RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAT8L (Homo sapiens)

Ensembl gene IDs: ENSG00000185818

Ensembl transcript IDs: ENST00000423729.3

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGCCGGGCCACACCCTCGGCATGCGCGGAGCAAAGCAGCGCCGTaGCCAGCTGGGGCCTCCACAGGCAGTGGCGCTGGGGCCGCAGGC +
Preference number: 1 (lower is better)
Translates to: SAGPHPRHARSKAAP*PAGASTGSGAGAAG
Trigger: GCCTGCGGCCCCAGCGCCACTGCCTGTGGAGGCCCCAGCTGGCCACGGCGCTGCTTTGCTCCGCGCATGCCGAGGGTGTGGCCCGGCTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp AACACAGGGTGCGCGACTGCAGCGCCAGCCCACGGGGGATGGCAGTaGGCTCCCTTGGCGCAGGGGCAACTGTCCCACCGTCCCTCGGGC +
Preference number: 1 (lower is better)
Translates to: NTGCATAAPAHGGWQ*APLAQGQLSHRPSG
Trigger: GCCCGAGGGACGGTGGGACAGTTGCCCCTGCGCCAAGGGAGCCCACTGCCATCCCCCGTGGGCTGGCGCTGCAGTCGCGCACCCTGTGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp GCAGGCAACACAGGGTGCGCGACTGCAGCGCCAGCCCACGGGGGATaGCAGTGGGCTCCCTTGGCGCAGGGGCAACTGTCCCACCGTCCC +
Preference number: 1 (lower is better)
Translates to: AGNTGCATAAPAHGG*QWAPLAQGQLSHRP
Trigger: GGGACGGTGGGACAGTTGCCCCTGCGCCAAGGGAGCCCACTGCCATCCCCCGTGGGCTGGCGCTGCAGTCGCGCACCCTGTGTTGCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 90 bp GGCGGCGGGCAGGGCAGCGTCATGGACAGCCGCGGTGGTCCAAGATaGCACTCTTCAGGTGGCAAGCCGCCCAGGCAGGTGGGGAAGGGC +
Preference number: 1 (lower is better)
Translates to: GGGQGSVMDSRGGPR*HSSGGKPPRQVGKG
Trigger: GCCCTTCCCCACCTGCCTGGGCGGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTGCCCTGCCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp GGGGCCGGAGCCAGAGAAATGGAGGGCGTCAGAGCAAAGCAGGTGTaGACAGAGCCGGGCGGCGCGGGGCAGACCAGGCCCTCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: GAGAREMEGVRAKQV*TEPGGAGQTRPSRR
Trigger: CCTCCTGGAGGGCCTGGTCTGCCCCGCGCCGCCCGGCTCTGTCCACACCTGCTTTGCTCTGACGCCCTCCATTTCTCTGGCTCCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp AGGGCAGCCCCTGCCTGTGACCTCAGGAAGGAGAGACCAGGAGCATaGCCAGCGGAAGCCGAGGCGGCCACCCCTCTTCCCACCCAGCCC +
Preference number: 1 (lower is better)
Translates to: RAAPACDLRKERPGA*PAEAEAATPLPTQP
Trigger: GGGCTGGGTGGGAAGAGGGGTGGCCGCCTCGGCTTCCGCTGGCCATGCTCCTGGTCTCTCCTTCCTGAGGTCACAGGCAGGGGCTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 90 bp GGCAGCTTCAGCACAAGCAGGCCTCCCACCCTCAGGGACCAGGTCTaGAGCGACTCACACCTGGGCAGTGGCAGCTGCCTGGGGCCACCC +
Preference number: 1 (lower is better)
Translates to: GSFSTSRPPTLRDQV*SDSHLGSGSCLGPP
Trigger: GGGTGGCCCCAGGCAGCTGCCACTGCCCAGGTGTGAGTCGCTGCAGACCTGGTCCCTGAGGGTGGGAGGCCTGCTTGTGCTGAAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp CTTCCCCAGTGGCGGCGGGCAGGGCAGCGTCATGGACAGCCGCGGTaGTCCAAGATGCCACTCTTCAGGTGGCAAGCCGCCCAGGCAGGT +
Preference number: 1 (lower is better)
Translates to: LPQWRRAGQRHGQPR*SKMPLFRWQAAQAG
Trigger: ACCTGCCTGGGCGGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTGCCCTGCCCGCCGCCACTGGGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp GGCCCCGGGATCTGCTGCAGAGGTTCTGTGCTTGGTGAGCAAGGCTaGGCCTTCCCCAGTGGCGGCGGGCAGGGCAGCGTCATGGACAGC +
Preference number: 1 (lower is better)
Translates to: GPGICCRGSVLGEQG*AFPSGGGQGSVMDS
Trigger: GCTGTCCATGACGCTGCCCTGCCCGCCGCCACTGGGGAAGGCCCAGCCTTGCTCACCAAGCACAGAACCTCTGCAGCAGATCCCGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp AGCAAGGCTGGGCCTTCCCCAGTGGCGGCGGGCAGGGCAGCGTCATaGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGC +
Preference number: 1 (lower is better)
Translates to: SKAGPSPVAAGRAAS*TAAVVQDATLQVAS
Trigger: GCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTGCCCTGCCCGCCGCCACTGGGGAAGGCCCAGCCTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR TCA 90 bp AAGCGCCTCGTGAGAAGCATCCCTCCATGGCCCTGCACGTGGCCTTaGTGCCTGGGACCCAGTTCCGTGGCCCACCCTGCCTGCCACGAC +
Preference number: 1 (lower is better)
Translates to: KRLVRSIPPWPCTWP*CLGPSSVAHPACHD
Trigger: GTCGTGGCAGGCAGGGTGGGCCACGGAACTGGGTCCCAGGCATCAAGGCCACGTGCAGGGCCATGGAGGGATGCTTCTCACGAGGCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp ATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCACAGCAGCCGTaGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAAGTCTGGAAC +
Preference number: 1 (lower is better)
Translates to: MAPGGITPPLEAQQP*RGGVSGSQGLQVWN
Trigger: GTTCCAGACTTGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp GCTCAACTCCCTACGCTCAGGAGCCCTTCTGGGGGCCAGACCACATaGCAGCTTCAGCACAAGCAGGCCTCCCACCCTCAGGGACCAGGT +
Preference number: 1 (lower is better)
Translates to: AQLPTLRSPSGGQTT*QLQHKQASHPQGPG
Trigger: ACCTGGTCCCTGAGGGTGGGAGGCCTGCTTGTGCTGAAGCTGCCATGTGGTCTGGCCCCCAGAAGGGCTCCTGAGCGTAGGGAGTTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp TTCAGGCTGGGAGAAGCTGTGGGCTGGGCGCTGTTGGCAGCAGCCTaGGCTGATAAGATTCACAGGGTGGACCGTCAGCCAGAGGCAGGA +
Preference number: 1 (lower is better)
Translates to: FRLGEAVGWALLAAA*ADKIHRVDRQPEAG
Trigger: TCCTGCCTCTGGCTGACGGTCCACCCTGTGAATCTTATCAGCCCAGGCTGCTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp CAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAAGTCTaGAACTCAAACCCCAAGTGTCAGCTCTGTGGCCATCAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: QPWRGGVSGSQGLQV*NSNPKCQLCGHQPR
Trigger: CCTGGGCTGATGGCCACAGAGCTGACACTTGGGGTTTGAGTTCCAGACTTGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp ACATCCAACAATGGTATGTCCGGCTCGCCATCCTTCACCCCACCATaGCCCCGGGAGGCATCACGCCACCTCTGGAAGCACAGCAGCCGT +
Preference number: 1 (lower is better)
Translates to: TSNNGMSGSPSFTPP*PREASRHLWKHSSR
Trigger: ACGGCTGCTGTGCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCGAGCCGGACATACCATTGTTGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR TCA 90 bp TGCAGCCAAGGAAGAGGTCACTCACGGGCGCAGATGCCACCAGAATaGGAGAAGGCCACACTGCCCAGGACTCTCAGAACCCCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: CSQGRGHSRAQMPPE*EKATLPRTLRTPRR
Trigger: CCTCCTGGGGGTTCTGAGAGTCCTGGGCAGTGTGGCCTTCTCTCATTCTGGTGGCATCTGCGCCCGTGAGTGACCTCTTCCTTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 90 bp CCACAGGGCAGTGCAGCCAAGGAAGAGGTCACTCACGGGCGCAGATaGCACCAGAATGAGAGAAGGCCACACTGCCCAGGACTCTCAGAA +
Preference number: 1 (lower is better)
Translates to: PQGSAAKEEVTHGRR*HQNERRPHCPGLSE
Trigger: TTCTGAGAGTCCTGGGCAGTGTGGCCTTCTCTCATTCTGGTGGCATCTGCGCCCGTGAGTGACCTCTTCCTTGGCTGCACTGCCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp CCCAAGCGGGGACCGGGCACCTCCAGGGAGGAATGTACAGGGGAGTaGGGTCTGTACAGTGCTCTGCACACCTCAATTGCTAACAGGACA +
Preference number: 1 (lower is better)
Translates to: PKRGPGTSREECTGE*GLYSALHTSIANRT
Trigger: TGTCCTGTTAGCAATTGAGGTGTGCAGAGCACTGTACAGACCCCACTCCCCTGTACATTCCTCCCTGGAGGTGCCCGGTCCCCGCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp AATGTGTTGGTTTCAGGCTGGGAGAAGCTGTGGGCTGGGCGCTGTTaGCAGCAGCCTGGGCTGATAAGATTCACAGGGTGGACCGTCAGC +
Preference number: 1 (lower is better)
Translates to: NVLVSGWEKLWAGRC*QQPGLIRFTGWTVS
Trigger: GCTGACGGTCCACCCTGTGAATCTTATCAGCCCAGGCTGCTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCCTGAAACCAACACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp TACAGTGCTCTGCACACCTCAATTGCTAACAGGACAAAAGGCCCTTaGACGCAGGGCTTCTCTGTCCCTTCGCTCGCTTCTGAAGCGCCT +
Preference number: 1 (lower is better)
Translates to: YSALHTSIANRTKGP*TQGFSVPSLASEAP
Trigger: AGGCGCTTCAGAAGCGAGCGAAGGGACAGAGAAGCCCTGCGTCCAAGGGCCTTTTGTCCTGTTAGCAATTGAGGTGTGCAGAGCACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp CTTATTAGAAAATGTGTTGGTTTCAGGCTGGGAGAAGCTGTGGGCTaGGCGCTGTTGGCAGCAGCCTGGGCTGATAAGATTCACAGGGTG +
Preference number: 1 (lower is better)
Translates to: LIRKCVGFRLGEAVG*ALLAAAWADKIHRV
Trigger: CACCCTGTGAATCTTATCAGCCCAGGCTGCTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCCTGAAACCAACACATTTTCTAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 90 bp AATAACTTATTAGAAAATGTGTTGGTTTCAGGCTGGGAGAAGCTGTaGGCTGGGCGCTGTTGGCAGCAGCCTGGGCTGATAAGATTCACA +
Preference number: 1 (lower is better)
Translates to: NNLLENVLVSGWEKL*AGRCWQQPGLIRFT
Trigger: TGTGAATCTTATCAGCCCAGGCTGCTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCCTGAAACCAACACATTTTCTAATAAGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 90 bp TGCTCACCCATACACCAGCCACACACAAGTACTCATACGCATACATaGCCACACACAAAGTACACACACGTACACCATATGCATATGTAT +
Preference number: 1 (lower is better)
Translates to: CSPIHQPHTSTHTHT*PHTKYTHVHHMHMY
Trigger: ATACATATGCATATGGTGTACGTGTGTGTACTTTGTGTGTGGGCATGTATGCGTATGAGTACTTGTGTGTGGCTGGTGTATGGGTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 90 bp CGTACACCATATGCATATGTATGCACTCATACACTCATACATATGTaGCCCCTCAGAGAAGTACACAAGAACATGCGCATCACACATGCA +
Preference number: 1 (lower is better)
Translates to: RTPYAYVCTHTLIHM*PLREVHKNMRITHA
Trigger: TGCATGTGTGATGCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGTGCATACATATGCATATGGTGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGAGCGCCGTGGCCAGCTaGGGCCTCCACAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGSAVAS*GLHRQW
Trigger: CCACTGCCTGTGGAGGCCCCAGCTGGCCACGGCGCT...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGTTCCGTGGCCCACCCTaGCTGCCACGACCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGFRGPP*LPRPLP
Trigger: GGGGAGGGGTCGTGGCAGGCAGGGTGGGCCACGGAA...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCCACGGGGGATGGCAGTaGGCTCCCTTGGCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSHGGWQ*APLAQG
Trigger: CCCCTGCGCCAAGGGAGCCCACTGCCATCCCCCGTG...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTCCTGCCCCCAGCATaGCCCGCACCAACTGGGACC +
Preference number: 2 (lower is better)
Translates to: AASHLLPGPKACHQPEARLLPPA*PAPTGT
Trigger: GGTCCCAGTTGGTGCGGGGCATGCTGGGGGCAGGAG...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCCCACCTGGCCCGCCCTaGCCCTCCTGCCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTPPGPP*PSCPQH
Trigger: ATGCTGGGGGCAGGAGGGGCAGGGCGGGCCAGGTGG...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCTCTCCGGGTCCAGTCTaGGCAGGGCGGCAGGGCGGG +
Preference number: 2 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTSPGPV*AGRQGG
Trigger: CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGA...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGGGAGAGGGGTCCCATaGACCCCCACCCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSGRGVP*TPTLAV
Trigger: CACAGCCAGGGTGGGGGTCCATGGGACCCCTCTCCC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCTTGGTGAGCAAGGCTaGGCCTTCCCCAGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGLGEQG*AFPSGG
Trigger: GCCGCCACTGGGGAAGGCCCAGCCTTGCTCACCAAG...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGAGAGCAAAGCAGGTGTaGACAGAGCCGGGCGGCGCG +
Preference number: 2 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGRAKQV*TEPGGA
Trigger: CGCGCCGCCCGGCTCTGTCCACACCTGCTTTGCTCT...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCAAGACCCGTGGCTCTaGGCAGTGTGGGGCATCCCG +
Preference number: 2 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGQDPWL*AVWGIP
Trigger: CGGGATGCCCCACACTGCCCAGAGCCACGGGTCTTG...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCCAGGGCGGGGCTGTGTaGATGCGGCATGCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTQGGAV*MRHAQP
Trigger: CGGCTGAGCATGCCGCATGCACACAGCCCCGCCCTG...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGCCTCTCGTCAGGCCTaGAGTGCTCGTCCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSASRQA*SARPVR
Trigger: CCTCACTGGACGAGCACTGCAGGCCTGACGAGAGGC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCTCACCACGCAGAGTTTaGGTGGTGGGTGCCCATGGG +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSSPRRV*VVGAHG
Trigger: CCCATGGGCACCCACCACTCAAACTCTGCGTGGTGA...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGGGCCCCGGGATCTGCTaGAGAGGTTCTGTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGGPGIC*RGSVLG
Trigger: ACCAAGCACAGAACCTCTGCAGCAGATCCCGGGGCC...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCCCACCCACAGGGCAGTaGAGCCAAGGAAGAGGTCAC +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSPPTGQ*SQGRGH
Trigger: GTGACCTCTTCCTTGGCTGCACTGCCCTGTGGGTGG...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGAAGGGCGAGGGGCTATaGCGACAAACAACCCACCCC +
Preference number: 2 (lower is better)
Translates to: AASHLLPGPKACHQPEARKGEGL*RQTTHP
Trigger: GGGGTGGGTTGTTTGTCGCCATAGCCCCTCGCCCTT...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAAGTCCCCGGGGACATCTaGGAGAGGCCAGCACGATCC +
Preference number: 2 (lower is better)
Translates to: TAKRSTHPATHPHHTGPEVPGDI*ERPARS
Trigger: GGATCGTGCTGGCCTCTCCCAGATGTCCCCGGGGAC...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp CAGGACCTGCTTCCCCGGGCACTGCCAGCCCACCACCGCCGGGTACCTGCACAGGTGGGGTCTGTACAGTaGTCTGCACACCTCAATTGC +
Preference number: 2 (lower is better)
Translates to: QDLLPRALPAHHRRVPAQVGSVQ*SAHLNC
Trigger: GCAATTGAGGTGTGCAGAGCACTGTACAGACCCCAC...CTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCATGGACAGCCGCGGTaGTCCAAGATGCCACTCTTC +
Preference number: 2 (lower is better)
Translates to: AASHLLPGPKACHQPEARHGQPR*SKMPLF
Trigger: GAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATG...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CAGGACCTGCTTCCCCGGGCACTGCCAGCCCACCACCGCCGGGTACCTGCACAGATAAGATTCACAGGGTaGACCGTCAGCCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: QDLLPRALPAHHRRVPAQIRFTG*TVSQRQ
Trigger: CTGCCTCTGGCTGACGGTCCACCCTGTGAATCTTAT...CTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGCAGATGCCACCAGAATaGGAGAAGGCCACACTGCCC +
Preference number: 2 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGQMPPE*EKATLP
Trigger: GGGCAGTGTGGCCTTCTCTCATTCTGGTGGCATCTG...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGATATCAAGGAGACACTaGCAGTCCCTGGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: AASHLLPGPKACHQPEARISRRH*QSLGLQ
Trigger: CTGGAGGCCCAGGGACTGCCAGTGTCTCCTTGATAT...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGCGCCAATTGAGCGTCTaGAAGCAGGCCGCGCCGGGC +
Preference number: 2 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRRQLSV*KQAAPG
Trigger: GCCCGGCGCGGCCTGCTTTCAGACGCTCAATTGGCG...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCAACACAAACGCCAATTaGGCGTCTGAAAGCAGGCCG +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSNTNAN*ASESRP
Trigger: CGGCCTGCTTTCAGACGCTCAATTGGCGTTTGTGTT...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAACGCGGTGGTCCAAGATaGCACTCTTCAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: TAKRSTHPATHPHHTGPERGGPR*HSSGGK
Trigger: CTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCG...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp CCTTCGCTCGCTTCTGAAGCGCCTCGTGAGAAGCATCCCTCCATGGCCCTGCACCCTGGCCCCGGGATCTaGTGCAGAGGTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: PSLASEAPREKHPSMALHPGPGI*CRGSVL
Trigger: AAGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGG...GTGCAGGGCCATGGAGGGATGCTTCTCACGAGGCGCTTCAGAAGCGAGCGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCCATGGACCCCCACCCTaGCTGTGCCACGGACGCCAT +
Preference number: 2 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPHGPPP*LCHGRH
Trigger: ATGGCGTCCGTGGCACAGCCAGGGTGGGGGTCCATG...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCGTGTTGGTTTCAGGCTaGGAGAAGCTGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGVLVSG*EKLWAG
Trigger: CCCAGCCCACAGCTTCTCCCAGCCTGAAACCAACAC...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCCCACCCCCATCACACTaGGCCAGAAACTGTGTCTTA +
Preference number: 2 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSPPPSH*ARNCVL
Trigger: TAAGACACAGTTTCTGGCCCAGTGTGATGGGGGTGG...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGAGGACAAAAGGCCCTTaGACGCAGGGCTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGRTKGP*TQGFSV
Trigger: GACAGAGAAGCCCTGCGTCCAAGGGCCTTTTGTCCT...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCACACCAAGCTACACATTaGCCTGGCAAGGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAHQATH*PGKGSG
Trigger: CCCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTG...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACAGGCTGCGGACTCCCTTaGCCCCCACCCTGCCCACAC +
Preference number: 2 (lower is better)
Translates to: GLSEPPGGGSARINIKETGCGLP*PPPCPH
Trigger: GTGTGGGCAGGGTGGGGGGCAAGGGAGTCCGCAGCC...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGGCCAGCACGATCCAGTaGGCACTGGGGAGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRASTIQ*ALGRGV
Trigger: GACCCCTCTCCCCAGTGCCCACTGGATCGTGCTGGC...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp TGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGAACGTCAGTGCACATGTaGAGAGCAGTGAGATCCCAG +
Preference number: 2 (lower is better)
Translates to: WLSPGLTTQSLSGGCPWGTSVHM*RAVRSQ
Trigger: CTGGGATCTCACTGCTCTGCACATGTGCACTGACGT...TCCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAGGGAGGCGTGCTCCATaGCAGGAAATGACATCCAAT +
Preference number: 2 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAGRRAP*QEMTSN
Trigger: ATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCC...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp CAGGACCTGCTTCCCCGGGCACTGCCAGCCCACCACCGCCGGGTACCTGCACAGCATGTACACAACTCATaGACATGTACACCTATACAC +
Preference number: 2 (lower is better)
Translates to: QDLLPRALPAHHRRVPAQHVHNS*TCTPIH
Trigger: GTGTATAGGTGTACATGTGCATGAGTTGTGTACATG...CTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACAAGCAAAGCAGCGCCGTaGCCAGCTGGGGCCTCCACA +
Preference number: 2 (lower is better)
Translates to: GLSEPPGGGSARINIKETSKAAP*PAGAST
Trigger: TGTGGAGGCCCCAGCTGGCCACGGCGCTGCTTTGCT...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACGTGGCCTTGATGCCTaGGACCCAGTTCCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: GLSEPPGGGSARINIKETRGLDA*DPVPWP
Trigger: GGGCCACGGAACTGGGTCCCAGGCATCAAGGCCACG...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCACAACCGCAGGATGTTaGAAAGGGGAAACCCAACAC +
Preference number: 2 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPTTAGC*KGETQH
Trigger: GTGTTGGGTTTCCCCTTTTCAACATCCTGCGGTTGT...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAGACACCCCCAAGACCTaGCTCCACCTGGCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKDTPKT*LHLARP
Trigger: AGGGCGGGCCAGGTGGAGTCAGGTCTTGGGGGTGTC...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAGCCACACCCTCGGCATaGGCGGAGCAAAGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKATPSA*AEQSSA
Trigger: GGCGCTGCTTTGCTCCGCGCATGCCGAGGGTGTGGC...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCCCCCCACCCTGGCTGTaGCACGGACGCCATGGGAGT +
Preference number: 2 (lower is better)
Translates to: THTLIHMCPLREVHKNMRPPPWL*HGRHGS
Trigger: ACTCCCATGGCGTCCGTGGCACAGCCAGGGTGGGGG...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACCGGAGCCAGAGAAATaGAGGGCGTCAGAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: GLSEPPGGGSARINIKETPEPEK*RASEQS
Trigger: GCTTTGCTCTGACGCCCTCCATTTCTCTGGCTCCGG...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAGCTGGAGGGATGAGGTaGGCCAGGTCAGGCCCACCC +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKAGGMR*ARSGPP
Trigger: GGGTGGGCCTGACCTGGCCCACCTCATCCCTCCAGC...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp TGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGATGCAAGAAAATAGGGTaGCGATTTCTGTACAGTCTA +
Preference number: 2 (lower is better)
Translates to: WLSPGLTTQSLSGGCPWGCKKIG*RFLYSL
Trigger: TAGACTGTACAGAAATCGGCACCCTATTTTCTTGCA...TCCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAGGCTGGGAGAAGCTGTaGGCTGGGCGCTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKGWEKL*AGRCWQ
Trigger: CTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCC...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACTGGGCCTTCCCCAGTaGCGGCGGGCAGGGCAGCGT +
Preference number: 2 (lower is better)
Translates to: LTKSELQENRVPISVQSTLGLPQ*RRAGQR
Trigger: ACGCTGCCCTGCCCGCCGCCACTGGGGAAGGCCCAG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAATGCCCCGCACCAACTaGGACCAGCCCCAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKMPRTN*DQPQAK
Trigger: TTTGGCCTGGGGCTGGTCCCAGTTGGTGCGGGGCAT...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAGCAGAGTTTGAGTGGTaGGTGCCCATGGGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKAEFEW*VPMGSG
Trigger: CCCGCTCCCCATGGGCACCCACCACTCAAACTCTGC...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCGCTCAGGAGCCCTTCTaGGGGCCAGACCACATGGCA +
Preference number: 2 (lower is better)
Translates to: THTLIHMCPLREVHKNMRAQEPF*GPDHMA
Trigger: TGCCATGTGGTCTGGCCCCCAGAAGGGCTCCTGAGC...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAATGCCACTCTTCAGGTaGCAAGCCGCCCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKMPLFR*QAAQAG
Trigger: ACCTGCCTGGGCGGCTTGCCACCTGAAGAGTGGCAT...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATGCTGCAGAGGTTCTGTaGTTGGTGAGCAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNAAEVL*LVSKAG
Trigger: CCCAGCCTTGCTCACCAAGCACAGAACCTCTGCAGC...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATGCCATGGGAGTCACCTaGGTGATGACACCAGTCAGC +
Preference number: 2 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNAMGVT*VMTPVS
Trigger: GCTGACTGGTGTCATCACCCAGGTGACTCCCATGGC...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR TCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACCCTGCACGTGGCCTTaGTGCCTGGGACCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LTKSELQENRVPISVQSTPCTWP*CLGPSS
Trigger: GGAACTGGGTCCCAGGCATCAAGGCCACGTGCAGGG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACATGTGTGCATGCGGCATaGTCAGCCGGGCCACACCCT +
Preference number: 2 (lower is better)
Translates to: LTKSELQENRVPISVQSTCVHAA*SAGPHP
Trigger: AGGGTGTGGCCCGGCTGAGCATGCCGCATGCACACA...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCGAATGTACAGGGGAGTaGGGTCTGTACAGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: THTLIHMCPLREVHKNMRECTGE*GLYSAL
Trigger: CAGAGCACTGTACAGACCCCACTCCCCTGTACATTC...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CAA 90 bp TCATGCAGAGTGCTATTCTGTCTAAATAACTTATTAGAAAATGTGTaGGTTTCAGGCTGGGAGAAGCTGTGGGCTGGGCGCTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: SCRVLFCLNNLLENV*VSGWEKLWAGRCWQ
Trigger: CTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCCTGAAACCAACACATTTTCTAATAAGTTATTTAGACAGAATAGCACTCTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CAA 90 bp ATCACACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTaGTCCCAAGAATTAAAGTCATGCAGAGTGCTATTCTGTCTAAAT +
Preference number: 2 (lower is better)
Translates to: ITLGQKLCLRVQTTV*SQELKSCRVLFCLN
Trigger: ATTTAGACAGAATAGCACTCTGCATGACTTTAATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACCACACAAAGGGGTCTaGGCAAGTGTTTATTCTTCT +
Preference number: 2 (lower is better)
Translates to: LTKSELQENRVPISVQSTPHKGV*ASVYSS
Trigger: AGAAGAATAAACACTTGCCCAGACCCCTTTGTGTGG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp TCGGCATGCGCGGAGCAAAGCAGCGCCGTGGCCAGCTaGGGCCTCCACAGGCAGTGGCGCTGGGGCCGCAGG +
Preference number: 3 (lower is better)
Translates to: SACAEQSSAVAS*GLHRQWRWGRR
Trigger: CCTGCGGCCCCAGCGCCACTGCCTGTGGAGGCCCCAGCTGGCCACGGCGCTGCTTTGCTCCGCGCATGCCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp GCATGCGGCATGCTCAGCCGGGCCACACCCTCGGCATaGGCGGAGCAAAGCAGCGCCGTGGCCAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: ACGMLSRATPSA*AEQSSAVASWG
Trigger: GCCCCAGCTGGCCACGGCGCTGCTTTGCTCCGCGCATGCCGAGGGTGTGGCCCGGCTGAGCATGCCGCATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp CCACACCCTCGGCATGCGCGGAGCAAAGCAGCGCCGTaGCCAGCTGGGGCCTCCACAGGCAGTGGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: PHPRHARSKAAP*PAGASTGSGAG
Trigger: CCCAGCGCCACTGCCTGTGGAGGCCCCAGCTGGCCACGGCGCTGCTTTGCTCCGCGCATGCCGAGGGTGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR TCA 72 bp GGCGCAGGGGCAACTGTCCCACCGTCCCTCGGGCACTaGCAGGAAGGTGGCCCCACGAGGGCCCACACAGCC +
Preference number: 3 (lower is better)
Translates to: GAGATVPPSLGH*QEGGPTRAHTA
Trigger: GGCTGTGTGGGCCCTCGTGGGGCCACCTTCCTGTCAGTGCCCGAGGGACGGTGGGACAGTTGCCCCTGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp CCGCAGGCGGGGCCGGAGCCTGGCCCCGGGATCTGCTaGAGAGGTTCTGTGCTTGGTGAGCAAGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: PQAGPEPGPGIC*RGSVLGEQGWA
Trigger: GGCCCAGCCTTGCTCACCAAGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGGCTCCGGCCCCGCCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp TGCGCGACTGCAGCGCCAGCCCACGGGGGATGGCAGTaGGCTCCCTTGGCGCAGGGGCAACTGTCCCACCGT +
Preference number: 3 (lower is better)
Translates to: CATAAPAHGGWQ*APLAQGQLSHR
Trigger: ACGGTGGGACAGTTGCCCCTGCGCCAAGGGAGCCCACTGCCATCCCCCGTGGGCTGGCGCTGCAGTCGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp AGGGAAGCCGTGAGCAGGACCTGCTTCCCCGGGCACTaGCAGCCCACCACCGCCGGGTACCTGCACAGCCAC +
Preference number: 3 (lower is better)
Translates to: REAVSRTCFPGH*QPTTAGYLHSH
Trigger: GTGGCTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTGCTCACGGCTTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATaGGGAGCGGGCAGGGGGCCAGCACTCGGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: GLTTQSLSGGCP*GAGRGPALGEA
Trigger: GGCTTCCCCGAGTGCTGGCCCCCTGCCCGCTCCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp CCCCCAGCACAGCAAGACCCGTGGCTCTGGGCAGTGTaGGGCATCCCGAGGCGCTTCAGCCCTCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: PPAQQDPWLWAV*GIPRRFSPQLP
Trigger: GGGCAGCTGAGGGCTGAAGCGCCTCGGGATGCCCCACACTGCCCAGAGCCACGGGTCTTGCTGTGCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp CAGTGTGGGGCATCCCGAGGCGCTTCAGCCCTCAGCTaGCCGGAGCCTCTCGTCAGGCCTGCAGTGCTCGTC +
Preference number: 3 (lower is better)
Translates to: QCGASRGASALS*PEPLVRPAVLV
Trigger: GACGAGCACTGCAGGCCTGACGAGAGGCTCCGGGCAGCTGAGGGCTGAAGCGCCTCGGGATGCCCCACACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp TGGCGGCGGGCAGGGCAGCGTCATGGACAGCCGCGGTaGTCCAAGATGCCACTCTTCAGGTGGCAAGCCGCC +
Preference number: 3 (lower is better)
Translates to: WRRAGQRHGQPR*SKMPLFRWQAA
Trigger: GGCGGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTGCCCTGCCCGCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GGGCCTTCCCCAGTGGCGGCGGGCAGGGCAGCGTCATaGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAG +
Preference number: 3 (lower is better)
Translates to: GPSPVAAGRAAS*TAAVVQDATLQ
Trigger: CTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTGCCCTGCCCGCCGCCACTGGGGAAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GCCAGAGAAATGGAGGGCGTCAGAGCAAAGCAGGTGTaGACAGAGCCGGGCGGCGCGGGGCAGACCAGGCCC +
Preference number: 3 (lower is better)
Translates to: AREMEGVRAKQV*TEPGGAGQTRP
Trigger: GGGCCTGGTCTGCCCCGCGCCGCCCGGCTCTGTCCACACCTGCTTTGCTCTGACGCCCTCCATTTCTCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CAA 90 bp CAGGACCTGCTTCCCCGGGCACTGCCAGCCCACCACCGCCGGGTACCTGCACAGCCACCAAGCTACACATaGGCCTGGCAAGGGTTCCGG +
Preference number: 3 (lower is better)
Translates to: QDLLPRALPAHHRRVPAQPPSYT*AWQGFR
Trigger: CCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTGG...CTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp AGCTCCGCCCCAGCCTGGCAGGCACACCAGTGCCTCTaGTCACCTCAGGGGCGGCAGGGTTCTGCACACAAC +
Preference number: 3 (lower is better)
Translates to: SSAPAWQAHQCL*SPQGRQGSAHN
Trigger: GTTGTGTGCAGAACCCTGCCGCCCCTGAGGTGAGCAGAGGCACTGGTGTGCCTGCCAGGCTGGGGCGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp CCTGCCTGTGACCTCAGGAAGGAGAGACCAGGAGCATaGCCAGCGGAAGCCGAGGCGGCCACCCCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: PACDLRKERPGA*PAEAEAATPLP
Trigger: GGGAAGAGGGGTGGCCGCCTCGGCTTCCGCTGGCCATGCTCCTGGTCTCTCCTTCCTGAGGTCACAGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp TGGCCTTCAAGGGCGCCACCAAGCTACACATTGGCCTaGCAAGGGTTCCGGGCAGCTCCGCCCCAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: WPSRAPPSYTLA*QGFRAAPPQPG
Trigger: GCCAGGCTGGGGCGGAGCTGCCCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTGGCGCCCTTGAAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp CCCAGTGGCCTTCAAGGGCGCCACCAAGCTACACATTaGCCTGGCAAGGGTTCCGGGCAGCTCCGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: PSGLQGRHQATH*PGKGSGQLRPS
Trigger: GCTGGGGCGGAGCTGCCCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTGGCGCCCTTGAAGGCCACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp CAGGGCAGCGTCATGGACAGCCGCGGTGGTCCAAGATaGCACTCTTCAGGTGGCAAGCCGCCCAGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: QGSVMDSRGGPR*HSSGGKPPRQV
Trigger: CACCTGCCTGGGCGGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp AGCACAAGCAGGCCTCCCACCCTCAGGGACCAGGTCTaGAGCGACTCACACCTGGGCAGTGGCAGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: STSRPPTLRDQV*SDSHLGSGSCL
Trigger: CAGGCAGCTGCCACTGCCCAGGTGTGAGTCGCTGCAGACCTGGTCCCTGAGGGTGGGAGGCCTGCTTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp TTCAGCCCTCAGCTGCCCGGAGCCTCTCGTCAGGCCTaGAGTGCTCGTCCAGTGAGGATGTCCTCCTTCGCC +
Preference number: 3 (lower is better)
Translates to: FSPQLPGASRQA*SARPVRMSSFA
Trigger: GGCGAAGGAGGACATCCTCACTGGACGAGCACTGCAGGCCTGACGAGAGGCTCCGGGCAGCTGAGGGCTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp AGCCCGAGGCTCCAAAGGCACAGGACCAAGGGACGCTaGCAGCACCCCGACATGACACCCCCAAGACCTGAC +
Preference number: 3 (lower is better)
Translates to: SPRLQRHRTKGR*QHPDMTPPRPD
Trigger: GTCAGGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTTTGGAGCCTCGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GGAGGCATCACGCCACCTCTGGAAGCACAGCAGCCGTaGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAA +
Preference number: 3 (lower is better)
Translates to: GGITPPLEAQQP*RGGVSGSQGLQ
Trigger: TTGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGAGGTGGCGTGATGCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp CTGCGGGGCTCAACTCCCTACGCTCAGGAGCCCTTCTaGGGGCCAGACCACATGGCAGCTTCAGCACAAGCA +
Preference number: 3 (lower is better)
Translates to: LRGSTPYAQEPF*GPDHMAASAQA
Trigger: TGCTTGTGCTGAAGCTGCCATGTGGTCTGGCCCCCAGAAGGGCTCCTGAGCGTAGGGAGTTGAGCCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp AATGGTATGTCCGGCTCGCCATCCTTCACCCCACCATaGCCCCGGGAGGCATCACGCCACCTCTGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: NGMSGSPSFTPP*PREASRHLWKH
Trigger: GTGCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCGAGCCGGACATACCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp CAAACAGACATAAGCAAGTCAGCAGGCAACACAGGGTaGGCGACTGCAGCGCCAGCCCACGGGGGATGGCAG +
Preference number: 3 (lower is better)
Translates to: QTDISKSAGNTG*ATAAPAHGGWQ
Trigger: CTGCCATCCCCCGTGGGCTGGCGCTGCAGTCGCGCACCCTGTGTTGCCTGCTGACTTGCTTATGTCTGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GGAGAAGCTGTGGGCTGGGCGCTGTTGGCAGCAGCCTaGGCTGATAAGATTCACAGGGTGGACCGTCAGCCA +
Preference number: 3 (lower is better)
Translates to: GEAVGWALLAAA*ADKIHRVDRQP
Trigger: TGGCTGACGGTCCACCCTGTGAATCTTATCAGCCCAGGCTGCTGCCAACAGCGCCCAGCCCACAGCTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CAA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCCTCTGCACACCTCAATaGCTAACAGGACAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSLCTPQ*LTGQKA
Trigger: GGCCTTTTGTCCTGTTAGCAATTGAGGTGTGCAGAG...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR TCA 72 bp GATGTTGAAAAGGGGAAACCCAACACAAACGCCAATTaGGCGTCTGAAAGCAGGCCGCGCCGGGCGGCGGGC +
Preference number: 3 (lower is better)
Translates to: DVEKGKPNTNAN*ASESRPRRAAG
Trigger: GCCCGCCGCCCGGCGCGGCCTGCTTTCAGACGCTCAATTGGCGTTTGTGTTGGGTTTCCCCTTTTCAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR TCA 72 bp GGAAGAGGTCACTCACGGGCGCAGATGCCACCAGAATaGGAGAAGGCCACACTGCCCAGGACTCTCAGAACC +
Preference number: 3 (lower is better)
Translates to: GRGHSRAQMPPE*EKATLPRTLRT
Trigger: GGTTCTGAGAGTCCTGGGCAGTGTGGCCTTCTCTCATTCTGGTGGCATCTGCGCCCGTGAGTGACCTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR GCA 72 bp AGTGCAGCCAAGGAAGAGGTCACTCACGGGCGCAGATaGCACCAGAATGAGAGAAGGCCACACTGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: SAAKEEVTHGRR*HQNERRPHCPG
Trigger: TCCTGGGCAGTGTGGCCTTCTCTCATTCTGGTGGCATCTGCGCCCGTGAGTGACCTCTTCCTTGGCTGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GCACATCTGGGGCCTCAGAACAATCTGCCCCCGCCGTaGGCTCACAGTACAGTTTCGGGAACAAACAGCAGC +
Preference number: 3 (lower is better)
Translates to: AHLGPQNNLPPP*AHSTVSGTNSS
Trigger: GCTGCTGTTTGTTCCCGAAACTGTACTGTGAGCCCACGGCGGGGGCAGATTGTTCTGAGGCCCCAGATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp GCAAGTCTGGAACTCAAACCCCAAGTGTCAGCTCTGTaGCCATCAGCCCAGGAACACAGGCCTGTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: ASLELKPQVSAL*PSAQEHRPVAK
Trigger: TTTGGCCACAGGCCTGTGTTCCTGGGCTGATGGCCACAGAGCTGACACTTGGGGTTTGAGTTCCAGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CCA 72 bp CTGCACACCTCAATTGCTAACAGGACAAAAGGCCCTTaGACGCAGGGCTTCTCTGTCCCTTCGCTCGCTTCT +
Preference number: 3 (lower is better)
Translates to: LHTSIANRTKGP*TQGFSVPSLAS
Trigger: AGAAGCGAGCGAAGGGACAGAGAAGCCCTGCGTCCAAGGGCCTTTTGTCCTGTTAGCAATTGAGGTGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CAA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCATTATTAGAAAATGTGTaGGTTTCAGGCTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: SGSTAAVARRSKRIPGSALLENV*VSGWEK
Trigger: CTTCTCCCAGCCTGAAACCAACACATTTTCTAATAA...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR-3UTR CAA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCGACAACCGCAGGATGTaGAAAAGGGGAAACCCAACA +
Preference number: 3 (lower is better)
Translates to: THTLIHMCPLREVHKNMRDNRRM*KRGNPT
Trigger: TGTTGGGTTTCCCCTTTTCAACATCCTGCGGTTGTC...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GCGTCTGAAAGCAGGCCGCGCCGGGCGGCGGGCAGGCGGGCAAAGGCGGACAGGGAGGCCCACAATGCATaGACCCGGCCGGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: ASESRPRRAAGRRAKADREAHNA*TRPGGA
Trigger: CGCGCCGCCCGGCCGGGTGCATGCATTGTGGGCCTC...CCTGTCCGCCTTTGCCCGCCTGCCCGCCGCCCGGCGCGGCCTGCTTTCAGACGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGGCTTCAGCCCTCAGCTaGCCGGAGCCTCTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGASALS*PEPLVR
Trigger: CCTGACGAGAGGCTCCGGGCAGCTGAGGGCTGAAGC...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGAGCAAAGCAGCGCCGTaGCCAGCTGGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGSKAAP*PAGAST
Trigger: TGTGGAGGCCCCAGCTGGCCACGGCGCTGCTTTGCT...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGCAAGACCCGTGGCTCTaGGCAGTGTGGGGCATCCCG +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGQDPWL*AVWGIP
Trigger: CGGGATGCCCCACACTGCCCAGAGCCACGGGTCTTG...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGGCACTGACAGGAAGGTaGCCCCACGAGGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGALTGR*PHEGPH
Trigger: GTGTGGGCCCTCGTGGGGCCACCTTCCTGTCAGTGC...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GCGTCTGAAAGCAGGCCGCGCCGGGCGGCGGGCAGGCGGGCAAAGGCGGACAGGCTTGGTGAGCAAGGCTaGGCCTTCCCCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ASESRPRRAAGRRAKADRLGEQG*AFPSGG
Trigger: GCCGCCACTGGGGAAGGCCCAGCCTTGCTCACCAAG...CCTGTCCGCCTTTGCCCGCCTGCCCGCCGCCCGGCGCGGCCTGCTTTCAGACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGGAGCCCCAGGCCCCTaGGCAGTGCTAGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSGAPGP*AVLGPG
Trigger: GCCGGGCCCTAGCACTGCTCAGGGGCCTGGGGCTCC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GCCGCAGGCGGGGCCGGAGCCTGGCCCCGGGATCTGCTGCAGAGGTTCTGTGCTGCCACACCCTCGGCATaGGCGGAGCAAAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AAGGAGAWPRDLLQRFCAATPSA*AEQSSA
Trigger: GGCGCTGCTTTGCTCCGCGCATGCCGAGGGTGTGGC...AGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGGCTCCGGCCCCGCCTGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGAGGACCAAGGGACGCTaGCAGCACCCCGACATGACA +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGRTKGR*QHPDMT
Trigger: TGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCT...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GCCGCAGGCGGGGCCGGAGCCTGGCCCCGGGATCTGCTGCAGAGGTTCTGTGCTGCTGGAGGGATGAGGTaGGCCAGGTCAGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: AAGGAGAWPRDLLQRFCAAGGMR*ARSGPP
Trigger: GGGTGGGCCTGACCTGGCCCACCTCATCCCTCCAGC...AGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGGCTCCGGCCCCGCCTGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCATGGGGGACACCCCCAAGACCTaGCTCCACCTGGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPGPKACHQPEARLGMGDTPKT*LHLARP
Trigger: AGGGCGGGCCAGGTGGAGTCAGGTCTTGGGGGTGTC...CCCCATGCCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGGCTGCAGAGGTTCTGTaGTTGGTGAGCAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGAAEVL*LVSKAG
Trigger: CCCAGCCTTGCTCACCAAGCACAGAACCTCTGCAGC...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCATGGGGCTCCAGGCCCTGCCCTaGCGTCGGTGGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LLPGPKACHQPEARLGMGLQALP*RRWAPT
Trigger: TGTTGGAGCCCACCGACGCCAGGGCAGGGCCTGGAG...CCCCATGCCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGTGTGGGCGGCCACCTTaGCGGCCGTCGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AASHLLPGPKACHQPEARCGRPP*RPSCPA
Trigger: TGCTGGGCACGACGGCCGTCAAGGTGGCCGCCCACA...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGCTGGGCCTTCCCCAGTaGCGGCGGGCAGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGLGLPQ*RRAGQR
Trigger: ACGCTGCCCTGCCCGCCGCCACTGGGGAAGGCCCAG...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGGACCTGCTTCCCCGGGCACTGCCAGCCCACCACCGCCGGGTACCTGCACAGCGTGGCCTTGATGCCTaGGACCCAGTTCCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QDLLPRALPAHHRRVPAQRGLDA*DPVPWP
Trigger: GGGCCACGGAACTGGGTCCCAGGCATCAAGGCCACG...CTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCTCCCCGGACCTGCCCTaGAGCTGCCCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSSPDLP*SCPGPP
Trigger: TGGAGGGCCTGGGCAGCTCCAGGGCAGGTCCGGGGA...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCATGGGCCTCCAGGCCCTaGCCTGGCGTCGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAWASRP*PGVGGL
Trigger: GAGCCCACCGACGCCAGGGCAGGGCCTGGAGGCCCA...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAACTGGGCAGTGGCAGCTaGCTGGGGCCACCCCACCCC +
Preference number: 4 (lower is better)
Translates to: TAKRSTHPATHPHHTGPELGSGS*LGPPHP
Trigger: GGGGTGGGGTGGCCCCAGGCAGCTGCCACTGCCCAG...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGCAGGCAACACAGGGTaGGCGACTGCAGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSAGNTG*ATAAPA
Trigger: GGCTGGCGCTGCAGTCGCGCACCCTGTGTTGCCTGC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGCAGCGCGTCCTTCTTaGCCCCCGGCAGCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSAARPS*PPAAPH
Trigger: ATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGGGCAGTGGGCTCCCTTaGCGCAGGGGCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: AASHLLPGPKACHQPEARGSGLP*RRGNCP
Trigger: GGGACAGTTGCCCCTGCGCCAAGGGAGCCCACTGCC...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGCACGGGGGATGGCAGTaGGCTCCCTTGGCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGHGGWQ*APLAQG
Trigger: CCCCTGCGCCAAGGGAGCCCACTGCCATCCCCCGTG...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGCTCCATGGCAGGAAATaGCATCCAATCAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGLHGRK*HPIRVS
Trigger: GGAAACCCTGATTGGATGTCATTTCCTGCCATGGAG...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCTCGGGAGGCCCACAATaGATGCACCCGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTSGGPQ*MHPAGR
Trigger: CCGCCCGGCCGGGTGCATGCATTGTGGGCCTCCCGA...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCCTCCTCGTGGGCCCGTaGAGCCACAATGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSLLVGP*SHNAHH
Trigger: GTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAG...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAATTCCGTGGCCCACCCTaGCTGCCACGACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TAKRSTHPATHPHHTGPEFRGPP*LPRPLP
Trigger: GGGGAGGGGTCGTGGCAGGCAGGGTGGGCCACGGAA...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCAGCTTCTCACCTGCTaGCCGGCCCCAAGGCATGCC +
Preference number: 4 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGQLLTC*PAPRHA
Trigger: GGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTG...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCGCCCACACAGCCCCCTaGCCGGCGGGGCAACCACCT +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAAHTAP*PAGQPP
Trigger: AGGTGGTTGCCCCGCCGGGCAGGGGGCTGTGTGGGC...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGGCCGTGAGCAGGACCTaGTTCCCCGGGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGAVSRT*FPGHCQ
Trigger: CTGGCAGTGCCCGGGGAAGCAGGTCCTGCTCACGGC...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGGACCTGCTTCCCCGGGCACTGCCAGCCCACCACCGCCGGGTACCTGCACAGATGCCACTCTTCAGGTaGCAAGCCGCCCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QDLLPRALPAHHRRVPAQMPLFR*QAAQAG
Trigger: ACCTGCCTGGGCGGCTTGCCACCTGAAGAGTGGCAT...CTGTGCAGGTACCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCAGGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CAA 72 bp CCCCAGTGGCCTTCAAGGGCGCCACCAAGCTACACATaGGCCTGGCAAGGGTTCCGGGCAGCTCCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PQWPSRAPPSYT*AWQGFRAAPPQ
Trigger: CTGGGGCGGAGCTGCCCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTGGCGCCCTTGAAGGCCACTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCATGGGGCTTGCCTCGGAAACGTaGGTCCACAGACATCCGCAG +
Preference number: 4 (lower is better)
Translates to: LLPGPKACHQPEARLGMGLASET*VHRHPQ
Trigger: CTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAG...CCCCATGCCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGTGCCGTCGTAGAAGATaGGGCGCGCCGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGCRRRR*GAPPPA
Trigger: AGCAGGAGGCGGCGCGCCGCATCTTCTACGACGGCA...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAACTCCTGCCCCCAGCATaGCCCGCACCAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: TAKRSTHPATHPHHTGPELLPPA*PAPTGT
Trigger: GGTCCCAGTTGGTGCGGGGCATGCTGGGGGCAGGAG...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGGCACACCAGTGCCTCTaGTCACCTCAGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGAHQCL*SPQGRQ
Trigger: CTGCCGCCCCTGAGGTGAGCAGAGGCACTGGTGTGC...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGATCCAAGAACCCACTTaGACACACACACACGCTCAA +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGIQEPT*THTHAQ
Trigger: TTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGAT...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CCTTCGCTCGCTTCTGAAGCGCCTCGTGAGAAGCATCCCTCCATGGCCCTGCACGACCTGCCCTGGAGCTaGCCAGGCCCTCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PSLASEAPREKHPSMALHDLPWS*PGPPPR
Trigger: CCTGGGTGGAGGGCCTGGGCAGCTCCAGGGCAGGTC...GTGCAGGGCCATGGAGGGATGCTTCTCACGAGGCGCTTCAGAAGCGAGCGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GCCGCAGGCGGGGCCGGAGCCTGGCCCCGGGATCTGCTGCAGAGGTTCTGTGCTAGGACAAAAGGCCCTTaGACGCAGGGCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AAGGAGAWPRDLLQRFCARTKGP*TQGFSV
Trigger: GACAGAGAAGCCCTGCGTCCAAGGGCCTTTTGTCCT...AGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGGCTCCGGCCCCGCCTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCCCAGCCCACGGGGGATaGCAGTGGGCTCCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAPAHGG*QWAPLA
Trigger: CGCCAAGGGAGCCCACTGCCATCCCCCGTGGGCTGG...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGTCACCACGCAGAGTTTaGGTGGTGGGTGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGSPRRV*VVGAHG
Trigger: CCCATGGGCACCCACCACTCAAACTCTGCGTGGTGA...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCCCAGCAGGGAAGCCGTaGGCAGGACCTGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAPAGKP*AGPASP
Trigger: CGGGGAAGCAGGTCCTGCTCACGGCTTCCCTGCTGG...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCAGATGCCGCCACGGCTaGGGGGCTCAACTCCCTACG +
Preference number: 4 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTRCRHG*GAQLPT
Trigger: CGTAGGGAGTTGAGCCCCGCAGCCGTGGCGGCATCT...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCAGAGCAAAGCAGGTGTaGACAGAGCCGGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGRAKQV*TEPGGA
Trigger: CGCGCCGCCCGGCTCTGTCCACACCTGCTTTGCTCT...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCGCTCACCAGCCCGGGTCTCCGGGTCCAGTCTGGGCAGGGCGGCAGGGCGGGCCACACAAAGGGGTCTaGGCAAGTGTTTATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GAHQPGSPGPVWAGRQGGPHKGV*ASVYSS
Trigger: AGAAGAATAAACACTTGCCCAGACCCCTTTGTGTGG...CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGACCCGGGCTGGTGAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCGCACAGCAAGACCCGTaGCTCTGGGCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGAQQDP*LWAVWG
Trigger: GCCCCACACTGCCCAGAGCCACGGGTCTTGCTGTGC...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCGCAGCGACTCACACCTaGGCAGTGGCAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGAATHT*AVAAAW
Trigger: CCAGGCAGCTGCCACTGCCCAGGTGTGAGTCGCTGC...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCCCGTCCCTCGGGCACTaGCAGGAAGGTGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPPSLGH*QEGGPT
Trigger: CGTGGGGCCACCTTCCTGTCAGTGCCCGAGGGACGG...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCACAATGCCCACCACGTTaGCATCCAGCACGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAQCPPR*HPARPP
Trigger: GGGTGGCCGTGCTGGATGGCAACGTGGTGGGCATTG...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCATGGGGGTGGGGTCTGTACAGTaGTCTGCACACCTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LLPGPKACHQPEARLGMGVGSVQ*SAHLNC
Trigger: GCAATTGAGGTGTGCAGAGCACTGTACAGACCCCAC...CCCCATGCCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCGGGGCGGCAGGGTTCTaGACACAACCACCCCGCACA +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAGAAGF*TQPPRT
Trigger: TGTGCGGGGTGGTTGTGTGCAGAACCCTGCCGCCCC...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAGCCTCTCGTCAGGCCTaGAGTGCTCGTCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAASRQA*SARPVR
Trigger: CCTCACTGGACGAGCACTGCAGGCCTGACGAGAGGC...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCCAGCACAGCCCTGGGTaGCCCAGGGCAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSQHSPG*PRAGGP
Trigger: AGGCCCGCCTGCCCTGGGGCACCCAGGGCTGTGCTG...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGTGCTTCCCCGGGCACTaGCAGCCCACCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRCFPGH*QPTTAG
Trigger: CCCGGCGGTGGTGGGCTGGCAGTGCCCGGGGAAGCA...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAGGCCTCAGAACAATCTaGCCCCGCCGTGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAGLRTI*PRRGLT
Trigger: TGTGAGCCCACGGCGGGGGCAGATTGTTCTGAGGCC...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCCCGGAGCCAGAGAAATaGAGGGCGTCAGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSPEPEK*RASEQS
Trigger: GCTTTGCTCTGACGCCCTCCATTTCTCTGGCTCCGG...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCCATGGACCCCCACCCTaGCTGTGCCACGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAHGPPP*LCHGRH
Trigger: ATGGCGTCCGTGGCACAGCCAGGGTGGGGGTCCATG...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAGCAGAGTTTGAGTGGTaGGTGCCCATGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAAEFEW*VPMGSG
Trigger: CCCGCTCCCCATGGGCACCCACCACTCAAACTCTGC...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGAGCTCAGGAGCCCTTCTaGGGGCCAGACCACATGGCA +
Preference number: 4 (lower is better)
Translates to: WLSPGLTTQSLSGGCPWGAQEPF*GPDHMA
Trigger: TGCCATGTGGTCTGGCCCCCAGAAGGGCTCCTGAGC...TCCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCGCATCACGCCACCTCTaGAAGCACAGCAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGASRHL*KHSSRG
Trigger: GCCACGGCTGCTGTGCTTCCAGAGGTGGCGTGATGC...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCTGGCGCCCATGTGTCTaGAGCCCAGCGACTCGTAGA +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGWRPCV*SPATRR
Trigger: TCTACGAGTCGCTGGGCTTCAGACACATGGGCGCCA...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCCGCCAATTGAGCGTCTaGAAGCAGGCCGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPRQLSV*KQAAPG
Trigger: GCCCGGCGCGGCCTGCTTTCAGACGCTCAATTGGCG...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGCATGGGGACAACCGCAGGATGTTaGAAAGGGGAAACCCAACAC +
Preference number: 4 (lower is better)
Translates to: LLPGPKACHQPEARLGMGTTAGC*KGETQH
Trigger: GTGTTGGGTTTCCCCTTTTCAACATCCTGCGGTTGT...CCCCATGCCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGCAGGCCCTGCTCCACTaGGGGGCAAGAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRQALLH*GARGAR
Trigger: CCTGGCCCCTCTTGCCCCTCAGTGGAGCAGGGCCTG...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCACAAACAGCAGCAGGTaGACCCCACCCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTTNSSR*TPPPVL
Trigger: GAGCACAGGGGGTGGGGTTCACCTGCTGCTGTTTGT...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCCCGTGCAGCCACAATaGCCACCACGTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGPVQPQ*PPRCHP
Trigger: TGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGG...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGCCTTGGCGATGCCCTTaGCTCGGAAACGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGPWRCP*LGNVSP
Trigger: TGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGG...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCCCAGCGAGAGGGTCATaGCCGGCAGCACGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAPARGS*PAARSG
Trigger: ACCACTACGTGCTGCCGGGCATGACCCTCTCGCTGG...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCACCACCCACAGGGCAGTaGAGCCAAGGAAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAPPTGQ*SQGRGH
Trigger: GTGACCTCTTCCTTGGCTGCACTGCCCTGTGGGTGG...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCTGGGGCGGATCCCAGGGTCTaGAAGTCTGGAACTCAAACC +
Preference number: 4 (lower is better)
Translates to: FSPAARPQGMPPAGSKAGADPRV*KSGTQT
Trigger: GGTTTGAGTTCCAGACTTGCAGACCCTGGGATCCGC...CCCAGCCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GCGTCTGAAAGCAGGCCGCGCCGGGCGGCGGGCAGGCGGGCAAAGGCGGACAGGAAGTACACAAGAACATaGGCATCACACATGCATACG +
Preference number: 4 (lower is better)
Translates to: ASESRPRRAAGRRAKADRKYTRT*ASHMHT
Trigger: CGTATGCATGTGTGATGCGCATGTTCTTGTGTACTT...CCTGTCCGCCTTTGCCCGCCTGCCCGCCGCCCGGCGCGGCCTGCTTTCAGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCGTGTTGTCCTCCTCGTaGGCCCGTGCAGCCACAATG +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGVLSSS*ARAATM
Trigger: CATTGTGGCTGCACGGGCCCACGAGGAGGACAACAC...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCGGCCCAGCGCCTTaGCGATGCCCTTGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPSGPAP*RCPCLG
Trigger: TCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGA...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCATATCAAGGAGACACTaGCAGTCCCTGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSISRRH*QSLGLQ
Trigger: CTGGAGGCCCAGGGACTGCCAGTGTCTCCTTGATAT...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAGGGGGCCAGACCACATaGCAGCTTCAGCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAGGQTT*QLQHKQ
Trigger: CTGCTTGTGCTGAAGCTGCCATGTGGTCTGGCCCCC...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCAGGCGCGGATCACCTTaGGGCTGTAGTAGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTRRGSP*GCSSSA
Trigger: TGCGCTACTACTACAGCCGCAAGGTGATCCGCGCCT...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACCACCTGGCCCGCCCTaGCCCTCCTGCCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLSEPPGGGSARINIKETPPGPP*PSCPQH
Trigger: ATGCTGGGGGCAGGAGGGGCAGGGCGGGCCAGGTGG...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCACGTCAGTGCACATGTaGAGAGCAGTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSTSVHM*RAVRSQ
Trigger: CTGGGATCTCACTGCTCTGCACATGTGCACTGACGT...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp AAGGCACAGGACCAAGGGACGCTGGCAGCACCCCGACATGACACCCCCAAGACCTCGTCAGGCCTGCAGTaGTCGTCCAGTGAGGATGTC +
Preference number: 4 (lower is better)
Translates to: KAQDQGTLAAPRHDTPKTSSGLQ*SSSEDV
Trigger: GACATCCTCACTGGACGAGCACTGCAGGCCTGACGA...GGTCTTGGGGGTGTCATGTCGGGGTGCTGCCAGCGTCCCTTGGTCCTGTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCCCCGGCCCCAAGGCATaGCACCAGCCGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSPGPKA*HQPEAR
Trigger: CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGG...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GCCGCAGGCGGGGCCGGAGCCTGGCCCCGGGATCTGCTGCAGAGGTTCTGTGCTACGCATGCATGCTCATaGAACACACATGTACACTCT +
Preference number: 4 (lower is better)
Translates to: AAGGAGAWPRDLLQRFCATHACS*NTHVHS
Trigger: AGAGTGTACATGTGTGTTGCATGAGCATGCATGCGT...AGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGGCTCCGGCCCCGCCTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCAAGGGCGAGGGGCTATaGCGACAAACAACCCACCCC +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAKGEGL*RQTTHP
Trigger: GGGGTGGGTTGTTTGTCGCCATAGCCCCTCGCCCTT...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAAGCCATGGGAGTCACCTaGGTGATGACACCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TAKRSTHPATHPHHTGPEAMGVT*VMTPVS
Trigger: GCTGACTGGTGTCATCACCCAGGTGACTCCCATGGC...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGATAAGATTCACAGGGTaGACCGTCAGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AASHLLPGPKACHQPEARIRFTG*TVSQRQ
Trigger: CTGCCTCTGGCTGACGGTCCACCCTGTGAATCTTAT...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGAATGTACAGGGGAGTaGGGTCTGTACAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSECTGE*GLYSAL
Trigger: CAGAGCACTGTACAGACCCCACTCCCCTGTACATTC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCAGAGCAGGAGAGGGGTaGCCCCAGGACCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSRAGEG*PQDLVA
Trigger: GGCCACGAGGTCCTGGGGCCACCCCTCTCCTGCTCT...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CCTTCGCTCGCTTCTGAAGCGCCTCGTGAGAAGCATCCCTCCATGGCCCTGCACACATGTGCAGAGCAGTaGGATCCCAGGCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSLASEAPREKHPSMALHTCAEQ*DPRLEG
Trigger: TCCCTCCAGCCTGGGATCTCACTGCTCTGCACATGT...GTGCAGGGCCATGGAGGGATGCTTCTCACGAGGCGCTTCAGAAGCGAGCGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAAACTCACGGGCGCAGATaGCACCAGAATGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TAKRSTHPATHPHHTGPETHGRR*HQNERR
Trigger: CCTTCTCTCATTCTGGTGGCATCTGCGCCCGTGAGT...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCCTCAGGGACCAGGTCTaGAGCGACTCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPLRDQV*SDSHLG
Trigger: GCCCAGGTGTGAGTCGCTGCAGACCTGGTCCCTGAG...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCCATACACATGTGCATaGTCACCCATACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: AASHLLPGPKACHQPEARPYTCA*SPIHQP
Trigger: TGGCTGGTGTATGGGTGAGCATGCACATGTGTATGG...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCGTCCCCGGGGACATCTaGGAGAGGCCAGCACGATCC +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSVPGDI*ERPARS
Trigger: GGATCGTGCTGGCCTCTCCCAGATGTCCCCGGGGAC...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGGGCTGGGAGAAGCTGTaGGCTGGGCGCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRGWEKL*AGRCWQ
Trigger: CTGCCAACAGCGCCCAGCCCACAGCTTCTCCCAGCC...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CTGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGGGGAGGCGTGCTCCATaGCAGGAAATGACATCCAAT +
Preference number: 4 (lower is better)
Translates to: LAFPGPHHAEFEWWVPMGGRRAP*QEMTSN
Trigger: ATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCC...CCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACTGCCCTGGCGTCGGTaGGCTCCAACAGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GLSEPPGGGSARINIKETLPWRR*APTATP
Trigger: GGGGGTGGCTGTTGGAGCCCACCGACGCCAGGGCAG...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CCTTCGCTCGCTTCTGAAGCGCCTCGTGAGAAGCATCCCTCCATGGCCCTGCACAGCTACACATTGGCCTaGCAAGGGTTCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLASEAPREKHPSMALHSYTLA*QGFRAA
Trigger: AGCTGCCCGGAACCCTTGCCAGGCCAATGTGTAGCT...GTGCAGGGCCATGGAGGGATGCTTCTCACGAGGCGCTTCAGAAGCGAGCGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp TTCCAACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCAACACAAACGCCAATTaGGCGTCTGAAAGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FQQQNAPPTRPPTPITLGNTNAN*ASESRP
Trigger: CGGCCTGCTTTCAGACGCTCAATTGGCGTTTGTGTT...GCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGTTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGCCAGCGCCTTGGCGATaGCCTTGCCTCGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRPAPWR*PCLGNV
Trigger: CACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGG...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCGGCCCCGGGATCTGCTaGAGAGGTTCTGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPGPGIC*RGSVLG
Trigger: ACCAAGCACAGAACCTCTGCAGCAGATCCCGGGGCC...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCTGTGTGCATGCGGCATaGTCAGCCGGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSCVHAA*SAGPHP
Trigger: AGGGTGTGGCCCGGCTGAGCATGCCGCATGCACACA...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACTGGCACCCCCACCCTGGCTGTaGCACGGACGCCATGGGAGT +
Preference number: 4 (lower is better)
Translates to: SEPPGGGSARINIKETLAPPPWL*HGRHGS
Trigger: ACTCCCATGGCGTCCGTGGCACAGCCAGGGTGGGGG...TGCCAGTGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GCAGCTTCTCACCTGCTGCCCGGCCCCAAGGCATGCCACCAGCCGGAAGCAAGGCATGCGCATCACACATaGATACGTGCTCATGCATAC +
Preference number: 4 (lower is better)
Translates to: AASHLLPGPKACHQPEARHAHHT*IRAHAY
Trigger: GTATGCATGAGCACGTATGCATGTGTGATGCGCATG...CCTTGCTTCCGGCTGGTGGCATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CGCCATCCTTCACCCCACCATGGCCCCGGGAGGCATCACGCCACCTCTGGAAGCGCACAGCCACATATATaGAAGTACACACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RHPSPHHGPGRHHATSGSAQPHI*KYTHRH
Trigger: GTGCCTGTGTGTGTACTTGCATATATGTGGCTGTGC...GCTTCCAGAGGTGGCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGATGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACTGGCAGGCCCCAGGACCTCGTaGCCTCAGGCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SEPPGGGSARINIKETLAGPRTS*PQACCP
Trigger: TGGACAGCAGGCCTGAGGCCACGAGGTCCTGGGGCC...TGCCAGTGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGCCTGGCCCCGGGATCTaGTGCAGAGGTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRPGPGI*CRGSVL
Trigger: AAGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGG...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCGAGAGAAGGCCACACTaGCCAGGACTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPERRPH*PGLSEP
Trigger: GGGTTCTGAGAGTCCTGGGCAGTGTGGCCTTCTCTC...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACTGGCAGGCAGGGCAGCGTCATaGACAGCCGCGGTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SEPPGGGSARINIKETLAGRAAS*TAAVVQ
Trigger: TTGGACCACCGCGGCTGTCCATGACGCTGCCCTGCC...TGCCAGTGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CCTTCGCTCGCTTCTGAAGCGCCTCGTGAGAAGCATCCCTCCATGGCCCTGCACCCACCCCCATCACACTaGGCCAGAAACTGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: PSLASEAPREKHPSMALHPPPSH*ARNCVL
Trigger: TAAGACACAGTTTCTGGCCCAGTGTGATGGGGGTGG...GTGCAGGGCCATGGAGGGATGCTTCTCACGAGGCGCTTCAGAAGCGAGCGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGCAGATGCCACCAGAATaGGAGAAGGCCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRQMPPE*EKATLP
Trigger: GGGCAGTGTGGCCTTCTCTCATTCTGGTGGCATCTG...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCCCCAAGGCAGCGCCCTaGCCCTCCTCCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: THTLIHMCPLREVHKNMRPKAAP*PSSRRL
Trigger: CAGCCTCCGGGAGGAGGGGCAGGGCGCTGCCTTGGG...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCCCCGCACACCCTTCCTaGCATCTCTACCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSPAHPS*HLYQVL
Trigger: CAGGACTTGGTAGAGATGGCAGGAAGGGTGTGCGGG...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGAGCGTGTACATGCTTATaGACCTACAACATGCACGTG +
Preference number: 4 (lower is better)
Translates to: WLSPGLTTQSLSGGCPWGACTCL*TYNMHV
Trigger: CACGTGCATGTTGTAGGTGCATAAGCATGTACACGC...TCCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCTGGCCTCCCCGGACCTaGCCTGGAGCTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: THTLIHMCPLREVHKNMRWPPRT*PGAAQA
Trigger: GGCCTGGGCAGCTCCAGGGCAGGTCCGGGGAGGCCA...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAATCTCCGGGTCCAGTCTaGGCAGGGCGGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKSPGPV*AGRQGG
Trigger: CCCGCCCTGCCGCCCTGCCCAGACTGGACCCGGAGA...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCTCCAGGGTGTTGGTTTCAGGCTaGGAGAAGCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WEACSMAGNDIQSGFPSRVLVSG*EKLWAG
Trigger: CCCAGCCCACAGCTTCTCCCAGCCTGAAACCAACAC...CCTGGAGGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACAGAAGCACAGCAGCCGTaGCGCGGAGGAGTAAGCGGA +
Preference number: 4 (lower is better)
Translates to: GLSEPPGGGSARINIKETEAQQP*RGGVSG
Trigger: TCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTC...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CAA 72 bp GGGAGTGGGGTCTGTACAGTGCTCTGCACACCTCAATaGCTAACAGGACAAAAGGCCCTTGGACGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSGVCTVLCTPQ*LTGQKALGRRA
Trigger: AGCCCTGCGTCCAAGGGCCTTTTGTCCTGTTAGCAATTGAGGTGTGCAGAGCACTGTACAGACCCCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCCAGGGCGGGGCTGTGTaGATGCGGCATGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: THTLIHMCPLREVHKNMRQGGAV*MRHAQP
Trigger: CGGCTGAGCATGCCGCATGCACACAGCCCCGCCCTG...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCTGGGACCCAGTTCCGTaGCCCACCCTGCCTGCCACG +
Preference number: 4 (lower is better)
Translates to: THTLIHMCPLREVHKNMRWDPVP*PTLPAT
Trigger: CGTGGCAGGCAGGGTGGGCCACGGAACTGGGTCCCA...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CAGCGTCATGGACAGCCGCGGTGGTCCAAGATGCCACTCTTCAGGTGGCAAGCCAAATACATCCAACAATaGTATGTCCGGCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: QRHGQPRWSKMPLFRWQAKYIQQ*YVRLAI
Trigger: GATGGCGAGCCGGACATACCATTGTTGGATGTATTT...GGCTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATGACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAACCCTGCACGTGGCCTTaGTGCCTGGGACCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKPCTWP*CLGPSS
Trigger: GGAACTGGGTCCCAGGCATCAAGGCCACGTGCAGGG...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCATGCAAGAAAATAGGGTaGCGATTTCTGTACAGTCTA +
Preference number: 4 (lower is better)
Translates to: SGSTAAVARRSKRIPGSACKKIG*RFLYSL
Trigger: TAGACTGTACAGAAATCGGCACCCTATTTTCTTGCA...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCGCCAGCACGATCCAGTaGGCACTGGGGAGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: THTLIHMCPLREVHKNMRASTIQ*ALGRGV
Trigger: GACCCCTCTCCCCAGTGCCCACTGGATCGTGCTGGC...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATACTGCAGGCCAGGGCTaGGAGGCGTGCTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNTAGQG*EACSMA
Trigger: TGCCATGGAGCACGCCTCCCAGCCCTGGCCTGCAGT...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATGAGAGACCAGGAGCATaGCCAGCGGAAGCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNERPGA*PAEAEA
Trigger: CGCCTCGGCTTCCGCTGGCCATGCTCCTGGTCTCTC...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCCAGGGTCTGCAAGTCTaGAACTCAAACCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSQGLQV*NSNPKC
Trigger: ACACTTGGGGTTTGAGTTCCAGACTTGCAGACCCTG...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAATCCTTCACCCCACCATaGCCCCGGGAGGCATCACGC +
Preference number: 4 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKSFTPP*PREASR
Trigger: GCGTGATGCCTCCCGGGGCCATGGTGGGGTGAAGGA...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp ACTCATACACTCATACATATGTGCCCCCTCAGAGAAGTACACAAGAACATGCGCGCAGTGCTCGTCCAGTaGGGATGTCCTCCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: THTLIHMCPLREVHKNMRAVLVQ*GCPPSP
Trigger: GGGCGAAGGAGGACATCCTCACTGGACGAGCACTGC...GCGCATGTTCTTGTGTACTTCTCTGAGGGGGCACATATGTATGAGTGTATGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACACAGGGTGCGCGACTaGAGCGCCAGCCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTHRVRD*SASPRG
Trigger: CCCCCGTGGGCTGGCGCTGCAGTCGCGCACCCTGTG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCGCTCACGCGTGTACATaGTTATGCACCTACAACATG +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSAHACT*LCTYNM
Trigger: CATGTTGTAGGTGCATAAGCATGTACACGCGTGAGC...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR TCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCCAACTCTGGTTTTATTaGAAAACAGCAGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPQLWFY*KTAALG
Trigger: CCCCAATGCTGCTGTTTTTCAATAAAACCAGAGTTG...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCGTCTGTACAGTGCTCTaGACACCTCAATTGCTAACA +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSVCTVL*TPQLLT
Trigger: TGTTAGCAATTGAGGTGTGCAGAGCACTGTACAGAC...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATCACGCAGAGTTTGAGTaGTGGGTGCCCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNHAEFE*WVPMGS
Trigger: GCTCCCCATGGGCACCCACCACTCAAACTCTGCGTG...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACACTGGCACTGTTTTGGCACATCTaGGGCCTCAGAACAATCTGC +
Preference number: 4 (lower is better)
Translates to: SEPPGGGSARINIKETLALFWHI*GLRTIC
Trigger: GCAGATTGTTCTGAGGCCCCAGATGTGCCAAAACAG...TGCCAGTGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCCATGTACACAACTCATaGACATGTACACCTATACAC +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPHVHNS*TCTPIH
Trigger: GTGTATAGGTGTACATGTGCATGAGTTGTGTACATG...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCACATTCATACACACGTaGATGCTTATGCATACCCAA +
Preference number: 4 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPTFIHT*MLMHTQ
Trigger: TTGGGTATGCATAAGCATGCACGTGTGTATGAATGT...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCATGCATACGTGCTCATaGATACACACGCACATTCAT +
Preference number: 4 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSMHTCS*IHTHIH
Trigger: ATGAATGTGCGTGTGTATGCATGAGCACGTATGCAT...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAACACCAAGCTACACATTaGCCTGGCAAGGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKHQATH*PGKGSG
Trigger: CCCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTG...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAAATCTGCCCCCGCCGTaGGCTCACAGTACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKNLPPP*AHSTVS
Trigger: CGAAACTGTACTGTGAGCCCACGGCGGGGGCAGATT...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACAGGGCAGCTTCTCACCTaGTGCCCGGCCCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTGQLLT*CPAPRH
Trigger: ATGCCTTGGGGCCGGGCAGCAGGTGAGAAGCTGCCC...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACGCGGTGGTCCAAGATaGCACTCTTCAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTRGGPR*HSSGGK
Trigger: CTTGCCACCTGAAGAGTGGCATCTTGGACCACCGCG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACAGTCCCCTCTAGGGCCTaGAGCCTTCTGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTVPSRA*SLLPSS
Trigger: AGAAGATGGCAGAAGGCTGCAGGCCCTAGAGGGGAC...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACATGGACAGCCGCGGTaGTCCAAGATGCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTHGQPR*SKMPLF
Trigger: GAAGAGTGGCATCTTGGACCACCGCGGCTGTCCATG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACCACCGCCGGGTACCTaGACAGCCACATATATGCAA +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTPPPGT*TATYMQ
Trigger: TTGCATATATGTGGCTGTGCAGGTACCCGGCGGTGG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACAAGGCACTCGCACGCATaGATGCTCATGCAACACACA +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTRHSHA*MLMQHT
Trigger: TGTGTGTTGCATGAGCATGCATGCGTGCGAGTGCCT...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR GCA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACATATGCACCTACAACATaGACGTGCACAGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LTKSELQENRVPISVQSTYAPTT*TCTGSH
Trigger: GTGTGAGCCTGTGCACGTGCATGTTGTAGGTGCATA...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
3UTR CAA 72 bp GGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTaGTCCCAAGAATTAAAGTCATGCAGAGTGCTATTC +
Preference number: 4 (lower is better)
Translates to: GQKLCLRVQTTV*SQELKSCRVLF
Trigger: GAATAGCACTCTGCATGACTTTAATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 90 bp GCGGGGGCCACATGGCGCCGGCGGCGGCGAGCAGCGCGTCCTTCTTaGCCCCCGGCAGCGCCTCATGGTCCTCGGCGGCCACGATCTTCG +
Preference number: 5 (lower is better)
Translates to: AGATWRRRRRAARPS*PPAAPHGPRRPRSS
Trigger: CGAAGATCGTGGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCTCGCCGCCGCCGGCGCCATGTGGCCCCCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 90 bp CCACGATCTTCGTCTCGCAGACCATGTCGGGAGGCCCACAATGCATaGACCCGGCCGGGCGGCGCGGCAGCGGGGACGCGGCCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: PRSSSRRPCREAHNA*TRPGGAAAGTRPGG
Trigger: GCCGCCCGGCCGCGTCCCCGCTGCCGCGCCGCCCGGCCGGGTGCATGCATTGTGGGCCTCCCGACATGGTCTGCGAGACGAAGATCGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 90 bp GCGGCGGCGAGCAGCGCGTCCTTCTTGGCCCCCGGCAGCGCCTCATaGTCCTCGGCGGCCACGATCTTCGTCTCGCAGACCATGTCGGGA +
Preference number: 5 (lower is better)
Translates to: AAASSASFLAPGSAS*SSAATIFVSQTMSG
Trigger: TCCCGACATGGTCTGCGAGACGAAGATCGTGGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCTCGCCGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 90 bp CCATGTCCGTGTGCAGCGCGCACTCCAGGTAGGCGCGGATCACCTTaGGGCTGTAGTAGTAGCGCAGGCCCAGCAGCGCGGCCGGCACCA +
Preference number: 5 (lower is better)
Translates to: PCPCAARTPGRRGSP*GCSSSAGPAARPAP
Trigger: TGGTGCCGGCCGCGCTGCTGGGCCTGCGCTACTACTACAGCCGCAAGGTGATCCGCGCCTACCTGGAGTGCGCGCTGCACACGGACATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp GCCGCAGGCGGGGCCGGAGCCTGGCCCCGGGATCTGCTGCAGAGGTTCTGTGCTCCACCAAGCTACACATaGGCCTGGCAAGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: AAGGAGAWPRDLLQRFCAPPSYT*AWQGFR
Trigger: CCGGAACCCTTGCCAGGCCAATGTGTAGCTTGGTGG...AGCACAGAACCTCTGCAGCAGATCCCGGGGCCAGGCTCCGGCCCCGCCTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp TGGCTTTCCCCGGGCCTCACCACGCAGAGTTTGAGTGGTGGGTGCCCATGGGGAAGACTGACCCAGCCCTaGGCCCCTCCCTCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: WLSPGLTTQSLSGGCPWGRLTQP*APPSGG
Trigger: GCCCCCGGAGGGAGGGGCCAAGGGCTGGGTCAGTCT...TCCCCATGGGCACCCACCACTCAAACTCTGCGTGGTGAGGCCCGGGGAAAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 90 bp GCAGCTCCACCGTGTTGTCCTCCTCGTGGGCCCGTGCAGCCACAATaGCCACCACGTTGCCATCCAGCACGGCCACCCAGAAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: AAPPCCPPRGPVQPQ*PPRCHPARPPRSRS
Trigger: GCTCCTGCTTCTGGGTGGCCGTGCTGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGGTGGAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 90 bp CGGCGAACTCCAGCACCTTCCGGCCCAGCGCCTTGGCGATGCCCTTaGCTCGGAAACGTGAGTCCACAGACATCCGCAGCAGCTCCACCG +
Preference number: 5 (lower is better)
Translates to: RRTPAPSGPAPWRCP*LGNVSPQTSAAAPP
Trigger: CGGTGGAGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 90 bp AGACATCCGCAGCAGCTCCACCGTGTTGTCCTCCTCGTGGGCCCGTaGAGCCACAATGCCCACCACGTTGCCATCCAGCACGGCCACCCA +
Preference number: 5 (lower is better)
Translates to: RHPQQLHRVVLLVGP*SHNAHHVAIQHGHP
Trigger: TGGGTGGCCGTGCTGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGGTGGAGCTGCTGCGGATGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 90 bp GCACCACGGCGAACTCCAGCACCTTCCGGCCCAGCGCCTTGGCGATaGCCTTGCCTCGGAAACGTGAGTCCACAGACATCCGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: APRRTPAPSGPAPWR*PCLGNVSPQTSAAA
Trigger: AGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCGTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAAGCAGCTCCACCGTGTaGTCCTCCTCGTGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: SGSTAAVARRSKRIPGSASSSTV*SSSWAR
Trigger: ACGGGCCCACGAGGAGGACAACACGGTGGAGCTGCT...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS TCA 90 bp CACCTTCCGGCCCAGCGCCTTGGCGATGCCCTTGCCTCGGAAACGTaGGTCCACAGACATCCGCAGCAGCTCCACCGTGTTGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HLPAQRLGDALASET*VHRHPQQLHRVVLL
Trigger: GAGGAGGACAACACGGTGGAGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 90 bp GAGTCCACAGACATCCGCAGCAGCTCCACCGTGTTGTCCTCCTCGTaGGCCCGTGCAGCCACAATGCCCACCACGTTGCCATCCAGCACG +
Preference number: 5 (lower is better)
Translates to: ESTDIRSSSTVLSSS*ARAATMPTTLPSST
Trigger: CGTGCTGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGGTGGAGCTGCTGCGGATGTCTGTGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp ACAGCAAAACGCTCCACCCACCCGGCCACCCACCCCCATCACACTGGGCCAGAAACAATGCCCACCACGTaGCCATCCAGCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: TAKRSTHPATHPHHTGPETMPTT*PSSTAT
Trigger: GGTGGCCGTGCTGGATGGCAACGTGGTGGGCATTGT...TTCTGGCCCAGTGTGATGGGGGTGGGTGGCCGGGTGGGTGGAGCGTTTTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCAGCCTTGGCGATGCCCTaGCCTCGGAAACGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAALAMP*PRKRES
Trigger: GGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGC...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 90 bp AGTTGTGCACCACGGCGAACTCCAGCACCTTCCGGCCCAGCGCCTTaGCGATGCCCTTGCCTCGGAAACGTGAGTCCACAGACATCCGCA +
Preference number: 5 (lower is better)
Translates to: SCAPRRTPAPSGPAP*RCPCLGNVSPQTSA
Trigger: TGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCGTGGTGCACAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp GCGTCTGAAAGCAGGCCGCGCCGGGCGGCGGGCAGGCGGGCAAAGGCGGACAGGTTATTAGAAAATGTGTaGGTTTCAGGCTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ASESRPRRAAGRRAKADRLLENV*VSGWEK
Trigger: CTTCTCCCAGCCTGAAACCAACACATTTTCTAATAA...CCTGTCCGCCTTTGCCCGCCTGCCCGCCGCCCGGCGCGGCCTGCTTTCAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp TCTGGAAGCACAGCAGCCGTGGCGCGGAGGAGTAAGCGGATCCCAGGGTCTGCACAGGACAAAAGGCCCTaGGACGCAGGGCTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SGSTAAVARRSKRIPGSAQDKRP*DAGLLC
Trigger: ACAGAGAAGCCCTGCGTCCAAGGGCCTTTTGTCCTG...TGCAGACCCTGGGATCCGCTTACTCCTCCGCGCCACGGCTGCTGTGCTTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp GGCTATGGCGACAAACAACCCACCCCCACCAAAGTGTCGCCGAAGAACAACAGCCTCACCACGCAGAGTTaGAGTGGTGGGTGCCCATGG +
Preference number: 5 (lower is better)
Translates to: GYGDKQPTPTKVSPKNNSLTTQS*SGGCPW
Trigger: CCATGGGCACCCACCACTCAAACTCTGCGTGGTGAG...GCTGTTGTTCTTCGGCGACACTTTGGTGGGGGTGGGTTGTTTGTCGCCATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATAGCAGCGCGTCCTTCTaGGCCCCCGGCAGCGCCTCA +
Preference number: 5 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNSSASF*APGSAS
Trigger: TGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCT...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAATTCCGGCCCAGCGCCTaGGCGATGCCCTTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKFRPSA*AMPLPR
Trigger: CCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAA...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp CAGGGCTGGGAGGCGTGCTCCATGGCAGGAAATGACATCCAATCAGGGTTTCCCGACAACCGCAGGATGTaGAAAAGGGGAAACCCAACA +
Preference number: 5 (lower is better)
Translates to: QGWEACSMAGNDIQSGFPDNRRM*KRGNPT
Trigger: TGTTGGGTTTCCCCTTTTCAACATCCTGCGGTTGTC...GGGAAACCCTGATTGGATGTCATTTCCTGCCATGGAGCACGCCTCCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp ATGCTCACACTACACATATCCAAGAACCCACTTGCACACACACACACGCTCAAAACCCTGGGGGCTGTTTaGGCACATCTGGGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: MLTLHISKNPLAHTHTLKTLGAV*AHLGPQ
Trigger: CTGAGGCCCCAGATGTGCCAAAACAGCCCCCAGGGT...TTTGAGCGTGTGTGTGTGTGCAAGTGGGTTCTTGGATATGTGTAGTGTGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp GGACTCTCAGAACCCCCAGGAGGGGGATCTGCTAGGATCAATATCAAGGAGACAGTACAAACTACCGTTTaGTCCCAAGAATTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: GLSEPPGGGSARINIKETVQTTV*SQELKS
Trigger: TGACTTTAATTCTTGGGACAAAACGGTAGTTTGTAC...TGTCTCCTTGATATTGATCCTAGCAGATCCCCCTCCTGGGGGTTCTGAGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp TTAACAAAATCTGAGCTGCAAGAAAATAGGGTGCCGATTTCTGTACAGTCTACACTCTGCACACCTCAATaGCTAACAGGACAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LTKSELQENRVPISVQSTLCTPQ*LTGQKA
Trigger: GGCCTTTTGTCCTGTTAGCAATTGAGGTGTGCAGAG...TGTAGACTGTACAGAAATCGGCACCCTATTTTCTTGCAGCTCAGATTTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS-3UTR CAA 90 bp CACTGGGCCAGAAACTGTGTCTTAGGGTACAAACTACCGTTTTGTCCCAAGAATTCAACTCTGGTTTTATaGAAAAACAGCAGCATTGGG +
Preference number: 5 (lower is better)
Translates to: HWARNCVLGYKLPFCPKNSTLVL*KNSSIG
Trigger: CCCAATGCTGCTGTTTTTCAATAAAACCAGAGTTGA...ATTCTTGGGACAAAACGGTAGTTTGTACCCTAAGACACAGTTTCTGGCCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CAA 72 bp CACATGGCGCCGGCGGCGGCGAGCAGCGCGTCCTTCTaGGCCCCCGGCAGCGCCTCATGGTCCTCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: HMAPAAASSASF*APGSASWSSAA
Trigger: GGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCTCGCCGCCGCCGGCGCCATGTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CAA 90 bp AGCGGGGGCCACATGGCGCCGGCGGCGGCGAGCAGCGCGTCCTTCTaGGCCCCCGGCAGCGCCTCATGGTCCTCGGCGGCCACGATCTTC +
Preference number: 6 (lower is better)
Translates to: SGGHMAPAAASSASF*APGSASWSSAATIF
Trigger: GAAGATCGTGGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCTCGCCGCCGCCGGCGCCATGTGGCCCCCGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 72 bp ACATGGCGCCGGCGGCGGCGAGCAGCGCGTCCTTCTTaGCCCCCGGCAGCGCCTCATGGTCCTCGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: TWRRRRRAARPS*PPAAPHGPRRP
Trigger: TGGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCTCGCCGCCGCCGGCGCCATGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp ATCTTCGTCTCGCAGACCATGTCGGGAGGCCCACAATaGATGCACCCGGCCGGGCGGCGCGGCAGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: IFVSQTMSGGPQ*MHPAGRRGSGD
Trigger: GTCCCCGCTGCCGCGCCGCCCGGCCGGGTGCATGCATTGTGGGCCTCCCGACATGGTCTGCGAGACGAAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 72 bp AGCAGCGCGTCCTTCTTGGCCCCCGGCAGCGCCTCATaGTCCTCGGCGGCCACGATCTTCGTCTCGCAGACC +
Preference number: 6 (lower is better)
Translates to: SSASFLAPGSAS*SSAATIFVSQT
Trigger: GGTCTGCGAGACGAAGATCGTGGCCGCCGAGGACCATGAGGCGCTGCCGGGGGCCAAGAAGGACGCGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS TCA 72 bp AGCCCAGCGACTCGTAGAGCTTGTGGGCGGCCACCTTaGCGGCCGTCGTGCCCAGCACCACCGCGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: SPATRRACGRPP*RPSCPAPPRSS
Trigger: ACTACTCCGCGGTGGTGCTGGGCACGACGGCCGTCAAGGTGGCCGCCCACAAGCTCTACGAGTCGCTGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp TGTGCAGCGCGCACTCCAGGTAGGCGCGGATCACCTTaGGGCTGTAGTAGTAGCGCAGGCCCAGCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: CAARTPGRRGSP*GCSSSAGPAAR
Trigger: CCGCGCTGCTGGGCCTGCGCTACTACTACAGCCGCAAGGTGATCCGCGCCTACCTGGAGTGCGCGCTGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp CCGTGTTGTCCTCCTCGTGGGCCCGTGCAGCCACAATaGCCACCACGTTGCCATCCAGCACGGCCACCCAGA +
Preference number: 6 (lower is better)
Translates to: PCCPPRGPVQPQ*PPRCHPARPPR
Trigger: TCTGGGTGGCCGTGCTGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CCA 72 bp CCACGGCGAACTCCAGCACCTTCCGGCCCAGCGCCTTaGCGATGCCCTTGCCTCGGAAACGTGAGTCCACAG +
Preference number: 6 (lower is better)
Translates to: PRRTPAPSGPAP*RCPCLGNVSPQ
Trigger: CTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CAA 90 bp ACGGCGAACTCCAGCACCTTCCGGCCCAGCGCCTTGGCGATGCCCTaGCCTCGGAAACGTGAGTCCACAGACATCCGCAGCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: TANSSTFRPSALAMP*PRKRESTDIRSSST
Trigger: GGTGGAGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS TCA 72 bp CCGGCAGCACGTAGTGGTCACTGGCGCCCATGTGTCTaGAGCCCAGCGACTCGTAGAGCTTGTGGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: PAARSGHWRPCV*SPATRRACGRP
Trigger: TGGCCGCCCACAAGCTCTACGAGTCGCTGGGCTTCAGACACATGGGCGCCAGTGACCACTACGTGCTGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp CAGCAGCTCCACCGTGTTGTCCTCCTCGTGGGCCCGTaGAGCCACAATGCCCACCACGTTGCCATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: QQLHRVVLLVGP*SHNAHHVAIQH
Trigger: GTGCTGGATGGCAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGGTGGAGCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp CCAGCACCTTCCGGCCCAGCGCCTTGGCGATGCCCTTaGCTCGGAAACGTGAGTCCACAGACATCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: PAPSGPAPWRCP*LGNVSPQTSAA
Trigger: TGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp CCTGGAAGAAGAGGCGCTCAGCCAGCGAGAGGGTCATaGCCGGCAGCACGTAGTGGTCACTGGCGCCCATGT +
Preference number: 6 (lower is better)
Translates to: PGRRGAQPARGS*PAARSGHWRPC
Trigger: ACATGGGCGCCAGTGACCACTACGTGCTGCCGGGCATGACCCTCTCGCTGGCTGAGCGCCTCTTCTTCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CAA 72 bp TCCAGCACCTTCCGGCCCAGCGCCTTGGCGATGCCCTaGCCTCGGAAACGTGAGTCCACAGACATCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SSTFRPSALAMP*PRKRESTDIRS
Trigger: GCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CAA 72 bp ACCACGGCGAACTCCAGCACCTTCCGGCCCAGCGCCTaGGCGATGCCCTTGCCTCGGAAACGTGAGTCCACA +
Preference number: 6 (lower is better)
Translates to: TTANSSTFRPSA*AMPLPRKREST
Trigger: TGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCGCCGTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS TCA 72 bp GCCCAGCGCCTTGGCGATGCCCTTGCCTCGGAAACGTaGGTCCACAGACATCCGCAGCAGCTCCACCGTGTT +
Preference number: 6 (lower is better)
Translates to: AQRLGDALASET*VHRHPQQLHRV
Trigger: AACACGGTGGAGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS GCA 72 bp CGAACTCCAGCACCTTCCGGCCCAGCGCCTTGGCGATaGCCTTGCCTCGGAAACGTGAGTCCACAGACATCC +
Preference number: 6 (lower is better)
Translates to: RTPAPSGPAPWR*PCLGNVSPQTS
Trigger: GGATGTCTGTGGACTCACGTTTCCGAGGCAAGGGCATCGCCAAGGCGCTGGGCCGGAAGGTGCTGGAGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3
CDS CAA 90 bp CCTCGGAAACGTGAGTCCACAGACATCCGCAGCAGCTCCACCGTGTaGTCCTCCTCGTGGGCCCGTGCAGCCACAATGCCCACCACGTTG +
Preference number: 6 (lower is better)
Translates to: PRKRESTDIRSSSTV*SSSWARAATMPTTL
Trigger: CAACGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACAACACGGTGGAGCTGCTGCGGATGTCTGTGGACTCACGTTTCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423729.3