RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAT9 (Homo sapiens)

Ensembl gene IDs: ENSG00000109065

Ensembl transcript IDs: ENST00000357814.8, ENST00000577428.5, ENST00000578798.5, ENST00000578822.5, ENST00000578862.5, ENST00000578947.1, ENST00000579218.5, ENST00000579837.1, ENST00000580216.5, ENST00000580301.5, ENST00000580632.5, ENST00000581136.5, ENST00000581451.1, ENST00000581466.1, ENST00000581762.1, ENST00000582118.1, ENST00000582168.5, ENST00000582359.5, ENST00000582524.5, ENST00000582870.5, ENST00000582993.5, ENST00000583476.5, ENST00000583689.5, ENST00000583757.5, ENST00000583834.5, ENST00000583989.5, ENST00000584022.5, ENST00000584409.5, ENST00000585240.5

Found 479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCTGGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCTGGCCCTaGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCA +
Preference number: 1 (lower is better)
Translates to: GLGLAGRGEGNWPWP*SLLSHTTSWREATA
Trigger: TGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTCTCCCCTCCCGGCCAAACCCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR CCA 90 bp GCATCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTaGGCTCTAGGAGAGACAACAGGAGCGGCGCTGACGCCGTGTGCC +
Preference number: 1 (lower is better)
Translates to: ASRERPQCQGPYPCS*ALGETTGAALTPCA
Trigger: GGCACACGGCGTCAGCGCCGCTCCTGTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR TCA 90 bp GGAGGCCACAGCAAGCCCCGCCAGAGTCTGAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: GGHSKPRQSLKGLER*FPAWARSTLPVQGS
Trigger: AGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCTTGCTGTGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
3UTR TCA 90 bp CACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGATTCCCAGCCTGGGCCAGGAGCACTC +
Preference number: 1 (lower is better)
Translates to: HTTSWREATASPARV*RASKGDSQPGPGAL
Trigger: GAGTGCTCCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR GCA 90 bp AAGACAGCATCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTaGAGCTGGGCTCTAGGAGAGACAACAGGAGCGGCGCTGACGCCG +
Preference number: 1 (lower is better)
Translates to: KTASRERPQCQGPYP*SWALGETTGAALTP
Trigger: CGGCGTCAGCGCCGCTCCTGTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR CCA 90 bp CCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCTGGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: PMDPCPPFQLPRVWV*VWPGGEKGTGPGPG
Trigger: TCCAGGGCCAGGGCCAGTTCCCTTCTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR CCA 90 bp ACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTaGGTCTGGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: TSPMDPCPPFQLPRV*VWVWPGGEKGTGPG
Trigger: GCCAGGGCCAGTTCCCTTCTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR GCA 90 bp GCCTCGAAAGGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTaGAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTC +
Preference number: 1 (lower is better)
Translates to: ASKGDSQPGPGALSQ*RALVFEVYGPNTLL
Trigger: GAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACCTTTCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
3UTR GCA 90 bp GCACCTCCAGCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTaGCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCG +
Preference number: 1 (lower is better)
Translates to: APPAPTFIPTSPMDP*PPFQLPRVWVWVWP
Trigger: CGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGCTGGAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR TCA 90 bp GTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTaGGTGGACACTGTGAGGCTGGGGCTCGTGGTAGCTCTTCACATG +
Preference number: 1 (lower is better)
Translates to: VTPACLCRTRGPSCP*VDTVRLGLVVALHM
Trigger: CATGTGAAGAGCTACCACGAGCCCCAGCCTCACAGTGTCCACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR TCA 90 bp CAAGCTGCAGAGGAGGAACCTTCACCTGCCCCCAACCCTCACACCTaGACAAAGTTCACCTGGGGCCTGCCCACTTCCCGCATTGTCTGC +
Preference number: 1 (lower is better)
Translates to: QAAEEEPSPAPNPHT*TKFTWGLPTSRIVC
Trigger: GCAGACAATGCGGGAAGTGGGCAGGCCCCAGGTGAACTTTGTTCAGGTGTGAGGGTTGGGGGCAGGTGAAGGTTCCTCCTCTGCAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR TCA 90 bp ACAAGCCTCCTGTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTaGCAGCCAGCCACCCCAGATGATGGCAGGGCAAGGAAGACTGTT +
Preference number: 1 (lower is better)
Translates to: TSLLWLCLESMPGLS*QPATPDDGRARKTV
Trigger: AACAGTCTTCCTTGCCCTGCCATCATCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCACAGGAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR GCA 90 bp TTTATACTGAGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTaGTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAA +
Preference number: 1 (lower is better)
Translates to: FILRHVFGSSCSHAV*CETPRSRVLGGLRQ
Trigger: TTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCTCAGTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357814.8
3UTR-3UTR CCA 90 bp AGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGACCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SLLSHTTSWREATASPARPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...TCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR GCA 90 bp AGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SLLSHTTSWREATASPARMGPTP*SHRVAA
Trigger: GGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCAT...TCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR TCA 90 bp CCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 2 (lower is better)
Translates to: PGVCSATPLAGGRPQQAPQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...CGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR TCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGAT +
Preference number: 2 (lower is better)
Translates to: IPALHSSFLESGSGFGRESPARV*RASKGD
Trigger: ATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCT...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR CCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTPRVWV*VWPGGE
Trigger: CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGG...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: APTFIPTSPMDPCPPFQLPRVWV*VWPGGE
Trigger: CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGG...AAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR CAA 90 bp GGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTaGAGTGGACACTGTGAGGCTGGGGCTCGTGGTAGCTCTTCACAT +
Preference number: 2 (lower is better)
Translates to: GHTSLPLQDKRTKLP*SGHCEAGARGSSSH
Trigger: ATGTGAAGAGCTACCACGAGCCCCAGCCTCACAGTGTCCACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR TCA 90 bp CATTGTCTGCTCACACTTTCTTACCGTAAGACAGCATCGCGAGAACGGCCTCAGCAACAGGAGCGGCGCTaGCGCCGTGTGCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: HCLLTLSYRKTASRERPQQQERR*RRVPGS
Trigger: GGAGCCTGGCACACGGCGTCAGCGCCGCTCCTGTTG...CTGAGGCCGTTCTCGCGATGCTGTCTTACGGTAAGAAAGTGTGAGCAGACAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR-3UTR GCA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: SHLHPDISHGSLPSIPASMGPTP*SHRVAA
Trigger: GGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCAT...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR GCA 90 bp GGTGGAAGGAAACTGGGCCAACTCTACTTTGTAAGCCATAGGGTGCCAGGTAGCAGCCTGTGCCTCCACTaGCCCCGCGTGGCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: GGRKLGQLYFVSHRVPGSSLCLH*PRVASQ
Trigger: CTGACTGGCCACGCGGGGGCAGTGGAGGCACAGGCT...GCTACCTGGCACCCTATGGCTTACAAAGTAGAGTTGGCCCAGTTTCCTTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp GTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGACAGCCAGCCACCCCAGACCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: VAVFRKHARPFLTASHPRPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGAGCCACACCACTAGCTaGAGGGAGGCCACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: SRHLPWIPALHSSFLESGSHTTS*REATAS
Trigger: GCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCT...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR CCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCCCAGGGCAGCACCTCTaGCCTCTAAGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTPGQHL*PLRRKA
Trigger: GGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGG...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp GTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGACAGCCAGCCACCCCAGACCAGTCAGGTGCAGCTaGTCCCAGAGATGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: VAVFRKHARPFLTASHPRPVRCS*SQRWRV
Trigger: CACCCTCCATCTCTGGGAGCAGCTGCACCTGACTGG...TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR TCA 90 bp AACTCAAGACTGGCTCCAGGAGAGAGGAGGACGGACACTAGGTTGAGGGGCCAGCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 2 (lower is better)
Translates to: NSRLAPGERRTDTRLRGQQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...CTGGCCCCTCAACCTAGTGTCCGTCCTCCTCTCTCCTGGAGCCAGTCTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGGGAGCACTCTCCCAGTaGAGGGCTCTGGTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: SRHLPWIPALHSSFLESGGALSQ*RALVFE
Trigger: TTCAAAGACCAGAGCCCTGCACTGGGAGAGTGCTCC...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR TCA 90 bp GTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: VPVVHMQSAVRLQDQGCWKGLER*FPAWAR
Trigger: CCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTT...CCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGGGAGCACTCTCCCAGTaGAGGGCTCTGGTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: PSSRHLPWIPALHSSFLEGALSQ*RALVFE
Trigger: TTCAAAGACCAGAGCCCTGCACTGGGAGAGTGCTCC...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR-3UTR CCA 90 bp GTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTCCCGACATCTCCCATaGATCCCTGCCCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: VVHMQSAVRLQDQGCWEASRHLP*IPALHS
Trigger: GGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA...GGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp GTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTCTCCCATGGATCCCTaGCCTCCATTCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: VVHMQSAVRLQDQGCWEASPMDP*PPFQLP
Trigger: AGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGA...GGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR TCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGAGCCAGCCACCCCAGATaGTGGCAGGGCAAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRASHPR*WQGKED
Trigger: GTCTTCCTTGCCCTGCCATCATCTGGGGTGGCTGGC...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp TTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCCTGGCCCTGGAGTCTaGTCAGCCACACCACTAGCT +
Preference number: 2 (lower is better)
Translates to: FGSSCSHAVCCETPRSRVPGPGV*SATPLA
Trigger: AGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGG...CACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGAGAAGGGAACTGGCCCTaGCCCTGGAGTCTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: RHVFGSSCSHAVCCETPREGNWP*PWSLLS
Trigger: GCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTC...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp CACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCCAGCTTCCTAGAGTCTaGGTCTGGGTTTGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: HMDQTGKSGKLVVPGASLQLPRV*VWVWPG
Trigger: TCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTG...GAGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR TCA 90 bp GTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 2 (lower is better)
Translates to: VPVVHMQSAVRLQDQGCWQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...CCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR TCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GAVSNTNAFKLKTGSRREKGLER*FPAWAR
Trigger: CCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTT...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp TTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGACACCAGCCTGCCTCTaGAGGACAAGAGGACCAAGC +
Preference number: 2 (lower is better)
Translates to: FGSSCSHAVCCETPRSRVTPACL*RTRGPS
Trigger: GCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGT...CACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp TGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGTCTGGAACATCCGGATaGTTGGTTCATTTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: CRPISVRLLFHVAGLLQKSGTSG*LVHFLA
Trigger: GGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGA...CTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR-3UTR CCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGACCAGGGCAGCACCTCTaGCCTCTAAGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRPGQHL*PLRRKA
Trigger: GGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGG...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR GCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGAAGGGTCACACCAGCCTaGCTCTGCAGGACAAGAGGA +
Preference number: 2 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRRVTPA*LCRTRG
Trigger: TCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCT...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp AGCCACAAGGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCACCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SHKELYLTLMPLNSRLAPPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...TGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCCTTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp AGCCACAAGGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAAACTGGCCCTGGCCCTaGAGTCTGCTCAGCCACACC +
Preference number: 2 (lower is better)
Translates to: SHKELYLTLMPLNSRLAPNWPWP*SLLSHT
Trigger: GGTGTGGCTGAGCAGACTCCAGGGCCAGGGCCAGTT...TGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCCTTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp TTTATACTGAGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGGAAGGGAACTGGCCCTaGCCCTGGAGTCTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: FILRHVFGSSCSHAVCCEEGNWP*PWSLLS
Trigger: GCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTC...CTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCTCAGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357814.8
3UTR-3UTR TCA 90 bp TTTATACTGAGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACAGAGCTGATGGCCTaGCGCTCTCTTCAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: FILRHVFGSSCSHAVCCETELMA*RSLQEG
Trigger: GCCCTCCTGAAGAGAGCGTCAGGCCATCAGCTCTGT...CTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCTCAGTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357814.8
3UTR-3UTR CCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCAGCTGCTCCCAGAGATaGAGGGTGAGGAACAGACGT +
Preference number: 2 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCSCSQR*RVRNRR
Trigger: ACGTCTGTTCCTCACCCTCCATCTCTGGGAGCAGCT...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGAGACTGTTTCCCCACCTaGAAGATGCCCTACAAGCCT +
Preference number: 2 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRDCFPT*KMPYKP
Trigger: AGGCTTGTAGGGCATCTTCCAGGTGGGGAAACAGTC...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR GCA 72 bp GCCTCCACTGCCCCCGCGTGGCCAGTCAGGTGCAGCTaGTCCCAGAGATGGAGGGTGAGGAACAGACGTGGG +
Preference number: 3 (lower is better)
Translates to: ASTAPAWPVRCS*SQRWRVRNRRG
Trigger: CCCACGTCTGTTCCTCACCCTCCATCTCTGGGAGCAGCTGCACCTGACTGGCCACGCGGGGGCAGTGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR TCA 72 bp AGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGATTCCCAGCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: SWREATASPARV*RASKGDSQPGP
Trigger: TGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
3UTR GCA 72 bp TCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTaGAGCTGGGCTCTAGGAGAGACAACAGGAGCGGCG +
Preference number: 3 (lower is better)
Translates to: SRERPQCQGPYP*SWALGETTGAA
Trigger: CGCCGCTCCTGTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR CCA 72 bp GAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTaGGCTCTAGGAGAGACAACAGGAGCGGCGCTGACG +
Preference number: 3 (lower is better)
Translates to: ERPQCQGPYPCS*ALGETTGAALT
Trigger: CGTCAGCGCCGCTCCTGTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR TCA 72 bp AGCAAGCCCCGCCAGAGTCTGAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: SKPRQSLKGLER*FPAWARSTLPV
Trigger: CACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
3UTR GCA 72 bp TCTAGGAGAGACAACAGGAGCGGCGCTGACGCCGTGTaGCAGGCTCCAGTGCGGGCACTTGGCAGACACCAT +
Preference number: 3 (lower is better)
Translates to: SRRDNRSGADAV*QAPVRALGRHH
Trigger: ATGGTGTCTGCCAAGTGCCCGCACTGGAGCCTGGCACACGGCGTCAGCGCCGCTCCTGTTGTCTCTCCTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR CCA 72 bp CCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAGAAGGGAACTGGCCCT +
Preference number: 3 (lower is better)
Translates to: PCPPFQLPRVWV*VWPGGEKGTGP
Trigger: AGGGCCAGTTCCCTTCTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR TCA 72 bp GAGGAGGAACCTTCACCTGCCCCCAACCCTCACACCTaGACAAAGTTCACCTGGGGCCTGCCCACTTCCCGC +
Preference number: 3 (lower is better)
Translates to: EEEPSPAPNPHT*TKFTWGLPTSR
Trigger: GCGGGAAGTGGGCAGGCCCCAGGTGAACTTTGTTCAGGTGTGAGGGTTGGGGGCAGGTGAAGGTTCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR GCA 72 bp GGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCCCACAAGGCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GLWSLKCMGPTP*SHRVAAHKAQP
Trigger: TGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
3UTR GCA 72 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTaGCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: APTFIPTSPMDP*PPFQLPRVWVW
Trigger: CCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
3UTR CCA 72 bp GGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTaGAGCTTCACTCCCAGCCAGGGCAGCACCTCTGGC +
Preference number: 3 (lower is better)
Translates to: GPNGKIRKAGSA*SFTPSQGSTSG
Trigger: GCCAGAGGTGCTGCCCTGGCTGGGAGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CAA 90 bp GTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCCATGCCCGGCCTTTCTaGACAGCCAGCCACCCCAGA +
Preference number: 3 (lower is better)
Translates to: VVHMQSAVRLQDQGCWEAHARPF*TASHPR
Trigger: TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATG...GGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CAA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCGCAGGGCTCTGGTCTTaGAAGTGTATGGGCCCAACA +
Preference number: 3 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTAGLWS*KCMGPT
Trigger: TGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR TCA 72 bp CTGTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTaGCAGCCAGCCACCCCAGATGATGGCAGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: LWLCLESMPGLS*QPATPDDGRAR
Trigger: CCTTGCCCTGCCATCATCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CAA 90 bp GTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGACAGCCAGCCACCCCAGAGCAGGGCTCTGGTCTTaGAAGTGTATGGGCCCAACA +
Preference number: 3 (lower is better)
Translates to: VAVFRKHARPFLTASHPRAGLWS*KCMGPT
Trigger: TGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC...TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR TCA 72 bp TTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACTGTCAGTCTGAGGGTC +
Preference number: 3 (lower is better)
Translates to: FSSTWLVCSRSH*CSDSLTVSLRV
Trigger: GACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR-3UTR CAA 90 bp AGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTTGCCCACTTCCCGCATaGTCTGCTCACACTTTCTTA +
Preference number: 3 (lower is better)
Translates to: RALPTHLCKASLPRGWSACPLPA*SAHTFL
Trigger: TAAGAAAGTGTGAGCAGACAATGCGGGAAGTGGGCA...AGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR-3UTR CAA 90 bp CCATCAGCAGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGAACATCCGGATGCTaGGTTCATTTCCTTGCCCAA +
Preference number: 3 (lower is better)
Translates to: PSAGLCRPISVRLLFHVAGTSGC*VHFLAQ
Trigger: TTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCC...AGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR GCA 72 bp AAGTTCACCTGGGGCCTGCCCACTTCCCGCATTGTCTaGTCACACTTTCTTACCGTAAGACAGCATCGCGAG +
Preference number: 3 (lower is better)
Translates to: KFTWGLPTSRIV*SHFLTVRQHRE
Trigger: CTCGCGATGCTGTCTTACGGTAAGAAAGTGTGAGCAGACAATGCGGGAAGTGGGCAGGCCCCAGGTGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR-3UTR CAA 90 bp TGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACCTTACTTACTCTGGACCACCTGTaGTTCCCGGGTCAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: CETPRSRVLGGLRQVTLLTLDHL*FPGQVP
Trigger: GGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGT...AAGTAAGGTGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR GCA 72 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTaGTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: RHVFGSSCSHAV*CETPRSRVLGG
Trigger: GCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR-3UTR CAA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCACTCTGGACCACCTGTaGTTCCCGGGTCAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCTLDHL*FPGQVP
Trigger: GGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGT...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR GCA 72 bp AGTTTCTGGAACATCCGGATGCTTGGTTCATTTCCTTaGCCAATTTTAGCCTCAAACTTGGTCAGACCTAGC +
Preference number: 3 (lower is better)
Translates to: SFWNIRMLGSFP*PILASNLVRPS
Trigger: GCTAGGTCTGACCAAGTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
3UTR CCA 72 bp CTGCTCAAAGTGAAGTTTCTGGAACATCCGGATGCTTaGTTCATTTCCTTGCCCAATTTTAGCCTCAAACTT +
Preference number: 3 (lower is better)
Translates to: LLKVKFLEHPDA*FISLPNFSLKL
Trigger: AAGTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAACTTCACTTTGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GPGVCSATPLAGGRPQQASVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...GGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTTGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp GGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPGVCSATPLAGGRPQQAPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...GGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGGAAGGGAACTGGCCCTaGCCCTGGAGTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGVCSATPLAGGRPQQAPEGNWP*PWSLLS
Trigger: GCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTC...CGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGGTAGCCCGGCCACCCTaGGCCTGTGCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGVARPP*ACASTA
Trigger: GGCAGTGGAGGCACAGGCTCAGGGTGGCCGGGCTAC...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTGAGTGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: QGHTSLPLQDKRTKLPLSAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...ACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp ACCGTAAGACAGCATCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: TVRQHRENGLSAKALTPAAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...TGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTGTCTTACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp GCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCTAGGAGACGAGAACGGCCTCAGTaGCAAGGCCCTTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: ARTASVPRPLPLQLGSRRRERPQ*QGPYPC
Trigger: GCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCG...TCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTGCCACCCTGAGCCTGTaGCTCCACTGCCCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: APTFIPTSPMDPCPPFQLATLSL*LHCPRV
Trigger: CACGCGGGGGCAGTGGAGGCACAGGCTCAGGGTGGC...AAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLCRPISVRLLFHVAGLLSVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...GAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGTCCACTGCCCCCGCGTaGCCAGTCAGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGRESTAPA*PVRCSC
Trigger: GCAGCTGCACCTGACTGGCCACGCGGGGGCAGTGGA...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGGGACGGACACTAGGTTaGGGGGCCAGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGEGRTLG*GARPHS
Trigger: TGAGTGTGGCCTGGCCCCTCAACCTAGTGTCCGTCC...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: APTFIPTSPMDPCPPFQLAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...AAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RALPTHLCKASLPRGWSAAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...AGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CAGCATCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCTCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: QHRENGLSAKALTPAAGLSHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...GAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGGCGTGGCCAGTCAGGTaGAGCTGCTCCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGEAWPVR*SCSQRW
Trigger: CCATCTCTGGGAGCAGCTGCACCTGACTGGCCACGC...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLSVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PTHLCKASLPRGWSAPEASVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...GGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGTGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGAACTGGCCCTGGCCCTaGAGTCTGCTCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGENWPWP*SLLSHT
Trigger: GGTGTGGCTGAGCAGACTCCAGGGCCAGGGCCAGTT...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp GCCACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACATCCACTGCCCCCGCGTaGCCAGTCAGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATLTLDHLLFPGQVPRVTSTAPA*PVRCSC
Trigger: GCAGCTGCACCTGACTGGCCACGCGGGGGCAGTGGA...TGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CAGCATCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCTCCACTCGTGGTACCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: QHRENGLSAKALTPAAGLSTRGT*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGGTACCACGAGTGGA...GAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGREKGLER*FPAWAR
Trigger: CCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTT...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFSPARV*RASKGD
Trigger: ATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCT...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTGAGTGCCAGCCACCCCAGATaGTGGCAGGGCAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QGHTSLPLQDKRTKLPLSASHPR*WQGKED
Trigger: GTCTTCCTTGCCCTGCCATCATCTGGGGTGGCTGGC...ACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGATCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLSHTTSWREATASPARSCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...TCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCGAGAACGGCCTCAGTaGCAAGGCCCTTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCRERPQ*QGPYPC
Trigger: GCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCG...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTCTCACACAGAGTGGCTaGCCACAAGGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFLTQSG*PQGPAI
Trigger: GATGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAG...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTCCTGGCCCTGGAGTCTaGTCAGCCACACCACTAGCT +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFPGPGV*SATPLA
Trigger: AGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGG...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCTCTCCCATGGATCCCTaGCCTCCATTCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPGVCSATPLAGGRPQQASPMDP*PPFQLP
Trigger: AGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGA...GGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGACAGCCAGCCACCCCAGAAGCCTGTGCCTCCACTaGCCCCGCGTGGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VAVFRKHARPFLTASHPRSLCLH*PRVASQ
Trigger: CTGACTGGCCACGCGGGGGCAGTGGAGGCACAGGCT...TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHLFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CAGAAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGTGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QKPLMLGLTHCQSEGHLLCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...CAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR CCA 90 bp CAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTGAGTGAAGGGAACTGGCCCTaGCCCTGGAGTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGHTSLPLQDKRTKLPLSEGNWP*PWSLLS
Trigger: GCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTC...ACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHLHPDISHGSLPSIPASKGLER*FPAWAR
Trigger: CCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTT...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCAGAGGGACAGAGCTaGTGGCCTGACGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCPEGQS*WPDALF
Trigger: GAAGAGAGCGTCAGGCCATCAGCTCTGTCCCTCTGG...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATCAACAGGAGCGGCGCTaGCGCCGTGTGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLCKASLPRGWSAPEATDQQERR*RRVPGS
Trigger: GGAGCCTGGCACACGGCGTCAGCGCCGCTCCTGTTG...ATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTCCCAAGCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFPKLQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGCTTGGG...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580632.5
CDS-3UTR GCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLCRPISVRLLFHVAGLLCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...GAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGESCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp ACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCTAGGAGAGACAACTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TASVPRPLPLQLGSRRDNSCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...GTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCGAGAACGGCCTCAGTaGCAAGGCCCTTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLRERPQ*QGPYPC
Trigger: GCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCG...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTGGCCCTGGAGTCTaGTCAGCCACACCACTAGCT +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCPGPGV*SATPLA
Trigger: AGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGG...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTGCGTGGCCAGTCAGGTaGAGCTGCTCCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: APTFIPTSPMDPCPPFQLAWPVR*SCSQRW
Trigger: CCATCTCTGGGAGCAGCTGCACCTGACTGGCCACGC...AAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCATGTGCCAGGCTCCAGTaGGGGCACTTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: ALPTHLCKASLPRGWSAPCARLQ*GHLADT
Trigger: GGTGTCTGCCAAGTGCCCGCACTGGAGCCTGGCACA...TGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTACTCGTGGTACCTGCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFTRGTC*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGCAGGTACCACGAGT...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000581136.5
CDS-3UTR CCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGREASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVLFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: PISVRLLFHVAGLLQKPLLFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...CAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp CAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCATGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QSAVRLQDQGCWEALGKSCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...TGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp ACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTTGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: THLCKASLPRGWSAPEATCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGGGCTTCTCTTCCACGTaGCTGGTCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGEGFSST*LVCSRS
Trigger: GCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCC...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGAGCCACACCACTAGCTaGAGGGAGGCCACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGRESHTTS*REATAS
Trigger: GCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCT...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGGAAGGGAACTGGCCCTaGCCCTGGAGTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGEGNWP*PWSLLS
Trigger: GCTGAGCAGACTCCAGGGCCAGGGCCAGTTCCCTTC...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHPRVWV*VWPGGE
Trigger: CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGG...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGCAGCTTCCTAGAGTCTaGGTCTGGGTTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGEQLPRV*VWVWPG
Trigger: TCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTG...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp ATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: MDPCPPFQLPRVWVWVWPPPQKG*STSSNQ
Trigger: CTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGG...CGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTCTGAGGGTCACCTCCTaGAAAACACTGCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFLRVTS*KTLLVA
Trigger: GGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAG...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCACTCACTGTCAGTCTaGGGGTCACCTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: GPGVCSATPLAGGRPQQAHSLSV*GSPPEK
Trigger: TTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTG...GGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGEQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVKGLER*FPAWAR
Trigger: CCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTT...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTSPARV*RASKGD
Trigger: ATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCT...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGACAGAGCTGATGGCCTaGCGCTCTCTTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGTELMA*RSLQEG
Trigger: GCCCTCCTGAAGAGAGCGTCAGGCCATCAGCTCTGT...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGTAGCCCGGCCACCCTaGGCCTGTGCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: VPVVHMQSAVRLQDQGCWVARPP*ACASTA
Trigger: GGCAGTGGAGGCACAGGCTCAGGGTGGCCGGGCTAC...CCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACATGCCCGGCCTTTCTTaGCAGCCAGCCACCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHMPGLS*QPATPD
Trigger: ATCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCAT...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: PGVCSATPLAGGRPQQAPEAVKR*SSSDFI
Trigger: GATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTC...CGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LCRPISVRLLFHVAGLLQCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...CTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACGAGAACGGCCTCAGTaGCAAGGCCCTTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: RPISVRLLFHVAGLLQKPRERPQ*QGPYPC
Trigger: GCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCG...TGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCCTCACACAGAGTGGCTaGCCACAAGGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTLTQSG*PQGPAI
Trigger: GATGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAG...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGMGPTP*SHRVAA
Trigger: GGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCAT...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHMGPTP*SHRVAA
Trigger: GGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCAT...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp ATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGCCTGGCCCTGGAGTCTaGTCAGCCACACCACTAGCT +
Preference number: 4 (lower is better)
Translates to: MDPCPPFQLPRVWVWVWPPGPGV*SATPLA
Trigger: AGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCCAGG...CGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTCCTCTGCTTCCTCAGTaGCCCCTGAGCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFPLLPQ*PLSFIS
Trigger: GCTGATAAAGCTCAGGGGGCACTGAGGAAGCAGAGG...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp ATGCCCTACAAGCCTCCTGTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGAGCCTGTGCCTCCACTaGCCCCGCGTGGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: MPYKPPVAVFRKHARPFLSLCLH*PRVASQ
Trigger: CTGACTGGCCACGCGGGGGCAGTGGAGGCACAGGCT...CAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCACAGGAGGCTTGTAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCACTCGTGGTACCTGCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCTRGTC*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGCAGGTACCACGAGT...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357814.8
CDS-3UTR CCA 90 bp GCCACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACAGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATLTLDHLLFPGQVPRVTASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...TGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp AGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RALPTHLCKASLPRGWSAASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...AGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp GGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLTHCQSEGHLLKNTARSSVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...GCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR CCA 90 bp CAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGCTCAAAGTGTGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QSEGHLLKNTARSHLLKVCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...CACTTTGAGCAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp TGCCCCCAACCCTCACACCTGAACAAAGTTCACCTGGGGCCTGCCCACTTCCCGTCTCTTCCACGTGGCTaGTCTGCTCCAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: CPQPSHLNKVHLGPAHFPSLPRG*SAPEAT
Trigger: AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGA...CGGGAAGTGGGCAGGCCCCAGGTGAACTTTGTTCAGGTGTGAGGGTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTGAGTTCCCGACATCTCCCATaGATCCCTGCCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: QGHTSLPLQDKRTKLPLSSRHLP*IPALHS
Trigger: GGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA...ACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp ACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCTAGGAGAGACAACCCTTACCCCTGCAGCTaGGCTCTAGGAGAGACAACA +
Preference number: 4 (lower is better)
Translates to: TASVPRPLPLQLGSRRDNPYPCS*ALGETT
Trigger: TGTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGG...GTTGTCTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GCCATCAGCAGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCAGACCTAGCGTaGTCACTCCTCGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: AISRALPTHLCKASLPRGWSDLA*SLLAEE
Trigger: CTCCTCTGCGAGGAGTGACCACGCTAGGTCTGACCA...GCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp CGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: RPISVRLLFHVAGLLQKPPPQKG*STSSNQ
Trigger: CTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGG...TGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp CCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PGVCSATPLAGGRPQQAPSSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...CGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTACGCTGCAGCTCCTCTaGTTTCATCCACTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFTLQLL*FHPLVV
Trigger: TACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGT...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: GPGVCSATPLAGGRPQQAGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...GGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTTGGGCTCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: APTFIPTSPMDPCPPFQLWALQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCCA...AAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCTGAGGGTCACCTCCTaGAAAACACTGCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCLRVTS*KTLLVA
Trigger: GGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAG...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGTGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACT +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGRECSRSH*CSDSLT
Trigger: AGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCA...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVSPARV*RASKGD
Trigger: ATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCT...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCAGCCAGCCACCCCAGATaGTGGCAGGGCAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QSAVRLQDQGCWEALGKSASHPR*WQGKED
Trigger: GTCTTCCTTGCCCTGCCATCATCTGGGGTGGCTGGC...TGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGACAGCCAGCCACCCCAGAATGCCCGGCCTTTCTTaGCAGCCAGCCACCCCAGAT +
Preference number: 4 (lower is better)
Translates to: VAVFRKHARPFLTASHPRMPGLS*QPATPD
Trigger: ATCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCAT...TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp AACCTTCACCTGCCCCCAACCCTCACACCTGAACAAAGTTCACCTGGGGCCTGCCTCCTCCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: NLHLPPTLTPEQSSPGACLLLQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGGAGGAG...GCAGGCCCCAGGTGAACTTTGTTCAGGTGTGAGGGTTGGGGGCAGGTGAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp AGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: SLLSHTTSWREATASPAREAVKR*SSSDFI
Trigger: GATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTC...TCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLSCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RALPTHLCKASLPRGWSASCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...AGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTCATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGCATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGEHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp ATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTGCGCCTGGCTGGGCCTaGCACTTCTCGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: MLGLTHCQSEGHLLKNTAAPGWA*HFSASS
Trigger: GCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGC...AGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACTCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHSHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp ATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGTCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: MDPCPPFQLPRVWVWVWPSHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...CGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGTCTGGAACATCCGGATaGTTGGTTCATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PGVCSATPLAGGRPQQAPSGTSG*LVHFLA
Trigger: GGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGA...CGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AGCTGGGCTCTAGGAGAGACAACAGGAGCGGCGCTGACGCCGTGTGCCAGGCTCTCTGGAACATCCGGATaGTTGGTTCATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SWALGETTGAALTPCARLSGTSG*LVHFLA
Trigger: GGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGA...GAGCCTGGCACACGGCGTCAGCGCCGCTCCTGTTGTCTCTCCTAGAGCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCCCATCAGCAGGGCTCTaGCGACCCATCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SHLHPDISHGSLPSIPASPSAGL*RPISVR
Trigger: CCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGG...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCTCACACAGAGTGGCTaGCCACAAGGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVLTQSG*PQGPAI
Trigger: GATGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVMGPTP*SHRVAA
Trigger: GGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCAT...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGAGCACTCTCCCAGTaGAGGGCTCTGGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGREGALSQ*RALVFE
Trigger: TTCAAAGACCAGAGCCCTGCACTGGGAGAGTGCTCC...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACTCCCCACCTGGAAGATaGCCTACAAGCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHSPPGR*PTSLLW
Trigger: CCACAGGAGGCTTGTAGGGCATCTTCCAGGTGGGGA...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTGAGTCTCCAAGATCAAGGGTaGTGGGAGGCCTTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QGHTSLPLQDKRTKLPLSLQDQG*WEALGK
Trigger: CTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAG...ACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp TGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCGGCAAGGCCCTTACCCCTaGAGCTGGGCTCTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CKASLPRGWSAPEATDARQGPYP*SWALGE
Trigger: CTCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTG...CCGAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CTCCAGAAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQKPLMLGLTHCQSEGHLASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...GAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR CCA 90 bp CGTGGTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: RGSSSHGPNGKIRKAGSASVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...GGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LGLTHCQSEGHLLKNTARLFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...ACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR CCA 90 bp GGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCTCTCTTCCACGTGGCTaGTCTGCTCCAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GLCRPISVRLLFHVAGLLSLPRG*SAPEAT
Trigger: AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGA...GAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGGGCTTCTCTTCCACGTaGCTGGTCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLGFSST*LVCSRS
Trigger: GCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCC...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp ATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGCTTCTCTTCCACGTaGCTGGTCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MDPCPPFQLPRVWVWVWPGFSST*LVCSRS
Trigger: GCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCC...CGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp TCAGCAGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTGGCTTCTCTTCCACGTaGCTGGTCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SAGLCRPISVRLLFHVAGGFSST*LVCSRS
Trigger: GCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCC...ACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCCCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VVHMQSAVRLQDQGCWEAPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...GGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGACAGCCAGCCACCCCAGAAGCCACACCACTAGCTaGAGGGAGGCCACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: VAVFRKHARPFLTASHPRSHTTS*REATAS
Trigger: GCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCT...TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCCAGCTTCCTAGAGTCTaGGTCTGGGTTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTQLPRV*VWVWPG
Trigger: TCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTG...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCCCGACATCTCCCATaGATCCCTGCCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGSRHLP*IPALHS
Trigger: GGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCTCCACTCGTGGTACCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTSTRGT*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGGTACCACGAGTGGA...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580301.5
CDS-3UTR CCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGTCCACTCGTGGTACCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLSTRGT*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGGTACCACGAGTGGA...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580301.5
ENST00000580632.5
CDS-3UTR CCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTGATTTCATCCACTCGTaGTACCTGGGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFDFIHS*YLGTCS
Trigger: GGAGCATGTGCCCAGGTACCACGAGTGGATGAAATC...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580301.5
ENST00000580632.5
CDS-3UTR TCA 90 bp AGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGCCAGAGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: SLLSHTTSWREATASPARGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...TCTGGCGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCTAGGAGAGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: ARTASVPRPLPLQLGSRRGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...TCTCCTAGAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp GTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCGGATGGGCTCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VRLLFHVAGLLQKPLMLGWALQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCCA...TCCGAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583757.5
CDS-3UTR TCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCCTGAGGGTCACCTCCTaGAAAACACTGCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTLRVTS*KTLLVA
Trigger: GGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAG...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACT +
Preference number: 4 (lower is better)
Translates to: SHLHPDISHGSLPSIPASCSRSH*CSDSLT
Trigger: AGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCA...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTACATGCAGTCTGCTGTaGGACTCCAAGATCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFTCSLL*DSKIKG
Trigger: ACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGT...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCCCTGCAGCTGGGCTCTaGAATCATGACCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTPAAGL*NHDLDL
Trigger: GAGATCGAGGTCATGATTGCAGAGCCCAGCTGCAGG...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACCCTGCAGCTGGGCTCTaGAATCATGACCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHPAAGL*NHDLDL
Trigger: GAGATCGAGGTCATGATTGCAGAGCCCAGCTGCAGG...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAACGAGAACGGCCTCAGTaGCAAGGCCCTTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: KPLMLGLTHCQSEGHLLKRERPQ*QGPYPC
Trigger: GCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCG...TTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCCATCAGCAGGGCTCTaGCGACCCATCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVPSAGL*RPISVR
Trigger: CCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGAGCCACCCTGAGCCTGTaGCTCCACTGCCCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRATLSL*LHCPRV
Trigger: CACGCGGGGGCAGTGGAGGCACAGGCTCAGGGTGGC...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCCTCCAAGATCAAGGGTaGTGGGAGGCCTTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SHLHPDISHGSLPSIPASLQDQG*WEALGK
Trigger: CTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAG...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCCGTGTTCACATGCAGTCTaGTGTGAGACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: PGVCSATPLAGGRPQQAPCSHAV*CETPRS
Trigger: TGATCTTGGAGTCTCACAGCAGACTGCATGTGAACA...CGGGGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CAGAAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGACTCGTGGTACCTGCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: QKPLMLGLTHCQSEGHLLTRGTC*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGCAGGTACCACGAGT...CAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583476.5
CDS-3UTR CCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGATTTCATCCACTCGTaGTACCTGCTGGGCACATGC +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGREDFIHS*YLLGTC
Trigger: GCATGTGCCCAGCAGGTACCACGAGTGGATGAAATC...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000581136.5
CDS-3UTR CCA 90 bp ACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: THLCKASLPRGWSAPEATASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp CTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LMLGLTHCQSEGHLLKNTLFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...AGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR CCA 90 bp GTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGATGCAGCTCTCTTCGGTaGCGCCTGGCTGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VALHMDQTGKSGKLVVPGCSSLR*RLAGPA
Trigger: GGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCA...TCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp AACTCAAGACTGGCTCCAGGAGAGAGGAGGACGGACACTAGGTTGAGGGGCCAGTCTCTTCCACGTGGCTaGTCTGCTCCAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: NSRLAPGERRTDTRLRGQSLPRG*SAPEAT
Trigger: AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGA...CTGGCCCCTCAACCTAGTGTCCGTCCTCCTCTCTCCTGGAGCCAGTCTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGTCTCTTCCACGTGGCTaGTCTGCTCCAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLSLPRG*SAPEAT
Trigger: AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGA...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp GTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCAGCCACACCACTAGCTaGAGGGAGGCCACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: VVHMQSAVRLQDQGCWEASHTTS*REATAS
Trigger: GCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCT...GGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCCCGACATCTCCCATaGATCCCTGCCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PSSRHLPWIPALHSSFLESRHLP*IPALHS
Trigger: GGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CCA 90 bp AACTCAAGACTGGCTCCAGGAGAGAGGAGGACGGACACTAGGTTGAGGGGCCAGAAAGCTGGTAGTGCCTaGAGCTTCACTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSRLAPGERRTDTRLRGQKAGSA*SFTPSQ
Trigger: CTGGCTGGGAGTGAAGCTCCAGGCACTACCAGCTTT...CTGGCCCCTCAACCTAGTGTCCGTCCTCCTCTCTCCTGGAGCCAGTCTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGTGGTCAGACCTAGCGTaGTCACTCCTCGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVWSDLA*SLLAEE
Trigger: CTCCTCTGCGAGGAGTGACCACGCTAGGTCTGACCA...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580632.5
CDS-3UTR TCA 90 bp CCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: PLMLGLTHCQSEGHLLKNPPQKG*STSSNQ
Trigger: CTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGG...GTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGGAGAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CPPFQLPRVWVWVWPGGESSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CAAGTTCCCAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QVPRVTPACLCRTRGPSCRHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...GCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTGGGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGGCCACCTGCTCAAAGTaGAGTTTCTGGAACATCCGG +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLATCSK*SFWNIR
Trigger: CCGGATGTTCCAGAAACTTCACTTTGAGCAGGTGGC...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCGCCACCTGCTCAAAGTaGAGTTTCTGGAACATCCGG +
Preference number: 4 (lower is better)
Translates to: SHLHPDISHGSLPSIPASATCSK*SFWNIR
Trigger: CCGGATGTTCCAGAAACTTCACTTTGAGCAGGTGGC...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCTGAGGGTCACCTCCTaGAAAACACTGCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVLRVTS*KTLLVA
Trigger: GGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGTGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACT +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVCSRSH*CSDSLT
Trigger: AGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCA...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACCTTACTTGGACGGACACTAGGTTaGGGGGCCAGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: CETPRSRVLGGLRQVTLLGRTLG*GARPHS
Trigger: TGAGTGTGGCCTGGCCCCTCAACCTAGTGTCCGTCC...AAGTAAGGTGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp ACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: THCQSEGHLLKNTARSHLCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...CAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GCCACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: ATLTLDHLLFPGQVPRVTHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...TGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp TGTCCCAAGCTGCAGAGGAGGAACCTTCACCTGCCCCCAACCCTCACACCTGAACATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: CPKLQRRNLHLPPTLTPEHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...TTCAGGTGTGAGGGTTGGGGGCAGGTGAAGGTTCCTCCTCTGCAGCTTGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHLSASS*QLHCMA
Trigger: TGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAA...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGREEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTTCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LCKASLPRGWSAPEATDASHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...AGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGGGAGCACTCTCCCAGTaGAGGGCTCTGGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVGALSQ*RALVFE
Trigger: TTCAAAGACCAGAGCCCTGCACTGGGAGAGTGCTCC...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp TCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCCCTCCTGTCCCAAGCTaGAGAGGAGGAACCTTCACC +
Preference number: 4 (lower is better)
Translates to: SVRLLFHVAGLLQKPLMLPPVPS*RGGTFT
Trigger: GGTGAAGGTTCCTCCTCTGCAGCTTGGGACAGGAGG...GAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGGATTTCATCCACTCGTaGTACCTGCTGGGCACATGC +
Preference number: 4 (lower is better)
Translates to: SRHLPWIPALHSSFLESGDFIHS*YLLGTC
Trigger: GCATGTGCCCAGCAGGTACCACGAGTGGATGAAATC...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000581136.5
CDS-3UTR CCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGTCTCTTCCACGTGGCTaGTCTGCTCCAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVSLPRG*SAPEAT
Trigger: AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGA...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CCA 90 bp CTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTGGCTTCTCTTCCACGTaGCTGGTCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCKASLPRGWSAPEATDAGFSST*LVCSRS
Trigger: GCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCC...AGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp CGTGGTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGSSSHGPNGKIRKAGSAPRVWV*VWPGGE
Trigger: CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGG...GGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCCCTAGAGTCTGGGTCTaGGTTTGGCCGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSPRVWV*VWPGGE
Trigger: CTCCCCTCCCGGCCAAACCCAGACCCAGACTCTAGG...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCAAGGCCACACTCACTCTaGACCACCTGTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QSAVRLQDQGCWEALGKSRPHSL*TTCCSR
Trigger: CCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGCCT...TGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCCACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACAGACTGTTTCCCCACCTaGAAGATGCCCTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: ATLTLDHLLFPGQVPRVTDCFPT*KMPYKP
Trigger: AGGCTTGTAGGGCATCTTCCAGGTGGGGAAACAGTC...TGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp ACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTTCCACTCGTGGTACCTaGGCACATGCTCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: THLCKASLPRGWSAPEATSTRGT*AHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGGTACCACGAGTGGA...AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CCA 90 bp GCCACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACAGATTTCATCCACTCGTaGTACCTGGGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: ATLTLDHLLFPGQVPRVTDFIHS*YLGTCS
Trigger: GGAGCATGTGCCCAGGTACCACGAGTGGATGAAATC...TGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580301.5
CDS-3UTR TCA 90 bp GTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: VPVVHMQSAVRLQDQGCWPPQKG*STSSNQ
Trigger: CTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGG...CCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGACGCTGCAGCTCCTCTaGTTTCATCCACTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: PSSRHLPWIPALHSSFLETLQLL*FHPLVV
Trigger: TACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGT...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGACGCTGCAGCTCCTCTaGTTTCATCCACTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: PISVRLLFHVAGLLQKPLTLQLL*FHPLVV
Trigger: TACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGT...CAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACCGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHRHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TCAGCAGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SAGLCRPISVRLLFHVAGRHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...ACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp ATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGTCTGGGTTTGGCCGGGAGGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: IPALHSSFLESGSGFGREGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...CTCCCGGCCAAACCCAGACCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GGTGGAAGGAAACTGGGCCAACTCTACTTTGTAAGCCATAGGGTGCCAGGTAGCTGGGCTCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GGRKLGQLYFVSHRVPGSWALQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCCA...GCTACCTGGCACCCTATGGCTTACAAAGTAGAGTTGGCCCAGTTTCCTTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACTGGGCTCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PLMLGLTHCQSEGHLLKNWALQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCCA...GTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583476.5
CDS-3UTR TCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACCACTCACTGTCAGTCTaGGGGTCACCTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHHSLSV*GSPPEK
Trigger: TTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTG...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTAAGGGCCTCGAAAGGTaGTTCCCAGCCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTKGLER*FPAWAR
Trigger: CCTGGCCCAGGCTGGGAATCACCTTTCGAGGCCCTT...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCACAGAGCTGATGGCCTaGCGCTCTCTTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HMDQTGKSGKLVVPGASLTELMA*RSLQEG
Trigger: GCCCTCCTGAAGAGAGCGTCAGGCCATCAGCTCTGT...GAGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCCCAACCCTCACACCTaGACAAAGTTCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLTHCQSEGHLLKNTARSPNPHT*TKFTWG
Trigger: GCCCCAGGTGAACTTTGTTCAGGTGTGAGGGTTGGG...GCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp CTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LCRPISVRLLFHVAGLLQEAVKR*SSSDFI
Trigger: GATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTC...CTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp TGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACCTTACTTTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CETPRSRVLGGLRQVTLLCMAYS*SRVSGS
Trigger: GGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCA...AAGTAAGGTGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp ACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: THCQSEGHLLKNTARSHLSCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...CAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGCATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: PSSRHLPWIPALHSSFLEHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CTCCAGAAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: LQKPLMLGLTHCQSEGHLHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...GAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCGGACATCTTCCTGCCAGCTaGACTGCATGGCATACTCCT +
Preference number: 4 (lower is better)
Translates to: VRLLFHVAGLLQKPLMLGHLPAS*TAWHTP
Trigger: AGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATG...TCCGAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVLSASS*QLHCMA
Trigger: TGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAA...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CAGAAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QKPLMLGLTHCQSEGHLLLSASS*QLHCMA
Trigger: TGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAA...CAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PISVRLLFHVAGLLQKPLLSASS*QLHCMA
Trigger: TGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAA...CAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALPTHLCKASLPRGWSAPEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...TGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp CTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACTCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LTHCQSEGHLLKNTARSHSHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...GTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCCCTGCAGCTGGGCTCTaGAATCATGACCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: VVHMQSAVRLQDQGCWEAPAAGL*NHDLDL
Trigger: GAGATCGAGGTCATGATTGCAGAGCCCAGCTGCAGG...GGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGCCCTGGAGTCTGCTCAGCCACACCACTAGCTGGAGGGAGGCCACAGCAAGCCCTTGGTTCATTTCCTTaGCCAATTTTAGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GPGVCSATPLAGGRPQQALGSFP*PILASN
Trigger: GTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAG...GGCTTGCTGTGGCCTCCCTCCAGCTAGTGGTGTGGCTGAGCAGACTCCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR GCA 90 bp AGCTGGGCTCTAGGAGAGACAACAGGAGCGGCGCTGACGCCGTGTGCCAGGCTCCTTGGTTCATTTCCTTaGCCAATTTTAGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SWALGETTGAALTPCARLLGSFP*PILASN
Trigger: GTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAG...GAGCCTGGCACACGGCGTCAGCGCCGCTCCTGTTGTCTCTCCTAGAGCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp ATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCCATCAGCAGGGCTCTaGCGACCCATCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: ISVRLLFHVAGLLQKPLMPSAGL*RPISVR
Trigger: CCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGG...CATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR GCA 90 bp CAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCATCTCCCATGGATCCCTaGCCTCCATTCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSAVRLQDQGCWEALGKSSPMDP*PPFQLP
Trigger: AGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGA...TGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCCCAGTCAGGTGCAGCTaGTCCCAGAGATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HMDQTGKSGKLVVPGASLPVRCS*SQRWRV
Trigger: CACCCTCCATCTCTGGGAGCAGCTGCACCTGACTGG...GAGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCCCAGTCAGGTGCAGCTaGTCCCAGAGATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSPVRCS*SQRWRV
Trigger: CACCCTCCATCTCTGGGAGCAGCTGCACCTGACTGG...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGTGGAAGGAAACTGGGCCAACTCTACTTTGTAAGCCATAGGGTGCCAGGTAGCTCCCCACCTGGAAGATaGCCTACAAGCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGRKLGQLYFVSHRVPGSSPPGR*PTSLLW
Trigger: CCACAGGAGGCTTGTAGGGCATCTTCCAGGTGGGGA...GCTACCTGGCACCCTATGGCTTACAAAGTAGAGTTGGCCCAGTTTCCTTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTTGTTCACATGCAGTCTaGTGTGAGACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFCSHAV*CETPRS
Trigger: TGATCTTGGAGTCTCACAGCAGACTGCATGTGAACA...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRRESVAPG*ACHFSA
Trigger: TGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGA...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCLFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp TTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCCTGCTCACACAGAGTaGCTGCCCACAAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FGSSCSHAVCCETPRSRVPAHTE*LPTRPS
Trigger: GCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGG...CACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGGACTGTTTCCCCACCTaGAAGATGCCCTACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PSSRHLPWIPALHSSFLEDCFPT*KMPYKP
Trigger: AGGCTTGTAGGGCATCTTCCAGGTGGGGAAACAGTC...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGGATTTCATCCACTCGTaGTACCTGGGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: PISVRLLFHVAGLLQKPLDFIHS*YLGTCS
Trigger: GGAGCATGTGCCCAGGTACCACGAGTGGATGAAATC...CAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTPPQKG*STSSNQ
Trigger: CTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGG...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGCGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVRHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp CTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAACGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LPTHLCKASLPRGWSAPERHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...TTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp GGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCTGAGGGTCACCTCCTaGAAAACACTGCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: GLTHCQSEGHLLKNTARSLRVTS*KTLLVA
Trigger: GGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAG...GCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp CCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACCTGAGGGTCACCTCCTaGAAAACACTGCTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: PLMLGLTHCQSEGHLLKNLRVTS*KTLLVA
Trigger: GGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAG...GTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCACTCACTGTCAGTCTaGGGGTCACCTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: CRPISVRLLFHVAGLLQKHSLSV*GSPPEK
Trigger: TTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTG...CTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp AAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAATGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACT +
Preference number: 4 (lower is better)
Translates to: KPLMLGLTHCQSEGHLLKCSRSH*CSDSLT
Trigger: AGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCA...TTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp CATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATTGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACT +
Preference number: 4 (lower is better)
Translates to: HLCKASLPRGWSAPEATDCSRSH*CSDSLT
Trigger: AGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCA...ATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGAGCCCCGCCAGAGTCTaGAGGGCCTCGAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FGSSCSHAVCCETPRSRVSPARV*RASKGD
Trigger: ATCACCTTTCGAGGCCCTTCAGACTCTGGCGGGGCT...CACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCTTCCTCAGTGCCCCCTaGGCTTTATCAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HMDQTGKSGKLVVPGASLFLSAP*ALSAEG
Trigger: CCCCTCTGCTGATAAAGCTCAGGGGGCACTGAGGAA...GAGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVEAVKR*SSSDFI
Trigger: GATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTC...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PISVRLLFHVAGLLQKPLEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...CAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR GCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSSHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp AAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAACCTGCAGCTGGGCTCTaGAATCATGACCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: KPLMLGLTHCQSEGHLLKPAAGL*NHDLDL
Trigger: GAGATCGAGGTCATGATTGCAGAGCCCAGCTGCAGG...TTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583476.5
CDS-3UTR GCA 90 bp CATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATCCTGCAGCTGGGCTCTaGAATCATGACCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: HLCKASLPRGWSAPEATDPAAGL*NHDLDL
Trigger: GAGATCGAGGTCATGATTGCAGAGCCCAGCTGCAGG...ATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583757.5
CDS-3UTR GCA 90 bp AACTCAAGACTGGCTCCAGGAGAGAGGAGGACGGACACTAGGTTGAGGGGCCAGTCTGGAACATCCGGATaGTTGGTTCATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NSRLAPGERRTDTRLRGQSGTSG*LVHFLA
Trigger: GGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGA...CTGGCCCCTCAACCTAGTGTCCGTCCTCCTCTCTCCTGGAGCCAGTCTTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGTCTGGAACATCCGGATaGTTGGTTCATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLSGTSG*LVHFLA
Trigger: GGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGA...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACTCTGGAACATCCGGATaGTTGGTTCATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHSGTSG*LVHFLA
Trigger: GGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGA...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp CGTGGTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCCCATCAGCAGGGCTCTaGCGACCCATCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RGSSSHGPNGKIRKAGSAPSAGL*RPISVR
Trigger: CCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGG...GGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VALHMDQTGKSGKLVVPGMGPTP*SHRVAA
Trigger: GGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCAT...TCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTAGTTCACCTGGGGCCTaGCCACTTCCCGCATTGTCT +
Preference number: 4 (lower is better)
Translates to: LMLGLTHCQSEGHLLKNTSSPGA*PLPALS
Trigger: AGACAATGCGGGAAGTGGGCAGGCCCCAGGTGAACT...AGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRRELFGGA*LGLPLL
Trigger: GAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAG...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp TGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACCTTACTTGGCTTCTCTTCCACGTaGCTGGTCTGCTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CETPRSRVLGGLRQVTLLGFSST*LVCSRS
Trigger: GCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCC...AAGTAAGGTGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp TTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCCAGGGCAGCACCTCTaGCCTCTAAGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FGSSCSHAVCCETPRSRVPGQHL*PLRRKA
Trigger: GGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGG...CACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCAGGCCACACTCACTCTaGACCACCTGTTGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSRPHSL*TTCCSR
Trigger: CCGGGAACAACAGGTGGTCCAGAGTGAGTGTGGCCT...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp ATGCCCTACAAGCCTCCTGTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGAGCTGCTCCCAGAGATaGAGGGTGAGGAACAGACGT +
Preference number: 4 (lower is better)
Translates to: MPYKPPVAVFRKHARPFLSCSQR*RVRNRR
Trigger: ACGTCTGTTCCTCACCCTCCATCTCTGGGAGCAGCT...CAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCACAGGAGGCTTGTAGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PSSRHLPWIPALHSSFLESSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR TCA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVSSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR TCA 90 bp TGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CRPISVRLLFHVAGLLQKSSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...CTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp CCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACGCTGCAGCTCCTCTaGTTTCATCCACTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: PLMLGLTHCQSEGHLLKNTLQLL*FHPLVV
Trigger: TACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGT...GTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp CAGAAGCCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: QKPLMLGLTHCQSEGHLLGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...CAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCCCAGAGGGACAGAGCTaGTGGCCTGACGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCPEGQS*WPDALF
Trigger: GAAGAGAGCGTCAGGCCATCAGCTCTGTCCCTCTGG...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCCATCAGCAGGGCTCTaGCGACCCATCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTPSAGL*RPISVR
Trigger: CCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGG...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCCTCACACAGAGTGGCTaGCCACAAGGCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCLTQSG*PQGPAI
Trigger: GATGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAG...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGGAGCACTCTCCCAGTaGAGGGCTCTGGTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VPVVHMQSAVRLQDQGCWGALSQ*RALVFE
Trigger: TTCAAAGACCAGAGCCCTGCACTGGGAGAGTGCTCC...CCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAAGGGTCACACCAGCCTaGCTCTGCAGGACAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VALHMDQTGKSGKLVVPGRVTPA*LCRTRG
Trigger: TCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCT...TCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCGCCAGCTGCACTGCATaGCATACTCCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCASCTA*HTPAPG
Trigger: CCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGC...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTCTCTTCCACGTGGCTaGTCTGCTCCAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSSLPRG*SAPEAT
Trigger: AGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGA...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCCCAGGGCAGCACCTCTaGCCTCTAAGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCPGQHL*PLRRKA
Trigger: GGCCTTTCTCCTTAGAGGCCAGAGGTGCTGCCCTGG...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGCTCAAAGTGGATTTCATCCACTCGTaGTACCTGGGCACATGCTCC +
Preference number: 4 (lower is better)
Translates to: QSEGHLLKNTARSHLLKVDFIHS*YLGTCS
Trigger: GGAGCATGTGCCCAGGTACCACGAGTGGATGAAATC...CACTTTGAGCAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp CTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LTHCQSEGHLLKNTARSHRHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...GTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCGGTCTTCTAGATCTGTaGGGAAGAGGTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: SVRLLFHVAGLLQKPLMLGLLDL*GRGSHL
Trigger: GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACC...GAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACCTTACTTGCCACCTGCTCAAAGTaGAGTTTCTGGAACATCCGG +
Preference number: 4 (lower is better)
Translates to: CETPRSRVLGGLRQVTLLATCSK*SFWNIR
Trigger: CCGGATGTTCCAGAAACTTCACTTTGAGCAGGTGGC...AAGTAAGGTGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCGCCACCTGCTCAAAGTaGAGTTTCTGGAACATCCGG +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSATCSK*SFWNIR
Trigger: CCGGATGTTCCAGAAACTTCACTTTGAGCAGGTGGC...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp ACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGCACTCACTGTCAGTCTaGGGGTCACCTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: THCQSEGHLLKNTARSHLHSLSV*GSPPEK
Trigger: TTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTG...CAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCAGGGCTCTGGTCTTTaGAGTGTATGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTQGSGL*SVWAQH
Trigger: GTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTG...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCTTCCTCAGTGCCCCCTaGGCTTTATCAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCFLSAP*ALSAEG
Trigger: CCCCTCTGCTGATAAAGCTCAGGGGGCACTGAGGAA...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTATGTTTGTTTTATACTaGGGCATGTTTTCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GDSQPGPGALSQCRALVFMFVLY*GMFSVP
Trigger: TGGAACCGAAAACATGCCTCAGTATAAAACAAACAT...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357814.8
CDS-3UTR GCA 90 bp GGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: GLTHCQSEGHLLKNTARSEAVKR*SSSDFI
Trigger: GATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTC...GCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp GTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: VPVVHMQSAVRLQDQGCWLSASS*QLHCMA
Trigger: TGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAA...CCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGTGGAAGGAAACTGGGCCAACTCTACTTTGTAAGCCATAGGGTGCCAGGTAGCGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGRKLGQLYFVSHRVPGSEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...GCTACCTGGCACCCTATGGCTTACAAAGTAGAGTTGGCCCAGTTTCCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CCACTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACGAAGGTACACTTGTCTaGATCTTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLMLGLTHCQSEGHLLKNEGTLV*IFLPAA
Trigger: TGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTC...GTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR GCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATCACATCTCCCACCATaGAGCTCTCTTCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRSHLPP*SSLRWR
Trigger: GCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGA...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp AGCCACAAGGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCACGAGAACGGCCTCAGTaGCAAGGCCCTTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: SHKELYLTLMPLNSRLAPRERPQ*QGPYPC
Trigger: GCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCG...TGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCCTTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGATCTCCCATGGATCCCTaGCCTCCATTCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VALHMDQTGKSGKLVVPGSPMDP*PPFQLP
Trigger: AGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGA...TCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTGGTCAGACCTAGCGTaGTCACTCCGTAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSWSDLA*SLRKTA
Trigger: TGCTGTCTTACGGAGTGACCACGCTAGGTCTGACCA...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTAAAGCTGGTAGTGCCTaGAGCTTCACTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTKAGSA*SFTPSQ
Trigger: CTGGCTGGGAGTGAAGCTCCAGGCACTACCAGCTTT...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CCA 90 bp CCGCATTGTCTGCTCACACTTTCTTACCGTAAGACAGCATCGCGAGAACGGCCTTCCAGTGCGGGCACTTaGCAGACACCATCTCATTTA +
Preference number: 4 (lower is better)
Translates to: PHCLLTLSYRKTASRERPSSAGT*QTPSHL
Trigger: TAAATGAGATGGTGTCTGCCAAGTGCCCGCACTGGA...AGGCCGTTCTCGCGATGCTGTCTTACGGTAAGAAAGTGTGAGCAGACAATGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp ACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: THCQSEGHLLKNTARSHLSSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...CAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR TCA 90 bp TGTCTGCTCACACTTTCTTACCGTAAGACAGCATCGCGAGAACGGCCTCAGTGCAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CLLTLSYRKTASRERPQCSSKVF*FNLMVA
Trigger: TGCTACCATGAGGTTGAATCAGAACACCTTGCTGCT...GCACTGAGGCCGTTCTCGCGATGCTGTCTTACGGTAAGAAAGTGTGAGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp GTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAACGCTGCAGCTCCTCTaGTTTCATCCACTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: VALHMDQTGKSGKLVVPGTLQLL*FHPLVV
Trigger: TACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGT...TCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGTGGGCTCTGCAATCATaGCCTCGATCTCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRREWALQS*PRSPPR
Trigger: CCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCCA...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGCTCAAAGTGAAGTTTGCCACCTGCTCAAAGTaGAGTTTCTGGAACATCCGG +
Preference number: 4 (lower is better)
Translates to: EGHLLKNTARSHLLKVKFATCSK*SFWNIR
Trigger: CCGGATGTTCCAGAAACTTCACTTTGAGCAGGTGGC...AAACTTCACTTTGAGCAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp CGTGGTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCCACTCACTGTCAGTCTaGGGGTCACCTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: RGSSSHGPNGKIRKAGSAHSLSV*GSPPEK
Trigger: TTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTG...GGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTACCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp TGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACCTTACTTCACTCACTGTCAGTCTaGGGGTCACCTCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: CETPRSRVLGGLRQVTLLHSLSV*GSPPEK
Trigger: TTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTG...AAGTAAGGTGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATGCTCCAGAAGCCACTaGTGCTCGGACTCACTCACT +
Preference number: 4 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRCSRSH*CSDSLT
Trigger: AGTGAGTGAGTCCGAGCATCAGTGGCTTCTGGAGCA...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRRESCQLH*MAYSCS
Trigger: GGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGA...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTTGGTTCATTTCCTTaGCCAATTTTAGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLLGSFP*PILASN
Trigger: GTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAG...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR GCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGACACCAGCCTGCCTCTaGAGGACAAGAGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRRETPACL*RTRGPS
Trigger: GCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGT...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTCTCATGGAGTCAGTATaGTGCCTCATGGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: LMLGLTHCQSEGHLLKNTLMESV*CLMGIV
Trigger: GACTATCCCCATGAGGCAGCATACTGACTCCATGAG...AGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp ATGCCCTACAAGCCTCCTGTGGCTGTGTTTAGAAAGCATGCCCGGCCTTTCTTGCCTACAAGCCTCCTGTaGCTGTGTTTAGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: MPYKPPVAVFRKHARPFLPTSLL*LCLESM
Trigger: CATGCTTTCTAAACACAGCCACAGGAGGCTTGTAGG...CAAGAAAGGCCGGGCATGCTTTCTAAACACAGCCACAGGAGGCTTGTAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp AGCCACAAGGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAACACCAGCCTGCCTCTaGAGGACAAGAGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: SHKELYLTLMPLNSRLAPTPACL*RTRGPS
Trigger: GCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGT...TGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCCTTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp AGCCACAAGGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAAGGGTCACACCAGCCTaGCTCTGCAGGACAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SHKELYLTLMPLNSRLAPRVTPA*LCRTRG
Trigger: TCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCT...TGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCCTTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp ACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCCACCTGACTTCCCGCATTGTCTaGTCACACTTTCTTACCGTA +
Preference number: 4 (lower is better)
Translates to: THCQSEGHLLKNTARSHLTSRIV*SHFLTV
Trigger: TACGGTAAGAAAGTGTGAGCAGACAATGCGGGAAGT...CAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGATGGTCAGACCTAGCGTaGTCACTCCGTAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRWSDLA*SLRKTA
Trigger: TGCTGTCTTACGGAGTGACCACGCTAGGTCTGACCA...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
3UTR CAA 72 bp CTTGGTTCATTTCCTTGCCCAATTTTAGCCTCAAACTaGGTCAGACCTAGCGTGGTCACTCCTCGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGSFPCPILASN*VRPSVVTPRRG
Trigger: TCCTCTGCGAGGAGTGACCACGCTAGGTCTGACCAAGTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp CACCTGCTCAAAGTGAAGTTTCTGGAACATCCGGATGCTTGGTTCATTTCCTTGACGCTGCAGCTCCTCTaGTTTCATCCACTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: HLLKVKFLEHPDAWFISLTLQLL*FHPLVV
Trigger: TACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGT...CAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAACTTCACTTTGAGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR TCA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGACGGCATCCAGCACAATaGAGGTACACTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRRHPAQ*RYTCLH
Trigger: ATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCG...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRRELSASS*QLHCMA
Trigger: TGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAA...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp AGCCACAAGGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCACCTCTGCTTCCTCAGTaGCCCCTGAGCTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: SHKELYLTLMPLNSRLAPPLLPQ*PLSFIS
Trigger: GCTGATAAAGCTCAGGGGGCACTGAGGAAGCAGAGG...TGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCCTTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR TCA 90 bp GGAGCTGTATCTAACACTAATGCCTTTAAACTCAAGACTGGCTCCAGGAGAGAGACATGCAGTCTGCTGTaGGACTCCAAGATCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GAVSNTNAFKLKTGSRRETCSLL*DSKIKG
Trigger: ACCCTTGATCTTGGAGTCTCACAGCAGACTGCATGT...CTCTCTCCTGGAGCCAGTCTTGAGTTTAAAGGCATTAGTGTTAGATACAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR GCA 90 bp CACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTCCTTGGTTCATTTCCTTaGCCAATTTTAGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HMDQTGKSGKLVVPGASLLGSFP*PILASN
Trigger: GTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAG...GAGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS TCA 90 bp CCTCATGGTAGCAGCCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCCCGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PHGSSHRRNRPPQKG*STSSNQPRSQARPA
Trigger: AGCCGGCCGGGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGCTGCTACCATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577428.5
CDS TCA 90 bp ATGGTAGCAGCCTACCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCCCGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: MVAAYHRRNRPPQKG*STSSNQPRSQARPA
Trigger: AGCCGGCCGGGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGTAGGCTGCTACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357814.8
ENST00000578798.5
ENST00000582118.1
ENST00000582168.5
ENST00000582524.5
ENST00000582993.5
ENST00000583689.5
ENST00000584409.5
ENST00000585240.5
CDS TCA 90 bp ACTCGTGGTACCTACCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCCCGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: TRGTYHRRNRPPQKG*STSSNQPRSQARPA
Trigger: AGCCGGCCGGGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGTAGGTACCACGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583989.5
CDS GCA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTaGTCACACAGAGTGGCTGCCCACAAGGCCCAGCCATCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSAGLWSLKCMGPTP*SHRVAAHKAQPSAG
Trigger: CCCTGCTGATGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581762.1
ENST00000583834.5
CDS GCA 90 bp GTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGGCTaGCCACAAGGCCCAGCCATCAGCAGGGCTCTGCCGACCCATCTC +
Preference number: 5 (lower is better)
Translates to: VFEVYGPNTLLTQSG*PQGPAISRALPTHL
Trigger: GAGATGGGTCGGCAGAGCCCTGCTGATGGCTGGGCCTTGTGGGCAGCCACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581762.1
ENST00000582870.5
ENST00000583834.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCTGCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYLLGT
Trigger: TGTGCCCAGCAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578822.5
ENST00000578947.1
ENST00000581136.5
ENST00000582524.5
ENST00000582993.5
ENST00000583476.5
ENST00000583689.5
ENST00000584409.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCTGCTACCACCG +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYLLPP
Trigger: CGGTGGTAGCAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578862.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCTGGGCACATGC +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYLGTC
Trigger: GCATGTGCCCAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000579218.5
ENST00000580301.5
ENST00000580632.5
ENST00000582168.5
ENST00000582870.5
ENST00000583757.5
ENST00000583834.5
ENST00000584022.5
ENST00000585240.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCTACCACCGACG +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYLPPT
Trigger: CGTCGGTGGTAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583989.5
CDS-3UTR CAA 90 bp GGTGATTCCCAGCCTGGGCCAGGAGCACTCTCCCAGTGCAGGGCTCTGGTCTTTGCAGGGCTCTGGTCTTaGAAGTGTATGGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: GDSQPGPGALSQCRALVFAGLWS*KCMGPT
Trigger: TGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC...AAAGACCAGAGCCCTGCACTGGGAGAGTGCTCCTGGCCCAGGCTGGGAATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCCCATGTCAAGC +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYPMSS
Trigger: GCTTGACATGGGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578798.5
CDS CCA 90 bp AGGTTCACATCTCCCACCATGCAGCTCTCTTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCATCCAGCACAATGAAGGTACACTTG +
Preference number: 5 (lower is better)
Translates to: RFTSPTMQLSSVAPG*ACHFSASSTMKVHL
Trigger: CAAGTGTACCTTCATTGTGCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS CCA 90 bp GATGCAGTGGGTGGGGAAGAGGACAGAAGGGTCAGCCACAGGGACTaGCTTCAGGGCCATGAGAATACAGGAGTTCCAGCACCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: DAVGGEEDRRVSHRD*LQGHENTGVPAPSR
Trigger: CCTGGAAGGTGCTGGAACTCCTGTATTCTCATGGCCCTGAAGCCAGTCCCTGTGGCTGACCCTTCTGTCCTCTTCCCCACCCACTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582118.1
ENST00000582168.5
ENST00000582993.5
CDS-3UTR CAA 90 bp CAGCATCGCGAGAACGGCCTCAGTGCCAAGGCCCTTACCCCTGCAGCTGGGCTCATTTTAGCCTCAAACTaGGTCAGACCTAGCGTGGTC +
Preference number: 5 (lower is better)
Translates to: QHRENGLSAKALTPAAGLILASN*VRPSVV
Trigger: GACCACGCTAGGTCTGACCAAGTTTGAGGCTAAAAT...GAGCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CAA 90 bp GCTCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTACTCTGGACCACCTGTaGTTCCCGGGTCAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: APTFIPTSPMDPCPPFQLTLDHL*FPGQVP
Trigger: GGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGT...AAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGACTCTGGACCACCTGTaGTTCCCGGGTCAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLTLDHL*FPGQVP
Trigger: GGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGT...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp CAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCACATGCCCGGCCTTTCTaGACAGCCAGCCACCCCAGA +
Preference number: 5 (lower is better)
Translates to: QSAVRLQDQGCWEALGKSHARPF*TASHPR
Trigger: TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATG...TGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS TCA 90 bp TGGTACTCCTACCCAAGCCAGAGCACTGCAGAACACCAGCATCTCTaGGTCTGCCAGGAGAAGAGGGGGTCCCAGAGCTTCCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: WYSYPSQSTAEHQHL*VCQEKRGSQSFLQL
Trigger: GAGCTGAAGGAAGCTCTGGGACCCCCTCTTCTCCTGGCAGACTCAGAGATGCTGGTGTTCTGCAGTGCTCTGGCTTGGGTAGGAGTACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582168.5
CDS TCA 90 bp CTGGGCCTGCCACTTCTCGGCATCCAGCACAATGAAGGTACACTCTaGGGAGGAGGTGACAGGGCTATCACACACACTCCCCAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LGLPLLGIQHNEGTL*GGGDRAITHTPQRR
Trigger: TCTCCTCTGGGGAGTGTGTGTGATAGCCCTGTCACCTCCTCCTCAGAGTGTACCTTCATTGTGCTGGATGCCGAGAAGTGGCAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582168.5
CDS TCA 90 bp GTCAGCAGATCTGAGAGCCGGGAGTCAGCGGAAGGCAGGGCTAGGTaGAACAAACCTGCAATCATGACCTCGATCTCCCCCAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VSRSESRESAEGRAR*NKPAIMTSISPKVR
Trigger: CCTCACCTTGGGGGAGATCGAGGTCATGATTGCAGGTTTGTTTCACCTAGCCCTGCCTTCCGCTGACTCCCGGCTCTCAGATCTGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582359.5
ENST00000583689.5
CDS GCA 90 bp AGCACAATGAAGGTACACTTGTCTGCATCTTCCTGCCAGCTGCACTaGATGGCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: STMKVHLSASSCQLH*MAYSCSRVSGSEAV
Trigger: GACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCTCAACAAAGGC +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYLNKG
Trigger: GCCTTTGTTGAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582118.1
CDS CCA 90 bp GCTCTGGGTGCTGATACGCACCCCATGTCAAGCGGGAAAGATACCTaGGCACATGCTCCGAGGTGTAGGGTACAAGGACCACCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: ALGADTHPMSSGKDT*AHAPRCRVQGPPSS
Trigger: GGAAGAAGGTGGTCCTTGTACCCTACACCTCGGAGCATGTGCCCAGGTATCTTTCCCGCTTGACATGGGGTGCGTATCAGCACCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579837.1
CDS CCA 90 bp TTTTCACAAAGCTTCTATGGCCGGGGCTGGGAAAGGGAAGGAACCTaGAGACTGACTGTGGAGTCAGCCCTCCCAGTACCAGGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: FSQSFYGRGWEREGT*RLTVESALPVPGLG
Trigger: CCCTAGCCCTGGTACTGGGAGGGCTGACTCCACAGTCAGTCTCCAGGTTCCTTCCCTTTCCCAGCCCCGGCCATAGAAGCTTTGTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000582118.1
ENST00000582168.5
ENST00000582993.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACCTGACAAGAACA +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYLTRT
Trigger: TGTTCTTGTCAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580216.5
ENST00000581466.1
CDS GCA 90 bp CAGAGGAGAGAAGAGAGGATGGTACTCCTACCCAAGCCAGAGCACTaGAGAACACCAGCATCTCTGAGTCTGCCAGGAGAAGAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: QRREERMVLLPKPEH*RTPASLSLPGEEGV
Trigger: GACCCCCTCTTCTCCTGGCAGACTCAGAGATGCTGGTGTTCTGCAGTGCTCTGGCTTGGGTAGGAGTACCATCCTCTCTTCTCTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582168.5
CDS GCA 90 bp GCATACTCCTGCTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGCTaGAGCTCCTCTGATTTCATCCACTCGTGGTACACAAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: AYSCSRVSGSEAVKR*SSSDFIHSWYTRTA
Trigger: TGCTGTTCTTGTGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582359.5
CDS CCA 90 bp TTCCAGCACCTTCCAGGCTTTTCACAAAGCTTCTATGGCCGGGGCTaGGAAAGGGAAGGAACCTGGAGACTGACTGTGGAGTCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: FQHLPGFSQSFYGRG*EREGTWRLTVESAL
Trigger: GAGGGCTGACTCCACAGTCAGTCTCCAGGTTCCTTCCCTTTCCCAGCCCCGGCCATAGAAGCTTTGTGAAAAGCCTGGAAGGTGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000582118.1
ENST00000582168.5
ENST00000582993.5
CDS CCA 90 bp CCCCAAATGCTCTACTTTCTCCAAATCCTTCCAAGCCCGATGCAGTaGGTGGGGAAGAGGACAGAAGGGTCAGCCACAGGGACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PQMLYFLQILPSPMQ*VGKRTEGSATGTGF
Trigger: GAAGCCAGTCCCTGTGGCTGACCCTTCTGTCCTCTTCCCCACCCACTGCATCGGGCTTGGAAGGATTTGGAGAAAGTAGAGCATTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582168.5
ENST00000582993.5
CDS-3UTR CAA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGGCAGGGCTCTGGTCTTaGAAGTGTATGGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: PSSRHLPWIPALHSSFLEAGLWS*KCMGPT
Trigger: TGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CAA 90 bp CCCATCTCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGCTCCAGTGCGGGCACTaGGCAGACACCATCTCATTT +
Preference number: 5 (lower is better)
Translates to: PISVRLLFHVAGLLQKPLLQCGH*ADTISF
Trigger: AAATGAGATGGTGTCTGCCAAGTGCCCGCACTGGAG...CAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS GCA 90 bp AGGGACATGAGGGGCAGGGCCTCAATTTACAGCCAGAGCCCCAAATaGTCTACTTTCTCCAAATCCTTCCAAGCCCGATGCAGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RDMRGRASIYSQSPK*STFSKSFQARCSGW
Trigger: CCACCCACTGCATCGGGCTTGGAAGGATTTGGAGAAAGTAGAGCATTTGGGGCTCTGGCTGTAAATTGAGGCCCTGCCCCTCATGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582168.5
CDS-3UTR CAA 90 bp GCACTCTCCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGGGAACATCCGGATGCTaGGTTCATTTCCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: ALSQCRALVFEVYGPNTLGTSGC*VHFLAQ
Trigger: TTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCC...CAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGGAGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CAA 90 bp TCCCACCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCGGAACATCCGGATGCTaGGTTCATTTCCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: SHLHPDISHGSLPSIPASGTSGC*VHFLAQ
Trigger: TTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCC...GGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CAA 90 bp CAGGGTCACACCAGCCTGCCTCTGCAGGACAAGAGGACCAAGCTGCCCTTGAGTTGTTTTCGGTTCCAGTaGTTCACATGCAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGHTSLPLQDKRTKLPLSCFRFQ*FTCSLL
Trigger: CAGCAGACTGCATGTGAACAACTGGAACCGAAAACA...ACTCAAGGGCAGCTTGGTCCTCTTGTCCTGCAGAGGCAGGCTGGTGTGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS CCA 90 bp TCCAGAAGGGGATGTATATGGCAAGCCAACCTCAACAAAGGCGGCTaGACAGATCCCACGAAGTTAGGGCACCAGGAACCCTCAAACGGA +
Preference number: 5 (lower is better)
Translates to: SRRGCIWQANLNKGG*TDPTKLGHQEPSNG
Trigger: TCCGTTTGAGGGTTCCTGGTGCCCTAACTTCGTGGGATCTGTCCAGCCGCCTTTGTTGAGGTTGGCTTGCCATATACATCCCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580216.5
ENST00000581466.1
CDS CCA 90 bp GATTTCATCCACTCGTGGTACCCCATGTCAAGCGGGAAAGATACCTaGGCACATGCTCCGAGGTGTAGGGTACAAGGACCACCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: DFIHSWYPMSSGKDT*AHAPRCRVQGPPSS
Trigger: GGAAGAAGGTGGTCCTTGTACCCTACACCTCGGAGCATGTGCCCAGGTATCTTTCCCGCTTGACATGGGGTACCACGAGTGGATGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578798.5
CDS-3UTR CAA 90 bp TCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGTCTGGGACAATGAAGGTACACTaGTCTGCATCTTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SRHLPWIPALHSSFLESGTMKVH*SASSCQ
Trigger: CTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGT...CCCAGACTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000581136.5
CDS-3UTR CAA 90 bp CACACTCACTCTGGACCACCTGTTGTTCCCGGGTCAAGTTCCCAGGGTCACACCATTTTAGCCTCAAACTaGGTCAGACCTAGCGTGGTC +
Preference number: 5 (lower is better)
Translates to: HTHSGPPVVPGSSSQGHTILASN*VRPSVV
Trigger: GACCACGCTAGGTCTGACCAAGTTTGAGGCTAAAAT...GGTGTGACCCTGGGAACTTGACCCGGGAACAACAGGTGGTCCAGAGTGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS CCA 90 bp AGGATAATTAAACAATCCTTGACTCCCACTCCAAGAGGCCAAGCCTaGGCTCCGTTTCTGCCGGTTCCTTCCGTCCACTCCCCAGAACTT +
Preference number: 5 (lower is better)
Translates to: RIIKQSLTPTPRGQA*APFLPVPSVHSPEL
Trigger: AAGTTCTGGGGAGTGGACGGAAGGAACCGGCAGAAACGGAGCCCAGGCTTGGCCTCTTGGAGTGGGAGTCAAGGATTGTTTAATTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581451.1
CDS-3UTR CAA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGACAATGAAGGTACACTaGTCTGCATCTTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVTMKVH*SASSCQ
Trigger: CTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGT...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CAA 90 bp GTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCGGAACAATGAAGGTACACTaGTCTGCATCTTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VRLLFHVAGLLQKPLMLGTMKVH*SASSCQ
Trigger: CTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGT...TCCGAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583757.5
ENST00000584022.5
CDS-3UTR CAA 90 bp CCTTCATCCCGACATCTCCCATGGATCCCTGCCCTCCATTCCAGCTTCCTAGAGATTTTAGCCTCAAACTaGGTCAGACCTAGCGTGGTC +
Preference number: 5 (lower is better)
Translates to: PSSRHLPWIPALHSSFLEILASN*VRPSVV
Trigger: GACCACGCTAGGTCTGACCAAGTTTGAGGCTAAAAT...CTCTAGGAAGCTGGAATGGAGGGCAGGGATCCATGGGAGATGTCGGGATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGATTTTAGCCTCAAACTaGGTCAGACCTAGCGTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVILASN*VRPSVV
Trigger: GACCACGCTAGGTCTGACCAAGTTTGAGGCTAAAAT...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
CDS-3UTR CAA 90 bp GCCATCAGCAGGGCTCTGCCGACCCATCTCTGTAAGGCTTCTCTTCCACGTGGCGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: AISRALPTHLCKASLPRGAWFIS*PNFSLK
Trigger: TTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGC...GCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCTGCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CAA 90 bp TCTGTAAGGCTTCTCTTCCACGTGGCTGGTCTGCTCCAGAAGCCACTGATGCTCATAGTCAGTAGCCACTaGGGGGAAACTGAGGACCAT +
Preference number: 5 (lower is better)
Translates to: SVRLLFHVAGLLQKPLMLIVSSH*GETEDH
Trigger: ATGGTCCTCAGTTTCCCCCAAGTGGCTACTGACTAT...GAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CAA 90 bp CCCAGTGCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: PSAGLWSLKCMGPTPCSHAWFIS*PNFSLK
Trigger: TTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGC...GTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CAA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTGCAGGGCTCTGGTCTTaGAAGTGTATGGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTAGLWS*KCMGPT
Trigger: TGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp TTTATACTGAGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGCATGCCCGGCCTTTCTaGACAGCCAGCCACCCCAGA +
Preference number: 5 (lower is better)
Translates to: FILRHVFGSSCSHAVCCEHARPF*TASHPR
Trigger: TCTGGGGTGGCTGGCTGTCAAGAAAGGCCGGGCATG...CTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCTCAGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357814.8
CDS-3UTR CAA 90 bp CTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTTGCCCACTTCCCGCATaGTCTGCTCACACTTTCTTA +
Preference number: 5 (lower is better)
Translates to: LGLTHCQSEGHLLKNTARCPLPA*SAHTFL
Trigger: TAAGAAAGTGTGAGCAGACAATGCGGGAAGTGGGCA...ACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CAA 90 bp GGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGCTCGTAGCACAATGAAGGTACACTaGTCTGCATCTTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GLTHCQSEGHLLKNTARSTMKVH*SASSCQ
Trigger: CTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGT...GCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583476.5
ENST00000584022.5
CDS-3UTR CAA 90 bp GCAGGGCTCTGGTCTTTGAAGTGTATGGGCCCAACACCCTGCTCACACAGAGTGGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: AGLWSLKCMGPTPCSHRVAWFIS*PNFSLK
Trigger: TTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGC...CACTCTGTGTGAGCAGGGTGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357814.8
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
CDS-3UTR CAA 90 bp AGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCGGAACATCCGGATGCTaGGTTCATTTCCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: SSSHGPNGKIRKAGSAWSGTSGC*VHFLAQ
Trigger: TTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCC...GCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp CTGATGCTCGGACTCACTCACTGTCAGTCTGAGGGTCACCTCCTGAAAAACACTGGAACATCCGGATGCTaGGTTCATTTCCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: LMLGLTHCQSEGHLLKNTGTSGC*VHFLAQ
Trigger: TTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCC...AGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS-3UTR CAA 90 bp AGGCATGTTTTCGGTTCCAGTTGTTCACATGCAGTCTGCTGTGAGACTCCAAGAGCAGGGCTCTGGTCTTaGAAGTGTATGGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: RHVFGSSCSHAVCCETPRAGLWS*KCMGPT
Trigger: TGTTGGGCCCATACACTTCAAAGACCAGAGCCCTGC...TCTTGGAGTCTCACAGCAGACTGCATGTGAACAACTGGAACCGAAAACATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp CAGTCTGCTGTGAGACTCCAAGATCAAGGGTGCTGGGAGGCCTTAGGCAAGTCAGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: QSAVRLQDQGCWEALGKSAWFIS*PNFSLK
Trigger: TTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGC...TGACTTGCCTAAGGCCTCCCAGCACCCTTGATCTTGGAGTCTCACAGCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS TCA 90 bp CTCCAACTTTGGGTAGGCGCTCCAGCTTTCCTGCTGGGGCTAAGTTaGCTTCCGTCATTAGTTCCGTCTAGACACTTCAAAGAATACAGA +
Preference number: 5 (lower is better)
Translates to: LQLWVGAPAFLLGLS*LPSLVPSRHFKEYR
Trigger: TCTGTATTCTTTGAAGTGTCTAGACGGAACTAATGACGGAAGTCAACTTAGCCCCAGCAGGAAAGCTGGAGCGCCTACCCAAAGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578822.5
ENST00000581451.1
ENST00000582870.5
CDS-3UTR CAA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCGGAACATCCGGATGCTaGGTTCATTTCCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCGTSGC*VHFLAQ
Trigger: TTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCC...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS-3UTR CAA 90 bp TCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTCACTTGTTTTCGGTTCCAGTaGTTCACATGCAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHGPNGKIRKAGSAWSFTCFRFQ*FTCSLL
Trigger: CAGCAGACTGCATGTGAACAACTGGAACCGAAAACA...AGTGAAGCTCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS GCA 90 bp TCTGAAGTTGCTACTATCATTACCATTCTCATGGAGTCAGTATGCTaGCTCATGGGGATAGTCAGTAGCCACTTGGGGGAAACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SEVATIITILMESVC*LMGIVSSHLGETED
Trigger: GTCCTCAGTTTCCCCCAAGTGGCTACTGACTATCCCCATGAGGCAGCATACTGACTCCATGAGAATGGTAATGATAGTAGCAACTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS CCA 90 bp CAGTCTGAAACCAAACATTCTTCAAATTCCAGAAGGGGATGTATATaGCAAGCCAACCTCAACAAAGGCGGCTGGACAGATCCCACGAAG +
Preference number: 5 (lower is better)
Translates to: QSETKHSSNSRRGCI*QANLNKGGWTDPTK
Trigger: CTTCGTGGGATCTGTCCAGCCGCCTTTGTTGAGGTTGGCTTGCCATATACATCCCCTTCTGGAATTTGAAGAATGTTTGGTTTCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580216.5
ENST00000581466.1
CDS-3UTR CAA 90 bp GCCTTAGGCAAGTCACCTTACTTATCTAAGACTGTTTCCCCACCTGGAAGATGCACAATGAAGGTACACTaGTCTGCATCTTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ALGKSPYLSKTVSPPGRCTMKVH*SASSCQ
Trigger: CTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGT...GCATCTTCCAGGTGGGGAAACAGTCTTAGATAAGTAAGGTGACTTGCCTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS TCA 90 bp TGTCCAATTTCCTATCCTGTCTCGGGTCAGTGCGGAGGAGCAGTCTaGAACCAAACATTCTTCAAATTCCAGAAGGGGATGTATATGGCA +
Preference number: 5 (lower is better)
Translates to: CPISYPVSGQCGGAV*NQTFFKFQKGMYMA
Trigger: TGCCATATACATCCCCTTCTGGAATTTGAAGAATGTTTGGTTTCAGACTGCTCCTCCGCACTGACCCGAGACAGGATAGGAAATTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580216.5
ENST00000581466.1
CDS-3UTR CAA 90 bp GTAGCTCTTCACATGGACCAAACGGGAAAATCAGGAAAGCTGGTAGTGCCTGGAGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: VALHMDQTGKSGKLVVPGAWFIS*PNFSLK
Trigger: TTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGC...TCCAGGCACTACCAGCTTTCCTGATTTTCCCGTTTGGTCCATGTGAAGAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357814.8
ENST00000580301.5
CDS CCA 90 bp CAAAGAATACAGACTCCAAAATTCTTGCAAGAAAGAGAACCAGGCTaGTTAAGGATAATTAAACAATCCTTGACTCCCACTCCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: QRIQTPKFLQEREPG*LRIIKQSLTPTPRG
Trigger: GCCTCTTGGAGTGGGAGTCAAGGATTGTTTAATTATCCTTAACCAGCCTGGTTCTCTTTCTTGCAAGAATTTTGGAGTCTGTATTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581451.1
CDS CAA 90 bp CTCACCACATGGAGCCTCCCAGTGAACCCTGTGAGTGCCCACCCTTaGCAGCCTCGGCAGGCTCAGTCAGCAGATCTGAGAGCCGGGAGT +
Preference number: 6 (lower is better)
Translates to: LTTWSLPVNPVSAHP*QPRQAQSADLRAGS
Trigger: ACTCCCGGCTCTCAGATCTGCTGACTGAGCCTGCCGAGGCTGCAAAGGGTGGGCACTCACAGGGTTCACTGGGAGGCTCCATGTGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582359.5
CDS TCA 72 bp GCCTACCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: AYHRRNRPPQKG*STSSNQPRSQA
Trigger: GGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGTAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000357814.8
ENST00000578798.5
ENST00000579837.1
ENST00000580301.5
ENST00000582118.1
ENST00000582168.5
ENST00000582524.5
ENST00000582993.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000584409.5
ENST00000585240.5
CDS TCA 72 bp AGCAGCCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SSHRRNRPPQKG*STSSNQPRSQA
Trigger: GGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577428.5
CDS GCA 72 bp GCATCTTCCTGCCAGCTGCACTGCATGGCATACTCCTaGTCCAGGGTCAGCGGCTCCGAGGCTGTCAAACGC +
Preference number: 6 (lower is better)
Translates to: ASSCQLHCMAYS*SRVSGSEAVKR
Trigger: GCGTTTGACAGCCTCGGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582118.1
ENST00000582168.5
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000582993.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS CCA 72 bp TCTCCCACCATGCAGCTCTCTTCGGTGGCGCCTGGCTaGGCCTGCCACTTCTCGGCATCCAGCACAATGAAG +
Preference number: 6 (lower is better)
Translates to: SPTMQLSSVAPG*ACHFSASSTMK
Trigger: CTTCATTGTGCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCATGGTGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS CCA 72 bp CACATCTCCCACCATGCAGCTCTCTTCGGTGGCGCCTaGCTGGGCCTGCCACTTCTCGGCATCCAGCACAAT +
Preference number: 6 (lower is better)
Translates to: HISHHAALFGGA*LGLPLLGIQHN
Trigger: ATTGTGCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS TCA 72 bp TGCTACCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: CYHRRNRPPQKG*STSSNQPRSQA
Trigger: GGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGTAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578862.5
CDS TCA 72 bp ACCTACCACCGACGAAATCGTCCCCCGCAGAAAGGGTaGTCTACCTCCTCCAACCAGCCACGTTCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: TYHRRNRPPQKG*STSSNQPRSQA
Trigger: GGCCTGGGAACGTGGCTGGTTGGAGGAGGTAGATCACCCTTTCTGCGGGGGACGATTTCGTCGGTGGTAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583989.5
CDS GCA 72 bp ACAGGAGCGGCGCTGACGCCGTGTGCCAGGCTCCAGTaGGGGCACTTGGCAGACACCATCTCATTTAATTCT +
Preference number: 6 (lower is better)
Translates to: TGAALTPCARLQ*GHLADTISFNS
Trigger: AGAATTAAATGAGATGGTGTCTGCCAAGTGCCCGCACTGGAGCCTGGCACACGGCGTCAGCGCCGCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577428.5
ENST00000578862.5
ENST00000581762.1
ENST00000583989.5
ENST00000584022.5
CDS CCA 72 bp AGCTTCTATGGCCGGGGCTGGGAAAGGGAAGGAACCTaGAGACTGACTGTGGAGTCAGCCCTCCCAGTACCA +
Preference number: 6 (lower is better)
Translates to: SFYGRGWEREGT*RLTVESALPVP
Trigger: TGGTACTGGGAGGGCTGACTCCACAGTCAGTCTCCAGGTTCCTTCCCTTTCCCAGCCCCGGCCATAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582118.1
ENST00000582168.5
ENST00000582993.5
CDS TCA 72 bp CTGGCTGGGCCTGCCACTTCTCGGCATCCAGCACAATaGAGGTACACTTGTCTGCATCTTCCTGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LAGPATSRHPAQ*RYTCLHLPASC
Trigger: GCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGTGCTGGATGCCGAGAAGTGGCAGGCCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS TCA 72 bp TCTGAGAGCCGGGAGTCAGCGGAAGGCAGGGCTAGGTaGAACAAACCTGCAATCATGACCTCGATCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SESRESAEGRAR*NKPAIMTSISP
Trigger: GGGGGAGATCGAGGTCATGATTGCAGGTTTGTTTCACCTAGCCCTGCCTTCCGCTGACTCCCGGCTCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582359.5
ENST00000583689.5
CDS CCA 72 bp GGTGGGGAAGAGGACAGAAGGGTCAGCCACAGGGACTaGCTTCAGGGCCATGAGAATACAGGAGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GGEEDRRVSHRD*LQGHENTGVPA
Trigger: TGCTGGAACTCCTGTATTCTCATGGCCCTGAAGCCAGTCCCTGTGGCTGACCCTTCTGTCCTCTTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582118.1
ENST00000582168.5
ENST00000582993.5
CDS CCA 72 bp GCTGATACGCACCCCATGTCAAGCGGGAAAGATACCTaGGCACATGCTCCGAGGTGTAGGGTACAAGGACCA +
Preference number: 6 (lower is better)
Translates to: ADTHPMSSGKDT*AHAPRCRVQGP
Trigger: TGGTCCTTGTACCCTACACCTCGGAGCATGTGCCCAGGTATCTTTCCCGCTTGACATGGGGTGCGTATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579837.1
CDS CCA 72 bp CACTCGTGGTACCCCATGTCAAGCGGGAAAGATACCTaGGCACATGCTCCGAGGTGTAGGGTACAAGGACCA +
Preference number: 6 (lower is better)
Translates to: HSWYPMSSGKDT*AHAPRCRVQGP
Trigger: TGGTCCTTGTACCCTACACCTCGGAGCATGTGCCCAGGTATCTTTCCCGCTTGACATGGGGTACCACGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578798.5
CDS TCA 72 bp ACAAGGACCACCTTCTTCCCCAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCAGCCCCAGTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: TRTTFFPSSKVF*FNLMVAAPVQG
Trigger: TCCCTGGACTGGGGCTGCTACCATGAGGTTGAATCAGAACACCTTGCTGCTGGGGAAGAAGGTGGTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578947.1
CDS GCA 72 bp TCTATCTGTCCAATTTCCTATCCTGTCTCGGGTCAGTaGGGAGGAGCAGTCTGGGCACATGCTCCGAGGTGT +
Preference number: 6 (lower is better)
Translates to: SICPISYPVSGQ*GGAVWAHAPRC
Trigger: ACACCTCGGAGCATGTGCCCAGACTGCTCCTCCGCACTGACCCGAGACAGGATAGGAAATTGGACAGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582359.5
CDS CCA 72 bp GGATGTATATGGCAAGCCAACCTCAACAAAGGCGGCTaGACAGATCCCACGAAGTTAGGGCACCAGGAACCC +
Preference number: 6 (lower is better)
Translates to: GCIWQANLNKGG*TDPTKLGHQEP
Trigger: GGGTTCCTGGTGCCCTAACTTCGTGGGATCTGTCCAGCCGCCTTTGTTGAGGTTGGCTTGCCATATACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580216.5
ENST00000581466.1
CDS CCA 72 bp CTTCCAGGCTTTTCACAAAGCTTCTATGGCCGGGGCTaGGAAAGGGAAGGAACCTGGAGACTGACTGTGGAG +
Preference number: 6 (lower is better)
Translates to: LPGFSQSFYGRG*EREGTWRLTVE
Trigger: CTCCACAGTCAGTCTCCAGGTTCCTTCCCTTTCCCAGCCCCGGCCATAGAAGCTTTGTGAAAAGCCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000582118.1
ENST00000582168.5
ENST00000582993.5
CDS CCA 72 bp GATTTCATCCACTCGTGGTACCTCAACAAAGGCGGCTaGACAGATCCCACGAAGTTAGGGCACCAGGAACCC +
Preference number: 6 (lower is better)
Translates to: DFIHSWYLNKGG*TDPTKLGHQEP
Trigger: GGGTTCCTGGTGCCCTAACTTCGTGGGATCTGTCCAGCCGCCTTTGTTGAGGTACCACGAGTGGATGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582118.1
CDS TCA 72 bp ACAAGGACCACCTTCTTCCCCAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCAGCCTACCACCGACGA +
Preference number: 6 (lower is better)
Translates to: TRTTFFPSSKVF*FNLMVAAYHRR
Trigger: TCGTCGGTGGTAGGCTGCTACCATGAGGTTGAATCAGAACACCTTGCTGCTGGGGAAGAAGGTGGTCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000357814.8
ENST00000578798.5
ENST00000579837.1
ENST00000580216.5
ENST00000580301.5
ENST00000581136.5
ENST00000582118.1
ENST00000582168.5
ENST00000582359.5
ENST00000582524.5
ENST00000582993.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS GCA 72 bp TCCAGCACAATGAAGGTACACTTGTCTGCATCTTCCTaGCAGCTGCACTGCATGGCATACTCCTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSTMKVHLSASS*QLHCMAYSCSR
Trigger: CCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGTGCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000357814.8
ENST00000577428.5
ENST00000578798.5
ENST00000578822.5
ENST00000578862.5
ENST00000578947.1
ENST00000579218.5
ENST00000580216.5
ENST00000580301.5
ENST00000580632.5
ENST00000581136.5
ENST00000581466.1
ENST00000582359.5
ENST00000582524.5
ENST00000582870.5
ENST00000583476.5
ENST00000583689.5
ENST00000583757.5
ENST00000583834.5
ENST00000583989.5
ENST00000584022.5
ENST00000584409.5
ENST00000585240.5
CDS GCA 72 bp GAAGAGAGGATGGTACTCCTACCCAAGCCAGAGCACTaGAGAACACCAGCATCTCTGAGTCTGCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: EERMVLLPKPEH*RTPASLSLPGE
Trigger: TTCTCCTGGCAGACTCAGAGATGCTGGTGTTCTGCAGTGCTCTGGCTTGGGTAGGAGTACCATCCTCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582168.5
CDS CAA 90 bp AGATGGGGAGAGCAAAGACTTCAGGACCCTGAATTTCCTCCAACTTaGGGTAGGCGCTCCAGCTTTCCTGCTGGGGCTAAGTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: RWGEQRLQDPEFPPT*GRRSSFPAGAKLTS
Trigger: GGAAGTCAACTTAGCCCCAGCAGGAAAGCTGGAGCGCCTACCCAAAGTTGGAGGAAATTCAGGGTCCTGAAGTCTTTGCTCTCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578822.5
ENST00000581451.1
ENST00000582870.5
CDS TCA 72 bp ACAAGGACCACCTTCTTCCCCAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCAGCCACCGACGAAATC +
Preference number: 6 (lower is better)
Translates to: TRTTFFPSSKVF*FNLMVAATDEI
Trigger: GATTTCGTCGGTGGCTGCTACCATGAGGTTGAATCAGAACACCTTGCTGCTGGGGAAGAAGGTGGTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577428.5
CDS TCA 72 bp ACAAGGACCACCTTCTTCCCCAGCAGCAAGGTGTTCTaGTTCAACCTCATGGTAGCAGCCTGCATGCAGATG +
Preference number: 6 (lower is better)
Translates to: TRTTFFPSSKVF*FNLMVAACMQM
Trigger: CATCTGCATGCAGGCTGCTACCATGAGGTTGAATCAGAACACCTTGCTGCTGGGGAAGAAGGTGGTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578822.5
ENST00000581451.1
ENST00000582870.5
CDS TCA 72 bp TGGGTAGGCGCTCCAGCTTTCCTGCTGGGGCTAAGTTaGCTTCCGTCATTAGTTCCGTCTAGACACTTCAAA +
Preference number: 6 (lower is better)
Translates to: WVGAPAFLLGLS*LPSLVPSRHFK
Trigger: TTTGAAGTGTCTAGACGGAACTAATGACGGAAGTCAACTTAGCCCCAGCAGGAAAGCTGGAGCGCCTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578822.5
ENST00000581451.1
ENST00000582870.5
CDS CAA 72 bp AGAGAACCAGGCTGGTTAAGGATAATTAAACAATCCTaGACTCCCACTCCAAGAGGCCAAGCCTGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: REPGWLRIIKQS*TPTPRGQAWAP
Trigger: CGGAGCCCAGGCTTGGCCTCTTGGAGTGGGAGTCAAGGATTGTTTAATTATCCTTAACCAGCCTGGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581451.1
CDS CAA 90 bp TTGCAAGAAAGAGAACCAGGCTGGTTAAGGATAATTAAACAATCCTaGACTCCCACTCCAAGAGGCCAAGCCTGGGCTCCGTTTCTGCCG +
Preference number: 6 (lower is better)
Translates to: LQEREPGWLRIIKQS*TPTPRGQAWAPFLP
Trigger: CGGCAGAAACGGAGCCCAGGCTTGGCCTCTTGGAGTGGGAGTCAAGGATTGTTTAATTATCCTTAACCAGCCTGGTTCTCTTTCTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581451.1
CDS TCA 72 bp TCCTATCCTGTCTCGGGTCAGTGCGGAGGAGCAGTCTaGAACCAAACATTCTTCAAATTCCAGAAGGGGATG +
Preference number: 6 (lower is better)
Translates to: SYPVSGQCGGAV*NQTFFKFQKGM
Trigger: CATCCCCTTCTGGAATTTGAAGAATGTTTGGTTTCAGACTGCTCCTCCGCACTGACCCGAGACAGGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580216.5
ENST00000581466.1
CDS GCA 72 bp GCTACTATCATTACCATTCTCATGGAGTCAGTATGCTaGCTCATGGGGATAGTCAGTAGCCACTTGGGGGAA +
Preference number: 6 (lower is better)
Translates to: ATIITILMESVC*LMGIVSSHLGE
Trigger: TTCCCCCAAGTGGCTACTGACTATCCCCATGAGGCAGCATACTGACTCCATGAGAATGGTAATGATAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS GCA 72 bp GTTGCTACTATCATTACCATTCTCATGGAGTCAGTATaGTGCCTCATGGGGATAGTCAGTAGCCACTTGGGG +
Preference number: 6 (lower is better)
Translates to: VATIITILMESV*CLMGIVSSHLG
Trigger: CCCCAAGTGGCTACTGACTATCCCCATGAGGCAGCATACTGACTCCATGAGAATGGTAATGATAGTAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584022.5
CDS GCA 72 bp TCAACAACTCTGAAGTTGCTACTATCATTACCATTCTaGAATCATGACCTCGATCTCCCCCAAGGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: STTLKLLLSLPF*NHDLDLPQGEV
Trigger: GACCTCACCTTGGGGGAGATCGAGGTCATGATTGCAGAATGGTAATGATAGTAGCAACTTCAGAGTTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577428.5
ENST00000578862.5
ENST00000583989.5
ENST00000584409.5
CDS CAA 90 bp CTCAAAGTGAAGTTTCTGGAACATCCGGATGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAACTTGGTCAGACCGTAAGACAGCAT +
Preference number: 6 (lower is better)
Translates to: LKVKFLEHPDAWFIS*PNFSLKLGQTVRQH
Trigger: ATGCTGTCTTACGGTCTGACCAAGTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAACTTCACTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581136.5
CDS CAA 72 bp AAGTTTCTGGAACATCCGGATGCTTGGTTCATTTCCTaGCCCAATTTTAGCCTCAAACTTGGTCAGACCGTA +
Preference number: 6 (lower is better)
Translates to: KFLEHPDAWFIS*PNFSLKLGQTV
Trigger: TACGGTCTGACCAAGTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581136.5
CDS CCA 72 bp CAGACTCCAAAATTCTTGCAAGAAAGAGAACCAGGCTaGTTAAGGATAATTAAACAATCCTTGACTCCCACT +
Preference number: 6 (lower is better)
Translates to: QTPKFLQEREPG*LRIIKQSLTPT
Trigger: AGTGGGAGTCAAGGATTGTTTAATTATCCTTAACCAGCCTGGTTCTCTTTCTTGCAAGAATTTTGGAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581451.1