAGTCCTTGTGC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGCACAAGGACTGAAGTaGCCAGGTCTGTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAAQGLK*PGLCLH
Trigger: ATGAAGACACAGACCTGGGCACTTCAGTCCTTGTGC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTCTGTATCCAGGTCCTaGTGTGGGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSVSRS*CGEKRG
Trigger: TCCTCTCTTTTCCCCACAGCAGGACCTGGATACAGA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTGATAGTCAAAATAACTaGCTTGATCTTTCCGTACTT +
Preference number: 4 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRDSQNN*LDLSVL
Trigger: AAGTACGGAAAGATCAAGGCAGTTATTTTGACTATC...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGTGGTGGCTGACAGATTaGAGTGTAAATGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRWWLTD*SVNESD
Trigger: GTCTGATTCATTTACACTGCAATCTGTCAGCCACCA...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATAGGCTGGAAGGAAACTaGAGAGGCATTCCACCGTTT +
Preference number: 4 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHRLEGN*RGIPPF
Trigger: AAACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCT...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACATGCCTGAGGACTTCTaGATCTTGCTGAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHMPEDF*ILLRVA
Trigger: AGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCAT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATTGGTGGCTGTGGGGTaGCTTGCTTGGTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRLVAVG*LAWFLG
Trigger: TCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCATGGGTGGTATCACTaGATGATGGTAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWHGWYH*MMVDPD
Trigger: GTCTGGATCTACCATCATCCAGTGATACCACCCATG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGCAGGCCTGAGAGTTTaGGGTACATGCGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRAGLRV*GTCGSL
Trigger: AAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAGCCCACCAATGGTATaGGAATGTCGCCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWSPPMV*ECRLSL
Trigger: CAAGGAGAGGCGACATTCCCATACCATTGGTGGGCT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATTGCACTCAGAGACATaGGAAGTGCAGGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLHSET*EVQGEK
Trigger: CTTCTCCCCCTGCACTTCCCATGTCTCTGAGTGCAA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTGGCCACTTTTTCCTaGGATGATTCCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVATFS*DDSSSL
Trigger: TAGGGAACTGGAATCATCCCAGGAAAAAGTGGCCAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGTGGCCACTTTTTCCTaGGATGATTCCAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGVATFS*DDSSSL
Trigger: TAGGGAACTGGAATCATCCCAGGAAAAAGTGGCCAC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTCCTCCTCATTTGCATaGAACAGCCTAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWSSSFA*NSLVWG
Trigger: CCCCCACACTAGGCTGTTCCATGCAAATGAGGAGGA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAACTGCATGTTGTGCATaGTCTCCCGAAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSTACCA*SPEADP
Trigger: TGGATCAGCTTCGGGAGACCATGCACAACATGCAGT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCATGCTGTAGCCATGGATaGACTCAGTGCTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSCCSHG*TQCLVP
Trigger: TGGGACTAAGCACTGAGTCCATCCATGGCTACAGCA...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGTTTCCCGGTCTATCTaGTTGGCTAGGTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGVSRSI*LARLER
Trigger: TCTTTCCAACCTAGCCAACCAGATAGACCGGGAAAC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGATGATACCACAGCTTaGGTACCCAGTCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRDDTTA*VPSRAP
Trigger: GGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCCTTTATCCCATCCTTaGCTCCTTCCTGTAGATAGG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGPLSHP*LLPVDR
Trigger: CCTATCTACAGGAAGGAGCCAAGGATGGGATAAAGG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTGGTACAGCTTTGATTaGTCTTGTTGGGCTGATGGC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWWYSFD*SCWADG
Trigger: GCCATCAGCCCAACAAGACCAATCAAAGCTGTACCA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGAGACTCAATGTAGTTaGCAGCTTCTTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWETQCS*QLLEVS
Trigger: TGAAACTTCAAGAAGCTGCCAACTACATTGAGTCTC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCACATGCTTCTTTTTCTaGGCTCCAGCCAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGTCFFF*APARSL
Trigger: CAGAGATCTGGCTGGAGCCCAGAAAAAGAAGCATGT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCCAAAGATAGTGGCATaGCAGGTGTCATGCCAATTG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGPKIVA*QVSCQL
Trigger: CAATTGGCATGACACCTGCCATGCCACTATCTTTGG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGAAGTCAAGGGAACTaGGTTCCTCTTCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGSQGN*VPLLPL
Trigger: TAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCTCATGACAGAGGCTaGCAATTGAGCTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASHDRG*QLSYPA
Trigger: TGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGGGGCGTAGCTGAATaGAGGTTAACATTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGGVAE*RLTFPA
Trigger: AGCAGGAAATGTTAACCTCCATTCAGCTACGCCCCC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATACTCCTCGGTTGGGTaGAAGAGTGATCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKYSSVG*KSDPGW
Trigger: CCAACCTGGATCACTCTTCCACCCAACCGAGGAGTA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTTCAGCACCATCCTTaGACACACAGCCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFQHHP*THSLFP
Trigger: TGGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGCAGAAGGCACTGGCTaGGCAGCACCAGAAAATAGA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWAEGTG*AAPENR
Trigger: TCTATTTTCTGGTGCTGCCCAGCCAGTGCCTTCTGC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAAGCAATTGGAGACCTaGCCTAAATGCAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWKQLET*PKCSSQ
Trigger: CTGACTGCTGCATTTAGGCCAGGTCTCCAATTGCTT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACCTCTCCTGGAGTTGTaGCTCTCCCCATTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRPLLEL*LSPLVD
Trigger: GTCAACCAATGGGGAGAGCCACAACTCCAGGAGAGG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTTCTTGACCTTGATTTaGAGGACTGAGTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCFLTLI*RTESPS
Trigger: TGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCCCATCACAGGGGTTaGCTTATGAAGTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISHHRG*LMKSAS
Trigger: AGAAGCCGACTTCATAAGCCAACCCCTGTGATGGGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTATCATTTTATTACTATaGCCTTCTCAGTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPIILLL*PSQWSH
Trigger: ATGGCTCCACTGAGAAGGCCATAGTAATAAAATGAT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCAAAGCCTCTCAGTGTaGGAACTCCAATACTATAAA +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYQSLSV*ELQYYK
Trigger: TTTATAGTATTGGAGTTCCCACACTGAGAGGCTTTG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTTTATTCTGTCACCTTaGCTGAGTACTTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVFILSP*LSTSVS
Trigger: GGATACAGAAGTACTCAGCCAAGGTGACAGAATAAA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAACTTGGACAGCGTCTTaGACATCAGCGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKTWTAS*TSAELH
Trigger: GTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTTTTGTGCAAACACTTaGAAAGCTCCTGCAGATCCG +
Preference number: 4 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCFCANT*KAPADP
Trigger: CGGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAA...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATTCGACGGCACTCTCATaGCTCCTACTGGCTTACAAT +
Preference number: 4 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHSTALS*LLLAYN
Trigger: ATTGTAAGCCAGTAGGAGCCATGAGAGTGCCGTCGA...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp ATGGGAAAGGAGCAAATCTGCAAAGGTAGGATCTCTTaGGAAGGCAGGTATTGGCCACCAAGTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: MGKEQICKGRIS*EGRYWPPSQTP
Trigger: AGGAGTTTGACTTGGTGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 72 bp TTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTaGATAGGTATCCTCCCTTCAAGGCTACATCTTCTG +
Preference number: 4 (lower is better)
Translates to: FQPSSCPCSFGI*IGILPSRLHLL
Trigger: CAGAAGATGTAGCCTTGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp CTAACAAGTTCCCAAAGGCTGCTGATGCTGCTGGTCTaGTGCCATACTTTGCGAACCACTGCTTTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LTSSQRLLMLLV*CHTLRTTALRN
Trigger: ATTCCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGACCAGCAGCATCAGCAGCCTTTGGGAACTTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp TTCCTTTCACCCACTGTGCAGGCAACATCTGTCTTCTaGACCTCAGGTCTTCTCTGGTTTGCTTCTCTACAT +
Preference number: 4 (lower is better)
Translates to: FLSPTVQATSVF*TSGLLWFASLH
Trigger: ATGTAGAGAAGCAAACCAGAGAAGACCTGAGGTCAAGAAGACAGATGTTGCCTGCACAGTGGGTGAAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAACTTCTGGATCTTGCTaGGAGTGGCTGAACCACCAG +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRTSGSC*EWLNHQ
Trigger: CTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACCAGACTGTTGGAGTTaGCCTTGTCAAGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAPDCWS*PCQDWL
Trigger: TAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTGGGAGAAGCTGGCTaGGTTAATATTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLGEAG*VNIEDG
Trigger: CCCATCCTCAATATTAACTCAGCCAGCTTCTCCCAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGACTGATATGTTATTaGCACCTCGACGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDARLICY*HLDGKE
Trigger: CTCCTTGCCGTCGAGGTGTCAATAACATATCAGTCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTCATTTTTACAGGCTaGTTGGTGGTACCTATAATA +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVIFTG*LVVPII
Trigger: TATTATAGGTACCACCAATCAGCCTGTAAAAATGAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCTTCCTTGTTGGCATTaGTGTCGCTGTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHLPCWH*CRCLTL
Trigger: TAGAGTCAGACAGCGACATCAATGCCAACAAGGAAG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCATCTCGTGGACATGTaGGGAAATGGAAAAACGGAA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGHLVDM*GNGKTE
Trigger: TTCCGTTTTTCCATTTCCTCACATGTCCACGAGATG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTCTCCCTCTACTTCTaGGCCAATGCTTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFSLYF*ANASCL
Trigger: GAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTCTCCCTCTACTTCTaGGCCAATGCTTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHFSLYF*ANASCL
Trigger: GAGACATGAAGCATTGGCTCAGAAGTAGAGGGAGAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGGCTATACCTTCTCATaGCAGAGGCTGGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWGYTFS*QRLAIE
Trigger: CTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGCC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAATCAGAATAGTGCAGTaGAAGGCCAAACTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSIRIVQ*KAKLAT
Trigger: TGTGGCCAGTTTGGCCTTTCACTGCACTATTCTGAT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGATGGCATTAAAAGTCTaGGCCTTGCCATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWMALKV*ALPWNW
Trigger: CCAGTTCCATGGCAAGGCTCAGACTTTTAATGCCAT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACTAGTATACACAGGTTaGATTTTCAACCGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGLVYTG*IFNRLR
Trigger: ACGAAGACGGTTGAAAATTCAACCTGTGTATACTAG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATACTCACTTACTTCCATaGCCACCCTTGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHTHLLP*PPLSQK
Trigger: TTTCTGTGACAAGGGTGGTCATGGAAGTAAGTGAGT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCATTCTGTCACCTTGGCTaGGTACTTCTGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSFCHLG*VLLYPG
Trigger: ACCTGGATACAGAAGTACTCAGCCAAGGTGACAGAA...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCATGGTAGCTCTGCCTTaGTATCATCTTCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGMVALP*YHLRVF
Trigger: GAAGACACGAAGATGATATCAAGGCAGAGCTACCAT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTTAAAATGAATTACTaGGGGGACAGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHFKMNY*GDSPAL
Trigger: GAGAGCCGGGCTGTCCCCTCAGTAATTCATTTTAAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATCATGGTCTTGCCCATaGGGTCACTGTCGCTCATGT +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRSWSCP*GHCRSC
Trigger: ACATGAGCGACAGTGACCTCATGGGCAAGACCATGA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATTCTATCATAGAGCTGTaGAGAAGACGCATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHSIIEL*RRRMPL
Trigger: CAAGGGCATGCGTCTTCTTCACAGCTCTATGATAGA...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTTGCAAGACTGCTGGTaGATGTTGAAGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLQDCW*MLKVLT
Trigger: CGTCAGCACCTTCAACATGCACCAGCAGTCTTGCAA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGATCCTTGCAAGACTaGTGGTGCATGTTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSRSLQD*WCMLKV
Trigger: CACCTTCAACATGCACCAGCAGTCTTGCAAGGATCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAGATCCTTGCAAGACTaGTGGTGCATGTTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYRSLQD*WCMLKV
Trigger: CACCTTCAACATGCACCAGCAGTCTTGCAAGGATCT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAACAGTTGCAGATCCTTaGAAGACTGCTGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSTVADP*KTAGAC
Trigger: ACATGCACCAGCAGTCTTGCAAGGATCTGCAACTGT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTCACTGATGGAGCCTaGTTCACTCAGGTCATCCAA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLTDGA*FTQVIQ
Trigger: TTGGATGACCTGAGTGAAGCAGGCTCCATCAGTGAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTACCCAGCAGAACGTGTaGTCTCAAAAGGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGITQQNV*SQKGSQ
Trigger: TTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCACATATCCTTGACCTaGAGAGTCCTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHHISLT*RVLKLQ
Trigger: CTGAAGCTTCAGGACTCTGCAGGTCAAGGATATGTG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTTCTTAAGGTCTCATaGAGATATCTTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVLKVS*RYLLDL
Trigger: AAGGTCAAGAAGATATCTGCATGAGACCTTAAGAAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTCACATAAACGGTGCTaGCTAAAACAGTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGSHKRC*LKQYGG
Trigger: GCCTCCATACTGTTTTAGGCAGCACCGTTTATGTGA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTTGTTTCTGCCTCCATaGAGAACCACTGGTAATCAA +
Preference number: 4 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCLFLPP*RTTGNQ
Trigger: TTGATTACCAGTGGTTCTGCATGGAGGCAGAAACAA...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAACGGATTCTCCAGGTTTaGAAGGCTGGAAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQRILQV*KAGRKL
Trigger: CAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCG...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTCATGCGGGTCTCTTTTaGCACACTGAAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIHAGLF*HTETTH
Trigger: ATGAGTGGTTTCAGTGTGCCAAAAGAGACCCGCATG...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATCTTCAGAAAGTCTATaGTTTCTCGCAAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSSESL*FLANPA
Trigger: TGCTGGATTTGCGAGAAACCATAGACTTTCTGAAGA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATCCTCCTCATTTGCATaGAACAGCCTAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRSSSFA*NSLVWG
Trigger: CCCCCACACTAGGCTGTTCCATGCAAATGAGGAGGA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCCCGGTCTATCTGGTTaGCTAGGTTGGAAAGATACA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHPGLSG*LGWKDT
Trigger: TGTATCTTTCCAACCTAGCCAACCAGATAGACCGGG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTCCTTTATCCCATCCTTaGCTCCTTCCTGTAGATAGG +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIPLSHP*LLPVDR
Trigger: CCTATCTACAGGAAGGAGCCAAGGATGGGATAAAGG...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTTGATTGGTCTTGTTaGGCTGATGGCCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFDWSC*ADGQGS
Trigger: ACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCATGGTACAGCTTTGATTaGTCTTGTTGGGCTGATGGC +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSWYSFD*SCWADG
Trigger: GCCATCAGCCCAACAAGACCAATCAAAGCTGTACCA...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGAAGTTTCAGCAGCATaGCCATCAGAGGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAEVSAA*PSEDLS
Trigger: ACTCAGATCCTCTGATGGCCATGCTGCTGAAACTTC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGGTTGGGGTCCAGGATaGTTTCTCGATCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRGWGPG*FLDLET
Trigger: AGTCTCCAGATCGAGAAACCATCCTGGACCCCAACC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATACATGCTTCTTTTTCTaGGCTCCAGCCAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYTCFFF*APARSL
Trigger: CAGAGATCTGGCTGGAGCCCAGAAAAAGAAGCATGT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTCTACCTTGGCAACTaGTTCCTCTCTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLYLGN*FLSLQL
Trigger: AAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTCTACCTTGGCAACTaGTTCCTCTCTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLYLGN*FLSLQL
Trigger: AAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGGAAGTCAAGGGAACTaGGTTCCTCTTCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKGSQGN*VPLLPL
Trigger: TAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTCTCATGACAGAGGCTaGCAATTGAGCTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWSHDRG*QLSYPA
Trigger: TGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTCATGGTGGTATCCATaGTTACCAGAGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSWWYP*LPESQE
Trigger: TTCTTGGCTCTCTGGTAACCATGGATACCACCATGA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGAGAGTAGAGGGTGGTaGATCCCAGGAAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSESRGW*IPGREI
Trigger: TATTTCTCTTCCTGGGATCCACCACCCTCTACTCTC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGAGAGTAGAGGGTGGTaGATCCCAGGAAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWESRGW*IPGREI
Trigger: TATTTCTCTTCCTGGGATCCACCACCCTCTACTCTC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTGGAGGAAAGCAATTaGAGACCTGGCCTAAATGCA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLEESN*RPGLNA
Trigger: TGCATTTAGGCCAGGTCTCCAATTGCTTTCCTCCAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACTGGAGGAAAGCAATTaGAGACCTGGCCTAAATGCA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALEESN*RPGLNA
Trigger: TGCATTTAGGCCAGGTCTCCAATTGCTTTCCTCCAG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCCCATCACAGGGGTTaGCTTATGAAGTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSHHRG*LMKSAS
Trigger: AGAAGCCGACTTCATAAGCCAACCCCTGTGATGGGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTATGGCCTTCTCAGTaGAGCCATGAGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLWPSQ*SHEPEL
Trigger: AAGTTCTGGCTCATGGCTCCACTGAGAAGGCCATAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCAAAGCCTCTCAGTGTaGGAACTCCAATACTATAAA +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPQSLSV*ELQYYK
Trigger: TTTATAGTATTGGAGTTCCCACACTGAGAGGCTTTG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGACAGATGAATCTTGCTaGGAGGAGACATGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWTDESC*EETCQM
Trigger: CATCTGGCATGTCTCCTCCCAGCAAGATTCATCTGT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACACAGATGAATCTTGCTaGGAGGAGACATGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHTDESC*EETCQM
Trigger: CATCTGGCATGTCTCCTCCCAGCAAGATTCATCTGT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGTTCTCAGTAGTGTCGTaGTCACTAGACAGAATTCTA +
Preference number: 4 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRFSVVS*SLDRIL
Trigger: TAGAATTCTGTCTAGTGACCACGACACTACTGAGAA...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAAGCCTTGACAGCATGGTaGCTGACAGATTGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQALTAW*LTDCSV
Trigger: TACACTGCAATCTGTCAGCCACCATGCTGTCAAGGC...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp ATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATaGCATGGCATCAGATTCTCCAAAGAAAACCCACTT +
Preference number: 4 (lower is better)
Translates to: MPKIVAWQVSCQ*HGIRFSKENPL
Trigger: AAGTGGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 72 bp TACCGATATGAAGATTCAGATGCATCTACTCCTCGGTaGGGTGGAAGAGTGATCCAGGTTGGTATGCCTATA +
Preference number: 4 (lower is better)
Translates to: YRYEDSDASTPR*GGRVIQVGMPI
Trigger: TATAGGCATACCAACCTGGATCACTCTTCCACCCAACCGAGGAGTAGATGCATCTGAATCTTCATATCGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 72 bp GCAGAAGCTTTTGTGAGGGGCAGCCCGGACCATCTTTaGGACTTAATATACCGATATGAAGATTCAGATGCA +
Preference number: 4 (lower is better)
Translates to: AEAFVRGSPDHL*DLIYRYEDSDA
Trigger: TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCCCCTCACAAAAGCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
3UTR CAA 72 bp GAGTTCTTAAGGTCTCATGCAGATATCTTCTTGACCTaGATTTGGAGGACTGAGTCCCCTTCAGTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: EFLRSHADIFLT*IWRTESPSVRQ
Trigger: TTGCCTGACTGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATGAGACCTTAAGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp CATCAGAATCACCAGGAGGGCTTATTAAAACGTGGATaGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: HQNHQEGLLKRG*PGPLIRVSDSA
Trigger: TGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACGTTTTAATAAGCCCTCCTGGTGATTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp AGCAATCTGGAAGAGACCTCCAACTGCTTTTCCTTGTaGAAGCCCCTTTGTGTGCCAGGTAGTAATTTCCAA +
Preference number: 4 (lower is better)
Translates to: SNLEETSNCFSL*KPLCVPGSNFQ
Trigger: TTGGAAATTACTACCTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTCCAGATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp AAGAGCAATCTGGAAGAGACCTCCAACTGCTTTTCCTaGTTGAAGCCCCTTTGTGTGCCAGGTAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: KSNLEETSNCFS*LKPLCVPGSNF
Trigger: GAAATTACTACCTGGCACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGAGGTCTCTTCCAGATTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp ATCCATAACTGCTTTTGTCCATGGCCAATGGCAAGGTaGTTTCTGCCTCCATGCAGAACCACTGGTAATCAA +
Preference number: 4 (lower is better)
Translates to: IHNCFCPWPMAR*FLPPCRTTGNQ
Trigger: TTGATTACCAGTGGTTCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCATGGACAAAAGCAGTTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp TGGTGGGTGTGGCACAAGGGAGAGAAAAGATGGTTCTaGTTTATGTTACAATTCTTATGGGTCCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WWVWHKGEKRWF*FMLQFLWVPQE
Trigger: CTCTTGGGGGACCCATAAGAATTGTAACATAAACAAGAACCATCTTTTCTCTCCCTTGTGCCACACCCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp TTGAGGCTTGAGATGCTATCTGAGGAGTTTTGTCTCTaGATCCGAAGTTCTTTGGGTGTGGTTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRLEMLSEEFCL*IRSSLGVVSEA
Trigger: TGCCTCAGAAACCACACCCAAAGAACTTCGGATCAAGAGACAAAACTCCTCAGATAGCATCTCAAGCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCCAGACTGTTGGAGTTaGCCTTGTCAAGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWPDCWS*PCQDWL
Trigger: TAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACCAGACTGTTGGAGTTaGCCTTGTCAAGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKPDCWS*PCQDWL
Trigger: TAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCTCTTTTGGCACACTaGAACCACTCATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISLLAH*NHSLAP
Trigger: TGGAGCTAATGAGTGGTTTCAGTGTGCCAAAAGAGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCTCTTTTGGCACACTaGAACCACTCATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASLLAH*NHSLAP
Trigger: TGGAGCTAATGAGTGGTTTCAGTGTGCCAAAAGAGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGACCTTTGAGGGAGACTaGTATGTTATTGACACCTCG +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWTFEGD*YVIDTS
Trigger: CGAGGTGTCAATAACATATCAGTCTCCCTCAAAGGT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAAGAAGGTCAACATCCTaGAGCTCAAGTGCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKRRSTS*SSSASH
Trigger: ATGGCTTGCACTTGAGCTTCAGGATGTTGACCTTCT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTTCCTTGTTGGCATTaGTGTCGCTGTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLPCWH*CRCLTL
Trigger: TAGAGTCAGACAGCGACATCAATGCCAACAAGGAAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACATCTCGTGGACATGTaGGGAAATGGAAAAACGGAA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSHLVDM*GNGKTE
Trigger: TTCCGTTTTTCCATTTCCTCACATGTCCACGAGATG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAGACTTGCCCATTCCTaGCAAGCAAGATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYRLAHS*QARFHS
Trigger: ACTATGGAATCTTGCTTGTCAGGAATGGGCAAGTCT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACACCAGAAAATAGAGTaGAGCGCTCAACCATCAGAT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSHQKIE*SAQPSD
Trigger: ATCTGATGGTTGAGCGCTTCACTCTATTTTCTGGTG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCACCAGAAAATAGAGTaGAGCGCTCAACCATCAGAT +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYHQKIE*SAQPSD
Trigger: ATCTGATGGTTGAGCGCTTCACTCTATTTTCTGGTG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACACCAGAAAATAGAGTaGAGCGCTCAACCATCAGAT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAHQKIE*SAQPSD
Trigger: ATCTGATGGTTGAGCGCTTCACTCTATTTTCTGGTG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCCGGCTCTCTCTTCATaGTTGTTACCGCAACTATAT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHPALSS*LLPQLY
Trigger: ATATAGTTGCGGTAACAATCATGAAGAGAGAGCCGG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACGAAGCTTCCGGATTTaGTCAGATTGCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRRSFRI*SDCILS
Trigger: GGAGAGGATGCAATCTGAGCAAATCCGGAAGCTTCG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGATATTCACCAGGCTCTaGTCAAAAGCAGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWIFTRL*SKAATR
Trigger: TCTGGTGGCTGCTTTTGAGCAGAGCCTGGTGAATAT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGGGCTCCCTGAATGACTaGCTGGGCCTCAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FKQTGTTYELRVWEKRIEGSLND*LGLRVL
Trigger: AAGAACTCTGAGGCCCAGGCAGTCATTCAGGGAGCC...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGGAAGAATTCCTGCTaGTTCAAGTCCCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDARKNSC*FKSPLM
Trigger: CATCAAAGGGGACTTGAAGCAGCAGGAATTCTTCCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGACAGTTGCAGATCCTTaGAAGACTGCTGGTGCATGT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWTVADP*KTAGAC
Trigger: ACATGCACCAGCAGTCTTGCAAGGATCTGCAACTGT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGAATCATTTAGGAACTaGTGCAGTGTTTTGATGTTT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYESFRN*CSVLMF
Trigger: AAACATCAAAACACTGCAGCAGTTCCTAAATGATTC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGGTGTCATGCCAATTaGATGGCATCAGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSRCHAN*MASDSP
Trigger: TGGAGAATCTGATGCCATGCAATTGGCATGACACCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAAACACTTAGGCCGGTaGTCATCACATATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAKHLGR*SSHILD
Trigger: GTCAAGGATATGTGATGAGCACCGGCCTAAGTGTTT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGGAGCTCAGGTTTTCTaGTTCAGAGAAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKGAQVF*FREVWM
Trigger: CATCCAGACTTCTCTGAAGCAGAAAACCTGAGCTCC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCAAATTTTACCTAAATaGAGGGTTTCTATGTGGATG +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYQILPK*RVSMWM
Trigger: CATCCACATAGAAACCCTGCATTTAGGTAAAATTTG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCAGTTCTCCACCCTTaGATGAATCATCACAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASVLHP*MNHHSS
Trigger: AGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACACTATGTTGGTAAGTTaGCCCTTTGCACTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHTMLVS*PFALRD
Trigger: GTCTCTGAGTGCAAAGGGCCAACTTACCAACATAGT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTCCCAGGGTAGAGGCTaGGTCCATTTTAGAAATATA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWSQGRG*VHFRNI
Trigger: TATATTTCTAAAATGGACCCAGCCTCTACCCTGGGA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTCTGGTTGGCTAGGTTaGAAAGATACAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWSGWLG*KDTVAD
Trigger: ATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGTTTCCCGGTCTATCTaGTTGGCTAGGTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWVSRSI*LARLER
Trigger: TCTTTCCAACCTAGCCAACCAGATAGACCGGGAAAC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGCAGCTTTCTGTCCATaGACCTTTATCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKAAFCP*TFIPSL
Trigger: CAAGGATGGGATAAAGGTCCATGGACAGAAAGCTGC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAGTTTCAGCAGCATaGCCATCAGAGGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWEVSAA*PSEDLS
Trigger: ACTCAGATCCTCTGATGGCCATGCTGCTGAAACTTC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGATGGTTTCTCGATCTaGAGACTCAATGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWDGFSI*RLNVVG
Trigger: GCCAACTACATTGAGTCTCCAGATCGAGAAACCATC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTGGGATGATCTCACATaGATGTTCATCTCTTATATG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPWDDLT*MFISYM
Trigger: CATATAAGAGATGAACATCCATGTGAGATCATCCCA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATGGGATGATCTCACATaGATGTTCATCTCTTATATG +
Preference number: 4 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGWDDLT*MFISYM
Trigger: CATATAAGAGATGAACATCCATGTGAGATCATCCCA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGTTAACATTTCCTGCTaGACTGTAAACTTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHVNISC*TVNLRA
Trigger: GGCCCTTAAGTTTACAGTCCAGCAGGAAATGTTAAC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGMLQLS*LGIFTA
Trigger: AGCTGTGAAGATCCCTAACCAACTCAGCTGTAACAT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTGGAGGAAAGCAATTaGAGACCTGGCCTAAATGCA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLEESN*RPGLNA
Trigger: TGCATTTAGGCCAGGTCTCCAATTGCTTTCCTCCAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTGGACAAAACTTGTTaGTCTTCTTCATCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: TCALKREVKGTGFLFSLYLDKTC*SSSSRN
Trigger: ATTTCTGGATGAAGAAGACCAACAAGTTTTGTCCAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATGTAGGGTCTTCCCATaGACTTGTAGCAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDACRVFP*TCSRFV
Trigger: GACAAATCTGCTACAAGTCCATGGGAAGACCCTACA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTCTTGACCTTGATTTaGAGGACTGAGTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFLTLI*RTESPS
Trigger: TGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGAACCTTCTTATTTTaGGCCCCAAAGCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRTFLF*APKPLS
Trigger: ACTGAGAGGCTTTGGGGCCCAAAATAAGAAGGTTCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAAAAAGGATCTTATTTaGCAGGGTGCTGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAKKDLI*QGAVAH
Trigger: GTGAGCCACAGCACCCTGCCAAATAAGATCCTTTTT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGTCAGGCATAGAGAAATaGCAGAGGAGCAGTAAGACC +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWSGIEK*QRSSKT
Trigger: GGTCTTACTGCTCCTCTGCCATTTCTCTATGCCTGA...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATAAAAGCATTAGAAAGTaGGAGCCACTGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYKSIRK*EPLHSS
Trigger: ACTGCTGTGCAGTGGCTCCCACTTTCTAATGCTTTT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGGAGTCAGACCAGAATaGGAGTTAGGTTTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHGVRPE*ELGFSV
Trigger: TACTGAGAAACCTAACTCCCATTCTGGTCTGACTCC...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp CATGCACCCTGGTGGCCCCATATATCCGTAGTCAGGTaGATTCAGGACTTATTAAAATATAAGGCTGATTGG +
Preference number: 4 (lower is better)
Translates to: HAPWWPHISVVR*IQDLLKYKADW
Trigger: CCAATCAGCCTTATATTTTAATAAGTCCTGAATCAACCTGACTACGGATATATGGGGCCACCAGGGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp GGCGCAGGAGACCTGTTACTAGCACTGTATGTTTCTTaGTGCTTTACCCAAGTTCTCATACAGGGAAAATTG +
Preference number: 4 (lower is better)
Translates to: GAGDLLLALYVS*CFTQVLIQGKL
Trigger: CAATTTTCCCTGTATGAGAACTTGGGTAAAGCACAAAGAAACATACAGTGCTAGTAACAGGTCTCCTGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp GGAAATCAAAGAAATTTTCTGGTGGGAACCAGCTTCTaGAATAATGAAGCCAGGTTGAGGGTAGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GNQRNFLVGTSF*NNEARLRVGQV
Trigger: AACCTGCCCTACCCTCAACCTGGCTTCATTATTCAAGAAGCTGGTTCCCACCAGAAAATTTCTTTGATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCTCCTTCAGACCTTTaGGGGAGACTGATATGTTAT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISPSDL*GRLICY
Trigger: ATAACATATCAGTCTCCCTCAAAGGTCTGAAGGAGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACTTCCTTGTTGGCATTaGTGTCGCTGTCTGACTCTA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRLPCWH*CRCLTL
Trigger: TAGAGTCAGACAGCGACATCAATGCCAACAAGGAAG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCTCAGGGTTGCTTGTaGGAATCATTTAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSQGCL*ESFRNC
Trigger: GCAGTTCCTAAATGATTCTCACAAGCAACCCTGAGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCCAGTGTTTCTTTTCTaGAGGATCCCAGTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWPVFLF*RIPVVS
Trigger: TGAGACTACTGGGATCCTTCAGAAAAGAAACACTGG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR TCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAACTCACTTACTTCCATaGCCACCCTTGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKTHLLP*PPLSQK
Trigger: TTTCTGTGACAAGGGTGGTCATGGAAGTAAGTGAGT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGCTGAGCTTGTAGCATaGAGATCTGGGACCTTTGAA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRAELVA*RSGTFE
Trigger: TTCAAAGGTCCCAGATCTGCATGCTACAAGCTCAGC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAAGGAAGAATTCCTGCTaGTTCAAGTCCCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKRKNSC*FKSPLM
Trigger: CATCAAAGGGGACTTGAAGCAGCAGGAATTCTTCCT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAAGATCCTTGCAAGACTaGTGGTGCATGTTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRRSLQD*WCMLKV
Trigger: CACCTTCAACATGCACCAGCAGTCTTGCAAGGATCT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTTGGAAAGATACAGTTaGAGATCCTTGCAAGACTGC +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLERYS*RSLQDC
Trigger: GCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTCATTTAGGAACTGCTaGAGTGTTTTGATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPSFRNC*SVLMFS
Trigger: AGAAAACATCAAAACACTGCAGCAGTTCCTAAATGA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCTACTTCTGAGCCAATaGTTCATGTCTCATATAAGC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLLLSQ*FMSHIS
Trigger: GCTTATATGAGACATGAAGCATTGGCTCAGAAGTAG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGAAAGGAGCAAATCTaGAAAGGTAGGATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGKEQI*KGRISL
Trigger: CAAAGAGATCCTACCTTTGCAGATTTGCTCCTTTCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCAAATTTTACCTAAATaGAGGGTTTCTATGTGGATG +
Preference number: 4 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPQILPK*RVSMWM
Trigger: CATCCACATAGAAACCCTGCATTTAGGTAAAATTTG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCAGTTGAATTTAGTGTaGATCAGAATCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYQLNLV*IRITRR
Trigger: CCTCCTGGTGATTCTGATGCACACTAAATTCAACTG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGGTTAGAGCCTCCTCTTaGACTTTTACTATAAATCTG +
Preference number: 4 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKVRASS*TFTINL
Trigger: CAGATTTATAGTAAAAGTGCAAGAGGAGGCTCTAAC...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACTTGGGAGTACTTTCTaGGGAGCCAATACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLGSTF*GANTLQ
Trigger: TTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACATGGGTGGTATCACTaGATGATGGTAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRHGWYH*MMVDPD
Trigger: GTCTGGATCTACCATCATCCAGTGATACCACCCATG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGGGACCTTTGAAGCATaGGTGGTATCACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRGTFEA*VVSLDD
Trigger: ATCATCCAGTGATACCACCCATGCTTCAAAGGTCCC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTCTTCAGAAAGTCTATaGTTTCTCGCAAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWSSESL*FLANPA
Trigger: TGCTGGATTTGCGAGAAACCATAGACTTTCTGAAGA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTCCCAGGGTAGAGGCTaGGTCCATTTTAGAAATATA +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSQGRG*VHFRNI
Trigger: TATATTTCTAAAATGGACCCAGCCTCTACCCTGGGA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGAGACTCAATGTAGTTaGCAGCTTCTTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGETQCS*QLLEVS
Trigger: TGAAACTTCAAGAAGCTGCCAACTACATTGAGTCTC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGATGGTTTCTCGATCTaGAGACTCAATGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKDGFSI*RLNVVG
Trigger: GCCAACTACATTGAGTCTCCAGATCGAGAAACCATC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAAACCCAAGCATCTCGTaGACATGTGAGGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKNPSIS*TCEEME
Trigger: TTCCATTTCCTCACATGTCCACGAGATGCTTGGGTT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCAAAGAAAACCCACTTaGAAAAGCCAAACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWQRKPT*KSQTSP
Trigger: GGGGCTAGTTTGGCTTTTCCAAGTGGGTTTTCTTTG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGTCATGCCAATTGCATaGCATCAGATTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYVMPIA*HQILQR
Trigger: TCTTTGGAGAATCTGATGCCATGCAATTGGCATGAC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGTCTTATATTCTGATTaGGATGATCTCACATGGATG +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCVLYSD*DDLTWM
Trigger: CATCCATGTGAGATCATCCCAATCAGAATATAAGAC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAMLQLS*LGIFTA
Trigger: AGCTGTGAAGATCCCTAACCAACTCAGCTGTAACAT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAATTCCAGTATTAGGCTaGATTCTTCTGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSIPVLG*ILLKVP
Trigger: AGGCACCTTCAGAAGAATCCAGCCTAATACTGGAAT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAATATCTTCAGGCTTTaGCCTTTGGGGAACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGINIFRL*PLGNSV
Trigger: AACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGACACATATCCTGGTTTaGGATTTTGCACCCAATAAC +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWTHILV*DFAPNN
Trigger: GTTATTGGGTGCAAAATCCCAAACCAGGATATGTGT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATACACATATCCTGGTTTaGGATTTTGCACCCAATAAC +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHTHILV*DFAPNN
Trigger: GTTATTGGGTGCAAAATCCCAAACCAGGATATGTGT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp TTAAGATGCAGAACCCACCGTGTCTGGGTGTTTAGTTaGTTCTCTCTTAGCCAAATGGAACTTCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: LRCRTHRVWVFS*FSLSQMELPVL
Trigger: TAGAACAGGAAGTTCCATTTGGCTAAGAGAGAACAAACTAAACACCCAGACACGGTGGGTTCTGCATCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATATGAGCCAGAACTTGTaGGTAGTATATCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYMSQNL*VVYPSL
Trigger: TAGAGATGGATATACTACTCACAAGTTCTGGCTCAT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGATGAGCCAGAACTTGTaGGTAGTATATCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWMSQNL*VVYPSL
Trigger: TAGAGATGGATATACTACTCACAAGTTCTGGCTCAT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGAATCATGAAGAAGAATaGCCAAACCATCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWNHEEE*PNHQTG
Trigger: TCCAGTTTGATGGTTTGGTCATTCTTCTTCATGATT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAATCATGAAGAAGAATaGCCAAACCATCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHNHEEE*PNHQTG
Trigger: TCCAGTTTGATGGTTTGGTCATTCTTCTTCATGATT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR TCA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCATAAGGTTTTTCTCTaGAGGTTGTATTCAACTAGG +
Preference number: 4 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWHKVFL*RLYSTR
Trigger: CCTAGTTGAATACAACCTTCAGAGAAAAACCTTATG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTCATTTAGGAACTGCTaGAGTGTTTTGATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSFRNC*SVLMFS
Trigger: AGAAAACATCAAAACACTGCAGCAGTTCCTAAATGA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGAGGTTAACATTTCCTaGTGGACTGTAAACTTAAGG +
Preference number: 4 (lower is better)
Translates to: THTQTSGPTLASNDLVFYEVNIS*WTVNLR
Trigger: CCTTAAGTTTACAGTCCAGCAGGAAATGTTAACCTC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGAGGTTAACATTTCCTaGTGGACTGTAAACTTAAGG +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAEVNIS*WTVNLR
Trigger: CCTTAAGTTTACAGTCCAGCAGGAAATGTTAACCTC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCAAAACCAGAAACTACTaGGGAAATTGCAGACATGGT +
Preference number: 4 (lower is better)
Translates to: WELGFSVVSWSLDRILMTKTRNY*GNCRHG
Trigger: ACCATGTCTGCAATTTCCGCAGTAGTTTCTGGTTTT...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCTGGTTGGCTAGGTTaGAAAGATACAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSGWLG*KDTVAD
Trigger: ATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGTCTTATATTCTGATTaGGATGATCTCACATGGATG +
Preference number: 4 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGVLYSD*DDLTWM
Trigger: CATCCATGTGAGATCATCCCAATCAGAATATAAGAC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGTCTTATATTCTGATTaGGATGATCTCACATGGATG +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHVLYSD*DDLTWM
Trigger: CATCCATGTGAGATCATCCCAATCAGAATATAAGAC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGATGTTACAGCTGAGTTaGTTAGGGATCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWMLQLS*LGIFTA
Trigger: AGCTGTGAAGATCCCTAACCAACTCAGCTGTAACAT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTGTGGCTCTCCCCATTaGTTGACATTAGATATTGAA +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWCGSPH*LTLDIE
Trigger: TTCAATATCTAATGTCAACCAATGGGGAGAGCCACA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTGATTCAGCAGATCTaGGATGGGATTGAGAATTTT +
Preference number: 4 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLIQQI*DGIENF
Trigger: AAAATTCTCAATCCCATCCCAGATCTGCTGAATCAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGACATACACATATCCTaGTTTGGGATTTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKDIHIS*FGILHP
Trigger: TGGGTGCAAAATCCCAAACCAGGATATGTGTATGTC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
3UTR CAA 72 bp AATAAAGAGTTCTTAAGGTCTCATGCAGATATCTTCTaGACCTTGATTTGGAGGACTGAGTCCCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: NKEFLRSHADIF*TLIWRTESPSV
Trigger: GACTGAAGGGGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATGAGACCTTAAGAACTCTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGAATCATTTAGGAACTaGTGCAGTGTTTTGATGTTT +
Preference number: 4 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHESFRN*CSVLMF
Trigger: AAACATCAAAACACTGCAGCAGTTCCTAAATGATTC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTGTTCTTAAGGTCTCATaGAGATATCTTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIVLKVS*RYLLDL
Trigger: AAGGTCAAGAAGATATCTGCATGAGACCTTAAGAAC...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGAATCTGCCTTTAAGATaGAGAACCCACCGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FKQTGTTYELRVWEKRIENLPLR*RTHRVW
Trigger: CCAGACACGGTGGGTTCTGCATCTTAAAGGCAGATT...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR GCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGTTCTTGCTTTGCAGCTaGTCCTTGTTCCCGGATTCT +
Preference number: 4 (lower is better)
Translates to: FKQTGTTYELRVWEKRIEFLLCS*SLFPDS
Trigger: AGAATCCGGGAACAAGGAGCAGCTGCAAAGCAAGAA...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAATTCCAGTATTAGGCTaGATTCTTCTGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRIPVLG*ILLKVP
Trigger: AGGCACCTTCAGAAGAATCCAGCCTAATACTGGAAT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAATCATTTTATTACTATaGCCTTCTCAGTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAIILLL*PSQWSH
Trigger: ATGGCTCCACTGAGAAGGCCATAGTAATAAAATGAT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAAAACATGACAAAAGTTTaGTTTGGAGTCACGGAATCC +
Preference number: 4 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQNMTKV*FGVTES
Trigger: GGATTCCGTGACTCCAAACCAAACTTTTGTCATGTT...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR TCA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCATAAGGTTTTTCTCTaGAGGTTGTATTCAACTAGG +
Preference number: 4 (lower is better)
Translates to: SKYLSNERTGIARPSRQWHKVFL*RLYSTR
Trigger: CCTAGTTGAATACAACCTTCAGAGAAAAACCTTATG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR GCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGAATCATTTAGGAACTaGTGCAGTGTTTTGATGTTT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHESFRN*CSVLMF
Trigger: AAACATCAAAACACTGCAGCAGTTCCTAAATGATTC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGAGACTCAATGTAGTTaGCAGCTTCTTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRETQCS*QLLEVS
Trigger: TGAAACTTCAAGAAGCTGCCAACTACATTGAGTCTC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTTGGACAAAACTTGTTaGTCTTCTTCATCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGILDKTC*SSSSRN
Trigger: ATTTCTGGATGAAGAAGACCAACAAGTTTTGTCCAA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CCA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTGGACAAAACTTGTTaGTCTTCTTCATCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHLDKTC*SSSSRN
Trigger: ATTTCTGGATGAAGAAGACCAACAAGTTTTGTCCAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGCTGGCAGAAACTATTTaGTGCGTTTCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FKQTGTTYELRVWEKRIELAETI*CVSSSS
Trigger: AGAGGAGGAAGAAACGCACCAAATAGTTTCTGCCAG...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCTCGTTCCTATTATTTTaGTTTAACTCCTGCATTGTG +
Preference number: 4 (lower is better)
Translates to: WELGFSVVSWSLDRILMTSFLLF*FNSCIV
Trigger: CACAATGCAGGAGTTAAACCAAAATAATAGGAACGA...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CCA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGACCAGCCTGGCCACCTaGTCTCCATTAAAAATACAA +
Preference number: 4 (lower is better)
Translates to: FKQTGTTYELRVWEKRIETSLAT*SPLKIQ
Trigger: TTGTATTTTTAATGGAGACCAGGTGGCCAGGCTGGT...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
3UTR CAA 72 bp TCATTTGTGAAAAATAGTAAGAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCATCAGAATAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SFVKNSKSQLGY*DSVRHHQNSAV
Trigger: CACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCTCTTACTATTTTTCACAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR GCA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCATTTAGGAACTGCTaGAGTGTTTTGATGTTTTCT +
Preference number: 4 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSFRNC*SVLMFS
Trigger: AGAAAACATCAAAACACTGCAGCAGTTCCTAAATGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 90 bp AGGCGGGCGGCCCGCCGGGGACACGGCTGTCCACGCTGCCGGACTTaGAGACCTTCAGCTCAGCCGCGCTGGCCTTGGCCATGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RRAARRGHGCPRCRT*RPSAQPRWPWPCRR
Trigger: GCGGCGGCATGGCCAAGGCCAGCGCGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGACAGCCGTGTCCCCGGCGGGCCGCCCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp GCCACCGAAGCCTCCTCCGTTCCGGTGGCCTCGGAAGCCTGGAGGTaGCGACGGGGCTGGGGGCTCGACCTCCACCTGGGCTGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: ATEASSVPVASEAWR*RRGWGLDLHLGCSE
Trigger: TTCGGAGCAGCCCAGGTGGAGGTCGAGCCCCCAGCCCCGTCGGCACCTCCAGGCTTCCGAGGCCACCGGAACGGAGGAGGCTTCGGTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CCA 90 bp GGGGGAGGCTGCTCTCTGTGGGCTCAGGGCCAGGCCGGCCTGGCGTaGCCGCAGCTGGGGAGAAGCGCCCGGTGTAGGAATCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: GGGCSLWAQGQAGLA*PQLGRSARCRNPGL
Trigger: CAGACCAGGATTCCTACACCGGGCGCTTCTCCCCAGCTGCGGCCACGCCAGGCCGGCCTGGCCCTGAGCCCACAGAGAGCAGCCTCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367302.5
ENST00000593583.1
CDS CCA 90 bp ATGGAAGCCCCGCGGCTCCTCCGGCGCCCAGCGGTGCTTTTGCTTTaGTGTCCGGATCCCAGCCCGCGGCCTGCCTGCCTGTCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: MEAPRLLRRPAVLLL*CPDPSPRPACLSVP
Trigger: CGGGACTGACAGGCAGGCAGGCCGCGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGAGGAGCCGCGGGGCTTCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS CCA 90 bp CAAAGAGCCACCGAAGCCTCCTCCGTTCCGGTGGCCTCGGAAGCCTaGAGGTGCCGACGGGGCTGGGGGCTCGACCTCCACCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QRATEASSVPVASEA*RCRRGWGLDLHLGC
Trigger: GCAGCCCAGGTGGAGGTCGAGCCCCCAGCCCCGTCGGCACCTCCAGGCTTCCGAGGCCACCGGAACGGAGGAGGCTTCGGTGGCTCTTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS GCA 90 bp GAAGGATGGAAGCCCCGCGGCTCCTCCGGCGCCCAGCGGTGCTTTTaGTTTGGTGTCCGGATCCCAGCCCGCGGCCTGCCTGCCTGTCAG +
Preference number: 5 (lower is better)
Translates to: EGWKPRGSSGAQRCF*FGVRIPARGLPACQ
Trigger: CTGACAGGCAGGCAGGCCGCGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGAGGAGCCGCGGGGCTTCCATCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS GCA 90 bp TCAAAGGAAGGATGGAAGCCCCGCGGCTCCTCCGGCGCCCAGCGGTaGTTTTGCTTTGGTGTCCGGATCCCAGCCCGCGGCCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SKEGWKPRGSSGAQR*FCFGVRIPARGLPA
Trigger: GGCAGGCAGGCCGCGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGAGGAGCCGCGGGGCTTCCATCCTTCCTTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS CCA 90 bp CCAGAGCAGGTAGACAAAGAGCCACCGAAGCCTCCTCCGTTCCGGTaGCCTCGGAAGCCTGGAGGTGCCGACGGGGCTGGGGGCTCGACC +
Preference number: 5 (lower is better)
Translates to: PEQVDKEPPKPPPFR*PRKPGGADGAGGST
Trigger: GGTCGAGCCCCCAGCCCCGTCGGCACCTCCAGGCTTCCGAGGCCACCGGAACGGAGGAGGCTTCGGTGGCTCTTTGTCTACCTGCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS GCA 90 bp CCACCAGGTACTCGGCCAAGCGATTGGTCAGGTAGGTCTTGCCCGTaGCGCTGGGGCCCGAGAGGACGAGGCGCCGGTGCTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PPGTRPSDWSGRSCP*RWGPRGRGAGASAG
Trigger: TCCTGCTGAAGCACCGGCGCCTCGTCCTCTCGGGCCCCAGCGGCACGGGCAAGACCTACCTGACCAATCGCTTGGCCGAGTACCTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp GAGGAGAAGCTAATGGCCCCCGGAGAGGGAGAGGGGCGCTTGCCCTaGACTGGGCTGCAGACTGGAGAGGAAGCCCACGAAGCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: EEKLMAPGEGEGRLP*TGLQTGEEAHEAAP
Trigger: GGGGGCAGCTTCGTGGGCTTCCTCTCCAGTCTGCAGCCCAGTGCAGGGCAAGCGCCCCTCTCCCTCTCCGGGGGCCATTAGCTTCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CCA 90 bp CCGCTCTCGCCTGACACCCGGGGACACCCGAAAAGGTATGAGCTGTaGGCCACGCGGAGGGTCGGAAACCTAACCCTCGCCTGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: PLSPDTRGHPKRYEL*ATRRVGNLTLACPP
Trigger: CGGAGGGCAGGCGAGGGTTAGGTTTCCGACCCTCCGCGTGGCCCACAGCTCATACCTTTTCGGGTGTCCCCGGGTGTCAGGCGAGAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367295.5
CDS CCA 90 bp CGCCCGCCGGGCTGCCCTTGGCCTGGAAGAGCGAGTGCTCCGACTTaGACAGCGTCTTGGACATCAGCGGAGCTTCACGGCCCTTGGACC +
Preference number: 5 (lower is better)
Translates to: RPPGCPWPGRASAPT*TASWTSAELHGPWT
Trigger: GGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGCCAAGGGCAGCCCGGCGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp AGCTCCCACCCACAGAGGGCGCGTCACCAGCCTGCAGCCGCGGACTaGACTGGCCATAGCGCCATGACAGAGGGGACGAGCGGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSHPQRARHQPAAAD*TGHSAMTEGTSGWR
Trigger: TCTCCAACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAGTCCAGTCCGCGGCTGCAGGCTGGTGACGCGCCCTCTGTGGGTGGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp CCCCTGGGATGCCAGCTGTGGTCCCTTGGGCGCTCTTACTCGCGCTaGACTGGCAGGAGGGGGTGTGAGCAGCGAGCCACTTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PLGCQLWSLGRSYSR*TGRRGCEQRATSLW
Trigger: CCAGAGAGAAGTGGCTCGCTGCTCACACCCCCTCCTGCCAGTGCAGCGCGAGTAAGAGCGCCCAAGGGACCACAGCTGGCATCCCAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CCA 90 bp GGTACTCGGCCAAGCGATTGGTCAGGTAGGTCTTGCCCGTGCCGCTaGGGCCCGAGAGGACGAGGCGCCGGTGCTTCAGCAGGAGGCTTA +
Preference number: 5 (lower is better)
Translates to: GTRPSDWSGRSCPCR*GPRGRGAGASAGGL
Trigger: TAAGCCTCCTGCTGAAGCACCGGCGCCTCGTCCTCTCGGGCCCCAGCGGCACGGGCAAGACCTACCTGACCAATCGCTTGGCCGAGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 90 bp CACAGGGCGAGGTCCACCCCGCCCGCCGGTCACGCTCATAGAACTTaGCTTGGCTGGCCGGGGCAGGCTGCGGTACTGGATGTTAGAACG +
Preference number: 5 (lower is better)
Translates to: HRARSTPPAGHAHRT*LGWPGQAAVLDVRT
Trigger: CGTTCTAACATCCAGTACCGCAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTGACCGGCGGGCGGGGTGGACCTCGCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 90 bp GGCTGGGGGCTCGACCTCCACCTGGGCTGCTCCGAAATTAACCCCTaGGATGCCAGCTGTGGTCCCTTGGGCGCTCTTACTCGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: GWGLDLHLGCSEINP*DASCGPLGALTRAA
Trigger: TGCAGCGCGAGTAAGAGCGCCCAAGGGACCACAGCTGGCATCCCAGGGGTTAATTTCGGAGCAGCCCAGGTGGAGGTCGAGCCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CCA 90 bp GCGGACTGGACTGGCCATAGCGCCATGACAGAGGGGACGAGCGGTTaGAGAGGCTGGACACGCTGCGTGGGTTGGCATCATCGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: ADWTGHSAMTEGTSG*RGWTRCVGWHHRCR
Trigger: ACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAGTCCAGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS TCA 90 bp CATCCGAGTCCAGGGATTCGACCAGCTCCAGGCGGGAGATATGGCTaGGCTTGCTGGGGCTGCGCATGGGCATGGTGTGGGAGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: HPSPGIRPAPGGRYG*ACWGCAWAWCGSSG
Trigger: CCCACTACTCCCACACCATGCCCATGCGCAGCCCCAGCAAGCTCAGCCATATCTCCCGCCTGGAGCTGGTCGAATCCCTGGACTCGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp AGCGCCATGACAGAGGGGACGAGCGGTTGGAGAGGCTGGACACGCTaGGTGGGTTGGCATCATCGCTGTCGTAGCAGGTCATCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SAMTEGTSGWRGWTR*VGWHHRCRSRSSPG
Trigger: CCCTGGAGATGACCTGCTACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGTCATGGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAGAGGGGACGAGCGGTaGGAGAGGCTGGACACGCTG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAARGDER*ERLDTL
Trigger: CAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp GCGTCTTGGACATCAGCGGAGCTTCACGGCCCTTGGACCCCACCTTaGCTAAGCCTTTGGGCGCCTTGGCCATATCGTCGCTCCATTCGG +
Preference number: 5 (lower is better)
Translates to: ASWTSAELHGPWTPP*LSLWAPWPYRRSIR
Trigger: CCGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp GAAGGCCGCCTCGTGGGTGGGGATGCTGTTGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGGACTCACTATGTTGGTAAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: EGRLVGGDAVGAGDS*RGGRSGTHYVGKLA
Trigger: GGCCAACTTACCAACATAGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 90 bp CCCACGGTGGGTGGGGGCAGGTGGTACAGCTTTGATTGGTCTTGTTaGGCTGATGGCCAGGGAAGTGTGTCCCGGACCCATTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: PTVGGGRWYSFDWSC*ADGQGSVSRTHSTG
Trigger: CCCAGTGGAATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp TGCCCTTGGCCTGGAAGAGCGAGTGCTCCGACTTGGACAGCGTCTTaGACATCAGCGGAGCTTCACGGCCCTTGGACCCCACCTTGCCTA +
Preference number: 5 (lower is better)
Translates to: CPWPGRASAPTWTAS*TSAELHGPWTPPCL
Trigger: TAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGCCAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp ACAGAGGGGACGAGCGGTTGGAGAGGCTGGACACGCTGCGTGGGTTaGCATCATCGCTGTCGTAGCAGGTCATCTCCAGGGAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: TEGTSGWRGWTRCVG*HHRCRSRSSPGSCE
Trigger: CTCACAGCTCCCTGGAGATGACCTGCTACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp ACTGGCCATAGCGCCATGACAGAGGGGACGAGCGGTTGGAGAGGCTaGACACGCTGCGTGGGTTGGCATCATCGCTGTCGTAGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TGHSAMTEGTSGWRG*TRCVGWHHRCRSRS
Trigger: TGACCTGCTACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp CCTGGGTGCCTTGTCTCTCGCCAATTCTTCCGGATCCAGCCCGGCTaGAGAGGGCTGCTTTCGGGGTTGTCCTGGGACTATTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: PGCLVSRQFFRIQPG*RGLLSGLSWDYSMG
Trigger: CCCCATGGAATAGTCCCAGGACAACCCCGAAAGCAGCCCTCTCCAGCCGGGCTGGATCCGGAAGAATTGGCGAGAGACAAGGCACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367302.5
ENST00000593583.1
CDS GCA 90 bp CTTGCCCTGCACTGGGCTGCAGACTGGAGAGGAAGCCCACGAAGCTaGCCCCTCATCAGGCTCCAAAGACCTGGGGGTCCCAGAACTTTT +
Preference number: 5 (lower is better)
Translates to: LALHWAADWRGSPRS*PLIRLQRPGGPRTF
Trigger: AAAAGTTCTGGGACCCCCAGGTCTTTGGAGCCTGATGAGGGGGCAGCTTCGTGGGCTTCCTCTCCAGTCTGCAGCCCAGTGCAGGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CCA 90 bp GGCACTCTGGGCTGTGTGAGTGATGGGGGAAGTTACAGCCACAGGTaGGGTCTTGCCCTTCTTCAGGGAACCAGGGTGGCCCAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: GTLGCVSDGGSYSHR*GLALLQGTRVAQAD
Trigger: ATCAGCCTGGGCCACCCTGGTTCCCTGAAGAAGGGCAAGACCCCACCTGTGGCTGTAACTTCCCCCATCACTCACACAGCCCAGAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 90 bp CCGACTTGGACAGCGTCTTGGACATCAGCGGAGCTTCACGGCCCTTaGACCCCACCTTGCCTAAGCCTTTGGGCGCCTTGGCCATATCGT +
Preference number: 5 (lower is better)
Translates to: PTWTASWTSAELHGP*TPPCLSLWAPWPYR
Trigger: ACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCGCCCACTGGCTACCTaGGTAGGCTCCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAARPLAT*VGSFSL
Trigger: CAGACTGAAGGAGCCTACCAAGGTAGCCAGTGGGCG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGACAGAGGGCCCAGATaGGGGGTGGCCTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELDRGPR*GVASVV
Trigger: CACCACTGAGGCCACCCCCAATCTGGGCCCTCTGTC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTCCACGCTGCCGGACTaGAAGACCTTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAASTLPD*KTFSSA
Trigger: GGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTCTGCTTGCGCAGGTaGGAGGCGGGCGGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYFCLRR*EAGGPP
Trigger: CGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGGGCTTCAGCCCAGCCTaGACAGCATGGTGGCTGACA +
Preference number: 5 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKGFSPA*TAWWLT
Trigger: TGTCAGCCACCATGCTGTCAAGGCTGGGCTGAAGCC...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS TCA 90 bp GTGCTGTCTTTGACTGTCCTATCCTCGGGAGGTGAGGCAATGCTGTaGGGGCCCACGGTGGGTGGGGGCAGGTGGTACAGCTTTGATTGG +
Preference number: 5 (lower is better)
Translates to: VLSLTVLSSGGEAML*GPTVGGGRWYSFDW
Trigger: CCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp GCTACCTTGGTAGGCTCCTTCAGTCTGGAAGGCGTAAGGCCTCCCTaGTTGGTGCTGAGGAGACTGGGGTCAATGCTGCTGCTCACAGGG +
Preference number: 5 (lower is better)
Translates to: ATLVGSFSLEGVRPP*LVLRRLGSMLLLTG
Trigger: CCCTGTGAGCAGCAGCATTGACCCCAGTCTCCTCAGCACCAAGCAGGGAGGCCTTACGCCTTCCAGACTGAAGGAGCCTACCAAGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS GCA 90 bp TTGTCTCTCGCCAATTCTTCCGGATCCAGCCCGGCTGGAGAGGGCTaGTTTCGGGGTTGTCCTGGGACTATTCCATGGGGAGCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LSLANSSGSSPAGEG*FRGCPGTIPWGAEG
Trigger: CCCTTCAGCTCCCCATGGAATAGTCCCAGGACAACCCCGAAAGCAGCCCTCTCCAGCCGGGCTGGATCCGGAAGAATTGGCGAGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367302.5
ENST00000593583.1
CDS CCA 90 bp ACGCTCATAGAACTTGACTTGGCTGGCCGGGGCAGGCTGCGGTACTaGATGTTAGAACGGGCTCCAGGAGCCAGGAATCCTGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TLIELDLAGRGRLRY*MLERAPGARNPGSA
Trigger: TGCAGAGCCAGGATTCCTGGCTCCTGGAGCCCGTTCTAACATCCAGTACCGCAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 90 bp TCAGCGGAGCTTCACGGCCCTTGGACCCCACCTTGCCTAAGCCTTTaGGCGCCTTGGCCATATCGTCGCTCCATTCGGGCTCATAAAGCT +
Preference number: 5 (lower is better)
Translates to: SAELHGPWTPPCLSL*APWPYRRSIRAHKA
Trigger: AGCTTTATGAGCCCGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCAGGTGAGGGCCCCATaGACCAACTCACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAQVRAP*TNSLME
Trigger: CTCCATCAGTGAGTTGGTCAATGGGGCCCTCACCTG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGAGCCAAGAATCCCTTaGGGGTCGGAGGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAEPRIP*GSEAVG
Trigger: TCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCTC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATTCTGCTTGCGCAGGTaGGAGGCGGGCGGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGFCLRR*EAGGPP
Trigger: CGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGAA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCGATCCGGCTCAGCTGTaGTTTACAGCTTTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: VGMLLERVILGVVAAVGLDPAQL*FTALGE
Trigger: TTCCCCCAAAGCTGTAAACAACAGCTGAGCCGGATC...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS TCA 90 bp TTGCCCTCAGGTTTGCCTGCGACTTTGAGGGCACTCTGGGCTGTGTaGGTGATGGGGGAAGTTACAGCCACAGGTGGGGTCTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LPSGLPATLRALWAV*VMGEVTATGGVLPF
Trigger: GAAGGGCAAGACCCCACCTGTGGCTGTAACTTCCCCCATCACTCACACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAACCTGAGGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 90 bp AGGTCATCTCCAGGGAGCTGTGAGTCACCTGGGACCCTCGCAGGCTaGACATGGTCTCTTCCAGGTTCTGCCGGAGATCCAGGACATTCT +
Preference number: 5 (lower is better)
Translates to: RSSPGSCESPGTLAG*TWSLPGSAGDPGHS
Trigger: AGAATGTCCTGGATCTCCGGCAGAACCTGGAAGAGACCATGTCCAGCCTGCGAGGGTCCCAGGTGACTCACAGCTCCCTGGAGATGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCGCCCACTGGCTACCTaGGTAGGCTCCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELRPLAT*VGSFSL
Trigger: CAGACTGAAGGAGCCTACCAAGGTAGCCAGTGGGCG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGCTCGGGGTCCACCTaGAGGAAGGCGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSSGST*RKARSS
Trigger: GGAGGAGCGCGCCTTCCTCAAGGTGGACCCCGAGCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGCCTGGCAGAAACTATTaGGTGCGTTTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKPGRNY*VRFFLL
Trigger: GAGGAGGAAGAAACGCACCAAATAGTTTCTGCCAGG...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp GGCTTTGGCCTTCTCCTTTTCCCGATCTGTCTGATTGACAGGGGCTaGAGTGGTCCGCCCACTGGCTACCTTGGTAGGCTCCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: GFGLLLFPICLIDRG*SGPPTGYLGRLLQS
Trigger: AGACTGAAGGAGCCTACCAAGGTAGCCAGTGGGCGGACCACTCCAGCCCCTGTCAATCAGACAGATCGGGAAAAGGAGAAGGCCAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 90 bp GCCGGTGCTTCAGCAGGAGGCTTATGTAGTGCTGCATCATCGGCTTaGGGATCAGCGTCTCGAACACCAGGCTGTCGACGCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AGASAGGLCSAASSA*GSASRTPGCRRISP
Trigger: AGGAGAAATGCGTCGACAGCCTGGTGTTCGAGACGCTGATCCCCAAGCCGATGATGCAGCACTACATAAGCCTCCTGCTGAAGCACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp CTTCACGGCCCTTGGACCCCACCTTGCCTAAGCCTTTGGGCGCCTTaGCCATATCGTCGCTCCATTCGGGCTCATAAAGCTGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LHGPWTPPCLSLWAP*PYRRSIRAHKAAAF
Trigger: AAAAGCTGCAGCTTTATGAGCCCGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGAGGACTTCTGGATCTaGCTGAGAGTGGCTGAACCA +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAEDFWI*LRVAEP
Trigger: TGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGCTAGTGAGGGTGGTTaGACAAAGCTCTTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAASEGG*TKLFAV
Trigger: CACAGCGAAGAGCTTTGTCAAACCACCCTCACTAGC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGCAGGGTGCTCCCCATTaGGGAGCCGCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: LPKETAQKRQLGMKESDQQGAPH*GAAVQL
Trigger: GAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTG...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCGAACCAGGAAGCCATaGGCTGGCTCCACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELRTRKP*AGSTLL
Trigger: CAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTCG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGATGAGGAACTGCGCTaGGTGATCTGGGTCACTTCA +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAADEELR*VIWVTS
Trigger: TGAAGTGACCCAGATCACCAAGCGCAGTTCCTCATC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTCGGGCTGCACGCTCTaGACGCTGCTGCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSGCTL*TLLPSI
Trigger: AATGCTGGGCAGCAGCGTCAAGAGCGTGCAGCCCGA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGTGAGTGACTTCTGCTaGCGCAGGTTGGAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPVSDFC*RRLEAG
Trigger: GCCCGCCTCCAACCTGCGCAAGCAGAAGTCACTCAC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGAGCTCTTTTGCGCCTaGGCCTTGCTGGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSELFCA*ALLESS
Trigger: GCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCTC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAGAGGGGACGAGCGGTaGGAGAGGCTGGACACGCTG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVRGDER*ERLDTL
Trigger: CAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGAGATATGGCTGAGCTaGCTGGGGCTGCGCATGGGC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPEIWLS*LGLRMG
Trigger: GCCCATGCGCAGCCCCAGCAAGCTCAGCCATATCTC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAACCGCCCCAGCAAACTaGGGAGAGCCTCTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGTAPAN*GEPLPR
Trigger: CCGGGGGAGAGGCTCTCCCAAGTTTGCTGGGGCGGT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CAA 90 bp GTGGGGATGCTGTTGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCCAGGTCTTCTCTGGTTaGCTTCTCTACATCCTGCAT +
Preference number: 5 (lower is better)
Translates to: VGMLLERVILGVVAAVGLQVFSG*LLYILH
Trigger: ATGCAGGATGTAGAGAAGCAAACCAGAGAAGACCTG...GAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS TCA 90 bp AGGGTGGCCCAGGCTGATGGGCTTTTTCAGTTCTCCACCCTTGGATaGATCATCACAGCTCTCAGGCCGCTCCCTCCGCCACTTAGAAGT +
Preference number: 5 (lower is better)
Translates to: RVAQADGLFQFSTLG*IITALRPLPPPLRS
Trigger: ACTTCTAAGTGGCGGAGGGAGCGGCCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 90 bp CAGGTGGGGTCTTGCCCTTCTTCAGGGAACCAGGGTGGCCCAGGCTaGTGGGCTTTTTCAGTTCTCCACCCTTGGATGAATCATCACAGC +
Preference number: 5 (lower is better)
Translates to: QVGSCPSSGNQGGPG*WAFSVLHPWMNHHS
Trigger: GCTGTGATGATTCATCCAAGGGTGGAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCTGGTTCCCTGAAGAAGGGCAAGACCCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 90 bp GCAGGCCTGAGAGTTTGGGGTACATGCGGGTCTCTTTTGGCACACTaGAACCACTCATTAGCTCCAGGCCCTGGGAGAAGCTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: AGLRVWGTCGSLLAH*NHSLAPGPGRSWLS
Trigger: ACTCAGCCAGCTTCTCCCAGGGCCTGGAGCTAATGAGTGGTTTCAGTGTGCCAAAAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 90 bp GAGGCTCATTGGCATCTGGAGGGACTCCATGCTCCTGTGCAGGCCTaGGAGTTTGGGGTACATGCGGGTCTCTTTTGGCACACTGAAACC +
Preference number: 5 (lower is better)
Translates to: EAHWHLEGLHAPVQA*EFGVHAGLFWHTET
Trigger: GGTTTCAGTGTGCCAAAAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGATGCCAATGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 90 bp TGGCCATCAGAGGATCTGAGTCCAGAGAACTTGGGGTGCTGTCTTTaGCTGTCCTATCCTCGGGAGGTGAGGCAATGCTGTGAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: WPSEDLSPENLGCCL*LSYPREVRQCCEGP
Trigger: TGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTCTGATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp GAGAAGGCAGCTCTGACTGGTCATCGGATTCAGGCAGCCCACCAATaGTATGGGAATGTCGCCTCTCCTTGGTCTCCTCCTGGGACTGAA +
Preference number: 5 (lower is better)
Translates to: EKAALTGHRIQAAHQ*YGNVASPWSPPGTE
Trigger: TTCAGTCCCAGGAGGAGACCAAGGAGAGGCGACATTCCCATACCATTGGTGGGCTGCCTGAATCCGATGACCAGTCAGAGCTGCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 90 bp GTCTTTTCCTGGGCAGCTTGGAGGCTTCCGACCTTCCGGAGCCCCTaGTATTTGAGTTTCTCCGTGAAAGCTCGTCCGAGAAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VFSWAAWRLPTFRSP*YLSFSVKARPRRAS
Trigger: AGAAGCCCTTCTCGGACGAGCTTTCACGGAGAAACTCAAATACCAGGGGCTCCGGAAGGTCGGAAGCCTCCAAGCTGCCCAGGAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGCCACAGGTGGGGTCTaGCCCTTCTTCAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTATGGV*PFFREP
Trigger: TGGTTCCCTGAAGAAGGGCAAGACCCCACCTGTGGC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGGCAGCTCTGCCAGCTaGGTGGCTGTGGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPGSSAS*VAVGWL
Trigger: AAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGCC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTGCAGGCCTGAGAGTTaGGGGTACATGCGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLCRPES*GYMRVS
Trigger: AGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSWVGML*ERVILG
Trigger: GCCAAGAATCACCCGCTCCAACAGCATCCCCACCCA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGATACCAAAGGGCTCTCTGGATAAGAGGCAGGCTAGTTCGGAAAGGTGCTCAGTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GYQRALWIRGRLVRKGAQWVGML*ERVILG
Trigger: GCCAAGAATCACCCGCTCCAACAGCATCCCCACCCA...CTGAGCACCTTTCCGAACTAGCCTGCCTCTTATCCAGAGAGCCCTTTGGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCAGGGTGCTCCCCATTaGGGAGCCGCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIQGAPH*GAAVQL
Trigger: GAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCTGCTGCATCATCGGCTaGGGGATCAGCGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSCCIIG*GISVSN
Trigger: GTTCGAGACGCTGATCCCCAAGCCGATGATGCAGCA...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGACTGCTGGTGCATGTaGAAGGTGCTGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLDCWCM*KVLTMP
Trigger: GGGCATCGTCAGCACCTTCAACATGCACCAGCAGTC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCCAGGTGAGGGCCCCATaGACCAACTCACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSQVRAP*TNSLME
Trigger: CTCCATCAGTGAGTTGGTCAATGGGGCCCTCACCTG...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGACAGAGGGCCCAGATaGGGGGTGGCCTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGDRGPR*GVASVV
Trigger: CACCACTGAGGCCACCCCCAATCTGGGCCCTCTGTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTCGGGCTGCACGCTCTaGACGCTGCTGCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISGCTL*TLLPSI
Trigger: AATGCTGGGCAGCAGCGTCAAGAGCGTGCAGCCCGA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGAGCTTCACGGCCCTaGGACCCCACCTTGCCTAAG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGASRP*DPTLPK
Trigger: CTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAGCTCGTCGTCCGATTaGCCATCTTCGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSSSSD*PSSLTA
Trigger: GGCCGTGAGCGAAGATGGCAAATCGGACGACGAGCT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCAGGCCCAGAGCTCTTTaGCGCCTTGGCCTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSRPRAL*RLGLAG
Trigger: TCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCCT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTTTCCCTGGGTGCCTaGTCTCTCGCCAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELLSLGA*SLANSS
Trigger: GGAAGAATTGGCGAGAGACAAGGCACCCAGGGAAAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGGCTCAGAAAAGGCAGTaGGGAATGAAGGAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKAQKRQ*GMKESD
Trigger: GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGC...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCAAGCAGGAGAATCGCTaGAACCTGGGAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGKQENR*NLGGRV
Trigger: AACTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCTT...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS GCA 90 bp GAGGTGGAGGACTTGATGGAGGGTGAAGCAGTCTCTGTAGAACCATaGTGTAGTTTGGGGGATGAGGGGGCTGAAGAGTCGGGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: EVEDLMEGEAVSVEP*CSLGDEGAEESGVA
Trigger: TGCTACACCCGACTCTTCAGCCCCCTCATCCCCCAAACTACAGCATGGTTCTACAGAGACTGCTTCACCCTCCATCAAGTCCTCCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp AAGATAGCTGATGCCAGCGTTCTGCTGTCCGGGGGTGACAGTGATTaGCGAACCCTTAAAGTGTTGCCTGAAGGTTGGGGTCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: KIADASVLLSGGDSD*RTLKVLPEGWGPGW
Trigger: CCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCCGGACAGCAGAACGCTGGCATCAGCTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGCCACAGGTGGGGTCTaGCCCTTCTTCAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIATGGV*PFFREP
Trigger: TGGTTCCCTGAAGAAGGGCAAGACCCCACCTGTGGC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGTTTGCCTGCGACTTaGAGGGCACTCTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGLPAT*RALWAV
Trigger: CACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAACC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGGTTTGCCTGCGACTTaGAGGGCACTCTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIGLPAT*RALWAV
Trigger: CACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAACC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGCTTTGCCCTCAGGTTaGCCTGCGACTTTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTALPSG*PATLRA
Trigger: TGCCCTCAAAGTCGCAGGCAAACCTGAGGGCAAAGC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTACATCTAAGCTAGTCTaGCGCCCATTTACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAATSKLV*RPFTGL
Trigger: CAAGCCAGTAAATGGGCGCAAGACTAGCTTAGATGT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCGCCCACTGGCTACCTaGGTAGGCTCCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVRPLAT*VGSFSL
Trigger: CAGACTGAAGGAGCCTACCAAGGTAGCCAGTGGGCG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGCCACTGCCTTGGCTTaGGCCTTCTCCTTTTCCCGA +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSATALA*AFSFSR
Trigger: TCGGGAAAAGGAGAAGGCCAAAGCCAAGGCAGTGGC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTGGCTGTGGGGTGGCTaGCTTGGTTCTTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPWLWGG*LGSWEY
Trigger: GTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCTGTTGGAGTTGACCTaGTCAAGATTGGCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAALLELT*SRLASE
Trigger: CTCACTAGCCAATCTTGACAAGGTCAACTCCAACAG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTTCCAGACTGTTGGAGTaGACCTTGTCAAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAASRLLE*TLSRLA
Trigger: AGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGA...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCTGATTACTGTCCAGTaGCCCAGCTCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTLITVQ*PSSGAS
Trigger: GGAAGCCCCAGAGCTGGGCAACTGGACAGTAATCAG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTACCTGAGCCCTTTCTaGGGAAGAGTGTTCCGATCC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELYLSPF*GRVFRS
Trigger: GGATCGGAACACTCTTCCCAAGAAAGGGCTCAGGTA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTCACTATGTTGGTAAGTaGGCCCTTTGCACTCAGAGA +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAHYVGK*ALCTQR
Trigger: TCTCTGAGTGCAAAGGGCCAACTTACCAACATAGTG...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCAGGGTGCTCCCCATTaGGGAGCCGCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPQGAPH*GAAVQL
Trigger: GAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTGCTTCAAGTCCCCTTaGATGATGTGCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTCFKSP*MMCCGG
Trigger: GCCCCCGCAGCACATCATCAAAGGGGACTTGAAGCA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGACTGCTGGTGCATGTaGAAGGTGCTGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPDCWCM*KVLTMP
Trigger: GGGCATCGTCAGCACCTTCAACATGCACCAGCAGTC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGCAGGTGGTACAGCTTaGATTGGTCTTGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELAGGTA*IGLVGL
Trigger: CAGCCCAACAAGACCAATCAAAGCTGTACCACCTGC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGGGCAGCTCTCTACCTaGGCAACTGGTTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSGQLST*ATGSSL
Trigger: GAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTTGGCAGCCGTCTTGTaGATGTCCCCTATGTCATCC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELLAAVL*MSPMSS
Trigger: GGATGACATAGGGGACATCAACAAGACGGCTGCCAA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGAGCCAAGAATCCCTTaGGGGTCGGAGGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTEPRIP*GSEAVG
Trigger: TCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCTC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGTCTTGTGCCATACTTaGCGAACCACTGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAVLCHT*RTTALR
Trigger: CCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGAC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGCGGTGCTTTTGCTTaGGTGTCCGGATCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISGAFA*VSGSQP
Trigger: GGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGAGCTTCACGGCCCTaGGACCCCACCTTGCCTAAG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGASRP*DPTLPK
Trigger: CTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGCGAGTGCTCCGACTaGGACAGCGTCTTGGACATC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSECSD*DSVLDI
Trigger: GATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGGAACATGACAAAAGTTaGGTTTGGAGTCACGGAATC +
Preference number: 5 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKEHDKS*VWSHGI
Trigger: GATTCCGTGACTCCAAACCAAACTTTTGTCATGTTC...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGAGAGGCATTCCACCGTTaGGCCACTAGGTGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: TTAWLEEVASFLPMSQGREAFHR*ATRCQV
Trigger: GACCTGACACCTAGTGGCCAAACGGTGGAATGCCTC...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTCTTTGCAGCTGCTCCTaGTTCCCGGATTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRLCSCS*FPDSPG
Trigger: ACCTGGAGAATCCGGGAACAAGGAGCAGCTGCAAAG...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS TCA 90 bp TGGGTACCCAGTCGAGCACCCGAAGCAGCTCTTCCTTGTTGGCATTaGTGTCGCTGTCTGACTCTACCAGCTTCCTCCTCAGGTAACGAA +
Preference number: 5 (lower is better)
Translates to: WVPSRAPEAALPCWH*CRCLTLPASSSGNE
Trigger: TTCGTTACCTGAGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACTGGGTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 90 bp ATGAGGAAGTCTGAGGTGCTGTGCTTCTCAAGGAAGGTGTGGAGATaGTACCACAGCTTGGGTACCCAGTCGAGCACCCGAAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: MRKSEVLCFSRKVWR*YHSLGTQSSTRSSS
Trigger: AGAGCTGCTTCGGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATCTCCACACCTTCCTTGAGAAGCACAGCACCTCAGACTTCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp TTCTGCTGTCCGGGGGTGACAGTGATTGCCGAACCCTTAAAGTGTTaGCTGAAGGTTGGGGTCCAGGATGGTTTCTCGATCTGGAGACTC +
Preference number: 5 (lower is better)
Translates to: FCCPGVTVIAEPLKC*LKVGVQDGFSIWRL
Trigger: GAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCCGGACAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 90 bp ACAGGTCTCCTCTACTTGCCTTCATGCCCTAGGAAGCTGGGGTCATaGCCCTGGTACTCCTCACTGACCAGTCCAGACATCACACTAAAG +
Preference number: 5 (lower is better)
Translates to: TGLLYLPSCPRKLGS*PWYSSLTSPDITLK
Trigger: CTTTAGTGTGATGTCTGGACTGGTCAGTGAGGAGTACCAGGGGCATGACCCCAGCTTCCTAGGGCATGAAGGCAAGTAGAGGAGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 90 bp TTAGCATCACTCAGGCGGTCCCGACCAGCATCAGAGGAGGAGCGTTaGAGCCCAGTATTCTTCACTGCAAGCTTACCCTTGTCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: LASLRRSRPASEEER*SPVFFTASLPLSVA
Trigger: AGCTACAGACAAGGGTAAGCTTGCAGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGATGCTGGTCGGGACCGCCTGAGTGATGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 90 bp GCAGCTCTGCCAGCTTGGTGGCTGTGGGGTGGCTTGCTTGGTTCTTaGGAGTACTTTCTGGGGAGCCAATACTCTTCAAGGAGATGTTGT +
Preference number: 5 (lower is better)
Translates to: AALPAWWLWGGLLGS*EYFLGSQYSSRRCC
Trigger: ACAACATCTCCTTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 90 bp CGGGTCTCTTTTGGCACACTGAAACCACTCATTAGCTCCAGGCCCTaGGAGAAGCTGGCTGAGTTAATATTGAGGATGGGTGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: RVSFGTLKPLISSRP*EKLAELILRMGAGL
Trigger: CAGTCCGGCACCCATCCTCAATATTAACTCAGCCAGCTTCTCCCAGGGCCTGGAGCTAATGAGTGGTTTCAGTGTGCCAAAAGAGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 90 bp AGGTGCTGTGCTTCTCAAGGAAGGTGTGGAGATGATACCACAGCTTaGGTACCCAGTCGAGCACCCGAAGCAGCTCTTCCTTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: RCCASQGRCGDDTTA*VPSRAPEAALPCWH
Trigger: ATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATCTCCACACCTTCCTTGAGAAGCACAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp CTCCTCTACTTGCCTTCATGCCCTAGGAAGCTGGGGTCATGCCCCTaGTACTCCTCACTGACCAGTCCAGACATCACACTAAAGGGTATC +
Preference number: 5 (lower is better)
Translates to: LLYLPSCPRKLGSCP*YSSLTSPDITLKGI
Trigger: GATACCCTTTAGTGTGATGTCTGGACTGGTCAGTGAGGAGTACCAGGGGCATGACCCCAGCTTCCTAGGGCATGAAGGCAAGTAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGGTTTGCCTGCGACTTaGAGGGCACTCTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGGLPAT*RALWAV
Trigger: CACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAACC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGCTTTGCCCTCAGGTTaGCCTGCGACTTTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWALPSG*PATLRA
Trigger: TGCCCTCAAAGTCGCAGGCAAACCTGAGGGCAAAGC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCCCTTGTCTGTAGCTTaGCCCTCAGGTTTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWPLSVA*PSGLPA
Trigger: CGCAGGCAAACCTGAGGGCAAAGCTACAGACAAGGG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCCCCTTGTCTGTAGCTTaGCCCTCAGGTTTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIPLSVA*PSGLPA
Trigger: CGCAGGCAAACCTGAGGGCAAAGCTACAGACAAGGG...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTCCAAGGCCACTGCCTaGGCTTTGGCCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSKATA*ALAFSF
Trigger: AAAGGAGAAGGCCAAAGCCAAGGCAGTGGCCTTGGA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTGGCTGTGGGGTGGCTaGCTTGGTTCTTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYWLWGG*LGSWEY
Trigger: GTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTGCAGGCCTGAGAGTTaGGGGTACATGCGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWCRPES*GYMRVS
Trigger: AGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTGATTACTGTCCAGTaGCCCAGCTCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLITVQ*PSSGAS
Trigger: GGAAGCCCCAGAGCTGGGCAACTGGACAGTAATCAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTTCGCATCAGCATCCTaGCTGCTGCCGATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSFASAS*LLPMLE
Trigger: TTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGAA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGATTCGCATCAGCATCCTaGCTGCTGCCGATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRFASAS*LLPMLE
Trigger: TTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGAA...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCCGAAGCTGATCCAGTaGGTGGGCAGAGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPPKLIQ*VGRVEG
Trigger: GCCCTCAACTCTGCCCACCAACTGGATCAGCTTCGG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCACCTCCAACTGCATGTaGTGCATGGTCTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSTSNCM*CMVSRS
Trigger: GCTTCGGGAGACCATGCACAACATGCAGTTGGAGGT...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTACCTCCAACTGCATGTaGTGCATGGTCTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPTSNCM*CMVSRS
Trigger: GCTTCGGGAGACCATGCACAACATGCAGTTGGAGGT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTGTTGGAAAGATACAGTaGCAGATCCTTGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAVGKIQ*QILARL
Trigger: CAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAAC...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACCAGGTGAGGGCCCCATaGACCAACTCACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYQVRAP*TNSLME
Trigger: CTCCATCAGTGAGTTGGTCAATGGGGCCCTCACCTG...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGGTAGTTGGCAGCTTCTaGAAGTTTCAGCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELVVGSF*KFQQHG
Trigger: GCCATGCTGCTGAAACTTCAAGAAGCTGCCAACTAC...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTCTCTGGGGGAGGAGTaGTTGGCAGTGGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSLGEE*LAVVME
Trigger: TTCCATCACCACTGCCAACAACTCCTCCCCCAGAGA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGGGCAGCTCTCTACCTaGGCAACTGGTTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVGQLST*ATGSSL
Trigger: GAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGGGCAGCTCTCTACCTaGGCAACTGGTTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIGQLST*ATGSSL
Trigger: GAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTTGGCAGCCGTCTTGTaGATGTCCCCTATGTCATCC +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLLAAVL*MSPMSS
Trigger: GGATGACATAGGGGACATCAACAAGACGGCTGCCAA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCAGGTGTCATGCCAATaGCATGGCATCAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELQVSCQ*HGIRFS
Trigger: GGAGAATCTGATGCCATGCAATTGGCATGACACCTG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGAGCCAAGAATCCCTTaGGGGTCGGAGGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYEPRIP*GSEAVG
Trigger: TCCAACTGCCTCCGACCCCAAAGGGATTCTTGGCTC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGAACCTCTCCTGGAGTaGTGGCTCTCCCCATTGGTT +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPEPLLE*WLSPLV
Trigger: AACCAATGGGGAGAGCCACAACTCCAGGAGAGGTTC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGTGAGTGACTTCTGCTaGCGCAGGTTGGAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCVSDFC*RRLEAG
Trigger: GCCCGCCTCCAACCTGCGCAAGCAGAAGTCACTCAC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGAAGCCTTTGGGCGCCTaGGCCATATCGTCGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVKPLGA*AISSLH
Trigger: ATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTT...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGCCGCTTCAGGCGCCTaGCTGAGCGGCTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSAASGA*LSGLTS
Trigger: GGAGGTCAAGCCGCTCAGCAAGGCGCCTGAAGCGGC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGCCGCTTCAGGCGCCTaGCTGAGCGGCTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHAASGA*LSGLTS
Trigger: GGAGGTCAAGCCGCTCAGCAAGGCGCCTGAAGCGGC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGAGATATGGCTGAGCTaGCTGGGGCTGCGCATGGGC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCEIWLS*LGLRMG
Trigger: GCCCATGCGCAGCCCCAGCAAGCTCAGCCATATCTC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTCCTCCGTCATGGTCTaGCCCATGAGGTCACTGTCG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVSSVMV*PMRSLS
Trigger: CGACAGTGACCTCATGGGCAAGACCATGACGGAGGA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTAACTATGTTGGTAAGTaGGCCCTTTGCACTCAGAGA +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAANYVGK*ALCTQR
Trigger: TCTCTGAGTGCAAAGGGCCAACTTACCAACATAGTT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CAA 90 bp CTCTCGGCCAGGGACAGGGTGCTCCCCATTTGGGAGCCGCTGTACAGCTCGAAGGTCAAAATAACTGCCTaGATCTTTCCGTACTTCATG +
Preference number: 5 (lower is better)
Translates to: LSARDRVLPIWEPLYSSKVKITA*IFPYFM
Trigger: CATGAAGTACGGAAAGATCAAGGCAGTTATTTTGAC...CTTCGAGCTGTACAGCGGCTCCCAAATGGGGAGCACCCTGTCCCTGGCCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CATCTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACAGAAGACGCATGCCCTaGACGTCTCAGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: HLPKETAQKRQLGMKESDRRRMP*TSQSRG
Trigger: TCCCCTGGACTGAGACGTCAAGGGCATGCGTCTTCT...GTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTCACCCTTTCTTGCTTaGCAGCTGCTCCTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRSPFLA*QLLLVP
Trigger: GGGAACAAGGAGCAGCTGCAAAGCAAGAAAGGGTGA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCGGTTTAACTCCTGCATaGTGGAGTGGGCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCGLTPA*WSGPAP
Trigger: GGGGGCCGGCCCACTCCACAATGCAGGAGTTAAACC...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTAATAATGAAGCCAGGTaGAGGGTAGGGCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SREHRPWGLGRILTESFPNNEAR*RVGQVS
Trigger: GGAAACCTGCCCTACCCTCAACCTGGCTTCATTATT...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp GTCTTGCGCCCATTTACTGGCTTGACAGGGATGCCTGAGGACTTCTaGATCTTGCTGAGAGTGGCTGAACCACCAGTTTGCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: VLRPFTGLTGMPEDF*ILLRVAEPPVCMTV
Trigger: CACTGTCATGCAAACTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGCGCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 90 bp CTCTACCAGCTTCCTCCTCAGGTAACGAACCAGGAAGCCATTGGCTaGCTCCACGTTGTTGGAGAAGGTCAACATCCTGAAGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LYQLPPQVTNQEAIG*LHVVGEGQHPEAQV
Trigger: CACTTGAGCTTCAGGATGTTGACCTTCTCCAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTCGTTACCTGAGGAGGAAGCTGGTAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGTACTTGGGAGGGAGTaGAGTGAGGAGCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWVLGRE*SEELAL
Trigger: CAATGCCAGCTCCTCACTCAACTCCCTCCCAAGTAC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGAGGACTTCTGGATCTaGCTGAGAGTGGCTGAACCA +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPEDFWI*LRVAEP
Trigger: TGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTGGCTTGCTTGGTTCTaGGGAGTACTTTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPWLAWF*GVLSGE
Trigger: CTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTGTGGGGTGGCTTGCTaGGTTCTTGGGAGTACTTTC +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSCGVAC*VLGSTF
Trigger: GAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTGTGGGGTGGCTTGCTaGGTTCTTGGGAGTACTTTC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTCGVAC*VLGSTF
Trigger: GAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATGGCTGTGGGGTGGCTaGCTTGGTTCTTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGWLWGG*LGSWEY
Trigger: GTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGGCAGCTCTGCCAGCTaGGTGGCTGTGGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWGSSAS*VAVGWL
Trigger: AAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGCC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTGGCTGAGTTAATATaGAGGATGGGTGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLAELI*RMGAGL
Trigger: CAGTCCGGCACCCATCCTCAATATTAACTCAGCCAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATGCAGGCCTGAGAGTTaGGGGTACATGCGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGCRPES*GYMRVS
Trigger: AGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCTGATTACTGTCCAGTaGCCCAGCTCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPLITVQ*PSSGAS
Trigger: GGAAGCCCCAGAGCTGGGCAACTGGACAGTAATCAG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGACTTTTCCACTGACCTaGCTACAGCCCAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELTFPLT*LQPRKN
Trigger: ATTCTTCCTGGGCTGTAGCAAGGTCAGTGGAAAAGT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGACTGCTGGTGCATGTaGAAGGTGCTGACGATGCCC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPDCWCM*KVLTMP
Trigger: GGGCATCGTCAGCACCTTCAACATGCACCAGCAGTC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTCCCGGTCTATCTGGTaGGCTAGGTTGGAAAGATAC +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLSRSIW*ARLERY
Trigger: GTATCTTTCCAACCTAGCCAACCAGATAGACCGGGA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGCTTGGGGTGCTGTCTTaGACTGTCCTATCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVLGVLS*TVLSSG
Trigger: TCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAG...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCGAACCCTTAAAGTGTaGCCTGAAGGTTGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPRTLKV*PEGWGP
Trigger: TGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGCATCTACTCCTCGGTaGGGTGGAAGAGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWASTPR*GGRVIQ
Trigger: CTGGATCACTCTTCCACCCAACCGAGGAGTAGATGC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCGCCCAGCGGTGCTTTaGCTTTGGTGTCCGGATCCC +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWRPAVL*LWCPDP
Trigger: GGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCCCTTGGACCCCACCTaGCCTAAGCCTTTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHPLDPT*PKPLGA
Trigger: GGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGACTTGGACAGCGTCTaGGACATCAGCGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYDLDSV*DISGAS
Trigger: TGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAAGCTCGGGGTCCACCTaGAGGAAGGCGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSSGST*RKARSS
Trigger: GGAGGAGCGCGCCTTCCTCAAGGTGGACCCCGAGCT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGCTCACCCTTTGCCCATaGCTGGGATTACAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: RGESTTAWLEEVASFLPMLTLCP*LGLQPF
Trigger: GAAAGGCTGTAATCCCAGCAATGGGCAAAGGGTGAG...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGAGTGGGACTCACCCTTaGCCCATTGCTGGGATTACA +
Preference number: 5 (lower is better)
Translates to: LPKETAQKRQLGMKESDQSGTHP*PIAGIT
Trigger: TGTAATCCCAGCAATGGGCAAAGGGTGAGTCCCACT...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAAAGAGATTGCTAAGTaGCATAAGGCTGGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAKEIAK*HKAGGK
Trigger: CTTTCCCCCAGCCTTATGCAACTTAGCAATCTCTTT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp GGGGGTGACAGTGATTGCCGAACCCTTAAAGTGTTGCCTGAAGGTTaGGGTCCAGGATGGTTTCTCGATCTGGAGACTCAATGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: GGDSDCRTLKVLPEG*GPGWFLDLETQCSW
Trigger: CCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp TTCAGAAAGTCTATGGTTTCTCGCAAATCCAGCAGCTCAGTGTCCTaGGAGGCAGAGTTTGCAGTTAGCCAAGATCGCGCCAGTGCACTC +
Preference number: 5 (lower is better)
Translates to: FRKSMVSRKSSSSVS*EAEFAVSQDRASAL
Trigger: GAGTGCACTGGCGCGATCTTGGCTAACTGCAAACTCTGCCTCCCAGGACACTGAGCTGCTGGATTTGCGAGAAACCATAGACTTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTGCGTAGCACTATTGTaGAGTTCCTGCGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPCVALL*SSCEKQ
Trigger: CTGCTTCTCGCAGGAACTCAACAATAGTGCTACGCA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTGTGCGTAGCACTATaGTTGAGTTCCTGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPLCVAL*LSSCEK
Trigger: CTTCTCGCAGGAACTCAACAATAGTGCTACGCACAG...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCCACAGGTGGGGTCTaGCCCTTCTTCAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGATGGV*PFFREP
Trigger: TGGTTCCCTGAAGAAGGGCAAGACCCCACCTGTGGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTACTGCAAGCTTACCCTaGTCTGTAGCTTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPTASLP*SVALPS
Trigger: TGAGGGCAAAGCTACAGACAAGGGTAAGCTTGCAGT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTCCTGGCTCTGCACTGTaGGAAACATCTAAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTPGSAL*ETSKLV
Trigger: GACTAGCTTAGATGTTTCCAACAGTGCAGAGCCAGG...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCTCATAGAACTTGACTaGGCTGGCCGGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLIELD*AGRGRL
Trigger: CAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGCAGATCTGGGACCTTaGAAGCATGGGTGGTATCAC +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIADLGP*KHGWYH
Trigger: GTGATACCACCCATGCTTCAAAGGTCCCAGATCTGC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCGGATTCTCCAGGTTTGCAAGGCTGGAAGGAAACTGCAGAGGCATTCCACCGTTTGATCCGAAGTTCTTaGGGTGTGGTTTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PDSPGLQGWKETAEAFHRLIRSS*GVVSEA
Trigger: TGCCTCAGAAACCACACCCAAAGAACTTCGGATCAA...ACGGTGGAATGCCTCTGCAGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTGCTTCAAGTCCCCTTaGATGATGTGCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCCFKSP*MMCCGG
Trigger: GCCCCCGCAGCACATCATCAAAGGGGACTTGAAGCA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTCCCGGTCTATCTGGTaGGCTAGGTTGGAAAGATAC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTSRSIW*ARLERY
Trigger: GTATCTTTCCAACCTAGCCAACCAGATAGACCGGGA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCAAGTGCAAGCCATGGTaGGGTGTCATTTTTACAGGC +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSKCKPW*GVIFTG
Trigger: GCCTGTAAAAATGACACCCAACCATGGCTTGCACTT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCTTGGGGTGCTGTCTTaGACTGTCCTATCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPLGVLS*TVLSSG
Trigger: TCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTCTCTGGGGGAGGAGTaGTTGGCAGTGGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPSLGEE*LAVVME
Trigger: TTCCATCACCACTGCCAACAACTCCTCCCCCAGAGA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTTGGCAGCCGTCTTGTaGATGTCCCCTATGTCATCC +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLAAVL*MSPMSS
Trigger: GGATGACATAGGGGACATCAACAAGACGGCTGCCAA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTGCTCATCACATATCCTaGACCTGCAGAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPAHHIS*TCRVLK
Trigger: CTTCAGGACTCTGCAGGTCAAGGATATGTGATGAGC...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTATGTTACAGCTGAGTaGGTTAGGGATCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELYVTAE*VRDLHS
Trigger: GCTGTGAAGATCCCTAACCAACTCAGCTGTAACATA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGCTTCCCACCACAGAATaGCATATGTTACAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELLPTTE*HMLQLS
Trigger: ACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAG...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACATTTCAGCACCATCCTaGGACACACAGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYISAPS*DTQPLP
Trigger: GGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAAT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGGACTTGTAGCAGATTaGTCTTCCCTGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYGLVAD*SSLPAS
Trigger: AGAGGCTGGCAGGGAAGACAAATCTGCTACAAGTCC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGCAATATCTTCAGGCTTaGGCCTTTGGGGAACAGTGT +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLQYLQA*AFGEQC
Trigger: ACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTG...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGAGGAACACCATGCATTaGAGAAACACGGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLRNTMH*RNTDSV
Trigger: GACAGAGTCCGTGTTTCTCAAATGCATGGTGTTCCT...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTCCACGCTGCCGGACTaGAAGACCTTCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGSTLPD*KTFSSA
Trigger: GGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCCCTTGGACCCCACCTaGCCTAAGCCTTTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWPLDPT*PKPLGA
Trigger: GGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAGCGAGTGCTCCGACTaGGACAGCGTCTTGGACATC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSECSD*DSVLDI
Trigger: GATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGCCGTGAACATCGTCCGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTTCTTATGTTCTCTGTTaGCAACTCAGTCACAGGGGA +
Preference number: 5 (lower is better)
Translates to: SREHRPWGLGRILTESFPSYVLC*QLSHRG
Trigger: TCCCCTGTGACTGAGTTGCAAACAGAGAACATAAGA...AGGGAATGATTCGGTCAGGATCCTTCCGAGACCCCACGGACGATGTTCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCACAAGGAAACATTCAGAATCTaGGTGGAGATTCTTCTACCT +
Preference number: 5 (lower is better)
Translates to: LGCAGRDPGHLLWWVWHKETFRI*VEILLP
Trigger: AGGTAGAAGAATCTCCACCAAGATTCTGAATGTTTC...CTTGTGCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp TCACCAGGGGCACATCCCCAATTCCTGTTTCCCGGTCTATCTGGTTaGCTAGGTTGGAAAGATACAGTTGCAGATCCTTGCAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: SPGAHPQFLFPGLSG*LGWKDTVADPCKTA
Trigger: AGCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGCCCCTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp GGTTGGGGTCCAGGATGGTTTCTCGATCTGGAGACTCAATGTAGTTaGCAGCTTCTTGAAGTTTCAGCAGCATGGCCATCAGAGGATCTG +
Preference number: 5 (lower is better)
Translates to: GWGPGWFLDLETQCS*QLLEVSAAWPSEDL
Trigger: CAGATCCTCTGATGGCCATGCTGCTGAAACTTCAAGAAGCTGCCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCTTTGCCCTCAGGTTaGCCTGCGACTTTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGALPSG*PATLRA
Trigger: TGCCCTCAAAGTCGCAGGCAAACCTGAGGGCAAAGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCCCTTGTCTGTAGCTTaGCCCTCAGGTTTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGPLSVA*PSGLPA
Trigger: CGCAGGCAAACCTGAGGGCAAAGCTACAGACAAGGG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGACTGCAAGCTTACCCTaGTCTGTAGCTTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWTASLP*SVALPS
Trigger: TGAGGGCAAAGCTACAGACAAGGGTAAGCTTGCAGT...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCCGCCCATTTACTGGCTaGACAGGGATGCCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGRPFTG*TGMPED
Trigger: GTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGCG...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGCTCATAGAACTTGACTaGGCTGGCCGGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWLIELD*AGRGRL
Trigger: CAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAG...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGCCACTGCCTTGGCTTaGGCCTTCTCCTTTTCCCGA +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHATALA*AFSFSR
Trigger: TCGGGAAAAGGAGAAGGCCAAAGCCAAGGCAGTGGC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGGCAGCTCTGCCAGCTaGGTGGCTGTGGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRGSSAS*VAVGWL
Trigger: AAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGCC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGCTAGTGAGGGTGGTTaGACAAAGCTCTTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPASEGG*TKLFAV
Trigger: CACAGCGAAGAGCTTTGTCAAACCACCCTCACTAGC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCCTGTTGGAGTTGACCTaGTCAAGATTGGCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSLLELT*SRLASE
Trigger: CTCACTAGCCAATCTTGACAAGGTCAACTCCAACAG...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGGTAGATCCAGACTGTaGGAGTTGACCTTGTCAAGA +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTGRSRL*ELTLSR
Trigger: TCTTGACAAGGTCAACTCCAACAGTCTGGATCTACC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTACCTGAGCCCTTTCTaGGGAAGAGTGTTCCGATCC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPYLSPF*GRVFRS
Trigger: GGATCGGAACACTCTTCCCAAGAAAGGGCTCAGGTA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWWVGML*ERVILG
Trigger: GCCAAGAATCACCCGCTCCAACAGCATCCCCACCCA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGACCGAATCATTCCCTaGGGTCTCTCGGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHDRIIP*GLSARD
Trigger: GTCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCGACCGAATCATTCCCTaGGGTCTCTCGGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: WELGFSVVSWSLDRILMTDRIIP*GLSARD
Trigger: GTCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTC...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTGGCTAGTGATGCTGTaGAGGCTTGAGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPWLVML*RLEMLS
Trigger: AGATAGCATCTCAAGCCTCAACAGCATCACTAGCCA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACCGAAGCTGATCCAGTaGGTGGGCAGAGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAPKLIQ*VGRVEG
Trigger: GCCCTCAACTCTGCCCACCAACTGGATCAGCTTCGG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTGCTTCAAGTCCCCTTaGATGATGTGCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWCFKSP*MMCCGG
Trigger: GCCCCCGCAGCACATCATCAAAGGGGACTTGAAGCA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGATAGTCCTTGAACACTaGGAAAACAGCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELIVLEH*ENSFIQ
Trigger: CTGGATGAAGCTGTTTTCCAAGTGTTCAAGGACTAT...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGTACAGTTGCAGATCCTaGCAAGACTGCTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWYSCRS*QDCWCM
Trigger: CATGCACCAGCAGTCTTGCAAGGATCTGCAACTGTA...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTTGGCTGGCTCCACGTaGTTGGAGAAGGTCAACATC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPLAGST*LEKVNI
Trigger: GATGTTGACCTTCTCCAACAACGTGGAGCCAGCCAA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGCAGCTCTTCCTTGTaGGCATTGATGTCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSSSSL*ALMSLS
Trigger: AGACAGCGACATCAATGCCAACAAGGAAGAGCTGCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGCAGGTGGTACAGCTTaGATTGGTCTTGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGAGGTA*IGLVGL
Trigger: CAGCCCAACAAGACCAATCAAAGCTGTACCACCTGC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCGTAGTTGGCAGCTTCTaGAAGTTTCAGCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIVVGSF*KFQQHG
Trigger: GCCATGCTGCTGAAACTTCAAGAAGCTGCCAACTAC...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAGGTTGGCAGCCGTCTaGTTGATGTCCCCTATGTCA +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGRLAAV*LMSPMS
Trigger: TGACATAGGGGACATCAACAAGACGGCTGCCAACCT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCTTTCTAGCTGGCTCCTaGGGTTTCAGCTACATTTCT +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSFLAGS*GFSYIS
Trigger: AGAAATGTAGCTGAAACCCAAGGAGCCAGCTAGAAA...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCAGCCGTCTTGTTGATGTCCCCTATGTCATCCAGAGGGCAGGAGCGGGCAGCTATTGGACAAAACTTGTaGGTCTTCTTCATCCAGAAA +
Preference number: 5 (lower is better)
Translates to: AAVLLMSPMSSRGQERAAIGQNL*VFFIQK
Trigger: TTTCTGGATGAAGAAGACCAACAAGTTTTGTCCAAT...AGCTGCCCGCTCCTGCCCTCTGGATGACATAGGGGACATCAACAAGACGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGATGAGGAACTGCGCTaGGTGATCTGGGTCACTTCA +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPDEELR*VIWVTS
Trigger: TGAAGTGACCCAGATCACCAAGCGCAGTTCCTCATC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAAGCCTTTGGGCGCCTaGGCCATATCGTCGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHKPLGA*AISSLH
Trigger: ATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACAGCTCGTCGTCCGATTaGCCATCTTCGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHSSSSD*PSSLTA
Trigger: GGCCGTGAGCGAAGATGGCAAATCGGACGACGAGCT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTTTGCGCCTTGGCCTaGCTGGAGAGCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFCALA*LESSSS
Trigger: CGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAAGGCCCAGAGCTCTTTaGCGCCTTGGCCTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDARPRAL*RLGLAG
Trigger: TCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCCT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACTTTTCCTGGGCAGCTaGGAGGCTTCCGACCTTCCG +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALFLGS*EASDLP
Trigger: CGGAAGGTCGGAAGCCTCCAAGCTGCCCAGGAAAAG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CAA 90 bp CATCCACTGCTCCGCATGTCTGGAGCCTACTTCATAGGACCAGGGCTGGAGGCAAAACTACTGCGGAAATaGCAGACATGGTTACTTTTG +
Preference number: 5 (lower is better)
Translates to: HPLLRMSGAYFIGPGLEAKLLRK*QTWLLL
Trigger: CAAAAGTAACCATGTCTGCAATTTCCGCAGTAGTTT...TGCCTCCAGCCCTGGTCCTATGAAGTAGGCTCCAGACATGCGGAGCAGTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CTGCCCAAGGAGACTGCTCAGAAAAGGCAGTTGGGAATGAAGGAGTCAGACCAGGTGGGAACCAGCTTCTaGAATAATGAAGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPKETAQKRQLGMKESDQVGTSF*NNEARL
Trigger: CAACCTGGCTTCATTATTCAAGAAGCTGGTTCCCAC...CTGGTCTGACTCCTTCATTCCCAACTGCCTTTTCTGAGCAGTCTCCTTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp ATTTCCTGGGGTGTGCAGGACGTGACCCAGGCCATTTGCTTTGGTGGGTGTGGCAAACACAGAAAGAGATaGCTAAGTTGCATAAGGCTG +
Preference number: 5 (lower is better)
Translates to: ISWGVQDVTQAICFGGCGKHRKR*LSCIRL
Trigger: CAGCCTTATGCAACTTAGCAATCTCTTTCTGTGTTT...GCCACACCCACCAAAGCAAATGGCCTGGGTCACGTCCTGCACACCCCAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp CCAGATGCTGAGCTTGTAGCATGCAGATCTGGGACCTTTGAAGCATaGGTGGTATCACTGGATGATGGTAGATCCAGACTGTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: PDAELVACRSGTFEA*VVSLDDGRSRLLEL
Trigger: CAACTCCAACAGTCTGGATCTACCATCATCCAGTGATACCACCCATGCTTCAAAGGTCCCAGATCTGCATGCTACAAGCTCAGCATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 90 bp GCACATCCCCAATTCCTGTTTCCCGGTCTATCTGGTTGGCTAGGTTaGAAAGATACAGTTGCAGATCCTTGCAAGACTGCTGGTGCATGT +
Preference number: 5 (lower is better)
Translates to: AHPQFLFPGLSGWLG*KDTVADPCKTAGAC
Trigger: ACATGCACCAGCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 90 bp AGAATCACCAGGGGCACATCCCCAATTCCTGTTTCCCGGTCTATCTaGTTGGCTAGGTTGGAAAGATACAGTTGCAGATCCTTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: RITRGTSPIPVSRSI*LARLERYSCRSLQD
Trigger: GTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGCCCCTGGTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAGTGAGGAGCTGGCATaGAATTCTTCTGAACTGAGA +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPSEELA*NSSELR
Trigger: TCTCAGTTCAGAAGAATTCAATGCCAGCTCCTCACT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTACTTGGGAGGGAGTaGAGTGAGGAGCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVLGRE*SEELAL
Trigger: CAATGCCAGCTCCTCACTCAACTCCCTCCCAAGTAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCGCCCATTTACTGGCTaGACAGGGATGCCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHRPFTG*TGMPED
Trigger: GTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGCG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTCCAAGGCCACTGCCTaGGCTTTGGCCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWSKATA*ALAFSF
Trigger: AAAGGAGAAGGCCAAAGCCAAGGCAGTGGCCTTGGA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACTCTTCAAGGAGATGTaGTCTGAGTCCAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGLFKEM*SESKAT
Trigger: AGTGGCCTTGGACTCAGACAACATCTCCTTGAAGAG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTGGCTTGCTTGGTTCTaGGGAGTACTTTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCWLAWF*GVLSGE
Trigger: CTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTGTGGGGTGGCTTGCTaGGTTCTTGGGAGTACTTTC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCCGVAC*VLGSTF
Trigger: GAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCAGATCTGGGACCTTaGAAGCATGGGTGGTATCAC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCADLGP*KHGWYH
Trigger: GTGATACCACCCATGCTTCAAAGGTCCCAGATCTGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGACCGAATCATTCCCTaGGGTCTCTCGGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWDRIIP*GLSARD
Trigger: GTCCCTGGCCGAGAGACCCAAGGGAATGATTCGGTC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTGAGGAGTTTTGTCTCTaGATCCGAAGTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTEEFCL*IRSSLG
Trigger: ACCCAAAGAACTTCGGATCAAGAGACAAAACTCCTC...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTGGCTAGTGATGCTGTaGAGGCTTGAGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVWLVML*RLEMLS
Trigger: AGATAGCATCTCAAGCCTCAACAGCATCACTAGCCA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTCGCATCAGCATCCTaGCTGCTGCCGATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHFASAS*LLPMLE
Trigger: TTCCAGCATCGGCAGCAGCAAGGATGCTGATGCGAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGGCTCCAGCCAGATCTCTGGGGGAGGAGTTGTTGGCAGTGGTGATGGAATTGTTTATACTGAACGCTTaGTTGAAGGAACTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: WAPARSLGEELLAVVMELFILNA*LKELRS
Trigger: GCTTCGAAGTTCCTTCAACAAAGCGTTCAGTATAAA...CAATTCCATCACCACTGCCAACAACTCCTCCCCCAGAGATCTGGCTGGAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAACCGAAGCTGATCCAGTaGGTGGGCAGAGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKPKLIQ*VGRVEG
Trigger: GCCCTCAACTCTGCCCACCAACTGGATCAGCTTCGG...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACACTTTTCCACTGACCTaGCTACAGCCCAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYTFPLT*LQPRKN
Trigger: ATTCTTCCTGGGCTGTAGCAAGGTCAGTGGAAAAGT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCACTTTTCCACTGACCTaGCTACAGCCCAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGITFPLT*LQPRKN
Trigger: ATTCTTCCTGGGCTGTAGCAAGGTCAGTGGAAAAGT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCATAGTCCTTGAACACTaGGAAAACAGCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSIVLEH*ENSFIQ
Trigger: CTGGATGAAGCTGTTTTCCAAGTGTTCAAGGACTAT...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGAGACTGATATGTTATaGACACCTCGACGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWETDML*TPRRQG
Trigger: TCCTTGCCGTCGAGGTGTCAATAACATATCAGTCTC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTGCTGCATCATCGGCTaGGGGATCAGCGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWCCIIG*GISVSN
Trigger: GTTCGAGACGCTGATCCCCAAGCCGATGATGCAGCA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATGCTGCATCATCGGCTaGGGGATCAGCGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDACCIIG*GISVSN
Trigger: GTTCGAGACGCTGATCCCCAAGCCGATGATGCAGCA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCTGGCTCCACGTTGTaGGAGAAGGTCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAGSTL*EKVNIL
Trigger: CAGGATGTTGACCTTCTCCAACAACGTGGAGCCAGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCTCTTCCTTGTTGGCATaGATGTCGCTGTCTGACTCT +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISSLLA*MSLSDS
Trigger: AGAGTCAGACAGCGACATCAATGCCAACAAGGAAGA...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAGCAGCTCTTCCTTGTaGGCATTGATGTCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSSSSL*ALMSLS
Trigger: AGACAGCGACATCAATGCCAACAAGGAAGAGCTGCT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCTTGGGGTGCTGTCTTaGACTGTCCTATCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWLGVLS*TVLSSG
Trigger: TCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTAACTGCTGCAGTGTTTaGATGTTTTCTGAACCCCTC +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTNCCSV*MFSEPL
Trigger: GAGGGGTTCAGAAAACATCAAAACACTGCAGCAGTT...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTAACTGCTGCAGTGTTTaGATGTTTTCTGAACCCCTC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPNCCSV*MFSEPL
Trigger: GAGGGGTTCAGAAAACATCAAAACACTGCAGCAGTT...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCCAGGTGTCATGCCAATaGCATGGCATCAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPQVSCQ*HGIRFS
Trigger: GGAGAATCTGATGCCATGCAATTGGCATGACACCTG...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCGCTCATCACATATCCTaGACCTGCAGAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPAHHIS*TCRVLK
Trigger: CTTCAGGACTCTGCAGGTCAAGGATATGTGATGAGC...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCATCTACTCCTCGGTaGGGTGGAAGAGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGASTPR*GGRVIQ
Trigger: CTGGATCACTCTTCCACCCAACCGAGGAGTAGATGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTACCCAGCAGAACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTTATGTTACAGCTGAGTaGGTTAGGGATCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: ATQQNVCSQKGSQGNWVPYVTAE*VRDLHS
Trigger: GCTGTGAAGATCCCTAACCAACTCAGCTGTAACATA...AGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGTTCTGCTGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGGCTCTCCCCATTGGTaGACATTAGATATTGAATTC +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLGSPHW*TLDIEF
Trigger: GAATTCAATATCTAATGTCAACCAATGGGGAGAGCC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGTTCAGGCTTTGGCCTTaGGGGAACAGTGTTCATAAG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVFRLWP*GNSVHK
Trigger: CTTATGAACACTGTTCCCCAAAGGCCAAAGCCTGAA...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTCCAGAGGGAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTGCAGCTTTGGCATTTaGATAGGTATCCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: APEGKPRLQYYLTRREHTCSFGI*IGILPS
Trigger: TGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCA...AGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTCCCTCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTCCAACTGCTTTTCCTaGTTGAAGCCCCTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSNCFS*LKPLCV
Trigger: CACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGTGAGAAAAGAGAGGTaGGTGAGTGACTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVVRKER*VSDFCL
Trigger: CAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCAC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATACCTTGCCTAAGCCTTaGGGCGCCTTGGCCATATCG +
Preference number: 5 (lower is better)
Translates to: THTQTSGPTLASNDLVFYTLPKP*GALAIS
Trigger: CGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGT...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACACCTTGCCTAAGCCTTaGGGCGCCTTGGCCATATCG +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHTLPKP*GALAIS
Trigger: CGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGACTTGGACAGCGTCTaGGACATCAGCGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHDLDSV*DISGAS
Trigger: TGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATTTTGCGCCTTGGCCTaGCTGGAGAGCAGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKFCALA*LESSSS
Trigger: CGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAAA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAGCTCTTTTGCGCCTaGGCCTTGCTGGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWELFCA*ALLESS
Trigger: GCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCTC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCATCCTCCGTCATGGTCTaGCCCATGAGGTCACTGTCG +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSSSVMV*PMRSLS
Trigger: CGACAGTGACCTCATGGGCAAGACCATGACGGAGGA...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCTGGCCAATGGCAAGGTaGTTTCTGCCTCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLWPMAR*FLPPCR
Trigger: TCTGCATGGAGGCAGAAACAACCTTGCCATTGGCCA...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp TGTATAGGCAAGGTAAAGGGAATGAGGCCGGGGGCTAGAAAGGGGAGCACTTGGCAGACATGGTTACTTTaGTGCAAACACTTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: CIGKVKGMRPGARKGSTWQTWLL*CKHLES
Trigger: GCTTTCCAAGTGTTTGCACAAAAGTAACCATGTCTG...CCAAGTGCTCCCCTTTCTAGCCCCCGGCCTCATTCCCTTTACCTTGCCTATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp CGTTTGGCCACTAGGTGTCAGGTCTGTTTCATGAGGAGTGAAGGATACCAAAGGCTTCCTCTCCCTACATaGACCCTTCCCTTAATCCCA +
Preference number: 5 (lower is better)
Translates to: RLATRCQVCFMRSEGYQRLPLPT*TLPLIP
Trigger: TGGGATTAAGGGAAGGGTCAATGTAGGGAGAGGAAG...CCTTTGGTATCCTTCACTCCTCATGAAACAGACCTGACACCTAGTGGCCAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp GATGGAGAAATAGCCATCGTGAGACTATCTGAGCAAGTTGGTGACCCTAGCAAGCCGGATTCTCCAGGTTaGCAAGGCTGGAAGGAAACT +
Preference number: 5 (lower is better)
Translates to: DGEIAIVRLSEQVGDPSKPDSPG*QGWKET
Trigger: AGTTTCCTTCCAGCCTTGCAAACCTGGAGAATCCGG...CTTGCTAGGGTCACCAACTTGCTCAGATAGTCTCACGATGGCTATTTCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS TCA 90 bp GATGTCCTACCTTTGGGTGTGGTTTCTGAGGCATTAAGGGCTCCCTaGATGACTGCCTGGGCCTCAGAGTTCTTTTTCTTCAGAAAGTCT +
Preference number: 5 (lower is better)
Translates to: DVLPLGVVSEALRAP*MTAWASEFFFFRKS
Trigger: AGACTTTCTGAAGAAAAAGAACTCTGAGGCCCAGGCAGTCATTCAGGGAGCCCTTAATGCCTCAGAAACCACACCCAAAGGTAGGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS TCA 90 bp AGCGTGGGCCGCTGTGCCTGGCCTGGAGTAATTTCTGATCTTAACTaGTATAATTGGATTACTCTGGGGGCAAGGAAAGCACTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SVGRCAWPGVISDLN*YNWITLGARKALEE
Trigger: TTCTTCCAGTGCTTTCCTTGCCCCCAGAGTAATCCAATTATATCAGTTAAGATCAGAAATTACTCCAGGCCAGGCACAGCGGCCCACGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 90 bp GATTGCCGAACCCTTAAAGTGTTGCCTGAAGGTTGGGGTCCAGGATaGTTTCTCGATCTGGAGACTCAATGTAGTTGGCAGCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: DCRTLKVLPEGWGPG*FLDLETQCSWQLLE
Trigger: TTCAAGAAGCTGCCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGATCTTCTGAACTGAGATaGTCTGAGGCATCGCTGAGT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSSELR*SEASLS
Trigger: ACTCAGCGATGCCTCAGACAATCTCAGTTCAGAAGA...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGTACTTGGGAGGGAGTaGAGTGAGGAGCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: THTQTSGPTLASNDLVFYVLGRE*SEELAL
Trigger: CAATGCCAGCTCCTCACTCAACTCCCTCCCAAGTAC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGCCACTGCCTTGGCTTaGGCCTTCTCCTTTTCCCGA +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWATALA*AFSFSR
Trigger: TCGGGAAAAGGAGAAGGCCAAAGCCAAGGCAGTGGC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCCAAGGCCACTGCCTaGGCTTTGGCCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISKATA*ALAFSF
Trigger: AAAGGAGAAGGCCAAAGCCAAGGCAGTGGCCTTGGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGCTAGTGAGGGTGGTTaGACAAAGCTCTTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGASEGG*TKLFAV
Trigger: CACAGCGAAGAGCTTTGTCAAACCACCCTCACTAGC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACACTATGTTGGTAAGTaGGCCCTTTGCACTCAGAGA +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGHYVGK*ALCTQR
Trigger: TCTCTGAGTGCAAAGGGCCAACTTACCAACATAGTG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCTTGATCCGAAGTTCTTaGGGTGTGGTTTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPLIRSS*GVVSEA
Trigger: TGCCTCAGAAACCACACCCAAAGAACTTCGGATCAA...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GCTATACCTTCTCATGACAGAGGCTGGCAATTGAGCTACCCAGCAGAACGTGTGGAGGAGTTTTGTCTCTaGATCCGAAGTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: AIPSHDRGWQLSYPAERVEEFCL*IRSSLG
Trigger: ACCCAAAGAACTTCGGATCAAGAGACAAAACTCCTC...CACACGTTCTGCTGGGTAGCTCAATTGCCAGCCTCTGTCATGAGAAGGTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGGTTGGAAAGATACAGTaGCAGATCCTTGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWVGKIQ*QILARL
Trigger: CAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAAC...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGATCTGGTTGGCTAGGTaGGAAAGATACAGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWIWLAR*ERYSCR
Trigger: TCTGCAACTGTATCTTTCCAACCTAGCCAACCAGAT...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCAAGTGCAAGCCATGGTaGGGTGTCATTTTTACAGGC +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPKCKPW*GVIFTG
Trigger: GCCTGTAAAAATGACACCCAACCATGGCTTGCACTT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGCTGGCTCCACGTTGTaGGAGAAGGTCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAAGSTL*EKVNIL
Trigger: CAGGATGTTGACCTTCTCCAACAACGTGGAGCCAGC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTTGGCTGGCTCCACGTaGTTGGAGAAGGTCAACATC +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLAGST*LEKVNI
Trigger: GATGTTGACCTTCTCCAACAACGTGGAGCCAGCCAA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCGAACCAGGAAGCCATaGGCTGGCTCCACGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRTRKP*AGSTLL
Trigger: CAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTCG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGCAGGTGGTACAGCTTaGATTGGTCTTGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWAGGTA*IGLVGL
Trigger: CAGCCCAACAAGACCAATCAAAGCTGTACCACCTGC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCAT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGSQLGY*DSVRHH
Trigger: ATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAAAAGGTAGGATCTCTTaGGAAGGCAGGTATTGGCCA +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGKGRIS*EGRYWP
Trigger: TGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCATGAAAGAACAGGGATaGCCAGACCTTCAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGIMKEQG*PDLQGN
Trigger: ATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCAT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TACACTGTTAGCTGCCATACAGAAGGAGGTTCTGGCCTGGTTCTCAGGCCCAGCGTACTCAGTAAGTACTaGTCAAATGAAAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: YTVSCHTEGGSGLVLRPSVLSKY*SNERTG
Trigger: CCCTGTTCTTTCATTTGACAAGTACTTACTGAGTAC...GCTGGGCCTGAGAACCAGGCCAGAACCTCCTTCTGTATGGCAGCTAACAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACTTTCTAGCTGGCTCCTaGGGTTTCAGCTACATTTCT +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYFLAGS*GFSYIS
Trigger: AGAAATGTAGCTGAAACCCAAGGAGCCAGCTAGAAA...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGCTTCCCACCACAGAATaGCATATGTTACAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWLPTTE*HMLQLS
Trigger: ACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAG...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGATTTCAGCACCATCCTaGGACACACAGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWISAPS*DTQPLP
Trigger: GGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAAT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGGAGAATGCTGTAGATTaGCTCCTTGCCATAAATTCT +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLENAVD*LLAINS
Trigger: AGAATTTATGGCAAGGAGCAAATCTACAGCATTCTC...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGAACCTCTCCTGGAGTaGTGGCTCTCCCCATTGGTT +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHEPLLE*WLSPLV
Trigger: AACCAATGGGGAGAGCCACAACTCCAGGAGAGGTTC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCTGGATGAGTGTCCCAAGGGGTTATAGCACCATGAGGAGGCTCAGCCTTCTGTTTTATTCTGTCACCTaGGCTGAGTACTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: VWMSVPRGYSTMRRLSLLFYSVT*AEYFCI
Trigger: GATACAGAAGTACTCAGCCAAGGTGACAGAATAAAA...CAGAAGGCTGAGCCTCCTCATGGTGCTATAACCCCTTGGGACACTCATCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGCACTGTATGTTTCTTaGTGCTTTACCCAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSALYVS*CFTQVL
Trigger: GAGAACTTGGGTAAAGCACAAAGAAACATACAGTGC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp ACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGTCACAGGGTAGACTCCCTTGGCTGAACTaGTCTAACGATAGTCAAAAT +
Preference number: 5 (lower is better)
Translates to: TTAWLEEVASFLPMSQGRLPWLN*SNDSQN
Trigger: ATTTTGACTATCGTTAGACAAGTTCAGCCAAGGGAG...TCTACCCTGTGACATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AGGGGAGAAAGTACCACAGCCTGGTTAGAGGAGGTGGCTTCATTTCTCCCCATGGTCTGGGTGTTTAGTTaGTTCTCTCTTAGCCAAATG +
Preference number: 5 (lower is better)
Translates to: RGESTTAWLEEVASFLPMVWVFS*FSLSQM
Trigger: CATTTGGCTAAGAGAGAACAAACTAAACACCCAGAC...CATGGGGAGAAATGAAGCCACCTCCTCTAACCAGGCTGTGGTACTTTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS GCA 90 bp CTTTCAGGGTTTCATACCCACAAGGAGCTCCCTTGTCTATTCTTCTaGCTCCATACAGGCAGGTGGATGTCTAATCTGTCCATAAAGACC +
Preference number: 5 (lower is better)
Translates to: LSGFHTHKELPCLFF*LHTGRWMSNLSIKT
Trigger: GGTCTTTATGGACAGATTAGACATCCACCTGCCTGTATGGAGGCAGAAGAATAGACAAGGGAGCTCCTTGTGGGTATGAAACCCTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp TCTGTAATACTCTTACTTTCCTGCTCCCTGTTCCCTCTCAATCTGTaGCTGGATGTCCTACCTTTGGGTGTGGTTTCTGAGGCATTAAGG +
Preference number: 5 (lower is better)
Translates to: SVILLLSCSLFPLNL*LDVLPLGVVSEALR
Trigger: CCTTAATGCCTCAGAAACCACACCCAAAGGTAGGACATCCAGCCACAGATTGAGAGGGAACAGGGAGCAGGAAAGTAAGAGTATTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 90 bp CACAAGGAGCTCCCTTGTCTATTCTTCTGCCTCCATACAGGCAGGTaGATGTCTAATCTGTCCATAAAGACCTATGTTGGTAAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HKELPCLFFCLHTGR*MSNLSIKTYVGKLA
Trigger: GGCCAACTTACCAACATAGGTCTTTATGGACAGATTAGACATCCACCTGCCTGTATGGAGGCAGAAGAATAGACAAGGGAGCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCTGTGCGTAGCACTATaGTTGAGTTCCTGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWLCVAL*LSSCEK
Trigger: CTTCTCGCAGGAACTCAACAATAGTGCTACGCACAG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAGAGGACTTCTGGATCTaGCTGAGAGTGGCTGAACCA +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSEDFWI*LRVAEP
Trigger: TGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTC...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATCTCTTCAAGGAGATGTaGTCTGAGTCCAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHLFKEM*SESKAT
Trigger: AGTGGCCTTGGACTCAGACAACATCTCCTTGAAGAG...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTGGCTTGCTTGGTTCTaGGGAGTACTTTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWWLAWF*GVLSGE
Trigger: CTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACTGGCTGAGTTAATATaGAGGATGGGTGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALAELI*RMGAGL
Trigger: CAGTCCGGCACCCATCCTCAATATTAACTCAGCCAG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGTACCTGAGCCCTTTCTaGGGAAGAGTGTTCCGATCC +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWYLSPF*GRVFRS
Trigger: GGATCGGAACACTCTTCCCAAGAAAGGGCTCAGGTA...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTGGGACTCACTATGTaGGTAAGTTGGCCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVGLTM*VSWPFA
Trigger: TGCAAAGGGCCAACTTACCAACATAGTGAGTCCCAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGAGGAGTTTTGTCTCTaGATCCGAAGTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGEEFCL*IRSSLG
Trigger: ACCCAAAGAACTTCGGATCAAGAGACAAAACTCCTC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACTGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTGGCTAGTGATGCTGTaGAGGCTTGAGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: TGLQFSLPVGSTLVFIHCWLVML*RLEMLS
Trigger: AGATAGCATCTCAAGCCTCAACAGCATCACTAGCCA...GCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACATACTGAACGCTTTGTaGAAGGAACTTCGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYILNAL*KELRSQ
Trigger: TTGGCTTCGAAGTTCCTTCAACAAAGCGTTCAGTAT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCTTTATACTGAACGCTTaGTTGAAGGAACTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSFILNA*LKELRS
Trigger: GCTTCGAAGTTCCTTCAACAAAGCGTTCAGTATAAA...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTACAGTTGCAGATCCTaGCAAGACTGCTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHYSCRS*QDCWCM
Trigger: CATGCACCAGCAGTCTTGCAAGGATCTGCAACTGTA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGCTGGCTCCACGTTGTaGGAGAAGGTCAACATCCTG +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKAGSTL*EKVNIL
Trigger: CAGGATGTTGACCTTCTCCAACAACGTGGAGCCAGC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTAGTTGGCAGCTTCTaGAAGTTTCAGCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVVGSF*KFQQHG
Trigger: GCCATGCTGCTGAAACTTCAAGAAGCTGCCAACTAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGGTTGGCAGCCGTCTaGTTGATGTCCCCTATGTCA +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWRLAAV*LMSPMS
Trigger: TGACATAGGGGACATCAACAAGACGGCTGCCAACCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGGCAGCTCTCTACCTTGGCAACTGGTTCCTCTCTCTCCAGCTTCATCTTTTCCGCTGTAAGGTTATTTTaGTGGTTTGGTGACTTCTCA +
Preference number: 5 (lower is better)
Translates to: GQLSTLATGSSLSSFIFSAVRLF*WFGDFS
Trigger: TGAGAAGTCACCAAACCACAAAAATAACCTTACAGC...GGAAAAGATGAAGCTGGAGAGAGAGGAACCAGTTGCCAAGGTAGAGAGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGCAGGTGTCATGCCAATaGCATGGCATCAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWQVSCQ*HGIRFS
Trigger: GGAGAATCTGATGCCATGCAATTGGCATGACACCTG...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCATGAAAGAACAGGGATaGCCAGACCTTCAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPMKEQG*PDLQGN
Trigger: ATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCAT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGCATCTACTCCTCGGTaGGGTGGAAGAGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKASTPR*GGRVIQ
Trigger: CTGGATCACTCTTCCACCCAACCGAGGAGTAGATGC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CCATGGATGCCAAAGATAGTGGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGCCCGGACCATCTTTaGGACTTAATATACCGATAT +
Preference number: 5 (lower is better)
Translates to: PWMPKIVAWQVSCQLHGISPDHL*DLIYRY
Trigger: ATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCT...GATGCCATGCAATTGGCATGACACCTGCCATGCCACTATCTTTGGCATCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACAGCCCGGACCATCTTTaGGACTTAATATACCGATAT +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYSPDHL*DLIYRY
Trigger: ATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCT...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAACCTCTCCTGGAGTaGTGGCTCTCCCCATTGGTT +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWEPLLE*WLSPLV
Trigger: AACCAATGGGGAGAGCCACAACTCCAGGAGAGGTTC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGGACTTGTAGCAGATTaGTCTTCCCTGCCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAGLVAD*SSLPAS
Trigger: AGAGGCTGGCAGGGAAGACAAATCTGCTACAAGTCC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS CCA 90 bp TTAAAGTGTTGCCTGAAGGTTGGGGTCCAGGATGGTTTCTCGATCTaGAGACTCAATGTAGTTGGCAGCTTCTTGAAGTTTCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LKCCLKVGVQDGFSI*RLNVVGSFLKFQQH
Trigger: ATGCTGCTGAAACTTCAAGAAGCTGCCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAGTGAGGAGCTGGCATaGAATTCTTCTGAACTGAGA +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCSEELA*NSSELR
Trigger: TCTCAGTTCAGAAGAATTCAATGCCAGCTCCTCACT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTGCGTAGCACTATTGTaGAGTTCCTGCGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHCVALL*SSCEKQ
Trigger: CTGCTTCTCGCAGGAACTCAACAATAGTGCTACGCA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACTGTGCGTAGCACTATaGTTGAGTTCCTGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALCVAL*LSSCEK
Trigger: CTTCTCGCAGGAACTCAACAATAGTGCTACGCACAG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGACATCTAAGCTAGTCTaGCGCCCATTTACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWTSKLV*RPFTGL
Trigger: CAAGCCAGTAAATGGGCGCAAGACTAGCTTAGATGT...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCACCTGGCTCTGCACTGTaGGAAACATCTAAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSPGSAL*ETSKLV
Trigger: GACTAGCTTAGATGTTTCCAACAGTGCAGAGCCAGG...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATTCCAGACTGTTGGAGTaGACCTTGTCAAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHSRLLE*TLSRLA
Trigger: AGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGA...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCGGTAGATCCAGACTGTaGGAGTTGACCTTGTCAAGA +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGGRSRL*ELTLSR
Trigger: TCTTGACAAGGTCAACTCCAACAGTCTGGATCTACC...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATGTGGGACTCACTATGTaGGTAAGTTGGCCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: THTQTSGPTLASNDLVFYVGLTM*VSWPFA
Trigger: TGCAAAGGGCCAACTTACCAACATAGTGAGTCCCAC...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGTTGATCCGAAGTTCTTaGGGTGTGGTTTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWLIRSS*GVVSEA
Trigger: TGCCTCAGAAACCACACCCAAAGAACTTCGGATCAA...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCATGGCAGGTGTCATGCCAATTGCATGGCATCAGATTCTCCAAAGAAAACCCATACTGAACGCTTTGTaGAAGGAACTTCGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: GMAGVMPIAWHQILQRKPILNAL*KELRSQ
Trigger: TTGGCTTCGAAGTTCCTTCAACAAAGCGTTCAGTAT...GGGTTTTCTTTGGAGAATCTGATGCCATGCAATTGGCATGACACCTGCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAACCTCCAACTGCATGTaGTGCATGGTCTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRTSNCM*CMVSRS
Trigger: GCTTCGGGAGACCATGCACAACATGCAGTTGGAGGT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAATAGTCCTTGAACACTaGGAAAACAGCTTCATCCAG +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGIVLEH*ENSFIQ
Trigger: CTGGATGAAGCTGTTTTCCAAGTGTTCAAGGACTAT...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATGAGACTGATATGTTATaGACACCTCGACGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHETDML*TPRRQG
Trigger: TCCTTGCCGTCGAGGTGTCAATAACATATCAGTCTC...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCATACAGTTGCAGATCCTaGCAAGACTGCTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSYSCRS*QDCWCM
Trigger: CATGCACCAGCAGTCTTGCAAGGATCTGCAACTGTA...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGTTGGAAAGATACAGTaGCAGATCCTTGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCVGKIQ*QILARL
Trigger: CAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAAC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATTGGCTGGCTCCACGTaGTTGGAGAAGGTCAACATC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKLAGST*LEKVNI
Trigger: GATGTTGACCTTCTCCAACAACGTGGAGCCAGCCAA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCGAACCCTTAAAGTGTaGCCTGAAGGTTGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRTLKV*PEGWGP
Trigger: TGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTAACTGCTGCAGTGTTTaGATGTTTTCTGAACCCCTC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCNCCSV*MFSEPL
Trigger: GAGGGGTTCAGAAAACATCAAAACACTGCAGCAGTT...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAGGTTGGCAGCCGTCTaGTTGATGTCCCCTATGTCA +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRLAAV*LMSPMS
Trigger: TGACATAGGGGACATCAACAAGACGGCTGCCAACCT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ACGTGTGCTCTCAAAAGGGAAGTCAAGGGAACTGGGTTCCTCTTCTCCCTCTACGTACTCAGTAAGTACTaGTCAAATGAAAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: TCALKREVKGTGFLFSLYVLSKY*SNERTG
Trigger: CCCTGTTCTTTCATTTGACAAGTACTTACTGAGTAC...GTAGAGGGAGAAGAGGAACCCAGTTCCCTTGACTTCCCTTTTGAGAGCACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTGGCAGGAAGTAGACTaGCCCATTCCTGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHWQEVD*PIPDKQ
Trigger: TTGCTTGTCAGGAATGGGCAAGTCTACTTCCTGCCA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACGCTCATCACATATCCTaGACCTGCAGAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHAHHIS*TCRVLK
Trigger: CTTCAGGACTCTGCAGGTCAAGGATATGTGATGAGC...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTATGTTACAGCTGAGTaGGTTAGGGATCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCYVTAE*VRDLHS
Trigger: GCTGTGAAGATCCCTAACCAACTCAGCTGTAACATA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGATTTCAGCACCATCCTaGGACACACAGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWISAPS*DTQPLP
Trigger: GGGAAGAGGCTGTGTGTCCAAGGATGGTGCTGAAAT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGATATCTTCTTGACCTaGATTTGGAGGACTGAGTCC +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCDIFLT*IWRTES
Trigger: GGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGACATGCAGATATCTTCTaGACCTTGATTTGGAGGACT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGHADIF*TLIWRT
Trigger: AGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATG...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAATCCCATCACAGGGGTaGGCTTATGAAGTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKIPSQG*AYEVGF
Trigger: GAAGCCGACTTCATAAGCCAACCCCTGTGATGGGAT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGCACTGTATGTTTCTTaGTGCTTTACCCAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGALYVS*CFTQVL
Trigger: GAGAACTTGGGTAAAGCACAAAGAAACATACAGTGC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TTCCTAGGAAGTTCTCAAAGGTACAGCACCAAGAACCTGTCCCTCCTCTTTCATAGGAACACCATGCATTaGAGAAACACGGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: FLGSSQRYSTKNLSLLFHRNTMH*RNTDSV
Trigger: GACAGAGTCCGTGTTTCTCAAATGCATGGTGTTCCT...ATGAAAGAGGAGGGACAGGTTCTTGGTGCTGTACCTTTGAGAACTTCCTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AATAATAGTCTCCATCATACAGAACCCTGTCATCCATGGGAGCTTACCACGTGGGTGAGAAAAGAGAGGTaGGTGAGTGACTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NNSLHHTEPCHPWELTTWVRKER*VSDFCL
Trigger: CAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCAC...CCACGTGGTAAGCTCCCATGGATGACAGGGTTCTGTATGATGGAGACTATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCGGAGCCCCTGGTATTaGAGTTTCTCCGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWRSPWY*SFSVKA
Trigger: AGCTTTCACGGAGAAACTCAAATACCAGGGGCTCCG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CAA 90 bp GAAAGCCGAGGCTTCAATACTACCTCACTAGACGGGAACACACTTTCTGGAGGAGTAGTTTATATCTCTTaGGTCTTTTCCTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: ESRGFNTTSLDGNTLSGGVVYIS*VFSWAA
Trigger: AGCTGCCCAGGAAAAGACCAAAGAGATATAAACTAC...TCCTCCAGAAAGTGTGTTCCCGTCTAGTGAGGTAGTATTGAAGCCTCGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS CCA 90 bp GGCATCAGACTCCCATCCATCTTGACTTCTGTAGCAAAGCTTGACTaGTTACTAAACGTCCAGGCTAACTTGCCATTTCAGCACCATATA +
Preference number: 5 (lower is better)
Translates to: GIRLPSILTSVAKLD*LLNVQANLPFQHHI
Trigger: TATATGGTGCTGAAATGGCAAGTTAGCCTGGACGTTTAGTAACCAGTCAAGCTTTGCTACAGAAGTCAAGATGGATGGGAGTCTGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTCTTCTGAACTGAGATaGTCTGAGGCATCGCTGAGT +
Preference number: 5 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGISSELR*SEASLS
Trigger: ACTCAGCGATGCCTCAGACAATCTCAGTTCAGAAGA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCTTCTGAACTGAGATaGTCTGAGGCATCGCTGAGT +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASSELR*SEASLS
Trigger: ACTCAGCGATGCCTCAGACAATCTCAGTTCAGAAGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTCAGTTCTCCACCCTaGGATGAATCATCACAGCTC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHFSSPP*DESSQL
Trigger: GAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATTCAGTTCTCCACCCTaGGATGAATCATCACAGCTC +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAFSSPP*DESSQL
Trigger: GAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGACTGCAAGCTTACCCTaGTCTGTAGCTTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWTASLP*SVALPS
Trigger: TGAGGGCAAAGCTACAGACAAGGGTAAGCTTGCAGT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGCTCTTCAAGGAGATGTaGTCTGAGTCCAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWLFKEM*SESKAT
Trigger: AGTGGCCTTGGACTCAGACAACATCTCCTTGAAGAG...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACTGTTGGAGTTGACCTaGTCAAGATTGGCTAGTGAG +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDALLELT*SRLASE
Trigger: CTCACTAGCCAATCTTGACAAGGTCAACTCCAACAG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCCAGACTGTTGGAGTaGACCTTGTCAAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASRLLE*TLSRLA
Trigger: AGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACTGGCTGAGTTAATATaGAGGATGGGTGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRLAELI*RMGAGL
Trigger: CAGTCCGGCACCCATCCTCAATATTAACTCAGCCAG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTGGCTAGTGATGCTGTaGAGGCTTGAGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHWLVML*RLEMLS
Trigger: AGATAGCATCTCAAGCCTCAACAGCATCACTAGCCA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAGAGACTGATATGTTATaGACACCTCGACGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAETDML*TPRRQG
Trigger: TCCTTGCCGTCGAGGTGTCAATAACATATCAGTCTC...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCCCGGTCTATCTGGTaGGCTAGGTTGGAAAGATAC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSRSIW*ARLERY
Trigger: GTATCTTTCCAACCTAGCCAACCAGATAGACCGGGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTAAGTGCAAGCCATGGTaGGGTGTCATTTTTACAGGC +
Preference number: 5 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIKCKPW*GVIFTG
Trigger: GCCTGTAAAAATGACACCCAACCATGGCTTGCACTT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCATCTTCCTTGTTGGCATaGATGTCGCTGTCTGACTCT +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDASSLLA*MSLSDS
Trigger: AGAGTCAGACAGCGACATCAATGCCAACAAGGAAGA...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCAT +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWSQLGY*DSVRHH
Trigger: ATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGAAAGGTAGGATCTCTTaGGAAGGCAGGTATTGGCCA +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWKGRIS*EGRYWP
Trigger: TGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTT...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCATGAAAGAACAGGGATaGCCAGACCTTCAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGMKEQG*PDLQGN
Trigger: ATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCAT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATGGCAGGAAGTAGACTaGCCCATTCCTGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKWQEVD*PIPDKQ
Trigger: TTGCTTGTCAGGAATGGGCAAGTCTACTTCCTGCCA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CGTGGATTGCCGGGTCCTCTCATTAGAGTTTCTGATTCAGCAGATCTGGGATGGATATGGATAGATCAGTaGGAAAGTTGGCAATTCAAG +
Preference number: 5 (lower is better)
Translates to: RGLPGPLIRVSDSADLGWIWIDQ*ESWQFK
Trigger: CTTGAATTGCCAACTTTCCAACTGATCTATCCATAT...CCATCCCAGATCTGCTGAATCAGAAACTCTAATGAGAGGACCCGGCAATCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTCAGGCTTTGGCCTTaGGGGAACAGTGTTCATAAG +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHFRLWP*GNSVHK
Trigger: CTTATGAACACTGTTCCCCAAAGGCCAAAGCCTGAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp ACACACACGCAGACATCAGGTCCCACATTAGCCTCCAATGACCTAGTATTTTATCAATATCTTCAGGCTTaGGCCTTTGGGGAACAGTGT +
Preference number: 5 (lower is better)
Translates to: THTQTSGPTLASNDLVFYQYLQA*AFGEQC
Trigger: ACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTG...ATAAAATACTAGGTCATTGGAGGCTAATGTGGGACCTGATGTCTGCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGTCTTGTGCCATACTTaGCGAACCACTGCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWVLCHT*RTTALR
Trigger: CCTTAAAGCAGTGGTTCGCAAAGTATGGCACAAGAC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCGACTATCTGAGCAAGTaGGTGACCCTAGCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: WELGFSVVSWSLDRILMTDYLSK*VTLARS
Trigger: ACTTCTTGCTAGGGTCACCAACTTGCTCAGATAGTC...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATTCAGTTCTCCACCCTaGGATGAATCATCACAGCTC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKFSSPP*DESSQL
Trigger: GAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGACATCTAAGCTAGTCTaGCGCCCATTTACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWTSKLV*RPFTGL
Trigger: CAAGCCAGTAAATGGGCGCAAGACTAGCTTAGATGT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGACCTGGCTCTGCACTGTaGGAAACATCTAAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRPGSAL*ETSKLV
Trigger: GACTAGCTTAGATGTTTCCAACAGTGCAGAGCCAGG...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGGTAGATCCAGACTGTaGGAGTTGACCTTGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWGRSRL*ELTLSR
Trigger: TCTTGACAAGGTCAACTCCAACAGTCTGGATCTACC...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAGGAGTTTTGTCTCTaGATCCGAAGTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHEEFCL*IRSSLG
Trigger: ACCCAAAGAACTTCGGATCAAGAGACAAAACTCCTC...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAATCTGGTTGGCTAGGTaGGAAAGATACAGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSIWLAR*ERYSCR
Trigger: TCTGCAACTGTATCTTTCCAACCTAGCCAACCAGAT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCAATCTGGTTGGCTAGGTaGGAAAGATACAGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAIWLAR*ERYSCR
Trigger: TCTGCAACTGTATCTTTCCAACCTAGCCAACCAGAT...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAAGCAGCTCTTCCTTGTaGGCATTGATGTCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRSSSSL*ALMSLS
Trigger: AGACAGCGACATCAATGCCAACAAGGAAGAGCTGCT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGCTGTAAGGTTATTTTaGTGGTTTGGTGACTTCTCA +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCAVRLF*WFGDFS
Trigger: TGAGAAGTCACCAAACCACAAAAATAACCTTACAGC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAAGCCAGCTAGGATATTaGGATTCAGTCAGGCACCAT +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSQLGY*DSVRHH
Trigger: ATGGTGCCTGACTGAATCCAAATATCCTAGCTGGCT...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AGTAAGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGAAAGGTAGGATCTCTTaGGAAGGCAGGTATTGGCCA +
Preference number: 5 (lower is better)
Translates to: SKYLSNERTGIARPSRQWKGRIS*EGRYWP
Trigger: TGGCCAATACCTGCCTTCCAAAGAGATCCTACCTTT...CCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACCTTCCCACCACAGAATaGCATATGTTACAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHLPTTE*HMLQLS
Trigger: ACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAG...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTGAGAATGCTGTAGATTaGCTCCTTGCCATAAATTCT +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCENAVD*LLAINS
Trigger: AGAATTTATGGCAAGGAGCAAATCTACAGCATTCTC...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CTGGTTTTCCTCTGGTCCATGATAAAGCTCGGAGTAACTCTTCTATCAAGATGGGATATCTTCTTGACCTaGATTTGGAGGACTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LVFLWSMIKLGVTLLSRWDIFLT*IWRTES
Trigger: GGACTCAGTCCTCCAAATCAAGGTCAAGAAGATATC...CCATCTTGATAGAAGAGTTACTCCGAGCTTTATCATGGACCAGAGGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATCCAACTGCTTTTCCTaGTTGAAGCCCCTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKSNCFS*LKPLCV
Trigger: CACACAAAGGGGCTTCAACAAGGAAAAGCAGTTGGA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AACTGTGATTCCTTCATGAGAATGATCAATCCCCACAGTGAGGGGCCCAGATGTTGCTGGGAGAACACGTaGTCATGGAAATACAAATTA +
Preference number: 5 (lower is better)
Translates to: NCDSFMRMINPHSEGPRCCWENT*SWKYKL
Trigger: TAATTTGTATTTCCATGACAACGTGTTCTCCCAGCA...ACATCTGGGCCCCTCACTGTGGGGATTGATCATTCTCATGAAGGAATCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCTATGGTAGCTCTGCCTaGATATCATCTTCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGYGSSA*ISSSCL
Trigger: AAGACACGAAGATGATATCAAGGCAGAGCTACCATA...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAAGGTTTCTGGTCAGTTaGCAACCTGTACTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRRFLVS*QPVLEG
Trigger: CCCTTCCAGTACAGGTTGCAAACTGACCAGAAACCT...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS-3UTR CAA 90 bp TGGCTTACAATTCTCCCTCCCTGTTGGGTCAACTCTAGTTTTCATCCACTGCTCAACCTGAATTTCAGATaGTTTCTACCATCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: WLTILPPCWVNSSFHPLLNLNFR*FLPSAQ
Trigger: TTGGGCAGATGGTAGAAACAATCTGAAATTCAGGTT...GAGCAGTGGATGAAAACTAGAGTTGACCCAACAGGGAGGGAGAATTGTAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAACAACTTTTGTGCAAACACTaGGAAAGCTCCTGCAGATCC +
Preference number: 5 (lower is better)
Translates to: RQNSNDQSCACTVTWHEQLLCKH*ESSCRS
Trigger: GGATCTGCAGGAGCTTTCCAAGTGTTTGCACAAAAG...TTGTTCATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp GTCACTAGACAGAATTCTAATGACCAATCATGTGCCTGCACAGTTACGTGGCATGAGGCTCCTGGAGACTaGAGATCTAAAACCTATCAA +
Preference number: 5 (lower is better)
Translates to: VTRQNSNDQSCACTVTWHEAPGD*RSKTYQ
Trigger: TTGATAGGTTTTAGATCTCAAGTCTCCAGGAGCCTC...ATGCCACGTAACTGTGCAGGCACATGATTGGTCATTAGAATTCTGTCTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATTTCTAGCTGGCTCCTaGGGTTTCAGCTACATTTCT +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKFLAGS*GFSYIS
Trigger: AGAAATGTAGCTGAAACCCAAGGAGCCAGCTAGAAA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAAGCCCGGACCATCTTTaGGACTTAATATACCGATAT +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSSPDHL*DLIYRY
Trigger: ATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp GGCAGCCCGGACCATCTTTTGGACTTAATATACCGATATGAAGATTCAGATGCACATGCAGATATCTTCTaGACCTTGATTTGGAGGACT +
Preference number: 5 (lower is better)
Translates to: GSPDHLLDLIYRYEDSDAHADIF*TLIWRT
Trigger: AGTCCTCCAAATCAAGGTCAAGAAGATATCTGCATG...TGCATCTGAATCTTCATATCGGTATATTAAGTCCAAAAGATGGTCCGGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTATACTGAACGCTTTGTaGAAGGAACTTCGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIILNAL*KELRSS
Trigger: TGAGCTTCGAAGTTCCTTCAACAAAGCGTTCAGTAT...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTTTATACTGAACGCTTaGTTGAAGGAACTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGIFILNA*LKELRS
Trigger: GCTTCGAAGTTCCTTCAACAAAGCGTTCAGTATAAA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGGCTCTCCCCATTGGTaGACATTAGATATTGAATTC +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKGSPHW*TLDIEF
Trigger: GAATTCAATATCTAATGTCAACCAATGGGGAGAGCC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp CAGCTAGGATATTTGGATTCAGTCAGGCACCATCAGAATAGTGCAGTGAAAGGCATTGGACAAAACTTGTaGGTCTTCTTCATCCAGAAA +
Preference number: 5 (lower is better)
Translates to: QLGYLDSVRHHQNSAVKGIGQNL*VFFIQK
Trigger: TTTCTGGATGAAGAAGACCAACAAGTTTTGTCCAAT...GCCTTTCACTGCACTATTCTGATGGTGCCTGACTGAATCCAAATATCCTAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGATGCAGCTTTGGCATTTaGATAGGTATCCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRCSFGI*IGILPS
Trigger: TGAAGGGAGGATACCTATCAAAATGCCAAAGCTGCA...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTATACACAGGTTGAATTTTCAACCGTCTTCGTGTCCCTGCAGCTTTGGCATTTGCTGGGAGAACACGTaGTCATGGAAATACAAATTA +
Preference number: 5 (lower is better)
Translates to: SIHRLNFQPSSCPCSFGICWENT*SWKYKL
Trigger: TAATTTGTATTTCCATGACAACGTGTTCTCCCAGCA...AATGCCAAAGCTGCAGGGACACGAAGACGGTTGAAAATTCAACCTGTGTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACTTTTATTCTGTCACCTaGGCTGAGTACTTCTGTATC +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHFYSVT*AEYFCI
Trigger: GATACAGAAGTACTCAGCCAAGGTGACAGAATAAAA...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAATATGGTAGCTCTGCCTaGATATCATCTTCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKYGSSA*ISSSCL
Trigger: AAGACACGAAGATGATATCAAGGCAGAGCTACCATA...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TGGGAGTTAGGTTTCTCAGTAGTGTCGTGGTCACTAGACAGAATTCTAATGACCGGTACAACTTATGAATaGAGGGTTTGGGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: WELGFSVVSWSLDRILMTGTTYE*RVWEKR
Trigger: TCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACC...GGTCATTAGAATTCTGTCTAGTGACCACGACACTACTGAGAAACCTAACTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS-3UTR CAA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGGCAACATCTGTCTTCTaGACCTCAGGTCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: FKQTGTTYELRVWEKRIEATSVF*TSGLLW
Trigger: CCAGAGAAGACCTGAGGTCAAGAAGACAGATGTTGC...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 90 bp GGTGACAGAAGCATAATTATAGTGGGGTTAGGTGTGAAAGGGAGGTaGAAATGTAGGATCGACTGGAGGAAGCAAAGAAATAAGATTATA +
Preference number: 5 (lower is better)
Translates to: GDRSIIIVGLGVKGR*KCRIDWRKQRNKII
Trigger: TATAATCTTATTTCTTTGCTTCCTCCAGTCGATCCTACATTTCCACCTCCCTTTCACACCTAACCCCACTATAATTATGCTTCTGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS-3UTR CAA 90 bp AGTACTTGTCAAATGAAAGAACAGGGATTGCCAGACCTTCAAGGCAATGGGAAAGAGAATGCTGTAGATTaGCTCCTTGCCATAAATTCT +
Preference number: 5 (lower is better)
Translates to: STCQMKEQGLPDLQGNGKENAVD*LLAINS
Trigger: AGAATTTATGGCAAGGAGCAAATCTACAGCATTCTC...TTTCCCATTGCCTTGAAGGTCTGGCAATCCCTGTTCTTTCATTTGACAAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp ATCAACCTGCTGAGGATCCAAATAAAATTCATGGTGGTATCCATGGTTACCAGAGGCTCTCCCCATTGGTaGACATTAGATATTGAATTC +
Preference number: 5 (lower is better)
Translates to: INLLRIQIKFMVVSMVTRGSPHW*TLDIEF
Trigger: GAATTCAATATCTAATGTCAACCAATGGGGAGAGCC...TCTGGTAACCATGGATACCACCATGAATTTTATTTGGATCCTCAGCAGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TCTTCCCACCACAGAATTGCATATGTTACAGCTGAGTTGGTTAGGGATCTTCACATTGGACAAAACTTGTaGGTCTTCTTCATCCAGAAA +
Preference number: 5 (lower is better)
Translates to: SSHHRIAYVTAELVRDLHIGQNL*VFFIQK
Trigger: TTTCTGGATGAAGAAGACCAACAAGTTTTGTCCAAT...GTGAAGATCCCTAACCAACTCAGCTGTAACATATGCAATTCTGTGGTGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS-3UTR CAA 90 bp TTGGATTATAAGGGGCAATATCTTCAGGCTTTGGCCTTTGGGGAACAGTGTTCAATATGGATAGATCAGTaGGAAAGTTGGCAATTCAAG +
Preference number: 5 (lower is better)
Translates to: LDYKGQYLQALAFGEQCSIWIDQ*ESWQFK
Trigger: CTTGAATTGCCAACTTTCCAACTGATCTATCCATAT...TGAACACTGTTCCCCAAAGGCCAAAGCCTGAAGATATTGCCCCTTATAATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367295.5
ENST00000367296.8
CDS-3UTR CAA 90 bp TTCAAACAAACTGGTACAACTTATGAATTGAGGGTTTGGGAAAAGAGAATCGAGGGAATTCTGCAAAACTaGATAGAGAAGGGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: FKQTGTTYELRVWEKRIEGILQN*IEKGKE
Trigger: TTCCTTGCCCTTCTCTATCAAGTTTTGCAGAATTCC...CTCGATTCTCTTTTCCCAAACCCTCAATTCATAAGTTGTACCAGTTTGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS TCA 90 bp GGGGATGACTTTAATTTTGGACATATTAAGTTAGAGATATCTCTATaGGGTCAACTAAGTGGAAACATCCAAACGTGGTTGGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: GDDFNFGHIKLEISL*GQLSGNIQTWLEVK
Trigger: CTTTACTTCCAACCACGTTTGGATGTTTCCACTTAGTTGACCTCATAGAGATATCTCTAACTTAATATGTCCAAAATTAAAGTCATCCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS TCA 90 bp GTAAGGAAATTATTGAAATATTCTAGGAGAAGAATGATAAAAACCTaGGCCAGGGTAGTGACAATACAGAAGAGGGATAGAATTGAGATC +
Preference number: 5 (lower is better)
Translates to: VRKLLKYSRRRMIKT*ARVVTIQKRDRIEI
Trigger: GATCTCAATTCTATCCCTCTTCTGTATTGTCACTACCCTGGCTCAGGTTTTTATCATTCTTCTCCTAGAATATTTCAATAATTTCCTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS GCA 72 bp GGCGCGCTTGGGCAGCATGCCTCTGCCGTCCGCCGCTaGCGCCTTCCTGCCGGCGCCCCGCGGTTCGTCCGC +
Preference number: 6 (lower is better)
Translates to: GALGQHASAVRR*RLPAGAPRFVR
Trigger: GCGGACGAACCGCGGGGCGCCGGCAGGAAGGCGGCAGCGGCGGACGGCAGAGGCATGCTGCCCAAGCGCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp TCCACGCTGCCGGACTTGAAGACCTTCAGCTCAGCCGCGCTGGCCTaGGCCATGCCGCCGCCGCCGCCGGGCGCCTTGGCGCGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: STLPDLKTFSSAALA*AMPPPPPGALARLG
Trigger: GCCCAAGCGCGCCAAGGCGCCCGGCGGCGGCGGCGGCATGGCCAAGGCCAGCGCGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp GAGGCGGGCGGCCCGCCGGGGACACGGCTGTCCACGCTGCCGGACTaGAAGACCTTCAGCTCAGCCGCGCTGGCCTTGGCCATGCCGCCG +
Preference number: 6 (lower is better)
Translates to: EAGGPPGTRLSTLPD*KTFSSAALALAMPP
Trigger: CGGCGGCATGGCCAAGGCCAGCGCGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGACAGCCGTGTCCCCGGCGGGCCGCCCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp GGATGGAAGCCCCGCGGCTCCTCCGGCGCCCAGCGGTaGTTTTGCTTTGGTGTCCGGATCCCAGCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: GWKPRGSSGAQR*FCFGVRIPARG
Trigger: GCCGCGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGAGGAGCCGCGGGGCTTCCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS CCA 72 bp ACCGAAGCCTCCTCCGTTCCGGTGGCCTCGGAAGCCTaGAGGTGCCGACGGGGCTGGGGGCTCGACCTCCAC +
Preference number: 6 (lower is better)
Translates to: TEASSVPVASEA*RCRRGWGLDLH
Trigger: GTGGAGGTCGAGCCCCCAGCCCCGTCGGCACCTCCAGGCTTCCGAGGCCACCGGAACGGAGGAGGCTTCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CAA 72 bp GGCCCGCCGGGGACACGGCTGTCCACGCTGCCGGACTaGAAGACCTTCAGCTCAGCCGCGCTGGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: GPPGTRLSTLPD*KTFSSAALALA
Trigger: GGCCAAGGCCAGCGCGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGACAGCCGTGTCCCCGGCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp GATGGAAGCCCCGCGGCTCCTCCGGCGCCCAGCGGTGCTTTTGCTTaGGTGTCCGGATCCCAGCCCGCGGCCTGCCTGCCTGTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: DGSPAAPPAPSGAFA*VSGSQPAACLPVSP
Trigger: GGGACTGACAGGCAGGCAGGCCGCGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGAGGAGCCGCGGGGCTTCCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS TCA 72 bp GCCCGCCGGGGACACGGCTGTCCACGCTGCCGGACTTaGAGACCTTCAGCTCAGCCGCGCTGGCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: ARRGHGCPRCRT*RPSAQPRWPWP
Trigger: TGGCCAAGGCCAGCGCGGCTGAGCTGAAGGTCTTCAAGTCCGGCAGCGTGGACAGCCGTGTCCCCGGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp GGAAGGATGGAAGCCCCGCGGCTCCTCCGGCGCCCAGCGGTGCTTTaGCTTTGGTGTCCGGATCCCAGCCCGCGGCCTGCCTGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: GRMEAPRLLRRPAVL*LWCPDPSPRPACLS
Trigger: TGACAGGCAGGCAGGCCGCGGGCTGGGATCCGGACACCAAAGCAAAAGCACCGCTGGGCGCCGGAGGAGCCGCGGGGCTTCCATCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367296.8
CDS CAA 90 bp TGCTCCAGGTCTCCCAGCACGGTCACCACCAGCTCGGGGTCCACCTaGAGGAAGGCGCGCTCCTCCTGGCCCTTGGCAGAGGGGACAGGC +
Preference number: 6 (lower is better)
Translates to: CSRSPSTVTTSSGST*RKARSSWPLAEGTG
Trigger: GCCTGTCCCCTCTGCCAAGGGCCAGGAGGAGCGCGCCTTCCTCAAGGTGGACCCCGAGCTGGTGGTGACCGTGCTGGGAGACCTGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp CTCCCAGCACGGTCACCACCAGCTCGGGGTCCACCTTaGGGAAGGCGCGCTCCTCCTGGCCCTTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LPARSPPARGPP*GRRAPPGPWQR
Trigger: CCTCTGCCAAGGGCCAGGAGGAGCGCGCCTTCCTCAAGGTGGACCCCGAGCTGGTGGTGACCGTGCTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp CCGGAGAGGGAGAGGGGCGCTTGCCCTGCACTGGGCTaGAGACTGGAGAGGAAGCCCACGAAGCTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: PERERGACPALG*RLERKPTKLPP
Trigger: AGGGGGCAGCTTCGTGGGCTTCCTCTCCAGTCTGCAGCCCAGTGCAGGGCAAGCGCCCCTCTCCCTCTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CCA 72 bp CCACAGAGGGCGCGTCACCAGCCTGCAGCCGCGGACTaGACTGGCCATAGCGCCATGACAGAGGGGACGAGC +
Preference number: 6 (lower is better)
Translates to: PQRARHQPAAAD*TGHSAMTEGTS
Trigger: GCTCGTCCCCTCTGTCATGGCGCTATGGCCAGTCCAGTCCGCGGCTGCAGGCTGGTGACGCGCCCTCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp CCGCCCGCCGGGCTGCCCTTGGCCTGGAAGAGCGAGTGCTCCGACTaGGACAGCGTCTTGGACATCAGCGGAGCTTCACGGCCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: PPAGLPLAWKSECSD*DSVLDISGASRPLD
Trigger: GTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGCCAAGGGCAGCCCGGCGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp GTAGACAAAGAGCCACCGAAGCCTCCTCCGTTCCGGTaGCCTCGGAAGCCTGGAGGTGCCGACGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VDKEPPKPPPFR*PRKPGGADGAG
Trigger: CCCAGCCCCGTCGGCACCTCCAGGCTTCCGAGGCCACCGGAACGGAGGAGGCTTCGGTGGCTCTTTGTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CAA 90 bp GGGCGAGGTCCACCCCGCCCGCCGGTCACGCTCATAGAACTTGACTaGGCTGGCCGGGGCAGGCTGCGGTACTGGATGTTAGAACGGGCT +
Preference number: 6 (lower is better)
Translates to: GRGPPRPPVTLIELD*AGRGRLRYWMLERA
Trigger: AGCCCGTTCTAACATCCAGTACCGCAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTGACCGGCGGGCGGGGTGGACCTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 90 bp TCCGTGAGAAAAGAGAGGTTGGTGAGTGACTTCTGCTTGCGCAGGTaGGAGGCGGGCGGCCCGCCGGGGACACGGCTGTCCACGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SVRKERLVSDFCLRR*EAGGPPGTRLSTLP
Trigger: CGGCAGCGTGGACAGCCGTGTCCCCGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp AGGTCCACCCCGCCCGCCGGTCACGCTCATAGAACTTaGCTTGGCTGGCCGGGGCAGGCTGCGGTACTGGAT +
Preference number: 6 (lower is better)
Translates to: RSTPPAGHAHRT*LGWPGQAAVLD
Trigger: ATCCAGTACCGCAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTGACCGGCGGGCGGGGTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 72 bp AGCCTGCAGCCGCGGACTGGACTGGCCATAGCGCCATaGCAGAGGGGACGAGCGGTTGGAGAGGCTGGACAC +
Preference number: 6 (lower is better)
Translates to: SLQPRTGLAIAP*QRGRAVGEAGH
Trigger: GTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAGTCCAGTCCGCGGCTGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp TGCCAGCTGTGGTCCCTTGGGCGCTCTTACTCGCGCTaGACTGGCAGGAGGGGGTGTGAGCAGCGAGCCACT +
Preference number: 6 (lower is better)
Translates to: CQLWSLGRSYSR*TGRRGCEQRAT
Trigger: AGTGGCTCGCTGCTCACACCCCCTCCTGCCAGTGCAGCGCGAGTAAGAGCGCCCAAGGGACCACAGCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS GCA 72 bp TTCCCCGCCGCTGACTTCTGTCCCGAGCCCCGGCGATaGAGGCTGCGAGCGGGCTCTTTAACACCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: FPAADFCPEPRR*RLRAGSLTPRA
Trigger: TGCTCTGGGTGTTAAAGAGCCCGCTCGCAGCCTGCATCGCCGGGGCTCGGGACAGAAGTCAGCGGCGGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CCA 72 bp ACGCTGCTGCCCAGCATTCTGCCCGCGAGGAGCGCATaGACGATCCGCGCGTCCATGCAGGAGAAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: TLLPSILPARSA*TIRASMQEKLS
Trigger: GGAGAGCTTCTCCTGCATGGACGCGCGGATCGTCCATGCGCTCCTCGCGGGCAGAATGCTGGGCAGCAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367302.5
CDS CCA 72 bp GAATCCTGGTCTGGGAAGAGGCACGAGGCACCGGGATaGCGGAGGCGTAGTGAGGGCGGCTGGCGGGATTCA +
Preference number: 6 (lower is better)
Translates to: ESWSGKRHEAPG*RRRSEGGWRDS
Trigger: TGAATCCCGCCAGCCGCCCTCACTACGCCTCCGCCATCCCGGTGCCTCGTGCCTCTTCCCAGACCAGGATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593583.1
CDS CAA 90 bp GAGCCGCTGTACAGCTCGAAGGCCGCCTCGTGGGTGGGGATGCTGTaGGAGCGGGTGATTCTTGGCGTGGTGGCCGCAGTGGGACTCACT +
Preference number: 6 (lower is better)
Translates to: EPLYSSKAASWVGML*ERVILGVVAAVGLT
Trigger: AGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGCTGTACAGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 72 bp AGGCCGCCTCGTGGGTGGGGATGCTGTTGGAGCGGGTaGTTCTTGGCGTGGTGGCCGCAGTGGGACTCACTA +
Preference number: 6 (lower is better)
Translates to: RPPRGWGCCWSG*FLAWWPQWDSL
Trigger: TAGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAGGCGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 72 bp CCAGGGATTCGACCAGCTCCAGGCGGGAGATATGGCTaGGCTTGCTGGGGCTGCGCATGGGCATGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: PGIRPAPGGRYG*ACWGCAWAWCG
Trigger: CCCACACCATGCCCATGCGCAGCCCCAGCAAGCTCAGCCATATCTCCCGCCTGGAGCTGGTCGAATCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp GAGTCCGTGAGAAAAGAGAGGTTGGTGAGTGACTTCTaGTTGCGCAGGTTGGAGGCGGGCGGCCCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: ESVRKERLVSDF*LRRLEAGGPPG
Trigger: CCCCGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCACGGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp CACTGGGCTGCAGACTGGAGAGGAAGCCCACGAAGCTaGCCCCTCATCAGGCTCCAAAGACCTGGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: HWAADWRGSPRS*PLIRLQRPGGP
Trigger: GGGACCCCCAGGTCTTTGGAGCCTGATGAGGGGGCAGCTTCGTGGGCTTCCTCTCCAGTCTGCAGCCCAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CAA 72 bp CCACCCCGCCCGCCGGTCACGCTCATAGAACTTGACTaGGCTGGCCGGGGCAGGCTGCGGTACTGGATGTTA +
Preference number: 6 (lower is better)
Translates to: PPRPPVTLIELD*AGRGRLRYWML
Trigger: TAACATCCAGTACCGCAGCCTGCCCCGGCCAGCCAAGTCAAGTTCTATGAGCGTGACCGGCGGGCGGGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 90 bp TTCTCGGAGTCCGTGAGAAAAGAGAGGTTGGTGAGTGACTTCTGCTaGCGCAGGTTGGAGGCGGGCGGCCCGCCGGGGACACGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: FSESVRKERLVSDFC*RRLEAGGPPGTRLS
Trigger: GGACAGCCGTGTCCCCGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCACGGACTCCGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp CTGGGCTGCTCCGAAATTAACCCCTGGGATGCCAGCTGTGGTCCCTaGGGCGCTCTTACTCGCGCTGCACTGGCAGGAGGGGGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: LGCSEINPWDASCGP*GALTRAALAGGGVS
Trigger: GCTCACACCCCCTCCTGCCAGTGCAGCGCGAGTAAGAGCGCCCAAGGGACCACAGCTGGCATCCCAGGGGTTAATTTCGGAGCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS TCA 72 bp TGGGGTGCTGTCTTTGACTGTCCTATCCTCGGGAGGTaGGGCAATGCTGTGAGGGCCCACGGTGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: WGAVFDCPILGR*GNAVRAHGGWG
Trigger: CCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp CCTTGGCCTTGCTGGAGAGCAGCTCGTCGTCCGATTTaGCATCTTCGCTCACGGCCGCTTCAGGCGCCTTGC +
Preference number: 6 (lower is better)
Translates to: PWPCWRAARRPI*HLRSRPLQAPC
Trigger: GCAAGGCGCCTGAAGCGGCCGTGAGCGAAGATGGCAAATCGGACGACGAGCTGCTCTCCAGCAAGGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp AGCGCCATGACAGAGGGGACGAGCGGTTGGAGAGGCTaGACACGCTGCGTGGGTTGGCATCATCGCTGTCGT +
Preference number: 6 (lower is better)
Translates to: SAMTEGTSGWRG*TRCVGWHHRCR
Trigger: ACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGTCATGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp CCGAAATTAACCCCTGGGATGCCAGCTGTGGTCCCTTaGGCGCTCTTACTCGCGCTGCACTGGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PKLTPGMPAVVP*ALLLALHWQEG
Trigger: CCCCTCCTGCCAGTGCAGCGCGAGTAAGAGCGCCCAAGGGACCACAGCTGGCATCCCAGGGGTTAATTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CAA 72 bp TCCGTGAGAAAAGAGAGGTTGGTGAGTGACTTCTGCTaGCGCAGGTTGGAGGCGGGCGGCCCGCCGGGGACA +
Preference number: 6 (lower is better)
Translates to: SVRKERLVSDFC*RRLEAGGPPGT
Trigger: TGTCCCCGGCGGGCCGCCCGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp GCTTCACGGCCCTTGGACCCCACCTTGCCTAAGCCTTaGGGCGCCTTGGCCATATCGTCGCTCCATTCGGGC +
Preference number: 6 (lower is better)
Translates to: ASRPLDPTLPKP*GALAISSLHSG
Trigger: GCCCGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp GCCTGGAAGAGCGAGTGCTCCGACTTGGACAGCGTCTaGGACATCAGCGGAGCTTCACGGCCCTTGGACCCC +
Preference number: 6 (lower is better)
Translates to: AWKSECSDLDSV*DISGASRPLDP
Trigger: GGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp GGGCTGCCCTTGGCCTGGAAGAGCGAGTGCTCCGACTaGGACAGCGTCTTGGACATCAGCGGAGCTTCACGG +
Preference number: 6 (lower is better)
Translates to: GLPLAWKSECSD*DSVLDISGASR
Trigger: CCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGCCAAGGGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp GCCTTGGCCTTGCTGGAGAGCAGCTCGTCGTCCGATTaGCCATCTTCGCTCACGGCCGCTTCAGGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: ALALLESSSSSD*PSSLTAASGAL
Trigger: CAAGGCGCCTGAAGCGGCCGTGAGCGAAGATGGCAAATCGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp CTGCCCTTGGCCTGGAAGAGCGAGTGCTCCGACTTGGACAGCGTCTaGGACATCAGCGGAGCTTCACGGCCCTTGGACCCCACCTTGCCT +
Preference number: 6 (lower is better)
Translates to: LPLAWKSECSDLDSV*DISGASRPLDPTLP
Trigger: AGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGGCCAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp CTCTTTTGCGCCTTGGCCTTGCTGGAGAGCAGCTCGTCGTCCGATTaGCCATCTTCGCTCACGGCCGCTTCAGGCGCCTTGCTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: LFCALALLESSSSSD*PSSLTAASGALLSG
Trigger: GCCGCTCAGCAAGGCGCCTGAAGCGGCCGTGAGCGAAGATGGCAAATCGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp ACATCAGCGGAGCTTCACGGCCCTTGGACCCCACCTTaGCTAAGCCTTTGGGCGCCTTGGCCATATCGTCGC +
Preference number: 6 (lower is better)
Translates to: TSAELHGPWTPP*LSLWAPWPYRR
Trigger: GCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp ACAGAGGGGACGAGCGGTTGGAGAGGCTGGACACGCTaGGTGGGTTGGCATCATCGCTGTCGTAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: TEGTSGWRGWTR*VGWHHRCRSRS
Trigger: TGACCTGCTACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp GAGTTTCTCCGTGAAAGCTCGTCCGAGAAGGGCTTCTaGCCCGGGTCTGGCAGACTGGAGTCCCTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: EFLRESSSEKGF*PGSGRLESLPG
Trigger: CCCAGGAAGGGACTCCAGTCTGCCAGACCCGGGGCAGAAGCCCTTCTCGGACGAGCTTTCACGGAGAAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367302.5
ENST00000593583.1
CDS CCA 72 bp CTTCACGGCCCTTGGACCCCACCTTGCCTAAGCCTTTaGGCGCCTTGGCCATATCGTCGCTCCATTCGGGCT +
Preference number: 6 (lower is better)
Translates to: LHGPWTPPCLSL*APWPYRRSIRA
Trigger: AGCCCGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp ACAGCGTCTTGGACATCAGCGGAGCTTCACGGCCCTTaGACCCCACCTTGCCTAAGCCTTTGGGCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: TASWTSAELHGP*TPPCLSLWAPW
Trigger: CCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp CCTGGAAGAGCGAGTGCTCCGACTTGGACAGCGTCTTaGACATCAGCGGAGCTTCACGGCCCTTGGACCCCA +
Preference number: 6 (lower is better)
Translates to: PGRASAPTWTAS*TSAELHGPWTP
Trigger: TGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGAGCACTCGCTCTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp ACGAGCGGTTGGAGAGGCTGGACACGCTGCGTGGGTTaGCATCATCGCTGTCGTAGCAGGTCATCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: TSGWRGWTRCVG*HHRCRSRSSPG
Trigger: CCCTGGAGATGACCTGCTACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp AGGGGACGAGCGGTTGGAGAGGCTGGACACGCTGCGTaGGTTGGCATCATCGCTGTCGTAGCAGGTCATCTC +
Preference number: 6 (lower is better)
Translates to: RGRAVGEAGHAA*VGIIAVVAGHL
Trigger: GAGATGACCTGCTACGACAGCGATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp ACTGGCCATAGCGCCATGACAGAGGGGACGAGCGGTTaGAGAGGCTGGACACGCTGCGTGGGTTGGCATCAT +
Preference number: 6 (lower is better)
Translates to: TGHSAMTEGTSG*RGWTRCVGWHH
Trigger: ATGATGCCAACCCACGCAGCGTGTCCAGCCTCTCCAACCGCTCGTCCCCTCTGTCATGGCGCTATGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp AGCCACTTCTCTCTGGGGCACGGGTGGGTAAGGAGTTaGGGAGGCCTGGGCAGAACCTTCTCCATAGAGGGC +
Preference number: 6 (lower is better)
Translates to: SHFSLGHGWVRS*GGLGRTFSIEG
Trigger: GCCCTCTATGGAGAAGGTTCTGCCCAGGCCTCCCCAACTCCTTACCCACCCGTGCCCCAGAGAGAAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CAA 72 bp GACATCAGCGGAGCTTCACGGCCCTTGGACCCCACCTaGCCTAAGCCTTTGGGCGCCTTGGCCATATCGTCG +
Preference number: 6 (lower is better)
Translates to: DISGASRPLDPT*PKPLGALAISS
Trigger: CGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp AGCGTCTTGGACATCAGCGGAGCTTCACGGCCCTTGGACCCCACCTaGCCTAAGCCTTTGGGCGCCTTGGCCATATCGTCGCTCCATTCG +
Preference number: 6 (lower is better)
Translates to: SVLDISGASRPLDPT*PKPLGALAISSLHS
Trigger: CGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp TCCGACTTGGACAGCGTCTTGGACATCAGCGGAGCTTCACGGCCCTaGGACCCCACCTTGCCTAAGCCTTTGGGCGCCTTGGCCATATCG +
Preference number: 6 (lower is better)
Translates to: SDLDSVLDISGASRP*DPTLPKPLGALAIS
Trigger: CGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGGGCCGTGAAGCTCCGCTGATGTCCAAGACGCTGTCCAAGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp TCCTGGGCAGCTTGGAGGCTTCCGACCTTCCGGAGCCCCTGGTATTaGAGTTTCTCCGTGAAAGCTCGTCCGAGAAGGGCTTCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: SWAAWRLPTFRSPWY*SFSVKARPRRASAP
Trigger: CGGGGCAGAAGCCCTTCTCGGACGAGCTTTCACGGAGAAACTCAAATACCAGGGGCTCCGGAAGGTCGGAAGCCTCCAAGCTGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS GCA 72 bp GCCAATTCTTCCGGATCCAGCCCGGCTGGAGAGGGCTaGTTTCGGGGTTGTCCTGGGACTATTCCATGGGGA +
Preference number: 6 (lower is better)
Translates to: ANSSGSSPAGEG*FRGCPGTIPWG
Trigger: TCCCCATGGAATAGTCCCAGGACAACCCCGAAAGCAGCCCTCTCCAGCCGGGCTGGATCCGGAAGAATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367302.5
ENST00000593583.1
CDS CCA 72 bp GGCTGTGTGAGTGATGGGGGAAGTTACAGCCACAGGTaGGGTCTTGCCCTTCTTCAGGGAACCAGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GCVSDGGSYSHR*GLALLQGTRVA
Trigger: GGCCACCCTGGTTCCCTGAAGAAGGGCAAGACCCCACCTGTGGCTGTAACTTCCCCCATCACTCACACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 72 bp GAACTTGACTTGGCTGGCCGGGGCAGGCTGCGGTACTaGATGTTAGAACGGGCTCCAGGAGCCAGGAATCCT +
Preference number: 6 (lower is better)
Translates to: ELDLAGRGRLRY*MLERAPGARNP
Trigger: AGGATTCCTGGCTCCTGGAGCCCGTTCTAACATCCAGTACCGCAGCCTGCCCCGGCCAGCCAAGTCAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 72 bp CTCGTGGGTGGGGATGCTGTTGGAGCGGGTGATTCTTaGCGTGGTGGCCGCAGTGGGACTCACTATGTTGGT +
Preference number: 6 (lower is better)
Translates to: LVGGDAVGAGDS*RGGRSGTHYVG
Trigger: ACCAACATAGTGAGTCCCACTGCGGCCACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp GGACAGGCCCAGAGCTCTTTTGCGCCTTGGCCTTGCTaGAGAGCAGCTCGTCGTCCGATTTGCCATCTTCGC +
Preference number: 6 (lower is better)
Translates to: GQAQSSFAPWPC*RAARRPICHLR
Trigger: GCGAAGATGGCAAATCGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp TTGACAGGGGCTGGAGTGGTCCGCCCACTGGCTACCTaGGTAGGCTCCTTCAGTCTGGAAGGCGTAAGGCCT +
Preference number: 6 (lower is better)
Translates to: LTGAGVVRPLAT*VGSFSLEGVRP
Trigger: AGGCCTTACGCCTTCCAGACTGAAGGAGCCTACCAAGGTAGCCAGTGGGCGGACCACTCCAGCCCCTGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 72 bp GAGGGGACAGGCCCAGAGCTCTTTTGCGCCTTGGCCTaGCTGGAGAGCAGCTCGTCGTCCGATTTGCCATCT +
Preference number: 6 (lower is better)
Translates to: EGTGPELFCALA*LESSSSSDLPS
Trigger: AGATGGCAAATCGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCCTGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp ACCTTGGTAGGCTCCTTCAGTCTGGAAGGCGTAAGGCCTCCCTGCTaGGTGCTGAGGAGACTGGGGTCAATGCTGCTGCTCACAGGGCGA +
Preference number: 6 (lower is better)
Translates to: TLVGSFSLEGVRPPC*VLRRLGSMLLLTGR
Trigger: TCGCCCTGTGAGCAGCAGCATTGACCCCAGTCTCCTCAGCACCAAGCAGGGAGGCCTTACGCCTTCCAGACTGAAGGAGCCTACCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 72 bp GGTTTGCCTGCGACTTTGAGGGCACTCTGGGCTGTGTaGGTGATGGGGGAAGTTACAGCCACAGGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: GLPATLRALWAV*VMGEVTATGGV
Trigger: GACCCCACCTGTGGCTGTAACTTCCCCCATCACTCACACAGCCCAGAGTGCCCTCAAAGTCGCAGGCAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 72 bp GCCTTGGCTTTGGCCTTCTCCTTTTCCCGATCTGTCTaGTTGACAGGGGCTGGAGTGGTCCGCCCACTGGCT +
Preference number: 6 (lower is better)
Translates to: ALALAFSFSRSV*LTGAGVVRPLA
Trigger: AGCCAGTGGGCGGACCACTCCAGCCCCTGTCAATCAGACAGATCGGGAAAAGGAGAAGGCCAAAGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS GCA 72 bp CACTGGGGAGGCTCATTGGCATCTGGAGGGACTCCATaGTCCTGTGCAGGCCTGAGAGTTTGGGGTACATGC +
Preference number: 6 (lower is better)
Translates to: HWGGSLASGGTP*SCAGLRVWGTC
Trigger: GCATGTACCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGATGCCAATGAGCCTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS GCA 72 bp ATCCAGCAGCTCAGTGTCCTTCTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGATGTCATATTCACCAG +
Preference number: 6 (lower is better)
Translates to: IQQLSVLLLGRL*QVSQAGCHIHQ
Trigger: CTGGTGAATATGACATCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAGAAGGACACTGAGCTGCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000438083.1
ENST00000469130.5
CDS GCA 72 bp AGGGGACAGGCCCAGAGCTCTTTTGCGCCTTGGCCTTaGTGGAGAGCAGCTCGTCGTCCGATTTGCCATCTT +
Preference number: 6 (lower is better)
Translates to: RGQAQSSFAPWP*WRAARRPICHL
Trigger: AAGATGGCAAATCGGACGACGAGCTGCTCTCCAGCAAGGCCAAGGCGCAAAAGAGCTCTGGGCCTGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp GGTGGGGGCAGGTGGTACAGCTTTGATTGGTCTTGTTaGGCTGATGGCCAGGGAAGTGTGTCCCGGACCCAT +
Preference number: 6 (lower is better)
Translates to: GGGRWYSFDWSC*ADGQGSVSRTH
Trigger: ATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp CTTGTCTCTCGCCAATTCTTCCGGATCCAGCCCGGCTaGAGAGGGCTGCTTTCGGGGTTGTCCTGGGACTAT +
Preference number: 6 (lower is better)
Translates to: LVSRQFFRIQPG*RGLLSGLSWDY
Trigger: ATAGTCCCAGGACAACCCCGAAAGCAGCCCTCTCCAGCCGGGCTGGATCCGGAAGAATTGGCGAGAGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367302.5
ENST00000593583.1
CDS CAA 72 bp GTGGCAGCTCTGCCAGCTTGGTGGCTGTGGGGTGGCTaGCTTGGTTCTTGGGAGTACTTTCTGGGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: VAALPAWWLWGG*LGSWEYFLGSQ
Trigger: TTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp CCACTCATTAGCTCCAGGCCCTGGGAGAAGCTGGCTGAGTTAATATaGAGGATGGGTGCCGGACTGGGGGTGAAGCAGGAAGGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: PLISSRPWEKLAELI*RMGAGLGVKQEGRG
Trigger: CCCTCTCCCTTCCTGCTTCACCCCCAGTCCGGCACCCATCCTCAATATTAACTCAGCCAGCTTCTCCCAGGGCCTGGAGCTAATGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp GAACCAGGGTGGCCCAGGCTGATGGGCTTTTTCAGTTCTCCACCCTaGGATGAATCATCACAGCTCTCAGGCCGCTCCCTCCGCCACTTA +
Preference number: 6 (lower is better)
Translates to: EPGWPRLMGFFSSPP*DESSQLSGRSLRHL
Trigger: TAAGTGGCGGAGGGAGCGGCCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS GCA 72 bp TGGCAGCTCTGCCAGCTTGGTGGCTGTGGGGTGGCTTaGTTGGTTCTTGGGAGTACTTTCTGGGGAGCCAAT +
Preference number: 6 (lower is better)
Translates to: WQLCQLGGCGVA*LVLGSTFWGAN
Trigger: ATTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS GCA 72 bp AGGCTCATTGGCATCTGGAGGGACTCCATGCTCCTGTaGAGGCCTGAGAGTTTGGGGTACATGCGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: RLIGIWRDSMLL*RPESLGYMRVS
Trigger: AGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGATGCCAATGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS GCA 72 bp AAGAATTCCTGCTGCTTCAAGTCCCCTTTGATGATGTaGTGCGGGGGCATCCTCACCACCACCCGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: KNSCCFKSPLMM*CGGILTTTRRV
Trigger: GACCCTCCGGGTGGTGGTGAGGATGCCCCCGCAGCACATCATCAAAGGGGACTTGAAGCAGCAGGAATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp CTCAGGCGGTCCCGACCAGCATCAGAGGAGGAGCGTTaGAGCCCAGTATTCTTCACTGCAAGCTTACCCTTG +
Preference number: 6 (lower is better)
Translates to: LRRSRPASEEER*SPVFFTASLPL
Trigger: CAAGGGTAAGCTTGCAGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGATGCTGGTCGGGACCGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 72 bp CTTCTCCTTTTCCCGATCTGTCTGATTGACAGGGGCTaGAGTGGTCCGCCCACTGGCTACCTTGGTAGGCTC +
Preference number: 6 (lower is better)
Translates to: LLLFPICLIDRG*SGPPTGYLGRL
Trigger: GAGCCTACCAAGGTAGCCAGTGGGCGGACCACTCCAGCCCCTGTCAATCAGACAGATCGGGAAAAGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp GACTGGTCATCGGATTCAGGCAGCCCACCAATGGTATaGGAATGTCGCCTCTCCTTGGTCTCCTCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: DWSSDSGSPPMV*ECRLSLVSSWD
Trigger: GTCCCAGGAGGAGACCAAGGAGAGGCGACATTCCCATACCATTGGTGGGCTGCCTGAATCCGATGACCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000438083.1
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp GACATGGGAAGTGCAGGGGGAGAAGGCAGCTCTGACTaGTCATCGGATTCAGGCAGCCCACCAATGGTATGG +
Preference number: 6 (lower is better)
Translates to: DMGSAGGEGSSD*SSDSGSPPMVW
Trigger: CCATACCATTGGTGGGCTGCCTGAATCCGATGACCAGTCAGAGCTGCCTTCTCCCCCTGCACTTCCCATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000438083.1
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp TCAGCAGGAGGCTTATGTAGTGCTGCATCATCGGCTTaGGGATCAGCGTCTCGAACACCAGGCTGTCGACGC +
Preference number: 6 (lower is better)
Translates to: SAGGLCSAASSA*GSASRTPGCRR
Trigger: GCGTCGACAGCCTGGTGTTCGAGACGCTGATCCCCAAGCCGATGATGCAGCACTACATAAGCCTCCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp CCTTGGACCCCACCTTGCCTAAGCCTTTGGGCGCCTTaGCCATATCGTCGCTCCATTCGGGCTCATAAAGCT +
Preference number: 6 (lower is better)
Translates to: PWTPPCLSLWAP*PYRRSIRAHKA
Trigger: AGCTTTATGAGCCCGAATGGAGCGACGATATGGCCAAGGCGCCCAAAGGCTTAGGCAAGGTGGGGTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp TGGGCAGCTTGGAGGCTTCCGACCTTCCGGAGCCCCTaGTATTTGAGTTTCTCCGTGAAAGCTCGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: WAAWRLPTFRSP*YLSFSVKARPR
Trigger: TCTCGGACGAGCTTTCACGGAGAAACTCAAATACCAGGGGCTCCGGAAGGTCGGAAGCCTCCAAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CAA 72 bp GCTTGGAGGCTTCCGACCTTCCGGAGCCCCTGGTATTaGAGTTTCTCCGTGAAAGCTCGTCCGAGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: AWRLPTFRSPWY*SFSVKARPRRA
Trigger: AGCCCTTCTCGGACGAGCTTTCACGGAGAAACTCAAATACCAGGGGCTCCGGAAGGTCGGAAGCCTCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CAA 90 bp CACAGCTTGGGTACCCAGTCGAGCACCCGAAGCAGCTCTTCCTTGTaGGCATTGATGTCGCTGTCTGACTCTACCAGCTTCCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: HSLGTQSSTRSSSSL*ALMSLSDSTSFLLR
Trigger: CCTGAGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACTGGGTACCCAAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp CAGGCTGATGGGCTTTTTCAGTTCTCCACCCTTGGATaGATCATCACAGCTCTCAGGCCGCTCCCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: QADGLFQFSTLG*IITALRPLPPP
Trigger: TGGCGGAGGGAGCGGCCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAAAAAGCCCATCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 72 bp GCTGCTTTCATCCCAGGGCTCCAGCTGTACTTAAAGTaGCAGAGCCCCATTTCCCCGCCGCTGACTTCTGTC +
Preference number: 6 (lower is better)
Translates to: AAFIPGLQLYLK*QSPISPPLTSV
Trigger: GACAGAAGTCAGCGGCGGGGAAATGGGGCTCTGTCACTTTAAGTACAGCTGGAGCCCTGGGATGAAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS GCA 72 bp GATGCCAGCGTTCTGCTGTCCGGGGGTGACAGTGATTaGCGAACCCTTAAAGTGTTGCCTGAAGGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: DASVLLSGGDSD*RTLKVLPEGWG
Trigger: ACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCCGGACAGCAGAACGCTGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp CTCTACTTGCCTTCATGCCCTAGGAAGCTGGGGTCATaGCCCTGGTACTCCTCACTGACCAGTCCAGACATC +
Preference number: 6 (lower is better)
Translates to: LYLPSCPRKLGS*PWYSSLTSPDI
Trigger: GATGTCTGGACTGGTCAGTGAGGAGTACCAGGGGCATGACCCCAGCTTCCTAGGGCATGAAGGCAAGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS GCA 72 bp ACCCTAGGAGGAAGTCTCCCCCAGATCACTTACCCATaGAGGAGAAGCTCTCCTCAGTCTCATGGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: TLGGSLPQITYP*RRSSPQSHGGA
Trigger: AGCCCCTCCATGAGACTGAGGAGAGCTTCTCCTGCATGGGTAAGTGATCTGGGGGAGACTTCCTCCTAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491403.1
CDS CCA 72 bp GCTCTGACTGGTCATCGGATTCAGGCAGCCCACCAATaGTATGGGAATGTCGCCTCTCCTTGGTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: ALTGHRIQAAHQ*YGNVASPWSPP
Trigger: AGGAGGAGACCAAGGAGAGGCGACATTCCCATACCATTGGTGGGCTGCCTGAATCCGATGACCAGTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000438083.1
ENST00000469130.5
ENST00000490213.5
CDS CAA 72 bp TGGCCCAGGCTGATGGGCTTTTTCAGTTCTCCACCCTaGGATGAATCATCACAGCTCTCAGGCCGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: WPRLMGFFSSPP*DESSQLSGRSL
Trigger: GAGGGAGCGGCCTGAGAGCTGTGATGATTCATCCAAGGGTGGAGAACTGAAAAAGCCCATCAGCCTGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 72 bp ACTCAGGCGGTCCCGACCAGCATCAGAGGAGGAGCGTaGGAGCCCAGTATTCTTCACTGCAAGCTTACCCTT +
Preference number: 6 (lower is better)
Translates to: TQAVPTSIRGGA*EPSILHCKLTL
Trigger: AAGGGTAAGCTTGCAGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGATGCTGGTCGGGACCGCCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 72 bp CAGCTCTGCCAGCTTGGTGGCTGTGGGGTGGCTTGCTaGGTTCTTGGGAGTACTTTCTGGGGAGCCAATACT +
Preference number: 6 (lower is better)
Translates to: QLCQLGGCGVAC*VLGSTFWGANT
Trigger: AGTATTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp CTTAGCATCACTCAGGCGGTCCCGACCAGCATCAGAGGAGGAGCGTaGGAGCCCAGTATTCTTCACTGCAAGCTTACCCTTGTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: LSITQAVPTSIRGGA*EPSILHCKLTLVCS
Trigger: GCTACAGACAAGGGTAAGCTTGCAGTGAAGAATACTGGGCTCCAACGCTCCTCCTCTGATGCTGGTCGGGACCGCCTGAGTGATGCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 90 bp GGCAGCTCTGCCAGCTTGGTGGCTGTGGGGTGGCTTGCTTGGTTCTaGGGAGTACTTTCTGGGGAGCCAATACTCTTCAAGGAGATGTTG +
Preference number: 6 (lower is better)
Translates to: GSSASLVAVGWLAWF*GVLSGEPILFKEML
Trigger: CAACATCTCCTTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGGCAGAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp TACCACAGCTTGGGTACCCAGTCGAGCACCCGAAGCAGCTCTTCCTaGTTGGCATTGATGTCGCTGTCTGACTCTACCAGCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: YHSLGTQSSTRSSSS*LALMSLSDSTSFLL
Trigger: GAGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACTGGGTACCCAAGCTGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp CCCGGAGGGTCACTTCCTCCTTTGGACCACAAGTACTaGTGCCATCCATGGGTGACAGGTCTGTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: PGGSLPPLDHKY*CHPWVTGLCLQ
Trigger: TTGCAGACACAGACCTGTCACCCATGGATGGCATCAGTACTTGTGGTCCAAAGGAGGAAGTGACCCTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp TCTGAGGTGCTGTGCTTCTCAAGGAAGGTGTGGAGATaGTACCACAGCTTGGGTACCCAGTCGAGCACCCGA +
Preference number: 6 (lower is better)
Translates to: SEVLCFSRKVWR*YHSLGTQSSTR
Trigger: TCGGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATCTCCACACCTTCCTTGAGAAGCACAGCACCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp CCGGGGGTGACAGTGATTGCCGAACCCTTAAAGTGTTaGCTGAAGGTTGGGGTCCAGGATGGTTTCTCGATC +
Preference number: 6 (lower is better)
Translates to: PGVTVIAEPLKC*LKVGVQDGFSI
Trigger: GATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp ACAAGAACGAAACTCCATCTTCTCCTCGGCCGTCTCTaGCAGGTGTCGCAGGCGGGATGTCATATTCACCAG +
Preference number: 6 (lower is better)
Translates to: TRTKLHLLLGRL*QVSQAGCHIHQ
Trigger: CTGGTGAATATGACATCCCGCCTGCGACACCTGGCAGAGACGGCCGAGGAGAAGATGGAGTTTCGTTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CCA 72 bp CCAGCTTGGTGGCTGTGGGGTGGCTTGCTTGGTTCTTaGGAGTACTTTCTGGGGAGCCAATACTCTTCAAGG +
Preference number: 6 (lower is better)
Translates to: PAWWLWGGLLGS*EYFLGSQYSSR
Trigger: CCTTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp GCTTCTCAAGGAAGGTGTGGAGATGATACCACAGCTTaGGTACCCAGTCGAGCACCCGAAGCAGCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: ASQGRCGDDTTA*VPSRAPEAALP
Trigger: AGGAAGAGCTGCTTCGGGTGCTCGACTGGGTACCCAAGCTGTGGTATCATCTCCACACCTTCCTTGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp TTGCCTTCATGCCCTAGGAAGCTGGGGTCATGCCCCTaGTACTCCTCACTGACCAGTCCAGACATCACACTA +
Preference number: 6 (lower is better)
Translates to: LPSCPRKLGSCP*YSSLTSPDITL
Trigger: TAGTGTGATGTCTGGACTGGTCAGTGAGGAGTACCAGGGGCATGACCCCAGCTTCCTAGGGCATGAAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 72 bp GAGCATGGGTCAGTGCATTGCCTAAAACAAGGTCCGTaGAGGGATGTGGTGGGAAACGAAGGTCCGATAGGG +
Preference number: 6 (lower is better)
Translates to: EHGSVHCLKQGP*RDVVGNEGPIG
Trigger: CCCTATCGGACCTTCGTTTCCCACCACATCCCTCCACGGACCTTGTTTTAGGCAATGCACTGACCCATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490213.5
CDS CAA 72 bp GCCAGCTTGGTGGCTGTGGGGTGGCTTGCTTGGTTCTaGGGAGTACTTTCTGGGGAGCCAATACTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: ASLVAVGWLAWF*GVLSGEPILFK
Trigger: CTTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAGAACCAAGCAAGCCACCCCACAGCCACCAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 72 bp TGGAGGGACTCCATGCTCCTGTGCAGGCCTGAGAGTTaGGGGTACATGCGGGTCTCTTTTGGCACACTGAAA +
Preference number: 6 (lower is better)
Translates to: WRDSMLLCRPES*GYMRVSFGTLK
Trigger: TTTCAGTGTGCCAAAAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 72 bp CAGTCGAGCACCCGAAGCAGCTCTTCCTTGTTGGCATaGATGTCGCTGTCTGACTCTACCAGCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QSSTRSSSSLLA*MSLSDSTSFLL
Trigger: GAGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp GGTACCCAGTCGAGCACCCGAAGCAGCTCTTCCTTGTaGGCATTGATGTCGCTGTCTGACTCTACCAGCTTC +
Preference number: 6 (lower is better)
Translates to: GTQSSTRSSSSL*ALMSLSDSTSF
Trigger: GAAGCTGGTAGAGTCAGACAGCGACATCAATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACTGGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp CGCCCATTTACTGGCTTGACAGGGATGCCTGAGGACTTCTGGATCTaGCTGAGAGTGGCTGAACCACCAGTTTGCATGACAGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: RPFTGLTGMPEDFWI*LRVAEPPVCMTVAV
Trigger: CACAGCCACTGTCATGCAAACTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 90 bp AGACTGTTGGAGTTGACCTTGTCAAGATTGGCTAGTGAGGGTGGTTaGACAAAGCTCTTCGCTGTGGCCCTGAGAGGGGTTGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RLLELTLSRLASEGG*TKLFAVALRGVGGS
Trigger: GCTGCCACCAACCCCTCTCAGGGCCACAGCGAAGAGCTTTGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp GTTCTGCTGTCCGGGGGTGACAGTGATTGCCGAACCCTTAAAGTGTaGCCTGAAGGTTGGGGTCCAGGATGGTTTCTCGATCTGGAGACT +
Preference number: 6 (lower is better)
Translates to: VLLSGGDSDCRTLKV*PEGWGPGWFLDLET
Trigger: AGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCCGGACAGCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp TCTTGCCCTTCTTCAGGGAACCAGGGTGGCCCAGGCTaGTGGGCTTTTTCAGTTCTCCACCCTTGGATGAAT +
Preference number: 6 (lower is better)
Translates to: SCPSSGNQGGPG*WAFSVLHPWMN
Trigger: ATTCATCCAAGGGTGGAGAACTGAAAAAGCCCATCAGCCTGGGCCACCCTGGTTCCCTGAAGAAGGGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS TCA 72 bp AGAGTTTGGGGTACATGCGGGTCTCTTTTGGCACACTaGAACCACTCATTAGCTCCAGGCCCTGGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RVWGTCGSLLAH*NHSLAPGPGRS
Trigger: GCTTCTCCCAGGGCCTGGAGCTAATGAGTGGTTTCAGTGTGCCAAAAGAGACCCGCATGTACCCCAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 72 bp AGTCGAGCACCCGAAGCAGCTCTTCCTTGTTGGCATTaGTGTCGCTGTCTGACTCTACCAGCTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SRAPEAALPCWH*CRCLTLPASSS
Trigger: TGAGGAGGAAGCTGGTAGAGTCAGACAGCGACATCAATGCCAACAAGGAAGAGCTGCTTCGGGTGCTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp GAGGATCTGAGTCCAGAGAACTTGGGGTGCTGTCTTTaGCTGTCCTATCCTCGGGAGGTGAGGCAATGCTGT +
Preference number: 6 (lower is better)
Translates to: EDLSPENLGCCL*LSYPREVRQCC
Trigger: ACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp AGAGGATCTGAGTCCAGAGAACTTGGGGTGCTGTCTTaGACTGTCCTATCCTCGGGAGGTGAGGCAATGCTG +
Preference number: 6 (lower is better)
Translates to: RGSESRELGVLS*TVLSSGGEAML
Trigger: CAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp TCCGGGGGTGACAGTGATTGCCGAACCCTTAAAGTGTaGCCTGAAGGTTGGGGTCCAGGATGGTTTCTCGAT +
Preference number: 6 (lower is better)
Translates to: SGGDSDCRTLKV*PEGWGPGWFLD
Trigger: ATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGTTCGGCAATCACTGTCACCCCCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp TGCAGCTTTTTCTCGGAGTCCGTGAGAAAAGAGAGGTaGGTGAGTGACTTCTGCTTGCGCAGGTTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: CSFFSESVRKER*VSDFCLRRLEA
Trigger: CGCCTCCAACCTGCGCAAGCAGAAGTCACTCACCAACCTCTCTTTTCTCACGGACTCCGAGAAAAAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp ATTGGCATCTGGAGGGACTCCATGCTCCTGTGCAGGCCTGAGAGTTaGGGGTACATGCGGGTCTCTTTTGGCACACTGAAACCACTCATT +
Preference number: 6 (lower is better)
Translates to: IGIWRDSMLLCRPES*GYMRVSFGTLKPLI
Trigger: AATGAGTGGTTTCAGTGTGCCAAAAGAGACCCGCATGTACCCCAAACTCTCAGGCCTGCACAGGAGCATGGAGTCCCTCCAGATGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp GACTTGATGGAGGGTGAAGCAGTCTCTGTAGAACCATGCTGTAGTTaGGGGGATGAGGGGGCTGAAGAGTCGGGTGTAGCAATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: DLMEGEAVSVEPCCS*GDEGAEESGVAISS
Trigger: AGAGGAGATTGCTACACCCGACTCTTCAGCCCCCTCATCCCCCAAACTACAGCATGGTTCTACAGAGACTGCTTCACCCTCCATCAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp CCATTTACTGGCTTGACAGGGATGCCTGAGGACTTCTaGATCTTGCTGAGAGTGGCTGAACCACCAGTTTGC +
Preference number: 6 (lower is better)
Translates to: PFTGLTGMPEDF*ILLRVAEPPVC
Trigger: GCAAACTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CCA 72 bp CTTCCTCCTCAGGTAACGAACCAGGAAGCCATTGGCTaGCTCCACGTTGTTGGAGAAGGTCAACATCCTGAA +
Preference number: 6 (lower is better)
Translates to: LPPQVTNQEAIG*LHVVGEGQHPE
Trigger: TTCAGGATGTTGACCTTCTCCAACAACGTGGAGCCAGCCAATGGCTTCCTGGTTCGTTACCTGAGGAGGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp ACTGGCTTGACAGGGATGCCTGAGGACTTCTGGATCTaGCTGAGAGTGGCTGAACCACCAGTTTGCATGACA +
Preference number: 6 (lower is better)
Translates to: TGLTGMPEDFWI*LRVAEPPVCMT
Trigger: TGTCATGCAAACTGGTGGTTCAGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 72 bp GAGTTGACCTTGTCAAGATTGGCTAGTGAGGGTGGTTaGACAAAGCTCTTCGCTGTGGCCCTGAGAGGGGTT +
Preference number: 6 (lower is better)
Translates to: ELTLSRLASEGG*TKLFAVALRGV
Trigger: AACCCCTCTCAGGGCCACAGCGAAGAGCTTTGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp GCACTGTTGGAAACATCTAAGCTAGTCTTGCGCCCATTTACTGGCTaGACAGGGATGCCTGAGGACTTCTGGATCTTGCTGAGAGTGGCT +
Preference number: 6 (lower is better)
Translates to: ALLETSKLVLRPFTG*TGMPEDFWILLRVA
Trigger: AGCCACTCTCAGCAAGATCCAGAAGTCCTCAGGCATCCCTGTCAAGCCAGTAAATGGGCGCAAGACTAGCTTAGATGTTTCCAACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000490213.5
CDS CAA 90 bp CTGGATGATGGTAGATCCAGACTGTTGGAGTTGACCTTGTCAAGATaGGCTAGTGAGGGTGGTTTGACAAAGCTCTTCGCTGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: LDDGRSRLLELTLSR*ASEGGLTKLFAVAL
Trigger: CAGGGCCACAGCGAAGAGCTTTGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGATCTACCATCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp GGCACATCCCCAATTCCTGTTTCCCGGTCTATCTGGTTGGCTAGGTaGGAAAGATACAGTTGCAGATCCTTGCAAGACTGCTGGTGCATG +
Preference number: 6 (lower is better)
Translates to: GTSPIPVSRSIWLAR*ERYSCRSLQDCWCM
Trigger: CATGCACCAGCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp ATCACCAGGGGCACATCCCCAATTCCTGTTTCCCGGTCTATCTGGTaGGCTAGGTTGGAAAGATACAGTTGCAGATCCTTGCAAGACTGC +
Preference number: 6 (lower is better)
Translates to: ITRGTSPIPVSRSIW*ARLERYSCRSLQDC
Trigger: GCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGCCCCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS TCA 72 bp AAGCTGAGACGTCAAGGTGGCCACTTTTTCCTGGGATaGTTCCAGTTCCCTACGAAGCTTCCGGATTTGCTC +
Preference number: 6 (lower is better)
Translates to: KLRRQGGHFFLG*FQFPTKLPDLL
Trigger: GAGCAAATCCGGAAGCTTCGTAGGGAACTGGAATCATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS GCA 72 bp GAAAGATACAGTTGCAGATCCTTGCAAGACTGCTGGTaGATGTTGAAGGTGCTGACGATGCCCTCTGTGACC +
Preference number: 6 (lower is better)
Translates to: ERYSCRSLQDCW*MLKVLTMPSVT
Trigger: GGTCACAGAGGGCATCGTCAGCACCTTCAACATGCACCAGCAGTCTTGCAAGGATCTGCAACTGTATCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp AGGGGCACATCCCCAATTCCTGTTTCCCGGTCTATCTaGTTGGCTAGGTTGGAAAGATACAGTTGCAGATCC +
Preference number: 6 (lower is better)
Translates to: RGTSPIPVSRSI*LARLERYSCRS
Trigger: GGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp GTAGTTTATATCTCTTTGGTCTTTTCCTGGGCAGCTTaGAGGCTTCCGACCTTCCGGAGCCCCTGGTATTTG +
Preference number: 6 (lower is better)
Translates to: VVYISLVFSWAA*RLPTFRSPWYL
Trigger: CAAATACCAGGGGCTCCGGAAGGTCGGAAGCCTCCAAGCTGCCCAGGAAAAGACCAAAGAGATATAAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CCA 72 bp TACTTTCCTGCTCCCTGTTCCCTCTCAATCTGTGGCTaGATGTCCTACCTTTGGGTGTGGTTTCTGAGGCAT +
Preference number: 6 (lower is better)
Translates to: YFPAPCSLSICG*MSYLWVWFLRH
Trigger: ATGCCTCAGAAACCACACCCAAAGGTAGGACATCCAGCCACAGATTGAGAGGGAACAGGGAGCAGGAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CAA 90 bp TTCTTGGGAGTACTTTCTGGGGAGCCAATACTCTTCAAGGAGATGTaGTCTGAGTCCAAGGCCACTGCCTTGGCTTTGGCCTTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: FLGVLSGEPILFKEM*SESKATALALAFSF
Trigger: AAAGGAGAAGGCCAAAGCCAAGGCAGTGGCCTTGGACTCAGACAACATCTCCTTGAAGAGTATTGGCTCCCCAGAAAGTACTCCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp GAGCTTGTAGCATGCAGATCTGGGACCTTTGAAGCATaGGTGGTATCACTGGATGATGGTAGATCCAGACTG +
Preference number: 6 (lower is better)
Translates to: ELVACRSGTFEA*VVSLDDGRSRL
Trigger: CAGTCTGGATCTACCATCATCCAGTGATACCACCCATGCTTCAAAGGTCCCAGATCTGCATGCTACAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp GCACATCCCCAATTCCTGTTTCCCGGTCTATCTGGTTaGCTAGGTTGGAAAGATACAGTTGCAGATCCTTGC +
Preference number: 6 (lower is better)
Translates to: AHPQFLFPGLSG*LGWKDTVADPC
Trigger: GCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp ACCCTTAAAGTGTTGCCTGAAGGTTGGGGTCCAGGATaGTTTCTCGATCTGGAGACTCAATGTAGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: TLKVLPEGWGPG*FLDLETQCSWQ
Trigger: CTGCCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCAACACTTTAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp GGCACATCCCCAATTCCTGTTTCCCGGTCTATCTGGTaGGCTAGGTTGGAAAGATACAGTTGCAGATCCTTG +
Preference number: 6 (lower is better)
Translates to: GTSPIPVSRSIW*ARLERYSCRSL
Trigger: CAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGGGGATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp TGTAGTTTATATCTCTTTGGTCTTTTCCTGGGCAGCTaGGAGGCTTCCGACCTTCCGGAGCCCCTGGTATTT +
Preference number: 6 (lower is better)
Translates to: CSLYLFGLFLGS*EASDLPEPLVF
Trigger: AAATACCAGGGGCTCCGGAAGGTCGGAAGCCTCCAAGCTGCCCAGGAAAAGACCAAAGAGATATAAACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367302.5
ENST00000491403.1
ENST00000593583.1
CDS CAA 90 bp AGGGAGTTGAGTGAGGAGCTGGCATTGAATTCTTCTGAACTGAGATaGTCTGAGGCATCGCTGAGTCCACTACTGATGGAGCTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: RELSEELALNSSELR*SEASLSPLLMELLS
Trigger: TGAAAGCAGCTCCATCAGTAGTGGACTCAGCGATGCCTCAGACAATCTCAGTTCAGAAGAATTCAATGCCAGCTCCTCACTCAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000490213.5
CDS CAA 90 bp GCATGGGTGGTATCACTGGATGATGGTAGATCCAGACTGTTGGAGTaGACCTTGTCAAGATTGGCTAGTGAGGGTGGTTTGACAAAGCTC +
Preference number: 6 (lower is better)
Translates to: AWVVSLDDGRSRLLE*TLSRLASEGGLTKL
Trigger: GAGCTTTGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGATCTACCATCATCCAGTGATACCACCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 72 bp TCAAAAGCAGCCACCAGATTAGCATTGGCAGAAAGCTaGGACGTCAAGGTGGCCACTTTTTCCTGGGATGAT +
Preference number: 6 (lower is better)
Translates to: SKAATRLALAES*DVKVATFSWDD
Trigger: ATCATCCCAGGAAAAAGTGGCCACCTTGACGTCTCAGCTTTCTGCCAATGCTAATCTGGTGGCTGCTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000438083.1
ENST00000469130.5
ENST00000490213.5
CDS GCA 72 bp TTTCATACCCACAAGGAGCTCCCTTGTCTATTCTTCTaGCTCCATACAGGCAGGTGGATGTCTAATCTGTCC +
Preference number: 6 (lower is better)
Translates to: FHTHKELPCLFF*LHTGRWMSNLS
Trigger: GGACAGATTAGACATCCACCTGCCTGTATGGAGGCAGAAGAATAGACAAGGGAGCTCCTTGTGGGTATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CCA 72 bp CCAGGATGGTTTCTCGATCTGGAGACTCAATGTAGTTaGCAGCTTCTTGAAGTTTCAGCAGCATGGCCATCA +
Preference number: 6 (lower is better)
Translates to: PGWFLDLETQCS*QLLEVSAAWPS
Trigger: TGATGGCCATGCTGCTGAAACTTCAAGAAGCTGCCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CCA 72 bp TGCCTGAAGGTTGGGGTCCAGGATGGTTTCTCGATCTaGAGACTCAATGTAGTTGGCAGCTTCTTGAAGTTT +
Preference number: 6 (lower is better)
Translates to: CLKVGVQDGFSI*RLNVVGSFLKF
Trigger: AAACTTCAAGAAGCTGCCAACTACATTGAGTCTCCAGATCGAGAAACCATCCTGGACCCCAACCTTCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp CCAATTCCTGTTTCCCGGTCTATCTGGTTGGCTAGGTaGGAAAGATACAGTTGCAGATCCTTGCAAGACTGC +
Preference number: 6 (lower is better)
Translates to: PIPVSRSIWLAR*ERYSCRSLQDC
Trigger: GCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 90 bp ATTGTTGAGTTCCTGCGAGAAGCAGTGGGAGTACTTGGGAGGGAGTaGAGTGAGGAGCTGGCATTGAATTCTTCTGAACTGAGATTGTCT +
Preference number: 6 (lower is better)
Translates to: IVEFLREAVGVLGRE*SEELALNSSELRLS
Trigger: AGACAATCTCAGTTCAGAAGAATTCAATGCCAGCTCCTCACTCAACTCCCTCCCAAGTACTCCCACTGCTTCTCGCAGGAACTCAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000490213.5
CDS CAA 90 bp GTGGTATCACTGGATGATGGTAGATCCAGACTGTTGGAGTTGACCTaGTCAAGATTGGCTAGTGAGGGTGGTTTGACAAAGCTCTTCGCT +
Preference number: 6 (lower is better)
Translates to: VVSLDDGRSRLLELT*SRLASEGGLTKLFA
Trigger: AGCGAAGAGCTTTGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGATCTACCATCATCCAGTGATACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 90 bp TTTGAAGCATGGGTGGTATCACTGGATGATGGTAGATCCAGACTGTaGGAGTTGACCTTGTCAAGATTGGCTAGTGAGGGTGGTTTGACA +
Preference number: 6 (lower is better)
Translates to: FEAWVVSLDDGRSRL*ELTLSRLASEGGLT
Trigger: TGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGATCTACCATCATCCAGTGATACCACCCATGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CCA 72 bp CAATTCCTGTTTCCCGGTCTATCTGGTTGGCTAGGTTaGAAAGATACAGTTGCAGATCCTTGCAAGACTGCT +
Preference number: 6 (lower is better)
Translates to: QFLFPGLSGWLG*KDTVADPCKTA
Trigger: AGCAGTCTTGCAAGGATCTGCAACTGTATCTTTCCAACCTAGCCAACCAGATAGACCGGGAAACAGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
CDS CAA 72 bp CTGGATGATGGTAGATCCAGACTGTTGGAGTTGACCTaGTCAAGATTGGCTAGTGAGGGTGGTTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: LDDGRSRLLELT*SRLASEGGLTK
Trigger: CTTTGTCAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGATCTACCATCATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS CAA 72 bp GTATCACTGGATGATGGTAGATCCAGACTGTTGGAGTaGACCTTGTCAAGATTGGCTAGTGAGGGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: VSLDDGRSRLLE*TLSRLASEGGL
Trigger: CAAACCACCCTCACTAGCCAATCTTGACAAGGTCAACTCCAACAGTCTGGATCTACCATCATCCAGTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367295.5
ENST00000367296.8
ENST00000367302.5
ENST00000430015.5
ENST00000469130.5
ENST00000490213.5
CDS TCA 72 bp ATTAGAGGCTTGGGCAACCAGGCAAATGATAATACCTaGGATACGCAAACTGCAGAAGGGAAAAGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: IRGLGNQANDNT*DTQTAEGKRLA
Trigger: AGCCAACCTTTTCCCTTCTGCAGTTTGCGTATCTCAGGTATTATCATTTGCCTGGTTGCCCAAGCCTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS TCA 72 bp CGCTGTGCCTGGCCTGGAGTAATTTCTGATCTTAACTaGTATAATTGGATTACTCTGGGGGCAAGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: RCAWPGVISDLN*YNWITLGARKA
Trigger: TGCTTTCCTTGCCCCCAGAGTAATCCAATTATATCAGTTAAGATCAGAAATTACTCCAGGCCAGGCACAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 72 bp CTCCCATCCATCTTGACTTCTGTAGCAAAGCTTGACTaGTTACTAAACGTCCAGGCTAACTTGCCATTTCAG +
Preference number: 6 (lower is better)
Translates to: LPSILTSVAKLD*LLNVQANLPFQ
Trigger: CTGAAATGGCAAGTTAGCCTGGACGTTTAGTAACCAGTCAAGCTTTGCTACAGAAGTCAAGATGGATGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 72 bp CTCCCTTGTCTATTCTTCTGCCTCCATACAGGCAGGTaGATGTCTAATCTGTCCATAAAGACCTATGTTGGT +
Preference number: 6 (lower is better)
Translates to: LPCLFFCLHTGR*MSNLSIKTYVG
Trigger: ACCAACATAGGTCTTTATGGACAGATTAGACATCCACCTGCCTGTATGGAGGCAGAAGAATAGACAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477118.2
CDS CAA 72 bp AGAGGGCATCCCAAAACATTAGATAAGCGGTCACTCTaGGCCAGAAGGGATGAATCCTTCCAACAAAATGGA +
Preference number: 6 (lower is better)
Translates to: RGHPKTLDKRSL*ARRDESFQQNG
Trigger: TCCATTTTGTTGGAAGGATTCATCCCTTCTGGCCAAGAGTGACCGCTTATCTAATGTTTTGGGATGCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 72 bp GATATAATTGGATTACTCTGGGGGCAAGGAAAGCACTaGAAGAACGAGCACAGCAAGACCAGTAAGGAAATT +
Preference number: 6 (lower is better)
Translates to: DIIGLLWGQGKH*KNEHSKTSKEI
Trigger: AATTTCCTTACTGGTCTTGCTGTGCTCGTTCTTCCAGTGCTTTCCTTGCCCCCAGAGTAATCCAATTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 72 bp AGCATAATTATAGTGGGGTTAGGTGTGAAAGGGAGGTaGAAATGTAGGATCGACTGGAGGAAGCAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: SIIIVGLGVKGR*KCRIDWRKQRN
Trigger: ATTTCTTTGCTTCCTCCAGTCGATCCTACATTTCCACCTCCCTTTCACACCTAACCCCACTATAATTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CAA 72 bp GCAAAGCTTGACTGGTTACTAAACGTCCAGGCTAACTaGCCATTTCAGCACCATATAACCTATGTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: AKLDWLLNVQAN*PFQHHITYVSF
Trigger: AAAGCTCACATAGGTTATATGGTGCTGAAATGGCAAGTTAGCCTGGACGTTTAGTAACCAGTCAAGCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CAA 90 bp ACTTCTGTAGCAAAGCTTGACTGGTTACTAAACGTCCAGGCTAACTaGCCATTTCAGCACCATATAACCTATGTGAGCTTTGGTTGTTTC +
Preference number: 6 (lower is better)
Translates to: TSVAKLDWLLNVQAN*PFQHHITYVSFGCF
Trigger: GAAACAACCAAAGCTCACATAGGTTATATGGTGCTGAAATGGCAAGTTAGCCTGGACGTTTAGTAACCAGTCAAGCTTTGCTACAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS TCA 72 bp CATAAAAATGTAAAGGGCTATTTTAACGATGGTCTTTaGTGGCTCTTTGGCCGTGAGGTAAAGGTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: HKNVKGYFNDGL*WLFGREVKVKE
Trigger: CTCCTTAACCTTTACCTCACGGCCAAAGAGCCATCAAAGACCATCGTTAAAATAGCCCTTTACATTTTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CAA 72 bp GCCATTTCAGCACCATATAACCTATGTGAGCTTTGGTaGTTTCATTGGAAGAGTAGTTGGAGAACTAAAGTG +
Preference number: 6 (lower is better)
Translates to: AISAPYNLCELW*FHWKSSWRTKV
Trigger: CACTTTAGTTCTCCAACTACTCTTCCAATGAAACAACCAAAGCTCACATAGGTTATATGGTGCTGAAATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CCA 72 bp CTTGCCATTTCAGCACCATATAACCTATGTGAGCTTTaGTTGTTTCATTGGAAGAGTAGTTGGAGAACTAAA +
Preference number: 6 (lower is better)
Translates to: LAISAPYNLCEL*LFHWKSSWRTK
Trigger: TTTAGTTCTCCAACTACTCTTCCAATGAAACAACCAAAGCTCACATAGGTTATATGGTGCTGAAATGGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS TCA 72 bp TTATTGAAATATTCTAGGAGAAGAATGATAAAAACCTaGGCCAGGGTAGTGACAATACAGAAGAGGGATAGA +
Preference number: 6 (lower is better)
Translates to: LLKYSRRRMIKT*ARVVTIQKRDR
Trigger: TCTATCCCTCTTCTGTATTGTCACTACCCTGGCTCAGGTTTTTATCATTCTTCTCCTAGAATATTTCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469130.5
CDS CAA 72 bp AAAGAATATTTAGATAAAGGCATGCCTGTTCATGGATaGGAAGACTTAACATTGTTAAGAGGCAATACTCTC +
Preference number: 6 (lower is better)
Translates to: KEYLDKGMPVHG*EDLTLLRGNTL
Trigger: GAGAGTATTGCCTCTTAACAATGTTAAGTCTTCCAATCCATGAACAGGCATGCCTTTATCTAAATATTCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469130.5