RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAT10 (Homo sapiens)

Ensembl gene IDs: ENSG00000135372

Ensembl transcript IDs: ENST00000257829.8, ENST00000527971.5, ENST00000529523.5, ENST00000530017.1, ENST00000531159.6, ENST00000531723.1, ENST00000532503.5, ENST00000532555.1, ENST00000534509.1, ENST00000615292.1

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGAGTTTCTCTTCACTATTTCTTCCGC +
Preference number: 1 (lower is better)
Translates to: NSPAREGSVSESIFP*SNTDARVSLHYFFR
Trigger: GCGGAAGAAATAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615292.1
3UTR-3UTR CCA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGGGTCGAGAGGCAACGTaGCTTCCACATGTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: AMYLRASGGREATWLPHVGREAT*LPHVWE
Trigger: TTCCCACACATGTGGAAGCCACGTTGCCTCTCGACC...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR TCA 90 bp TTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGA +
Preference number: 2 (lower is better)
Translates to: LSSQTHRPRGRIRGQLPGESIFP*SNTDAR
Trigger: TCGGGCATCTGTGTTTGATCATGGGAAGATACTCTC...ACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR TCA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTAGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGA +
Preference number: 2 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLESIFP*SNTDAR
Trigger: TCGGGCATCTGTGTTTGATCATGGGAAGATACTCTC...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR TCA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGA +
Preference number: 2 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLESIFP*SNTDAR
Trigger: TCGGGCATCTGTGTTTGATCATGGGAAGATACTCTC...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR TCA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGAGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGA +
Preference number: 2 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRESIFP*SNTDAR
Trigger: TCGGGCATCTGTGTTTGATCATGGGAAGATACTCTC...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR GCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAATGATCAAACACAGATaGCCGAGTTTCTCTTCACTA +
Preference number: 2 (lower is better)
Translates to: QKAMYLRASGGREATWLPMIKHR*PSFSSL
Trigger: TAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCAT...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615292.1
3UTR-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGCTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 3 (lower is better)
Translates to: PPGHHQKAMYLRASGGRELPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
3UTR-3UTR CAA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGCTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 3 (lower is better)
Translates to: AMYLRASGGREATWLPHVLPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR CAA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGATGCCGGGGCCTCTCGTaGCTTTTAACAGTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRCRGLS*LLTVQP
Trigger: TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCA...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGCTGTTCTTCAACTTCTaGCTCTGTTTGGGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: PPGHHQKAMYLRASGGRELFFNF*LCLGSC
Trigger: ACAAGAACCCAAACAGAGCAAGAAGTTGAAGAACAG...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615292.1
3UTR-3UTR CAA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCATCTAAAGAGACCCATTaGGGAGTGACTCTGCCTTTA +
Preference number: 3 (lower is better)
Translates to: RALDWAGRERLVAILEMASKETH*GVTLPL
Trigger: TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGA...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR CAA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTTGTTTGGGTTCTTGTTaGGCCTCTAACTTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSCLGSC*ASNFLF
Trigger: GAAAAGGAAGTTAGAGGCCAAACAAGAACCCAAACA...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615292.1
3UTR TCA 72 bp GGGAATGAGACTAAAAAGCTGGCTCAAAGCAAAATATaGACTTATAGGAAAGGAGGGCCCTGGACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GNETKKLAQSKI*TYRKGGPWTGQ
Trigger: CTGCCCAGTCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR-3UTR CAA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 3 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGLPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
3UTR TCA 72 bp GCCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGAGTTTCTCTTCACTAT +
Preference number: 3 (lower is better)
Translates to: AREGSVSESIFP*SNTDARVSLHY
Trigger: ATAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615292.1
CDS-3UTR TCA 90 bp CACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCAAGAGAAGAGCCGACTaGGCCGCAGACAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HTGPEAEFAASFQVCRGLKRRAD*AADRAR
Trigger: CCTGGCCCTGTCTGCGGCTCAGTCGGCTCTTCTCTT...GAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTCATCCGGAGTCTaGGGAGGCAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGLSSGV*GGRASM
Trigger: CATGGAGGCCCTGCCTCCCCAGACTCCGGATGAGAG...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGAGGCAGAAGAGATGGTaGGCAGGTGCATCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGRQKRW*AGASES
Trigger: GCTCTCCGATGCACCTGCTCACCATCTCTTCTGCCT...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCGTTTCCAGAACTTaGGGAGCCTGGGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGLVSRT*GAWGSS
Trigger: GCTTGACCCCCAGGCTCCTCAAGTTCTGGAAACGAG...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTGCTGCAGAGCACGGCTaGCATAGCCCATCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASAAEHG*HSPSLD
Trigger: ATCAAGGGATGGGCTATGGCAGCCGTGCTCTGCAGC...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGGTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCCACCTAACCGCGGGCTaGCATGGATGCCGGGACGGA +
Preference number: 4 (lower is better)
Translates to: QVELTDTQAQRPNSRPASHLTAG*HGCRDG
Trigger: TCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTG...GGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR GCA 90 bp CAAACCCTGGCGCACCTAACCGCGGGCTGCCATGGATGCCGGGACGGACTGGAGCTGGGACAGTGGGTCTaGTGGAGCCAAGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QTLAHLTAGCHGCRDGLELGQWV*WSQEWN
Trigger: GTTCCACTCTTGGCTCCAGCAGACCCACTGTCCCAG...CTCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTGCGCCAGGGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCAACACACCCACAGGCTaGGTGTCCTGCAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGNTPTG*VSCKLS
Trigger: GGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTT...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAAAGAGAAGAGCCGACTaGGCCGCAGACAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AASFQVCRGLSLLLTVQPKRRAD*AADRAR
Trigger: CCTGGCCCTGTCTGCGGCTCAGTCGGCTCTTCTCTT...TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCTGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTATTCTTTTCTTCCGGTaGCTGCGCCCCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCILFFR*LRPEPG
Trigger: CCCGGGCTCGGGGCGCAGTCACCGGAAGAAAAGAAT...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531159.6
CDS-3UTR GCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCCTGCAGCACACACATaGCGAAGGTATTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGPAAHT*RRYCPG
Trigger: TCCTGGGCAATACCTTCGGCATGTGTGTGCTGCAGG...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTGAGATGGTGAGCAGGTaGATCGGAGAGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASEMVSR*IGEHLE
Trigger: CTCCAGATGCTCTCCGATGCACCTGCTCACCATCTC...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTGGTCCACAGACTTATaGTGCAGGCCAATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HTGPEAEFAASFQVCRGLWSTDL*CRPIPK
Trigger: CTTGGGGATTGGCCTGCAGCATAAGTCTGTGGACCA...GAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGAGGCAGGGCCTCCATaGTGGCAACGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCEAGPP*WQRGRR
Trigger: TCTCCTCCCACGTTGCCACCATGGAGGCCCTGCCTC...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTCTCTCATCCGGAGTCTaGGGAGGCAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCLSSGV*GGRASM
Trigger: CATGGAGGCCCTGCCTCCCCAGACTCCGGATGAGAG...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTAAGAGAAGAGCCGACTaGGCCGCAGACAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETKRRAD*AADRAR
Trigger: CCTGGCCCTGTCTGCGGCTCAGTCGGCTCTTCTCTT...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCACATGCCGAAGGTATTaGCCAGGATCTTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: HTGPEAEFAASFQVCRGLTCRRY*PGSCGS
Trigger: AGACCCACAAGATCCTGGGCAATACCTTCGGCATGT...GAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp CAAACCCTGGCGCACCTAACCGCGGGCTGCCATGGATGCCGGGACGGACTGGAGAGCATGATGCACGAGTaGTCTCCGGTCAGGTCATTC +
Preference number: 4 (lower is better)
Translates to: QTLAHLTAGCHGCRDGLESMMHE*SPVRSF
Trigger: GAATGACCTGACCGGAGAGCACTCGTGCATCATGCT...CTCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTGCGCCAGGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR GCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCTTCGCTGCCACCATCTaGTCCTCAATGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGFAATI*SSMAFS
Trigger: GGAAAAGGCCATTGAGGAGCAGATGGTGGCAGCGAA...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTGCAGGGCCTCCATGGTaGCAACGTGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETAGPPW*QRGRRW
Trigger: CCATCTCCTCCCACGTTGCCACCATGGAGGCCCTGC...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTACGGCTCAGGGCAGGCTaGGCTGGCTTCCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLRLRAG*AGFPMF
Trigger: GAACATGGGGAAGCCAGCCCAGCCTGCCCTGAGCCG...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAAACCCTGGCGCACCTAACCGCGGGCTGCCATGGATGCCGGGACGGACTGGAGAAAAGTCCCATCAACTaGCCCGAGGGCAGCTCAATC +
Preference number: 4 (lower is better)
Translates to: QTLAHLTAGCHGCRDGLEKSPIN*PEGSSI
Trigger: GATTGAGCTGCCCTCGGGCCAGTTGATGGGACTTTT...CTCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTGCGCCAGGGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CCA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGAACCGCGGGCTGCCATaGATGCCGGGACGGACTGGA +
Preference number: 4 (lower is better)
Translates to: AMYLRASGGREATWLPHVNRGLP*MPGRTG
Trigger: TCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTT...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR TCA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTCCTCTTCCAACAAGCTaGCAGCCTCGCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCPLPTS*QPRCLR
Trigger: CCGTAAGCAGCGAGGCTGTCAGCTTGTTGGAAGAGG...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTGTCCACCATATTCCGTaGATACATCTCCAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASVHHIP*IHLQPL
Trigger: AAGCGGCTGGAGATGTATTCACGGAATATGGTGGAC...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTACTGCCCCTAGCGTATaGCTGGTGTCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETTAPSV*LVSGSR
Trigger: ACGTGACCCGGACACCAGGCATACGCTAGGGGCAGT...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR GCA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGGGTTCAGGAAATAGATaGGAGAGATGGCCGGGATCA +
Preference number: 4 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGGSGNR*ERWPGS
Trigger: TGATCCCGGCCATCTCTCGCATCTATTTCCTGAACC...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGTCCACAGACTTATGCTaGAGGCCAATCCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGSTDLC*RPIPKR
Trigger: TCTCTTGGGGATTGGCCTGCAGCATAAGTCTGTGGA...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTCACCTAACCGCGGGCTaGCATGGATGCCGGGACGGA +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVHLTAG*HGCRDG
Trigger: TCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTG...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp GTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGAGAAGGGGAAGCACGTaGGAGCACGGAACAACTCCG +
Preference number: 4 (lower is better)
Translates to: VELTDTQAQRPNSRPASRRRGST*EHGTTP
Trigger: CGGAGTTGTTCCGTGCTCCCACGTGCTTCCCCTTCT...CCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CCA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGGGGGATCCCAGCCAGTaGAGAAGGGGAAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: AMYLRASGGREATWLPHVGDPSQ*RRGSTW
Trigger: CCACGTGCTTCCCCTTCTCCACTGGCTGGGATCCCC...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGAGGCAGGGCCTCCATaGTGGCAACGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSEAGPP*WQRGRR
Trigger: TCTCCTCCCACGTTGCCACCATGGAGGCCCTGCCTC...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGATCTGGCTGTCGTCGTaGTCTTATTCTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGIWLSS*SYSQQW
Trigger: CCACTGCTGAGAATAAGACCACGACGACAGCCAGAT...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCGGCTCAGGGCAGGCTaGGCTGGCTTCCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSRLRAG*AGFPMF
Trigger: GAACATGGGGAAGCCAGCCCAGCCTGCCCTGAGCCG...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp TTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTTGGTCCGTAGGAGGATaGCCACTAGCCCACCACCTT +
Preference number: 4 (lower is better)
Translates to: LSSQTHRPRGRIRGQLPGWSVGG*PLAHHL
Trigger: AAGGTGGTGGGCTAGTGGTCATCCTCCTACGGACCA...ACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp GGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGAGGGGCGTATCGGATTaGCTCCTGGAGGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: GHHQKAMYLRASGGREATRGVSD*LLEGNL
Trigger: GAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCT...CGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CCA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGTCCATGGTGGCAACGTaGGAGGAGATGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PPGHHQKAMYLRASGGRESMVAT*EEMGRM
Trigger: CATCCTGCCCATCTCCTCCCACGTTGCCACCATGGA...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp TCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCTCCATGGTGGCAACGTaGGAGGAGATGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SWAPPESDVLKGLRRSRGSMVAT*EEMGRM
Trigger: CATCCTGCCCATCTCCTCCCACGTTGCCACCATGGA...GCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTAACACACCCACAGGCTaGGTGTCCTGCAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETNTPTG*VSCKLS
Trigger: GGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTT...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGACAGACTGTTCAAGATaGACTGGCGAGAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGTDCSR*TGEKSP
Trigger: GGGAGATTTCTCGCCAGTCCATCTTGAACAGTCTGT...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCCCATCTGCTCCTCAATaGCCTTTTCCTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: HTGPEAEFAASFQVCRGLPSAPQ*PFPELH
Trigger: ATGAAGTTCAGGAAAAGGCCATTGAGGAGCAGATGG...GAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGCCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGGACAGTGGGTCTGCTaGAGCCAAGAGTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: QPPGHHQKAMYLRASGGRGQWVC*SQEWNS
Trigger: GCTGTTCCACTCTTGGCTCCAGCAGACCCACTGTCC...TCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGATCTTGGAACTGTTCTaGCACTGTCCATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGILELF*HCPWNQ
Trigger: CTGATTCCATGGACAGTGTCAGAACAGTTCCAAGAT...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGCCTGCAGCACACACATaGCGAAGGTATTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPGHHQKAMYLRASGGREPAAHT*RRYCPG
Trigger: TCCTGGGCAATACCTTCGGCATGTGTGTGCTGCAGG...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCGCCAATCCCAGGGCTaGAGATTTTCCCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSRQSQG*RFSPSS
Trigger: CGAGGACGGGGAAAATCTGCAGCCCTGGGATTGGCG...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGGCTGCAGAGCACGGCTaGCATAGCCCATCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AMYLRASGGREATWLPHVAAEHG*HSPSLD
Trigger: ATCAAGGGATGGGCTATGGCAGCCGTGCTCTGCAGC...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGGACCACATCCTTCGCTaGCACCATCTGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: VELTDTQAQRPNSRPASRDHILR*HHLLLN
Trigger: ATTGAGGAGCAGATGGTGGCAGCGAAGGATGTGGTC...CCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAAGAAGGGGAAGCACGTaGGAGCACGGAACAACTCCG +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSRRGST*EHGTTP
Trigger: CGGAGTTGTTCCGTGCTCCCACGTGCTTCCCCTTCT...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CCA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGAGCAGGGCCTCCATGGTaGCAACGTGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRAGPPW*QRGRRW
Trigger: CCATCTCCTCCCACGTTGCCACCATGGAGGCCCTGC...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGACTCTCATCCGGAGTCTaGGGAGGCAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRLSSGV*GGRASM
Trigger: CATGGAGGCCCTGCCTCCCCAGACTCCGGATGAGAG...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp TGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCATCTCTCATCCGGAGTCTaGGGAGGCAGGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WAGRERLVAILEMAVPSHLSSGV*GGRASM
Trigger: CATGGAGGCCCTGCCTCCCCAGACTCCGGATGAGAG...ATGGCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGAACACACCCACAGGCTaGGTGTCCTGCAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SFQVCRGLSLLLTVQPERNTPTG*VSCKLS
Trigger: GGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTT...CCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCGGTGTGAATTTCCTGTaGTGTCTCAAGGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGGVNFL*CLKDLF
Trigger: GAAAAGGTCCTTGAGACACCACAGGAAATTCACACC...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTGGTCGAGAGGCAACGTaGCTTCCACATGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETGREAT*LPHVWE
Trigger: TTCCCACACATGTGGAAGCCACGTTGCCTCTCGACC...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAAACCGCGGGCTGCCATaGATGCCGGGACGGACTGGA +
Preference number: 4 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRNRGLP*MPGRTG
Trigger: TCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTT...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGGACAGTGGGTCTGCTaGAGCCAAGAGTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSGQWVC*SQEWNS
Trigger: GCTGTTCCACTCTTGGCTCCAGCAGACCCACTGTCC...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR TCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAAGAGAAGGCACAGCTaGCTGCCCCTAGCGTATGCC +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVKRRHS*LPLAYA
Trigger: GGCATACGCTAGGGGCAGTCAGCTGTGCCTTCTCTT...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR TCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCTTTTCCGATGCATGGTaGAAAATTATTACTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGFSDAW*KIITAP
Trigger: GGGCGCAGTAATAATTTTTCACCATGCATCGGAAAA...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257829.8
CDS-3UTR TCA 90 bp TTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTATAACACCACAGCACTaGAGGCCGAGCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LSSQTHRPRGRIRGQLPGITPQH*RPSLHS
Trigger: ACTGTGAAGGCTCGGCCTTCAGTGCTGTGGTGTTAT...ACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR TCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGCTGCTGAATTAGCTTaGGGGACAGTGACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWAAELA*GTVTGQ
Trigger: CTGGCCGGTCACTGTCCCTCAAGCTAATTCAGCAGC...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAGCTGCTGAATTAGCTTaGGGGACAGTGACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPAAELA*GTVTGQ
Trigger: CTGGCCGGTCACTGTCCCTCAAGCTAATTCAGCAGC...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTAGGGGCGTATCGGATTaGCTCCTGGAGGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSRGVSD*LLEGNL
Trigger: GAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCT...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGAGGCAGAAGAGATGGTaGGCAGGTGCATCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWRQKRW*AGASES
Trigger: GCTCTCCGATGCACCTGCTCACCATCTCTTCTGCCT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGCTCGTTTCCAGAACTTaGGGAGCCTGGGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWLVSRT*GAWGSS
Trigger: GCTTGACCCCCAGGCTCCTCAAGTTCTGGAAACGAG...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGCCCATGTTCCTGTTCTaGATGATGTTCAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VELTDTQAQRPNSRPASRPMFLF*MMFRAR
Trigger: CCTGGCTCTGAACATCATTCAGAACAGGAACATGGG...CCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGCATCTAGGTCGTCACTaGGGGTCTTCATCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVCRGLSLLLTVQPERVQHLGRH*GSSSWA
Trigger: AGCCCACGATGAAGACCCTCAGTGACGACCTAGATG...CTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGCATCTAGGTCGTCACTaGGGGTCTTCATCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AMYLRASGGREATWLPHVHLGRH*GSSSWA
Trigger: AGCCCACGATGAAGACCCTCAGTGACGACCTAGATG...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTACTGCCCCTAGCGTATaGCTGGTGTCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSTAPSV*LVSGSR
Trigger: ACGTGACCCGGACACCAGGCATACGCTAGGGGCAGT...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR GCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTGTCACTGTGTACAATTaGTTGAGTGAGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASVTVYN*LSEFMV
Trigger: GACCATGAACTCACTCAAGCAATTGTACACAGTGAC...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAACAGGCTGGGTGTCCTaGAAGCTCTCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSTGWVS*KLSFNS
Trigger: GGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGT...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGCCCCTGAAGCCTTCTTaGCTCGAGACAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: PPGHHQKAMYLRASGGREPLKPS*LETDCS
Trigger: TGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGG...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR GCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTAGCATGATGCACGAGTaGTCTCCGGTCAGGTCATTC +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETSMMHE*SPVRSF
Trigger: GAATGACCTGACCGGAGAGCACTCGTGCATCATGCT...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTTTCGCTGCCACCATCTaGTCCTCAATGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETFAATI*SSMAFS
Trigger: GGAAAAGGCCATTGAGGAGCAGATGGTGGCAGCGAA...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCTGGGACAGTGGGTCTaGTGGAGCCAAGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSLGQWV*WSQEWN
Trigger: GTTCCACTCTTGGCTCCAGCAGACCCACTGTCCCAG...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCATCCATGGTGGCAACGTaGGAGGAGATGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPSMVAT*EEMGRM
Trigger: CATCCTGCCCATCTCCTCCCACGTTGCCACCATGGA...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGCAGGGCCTCCATGGTaGCAACGTGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRAGPPW*QRGRRW
Trigger: CCATCTCCTCCCACGTTGCCACCATGGAGGCCCTGC...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGGAGGCAGGGCCTCCATaGTGGCAACGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: THLGVTLPLARLSSQTHREAGPP*WQRGRR
Trigger: TCTCCTCCCACGTTGCCACCATGGAGGCCCTGCCTC...CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGAACACACCCACAGGCTaGGTGTCCTGCAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWNTPTG*VSCKLS
Trigger: GGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTATTTCAAGACAGCTTTaGCCTGGTCTAGAGTCTTAC +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASISRQL*PGLESY
Trigger: GTAAGACTCTAGACCAGGCCAAAGCTGTCTTGAAAT...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAAACCCTGGCGCACCTAACCGCGGGCTGCCATGGATGCCGGGACGGACTGGAGGAGGTTATCAGGGCTTaGGGAGGTAACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: QTLAHLTAGCHGCRDGLEEVIRA*GGNKDI
Trigger: AATATCTTTGTTACCTCCCCAAGCCCTGATAACCTC...CTCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTGCGCCAGGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGCCAAGGGGAGGGGGATaGCGGCAGCTTCATCAATCA +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWPRGGG*RQLHQS
Trigger: TGATTGATGAAGCTGCCGCCATCCCCCTCCCCTTGG...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTACAGGGCAGGCTGGGCTaGCTTCCCCATGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLQGRLG*LPHVPV
Trigger: AACAGGAACATGGGGAAGCCAGCCCAGCCTGCCCTG...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAGGACAGTGGGTCTGCTaGAGCCAAGAGTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPGQWVC*SQEWNS
Trigger: GCTGTTCCACTCTTGGCTCCAGCAGACCCACTGTCC...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR TCA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGCTGCTGAATTAGCTTaGGGGACAGTGACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLAAELA*GTVTGQ
Trigger: CTGGCCGGTCACTGTCCCTCAAGCTAATTCAGCAGC...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAAGGCAGAAGAGATGGTaGGCAGGTGCATCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLRQKRW*AGASES
Trigger: GCTCTCCGATGCACCTGCTCACCATCTCTTCTGCCT...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGACCTCTTCCAACAAGCTaGCAGCCTCGCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRPLPTS*QPRCLR
Trigger: CCGTAAGCAGCGAGGCTGTCAGCTTGTTGGAAGAGG...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp TGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCATCTCGTTTCCAGAACTTaGGGAGCCTGGGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: WAGRERLVAILEMAVPSHLVSRT*GAWGSS
Trigger: GCTTGACCCCCAGGCTCCTCAAGTTCTGGAAACGAG...ATGGCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGTCCACCATATTCCGTaGATACATCTCCAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PPGHHQKAMYLRASGGREVHHIP*IHLQPL
Trigger: AAGCGGCTGGAGATGTATTCACGGAATATGGTGGAC...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGGTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGA +
Preference number: 4 (lower is better)
Translates to: QVELTDTQAQRPNSRPASESIFP*SNTDAR
Trigger: TCGGGCATCTGTGTTTGATCATGGGAAGATACTCTC...GGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAACAGGCTGGGTGTCCTaGAAGCTCTCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMATGWVS*KLSFNS
Trigger: GGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGT...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCACAGGCTGGGTGTCCTaGAAGCTCTCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSTGWVS*KLSFNS
Trigger: GGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGT...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCATCGAGCAGCTGTGAGTaGAACAGTACTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSSSSCE*NSTPQG
Trigger: ACCCTGAGGAGTACTGTTGCACTCACAGCTGCTCGA...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTATTGGAGTACCCAAATaGCACCGCCCCAGCAATCGC +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVIGVPK*HRPSNR
Trigger: GCGATTGCTGGGGCGGTGGCATTTGGGTACTCCAAT...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAAACCCTGGCGCACCTAACCGCGGGCTGCCATGGATGCCGGGACGGACTGGAGCAGCTTCACAGCATCTaGAGGATGTATATACTGAAT +
Preference number: 4 (lower is better)
Translates to: QTLAHLTAGCHGCRDGLEQLHSI*RMYILN
Trigger: ATTCAGTATATACATCCTGCAGATGCTGTGAAGCTG...CTCCAGTCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTGCGCCAGGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR GCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGCCCCTGAAGCCTTCTTaGCTCGAGACAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMPLKPS*LETDCS
Trigger: TGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGG...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGCTGGGTGAACAGCAATaGGAACGACCCTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWLGEQQ*ERPFHQ
Trigger: CTGGTGGAAGGGTCGTTCGCATTGCTGTTCACCCAG...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp TCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCTCCACAGACTTATGCTaGAGGCCAATCCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SWAPPESDVLKGLRRSRGSTDLC*RPIPKR
Trigger: TCTCTTGGGGATTGGCCTGCAGCATAAGTCTGTGGA...GCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTCTGGGACAGTGGGTCTaGTGGAGCCAAGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSLGQWV*WSQEWN
Trigger: GTTCCACTCTTGGCTCCAGCAGACCCACTGTCCCAG...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTAGCGCTGATGCCAATCTaGCTGTCGTCGTGGTCTTAT +
Preference number: 4 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLALMPI*LSSWSY
Trigger: ATAAGACCACGACGACAGCCAGATTGGCATCAGCGC...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGGCGCTGATGCCAATCTaGCTGTCGTCGTGGTCTTAT +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMALMPI*LSSWSY
Trigger: ATAAGACCACGACGACAGCCAGATTGGCATCAGCGC...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGAGGGCCATAAGCCGTTaGAGGAAAACTTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFQVCRGLSLLLTVQPERRAISR*RKTSEA
Trigger: GGCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCT...CCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCACCTTCAAGGCACACCTaGATAACAGCAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: AASFQVCRGLSLLLTVQPPSRHT*ITASTS
Trigger: AGAAGTGCTTGCTGTTATCCAGGTGTGCCTTGAAGG...TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCTGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTACAGACTGTTCAAGATaGACTGGCGAGAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCTDCSR*TGEKSP
Trigger: GGGAGATTTCTCGCCAGTCCATCTTGAACAGTCTGT...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGATCTCCTTTTCCAGCTaGTCCACAGACTTATGCTGC +
Preference number: 4 (lower is better)
Translates to: VELTDTQAQRPNSRPASRISFSS*STDLCC
Trigger: GCAGCATAAGTCTGTGGACCAGCTGGAAAAGGAGAT...CCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGAAAAGTCCCATCAACTaGCCCGAGGGCAGCTCAATC +
Preference number: 4 (lower is better)
Translates to: QVCRGLSLLLTVQPERVQKSPIN*PEGSSI
Trigger: GATTGAGCTGCCCTCGGGCCAGTTGATGGGACTTTT...CTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGGATCAGGCTTTTCTaGGACAGTGGGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMRIRLF*DSGSAG
Trigger: TCCAGCAGACCCACTGTCCCAGAAAAGCCTGATCCT...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAATAACACCACAGCACTaGAGGCCGAGCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPITPQH*RPSLHS
Trigger: ACTGTGAAGGCTCGGCCTTCAGTGCTGTGGTGTTAT...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR TCA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGACCTCTTCCAACAAGCTaGCAGCCTCGCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRPLPTS*QPRCLR
Trigger: CCGTAAGCAGCGAGGCTGTCAGCTTGTTGGAAGAGG...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCACCCATGTTCCTGTTCTaGATGATGTTCAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSPMFLF*MMFRAR
Trigger: CCTGGCTCTGAACATCATTCAGAACAGGAACATGGG...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTTCAATGGCCTTTTCCTaGACTTCATTAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASSMAFS*TSLNSF
Trigger: GAAGCTATTTAATGAAGTTCAGGAAAAGGCCATTGA...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGGTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCGCGAATGTTTGTGGCTaGTATGAAGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QVELTDTQAQRPNSRPASANVCG*YEEFKG
Trigger: CCCTTTGAACTCTTCATAGCAGCCACAAACATTCGC...GGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCTCGAGCAGCTGTGAGTaGAACAGTACTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSSSSCE*NSTPQG
Trigger: ACCCTGAGGAGTACTGTTGCACTCACAGCTGCTCGA...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAATTGGAGTACCCAAATaGCACCGCCCCAGCAATCGC +
Preference number: 4 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLIGVPK*HRPSNR
Trigger: GCGATTGCTGGGGCGGTGGCATTTGGGTACTCCAAT...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGCCATTGATGGTGGATaGCATGAAAACAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QPPGHHQKAMYLRASGGRAIDGG*HENKVG
Trigger: CCCTACCTTGTTTTCATGGCATCCACCATCAATGGC...TCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGATGGTGAGCAGGTaGATCGGAGAGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSEMVSR*IGEHLE
Trigger: CTCCAGATGCTCTCCGATGCACCTGCTCACCATCTC...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGAGCATGATGCACGAGTaGTCTCCGGTCAGGTCATTC +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWSMMHE*SPVRSF
Trigger: GAATGACCTGACCGGAGAGCACTCGTGCATCATGCT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTCCACAGACTTATGCTaGAGGCCAATCCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: QVCRGLSLLLTVQPERVQSTDLC*RPIPKR
Trigger: TCTCTTGGGGATTGGCCTGCAGCATAAGTCTGTGGA...CTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGTGGTCCACAGACTTATaGTGCAGGCCAATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWWSTDL*CRPIPK
Trigger: CTTGGGGATTGGCCTGCAGCATAAGTCTGTGGACCA...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCATTCGCTGCCACCATCTaGTCCTCAATGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPFAATI*SSMAFS
Trigger: GGAAAAGGCCATTGAGGAGCAGATGGTGGCAGCGAA...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGACCACATCCTTCGCTaGCACCATCTGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSDHILR*HHLLLN
Trigger: ATTGAGGAGCAGATGGTGGCAGCGAAGGATGTGGTC...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGACCACATCCTTCGCTaGCACCATCTGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWDHILR*HHLLLN
Trigger: ATTGAGGAGCAGATGGTGGCAGCGAAGGATGTGGTC...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGACTGGAGTTCCTCCTaGTCCAGGTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMADWSSS*SRYKST
Trigger: TGTGGACTTGTACCTGGAGCAGGAGGAACTCCAGTC...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR GCA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCCACCTAACCGCGGGCTaGCATGGATGCCGGGACGGA +
Preference number: 4 (lower is better)
Translates to: SSSKETHLGVTLPLARLSHLTAG*HGCRDG
Trigger: TCCGTCCCGGCATCCATGGCAGCCCGCGGTTAGGTG...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGACCCCTAGCGTATGCCTaGTGTCCGGGTCACGTAGTA +
Preference number: 4 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRPLAYA*CPGHVV
Trigger: TACTACGTGACCCGGACACCAGGCATACGCTAGGGG...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CCA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCCTTCACAGTTGCTTTaGATAACATGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGPSQLL*ITCDEV
Trigger: TACTTCATCACATGTTATCCAAAGCAACTGTGAAGG...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR CCA 90 bp AGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTGGGCGCAGGGCCTCCATGGTaGCAACGTGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SWLKAKYELIGKEGPGLGAGPPW*QRGRRW
Trigger: CCATCTCCTCCCACGTTGCCACCATGGAGGCCCTGC...GCCCAGTCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGGCATCGGAGAGCATCTaGAGATCATTGGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMASESI*RSLGEF
Trigger: GAACTCTCCCAATGATCTCCAGATGCTCTCCGATGC...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTCCTTCAAGGCACACCTaGATAACAGCAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETPSRHT*ITASTS
Trigger: AGAAGTGCTTGCTGTTATCCAGGTGTGCCTTGAAGG...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGGTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCCATCCCTTGATAATCTaGGTGAACAGCAATGCGAAC +
Preference number: 4 (lower is better)
Translates to: QVELTDTQAQRPNSRPASHPLII*VNSNAN
Trigger: GTTCGCATTGCTGTTCACCCAGATTATCAAGGGATG...GGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTACGGCTCAGGGCAGGCTaGGCTGGCTTCCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLRLRAG*AGFPMF
Trigger: GAACATGGGGAAGCCAGCCCAGCCTGCCCTGAGCCG...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAAGGATCAGGCTTTTCTaGGACAGTGGGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPRIRLF*DSGSAG
Trigger: TCCAGCAGACCCACTGTCCCAGAAAAGCCTGATCCT...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp TCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCGGTTCTTGTTTGGCCTaGTCTAGAGTCTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: SWAPPESDVLKGLRRSRGGSCLA*SRVLQQ
Trigger: CTGCTGTAAGACTCTAGACCAGGCCAAACAAGAACC...GCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527971.5
CDS-3UTR TCA 90 bp CAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTGTTTGTGGCTGCTATaGAGAGTTCAAAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: QVCRGLSLLLTVQPERVQCLWLL*RVQRGR
Trigger: ACGACCCCTTTGAACTCTTCATAGCAGCCACAAACA...CTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCATCGCTGCTTACGGTGTaGATTTCCTGTGGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMASLLTV*ISCGVS
Trigger: TGAGACACCACAGGAAATTCACACCGTAAGCAGCGA...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTCCACCATATTCCGTaGATACATCTCCAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMAVHHIP*IHLQPL
Trigger: AAGCGGCTGGAGATGTATTCACGGAATATGGTGGAC...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp TCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCACAAAGAGAGATCTTTaGCGCTCAGCTACTCCATTC +
Preference number: 4 (lower is better)
Translates to: SWAPPESDVLKGLRRSRGTKRDL*RSATPF
Trigger: GAATGGAGTAGCTGAGCGGCAAAGATCTCTCTTTGT...GCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR GCA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTTTCTTTATTTTCTTCTaGAGCTGTCGCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TQAQRPNSRPASRCAGASFFIFF*SCRILF
Trigger: GAAAAGAATGCGACAGCTGCAGAAGAAAATAAAGAA...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCACATGCCGAAGGTATTaGCCAGGATCTTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSTCRRY*PGSCGS
Trigger: AGACCCACAAGATCCTGGGCAATACCTTCGGCATGT...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAAGGCTTCAAAATCCTaGAGCACACACATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMKASKS*STHMPK
Trigger: CTTCGGCATGTGTGTGCTGCAGGATTTTGAAGCCTT...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp AGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTGGGCCGCCAATCCCAGGGCTaGAGATTTTCCCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SWLKAKYELIGKEGPGLGRQSQG*RFSPSS
Trigger: CGAGGACGGGGAAAATCTGCAGCCCTGGGATTGGCG...GCCCAGTCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTACGCCAATCCCAGGGCTaGAGATTTTCCCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVRQSQG*RFSPSS
Trigger: CGAGGACGGGGAAAATCTGCAGCCCTGGGATTGGCG...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGGAGATGGTGAGCAGGTaGATCGGAGAGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: THLGVTLPLARLSSQTHREMVSR*IGEHLE
Trigger: CTCCAGATGCTCTCCGATGCACCTGCTCACCATCTC...CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTCCCCTGAAGCCTTCTTaGCTCGAGACAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSPLKPS*LETDCS
Trigger: TGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGG...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACAGCTGCAGAGCACGGCTaGCATAGCCCATCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTAAEHG*HSPSLD
Trigger: ATCAAGGGATGGGCTATGGCAGCCGTGCTCTGCAGC...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTGGTTCAGGAAATAGATaGGAGAGATGGCCGGGATCA +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVGSGNR*ERWPGS
Trigger: TGATCCCGGCCATCTCTCGCATCTATTTCCTGAACC...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACATCCATGGTGGCAACGTaGGAGGAGATGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTSMVAT*EEMGRM
Trigger: CATCCTGCCCATCTCCTCCCACGTTGCCACCATGGA...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGAGGCAGGGCCTCCATaGTGGCAACGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLEAGPP*WQRGRR
Trigger: TCTCCTCCCACGTTGCCACCATGGAGGCCCTGCCTC...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAAAGACAGCTTTGGCCTaGTCTAGAGTCTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSKTALA*SRVLQQ
Trigger: CTGCTGTAAGACTCTAGACCAGGCCAAAGCTGTCTT...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGACAACTAGTTCAGCCTaGCCCAGCTTCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWTTSSA*PSFTAS
Trigger: AGATGCTGTGAAGCTGGGCCAGGCTGAACTAGTTGT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGAGCGCTGATGCCAATCTaGCTGTCGTCGTGGTCTTAT +
Preference number: 4 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRALMPI*LSSWSY
Trigger: ATAAGACCACGACGACAGCCAGATTGGCATCAGCGC...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGAAGGGCCATAAGCCGTTaGAGGAAAACTTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRRAISR*RKTSEA
Trigger: GGCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCT...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTGCATCGGAGAGCATCTaGAGATCATTGGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVASESI*RSLGEF
Trigger: GAACTCTCCCAATGATCTCCAGATGCTCTCCGATGC...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp TGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCATAACAGCAAGCACTTCTaGAAGGGCATTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WAGRERLVAILEMAVPSHNSKHF*KGILGG
Trigger: CCCACCCAGAATGCCCTTCCAGAAGTGCTTGCTGTT...ATGGCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTGGTGTGAATTTCCTGTaGTGTCTCAAGGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: GPQAVERQRGFHMCGNETGVNFL*CLKDLF
Trigger: GAAAAGGTCCTTGAGACACCACAGGAAATTCACACC...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp AGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTGGGCTGGTCCGTAGGAGGATaGCCACTAGCCCACCACCTT +
Preference number: 4 (lower is better)
Translates to: SWLKAKYELIGKEGPGLGWSVGG*PLAHHL
Trigger: AAGGTGGTGGGCTAGTGGTCATCCTCCTACGGACCA...GCCCAGTCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTACTGTGTACAATTGCTTaGGTGAGTTCATGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLLCTIA*VSSWSV
Trigger: TACGGACCATGAACTCACTCAAGCAATTGTACACAG...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCACTGTGTACAATTGCTTaGGTGAGTTCATGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSLCTIA*VSSWSV
Trigger: TACGGACCATGAACTCACTCAAGCAATTGTACACAG...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCGCCTCTCATTCAATTTaGGGAGTAAAGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSASHSI*GVKEAG
Trigger: ACCTGCCTCCTTTACTCCTCAAATTGAATGAGAGGC...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTGCCTCTCATTCAATTTaGGGAGTAAAGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVASHSI*GVKEAG
Trigger: ACCTGCCTCCTTTACTCCTCAAATTGAATGAGAGGC...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTATCAAAGGGGTCGTCCTaGTTTATGTTCAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLSKGSS*FMFSVP
Trigger: TGGAACACTGAACATAAAGCAGGACGACCCCTTTGA...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACCTGCAGCACACACATaGCGAAGGTATTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTPAAHT*RRYCPG
Trigger: TCCTGGGCAATACCTTCGGCATGTGTGTGCTGCAGG...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGGTTCTGTACCTGGAATaGACATCCATAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: AMYLRASGGREATWLPHVVLYLE*TSIVTV
Trigger: CACAGTGACTATGGATGTGCATTCCAGGTACAGAAC...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACTGGGTGAACAGCAATaGGAACGACCCTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTLGEQQ*ERPFHQ
Trigger: CTGGTGGAAGGGTCGTTCGCATTGCTGTTCACCCAG...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGCCAGACAAGGAAACCTaGCTTCATAGTACATCTGCA +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMPDKET*LHSTSA
Trigger: TGCAGATGTACTATGAAGGCAGGTTTCCTTGTCTGG...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGATTCAGAGAGGTCCATaGTCTTCAGCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: SFQVCRGLSLLLTVQPERIQRGP*SSASLL
Trigger: AAGTAGGGAAGCTGAAGAGCATGGACCTCTCTGAAT...CCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGACTGGAGTTCCTCCTaGTCCAGGTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRDWSSS*SRYKST
Trigger: TGTGGACTTGTACCTGGAGCAGGAGGAACTCCAGTC...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp TTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGAGGTTATCAGGGCTTaGGGAGGTAACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: LSSQTHRPRGRIRGQLPGEVIRA*GGNKDI
Trigger: AATATCTTTGTTACCTCCCCAAGCCCTGATAACCTC...ACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAACAACTAGTTCAGCCTaGCCCAGCTTCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLTTSSA*PSFTAS
Trigger: AGATGCTGTGAAGCTGGGCCAGGCTGAACTAGTTGT...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp TGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCATATCTGGCTGTCGTCGTaGTCTTATTCTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: WAGRERLVAILEMAVPSHIWLSS*SYSQQW
Trigger: CCACTGCTGAGAATAAGACCACGACGACAGCCAGAT...ATGGCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGGCATCTGGAGATCATTaGGAGAGTTCTTGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMASGDH*ESSCSE
Trigger: CTCACTACAAGAACTCTCCCAATGATCTCCAGATGC...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGACAGACTGTTCAAGATaGACTGGCGAGAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWTDCSR*TGEKSP
Trigger: GGGAGATTTCTCGCCAGTCCATCTTGAACAGTCTGT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGGGTGTGAATTTCCTGTaGTGTCTCAAGGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMGVNFL*CLKDLF
Trigger: GAAAAGGTCCTTGAGACACCACAGGAAATTCACACC...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCCAGGGCAGGCTGGGCTaGCTTCCCCATGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPQGRLG*LPHVPV
Trigger: AACAGGAACATGGGGAAGCCAGCCCAGCCTGCCCTG...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAATCTCCTTTTCCAGCTaGTCCACAGACTTATGCTGC +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMAISFSS*STDLCC
Trigger: GCAGCATAAGTCTGTGGACCAGCTGGAAAAGGAGAT...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
3UTR CAA 72 bp GGCAGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTaGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSAQPSSSKETH*GVTLPLARLSS
Trigger: TGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTTGTTTGTGGCTGCTATaGAGAGTTCAAAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSCLWLL*RVQRGR
Trigger: ACGACCCCTTTGAACTCTTCATAGCAGCCACAAACA...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGCTGTGTACAATTGCTTaGGTGAGTTCATGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWLCTIA*VSSWSV
Trigger: TACGGACCATGAACTCACTCAAGCAATTGTACACAG...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGGCAGGATGTATATACTaGATAGTCTGCCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMAGCIY*IVCLCS
Trigger: AGAACACAGGCAGACTATTCAGTATATACATCCTGC...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCAGGGGCGTATCGGATTaGCTCCTGGAGGGAAACCTC +
Preference number: 4 (lower is better)
Translates to: SSSKETHLGVTLPLARLSRGVSD*LLEGNL
Trigger: GAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCT...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCTCAAAGGGGTCGTCCTaGTTTATGTTCAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSSKGSS*FMFSVP
Trigger: TGGAACACTGAACATAAAGCAGGACGACCCCTTTGA...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGCGAATGTTTGTGGCTaGTATGAAGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMAANVCG*YEEFKG
Trigger: CCCTTTGAACTCTTCATAGCAGCCACAAACATTCGC...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp ACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGACATGCCGAAGGTATTaGCCAGGATCTTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: THLGVTLPLARLSSQTHRTCRRY*PGSCGS
Trigger: AGACCCACAAGATCCTGGGCAATACCTTCGGCATGT...CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp AGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTCACTGTGTACAATTaGTTGAGTGAGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: SFQVCRGLSLLLTVQPERVTVYN*LSEFMV
Trigger: GACCATGAACTCACTCAAGCAATTGTACACAGTGAC...CCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAGTTCTGTACCTGGAATaGACATCCATAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPVLYLE*TSIVTV
Trigger: CACAGTGACTATGGATGTGCATTCCAGGTACAGAAC...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAATTCAGAGAGGTCCATaGTCTTCAGCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPIQRGP*SSASLL
Trigger: AAGTAGGGAAGCTGAAGAGCATGGACCTCTCTGAAT...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGCCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAATGATCAAACACAGATaGCCGAGTTTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: QPPGHHQKAMYLRASGGRMIKHR*PSFSSL
Trigger: TAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCAT...TCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTAAGACAGCTTTGGCCTaGTCTAGAGTCTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSKTALA*SRVLQQ
Trigger: CTGCTGTAAGACTCTAGACCAGGCCAAAGCTGTCTT...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGATTTCAAGACAGCTTTaGCCTGGTCTAGAGTCTTAC +
Preference number: 4 (lower is better)
Translates to: SFQVCRGLSLLLTVQPERISRQL*PGLESY
Trigger: GTAAGACTCTAGACCAGGCCAAAGCTGTCTTGAAAT...CCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTACCAAGGGGAGGGGGATaGCGGCAGCTTCATCAATCA +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLPRGGG*RQLHQS
Trigger: TGATTGATGAAGCTGCCGCCATCCCCCTCCCCTTGG...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCTATCGGATTGACTCCTaGAGGGAAACCTCATACAGT +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSYRIDS*RETSYS
Trigger: ACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATA...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTTATCGGATTGACTCCTaGAGGGAAACCTCATACAGT +
Preference number: 4 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVYRIDS*RETSYS
Trigger: ACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATA...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGCATCTGGAGATCATTaGGAGAGTTCTTGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: MYLRASGGREATWLPHVWASGDH*ESSCSE
Trigger: CTCACTACAAGAACTCTCCCAATGATCTCCAGATGC...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAGCATCTGGAGATCATTaGGAGAGTTCTTGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPASGDH*ESSCSE
Trigger: CTCACTACAAGAACTCTCCCAATGATCTCCAGATGC...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCCAAAGTCTGGATCTTaGAACTGTTCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSPKSGS*NCSDTV
Trigger: GACAGTGTCAGAACAGTTCCAAGATCCAGACTTTGG...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATCCCTTGATAATCTaGGTGAACAGCAATGCGAAC +
Preference number: 4 (lower is better)
Translates to: QKAMYLRASGGREATWLPHPLII*VNSNAN
Trigger: GTTCGCATTGCTGTTCACCCAGATTATCAAGGGATG...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCACATCCCTTGATAATCTaGGTGAACAGCAATGCGAAC +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMAHPLII*VNSNAN
Trigger: GTTCGCATTGCTGTTCACCCAGATTATCAAGGGATG...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCACCATCTGCTCCTCAATaGCCTTTTCCTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RALDWAGRERLVAILEMAPSAPQ*PFPELH
Trigger: ATGAAGTTCAGGAAAAGGCCATTGAGGAGCAGATGG...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTAGGTCGAGAGGCAACGTaGCTTCCACATGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVGREAT*LPHVWE
Trigger: TTCCCACACATGTGGAAGCCACGTTGCCTCTCGACC...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCTACTCCATTCTCAATaGGAATCCGGATTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSLLHSQ*ESGFGY
Trigger: ATAACCGAATCCGGATTCTCATTGAGAATGGAGTAG...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR TCA 90 bp TGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCATATCTTGGAACTGTTCTaGCACTGTCCATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: WAGRERLVAILEMAVPSHILELF*HCPWNQ
Trigger: CTGATTCCATGGACAGTGTCAGAACAGTTCCAAGAT...ATGGCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp ACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGGCCTCTCATTCAATTTaGGGAGTAAAGGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: THLGVTLPLARLSSQTHRASHSI*GVKEAG
Trigger: ACCTGCCTCCTTTACTCCTCAAATTGAATGAGAGGC...CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCCATCTAGGTCGTCACTaGGGGTCTTCATCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSSKETHLGVTLPLARLSHLGRH*GSSSWA
Trigger: AGCCCACGATGAAGACCCTCAGTGACGACCTAGATG...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGCGAATGTTTGTGGCTaGTATGAAGAGTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSANVCG*YEEFKG
Trigger: CCCTTTGAACTCTTCATAGCAGCCACAAACATTCGC...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCACAGGCTGGGTGTCCTaGAAGCTCTCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPTGWVS*KLSFNS
Trigger: GGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGT...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCATTGGAGTACCCAAATaGCACCGCCCCAGCAATCGC +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPIGVPK*HRPSNR
Trigger: GCGATTGCTGGGGCGGTGGCATTTGGGTACTCCAAT...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGCCATTGATGGTGGATaGCATGAAAACAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRAIDGG*HENKVG
Trigger: CCCTACCTTGTTTTCATGGCATCCACCATCAATGGC...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACAATCTGGCTGTCGTCGTaGTCTTATTCTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTIWLSS*SYSQQW
Trigger: CCACTGCTGAGAATAAGACCACGACGACAGCCAGAT...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTAAGGGCCATAAGCCGTTaGAGGAAAACTTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVRAISR*RKTSEA
Trigger: GGCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCT...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACAGCATCGGAGAGCATCTaGAGATCATTGGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTASESI*RSLGEF
Trigger: GAACTCTCCCAATGATCTCCAGATGCTCTCCGATGC...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTCCAAAGTCTGGATCTTaGAACTGTTCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSPKSGS*NCSDTV
Trigger: GACAGTGTCAGAACAGTTCCAAGATCCAGACTTTGG...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGGTCGAGAGGCAACGTaGCTTCCACATGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPGREAT*LPHVWE
Trigger: TTCCCACACATGTGGAAGCCACGTTGCCTCTCGACC...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGTCAATGGCCTTTTCCTaGACTTCATTAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMSMAFS*TSLNSF
Trigger: GAAGCTATTTAATGAAGTTCAGGAAAAGGCCATTGA...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp TCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCTCCACCTTTTTCCGATaGATGGTGAAAAATTATTAC +
Preference number: 4 (lower is better)
Translates to: SWAPPESDVLKGLRRSRGSTFFR*MVKNYY
Trigger: GTAATAATTTTTCACCATGCATCGGAAAAAGGTGGA...GCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR GCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACAAAGGCTTCAAAATCCTaGAGCACACACATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTKASKS*STHMPK
Trigger: CTTCGGCATGTGTGTGCTGCAGGATTTTGAAGCCTT...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCCCCCTAGCGTATGCCTaGTGTCCGGGTCACGTAGTA +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFPLAYA*CPGHVV
Trigger: TACTACGTGACCCGGACACCAGGCATACGCTAGGGG...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACAAAGACAGCTTTGGCCTaGTCTAGAGTCTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTKTALA*SRVLQQ
Trigger: CTGCTGTAAGACTCTAGACCAGGCCAAAGCTGTCTT...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCAACAGCAAGCACTTCTaGAAGGGCATTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPNSKHF*KGILGG
Trigger: CCCACCCAGAATGCCCTTCCAGAAGTGCTTGCTGTT...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCAGGATCAGGCTTTTCTaGGACAGTGGGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPRIRLF*DSGSAG
Trigger: TCCAGCAGACCCACTGTCCCAGAAAAGCCTGATCCT...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR TCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGAAAGAGAAGGCACAGCTaGCTGCCCCTAGCGTATGCC +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGKRRHS*LPLAYA
Trigger: GGCATACGCTAGGGGCAGTCAGCTGTGCCTTCTCTT...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR TCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGATGGTCCGTAGGAGGATaGCCACTAGCCCACCACCTT +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGWSVGG*PLAHHL
Trigger: AAGGTGGTGGGCTAGTGGTCATCCTCCTACGGACCA...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR TCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCTCGCTGCTTACGGTGTaGATTTCCTGTGGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPSLLTV*ISCGVS
Trigger: TGAGACACCACAGGAAATTCACACCGTAAGCAGCGA...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCTCAATGGCCTTTTCCTaGACTTCATTAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSSMAFS*TSLNSF
Trigger: GAAGCTATTTAATGAAGTTCAGGAAAAGGCCATTGA...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACATCAAAGGGGTCGTCCTaGTTTATGTTCAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTSKGSS*FMFSVP
Trigger: TGGAACACTGAACATAAAGCAGGACGACCCCTTTGA...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTAAAGGCTTCAAAATCCTaGAGCACACACATGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVKASKS*STHMPK
Trigger: CTTCGGCATGTGTGTGCTGCAGGATTTTGAAGCCTT...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCCTGGGTGAACAGCAATaGGAACGACCCTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFLGEQQ*ERPFHQ
Trigger: CTGGTGGAAGGGTCGTTCGCATTGCTGTTCACCCAG...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGGTTCAGGAAATAGATaGGAGAGATGGCCGGGATCA +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPGSGNR*ERWPGS
Trigger: TGATCCCGGCCATCTCTCGCATCTATTTCCTGAACC...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTATGATCAAACACAGATaGCCGAGTTTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSMIKHR*PSFSSL
Trigger: TAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCAT...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACCAAGGGGAGGGGGATaGCGGCAGCTTCATCAATCA +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGPRGGG*RQLHQS
Trigger: TGATTGATGAAGCTGCCGCCATCCCCCTCCCCTTGG...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTGTTTGTGGCTGCTATaGAGAGTTCAAAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: SSSKETHLGVTLPLARLSCLWLL*RVQRGR
Trigger: ACGACCCCTTTGAACTCTTCATAGCAGCCACAAACA...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCTTCTTTATTTTCTTCTaGAGCTGTCGCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: DWAGRERLVAILEMAVPSFFIFF*SCRILF
Trigger: GAAAAGAATGCGACAGCTGCAGAAGAAAATAAAGAA...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCATTGATGGTGGATaGCATGAAAACAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLAIDGG*HENKVG
Trigger: CCCTACCTTGTTTTCATGGCATCCACCATCAATGGC...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCGACTGGAGTTCCTCCTaGTCCAGGTACAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFDWSSS*SRYKST
Trigger: TGTGGACTTGTACCTGGAGCAGGAGGAACTCCAGTC...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCAACAGCAAGCACTTCTaGAAGGGCATTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFNSKHF*KGILGG
Trigger: CCCACCCAGAATGCCCTTCCAGAAGTGCTTGCTGTT...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTACTGTTCAAGATGGACTaGCGAGAAATCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLLFKMD*REISPS
Trigger: TGAAGGGGAGATTTCTCGCCAGTCCATCTTGAACAG...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCAGGGCAGGCTGGGCTaGCTTCCCCATGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGQGRLG*LPHVPV
Trigger: AACAGGAACATGGGGAAGCCAGCCCAGCCTGCCCTG...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTGGGCCCATCTGCTCCTCAATaGCCTTTTCCTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: SWLKAKYELIGKEGPGLGPSAPQ*PFPELH
Trigger: ATGAAGTTCAGGAAAAGGCCATTGAGGAGCAGATGG...GCCCAGTCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAATCTTGGAACTGTTCTaGCACTGTCCATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLILELF*HCPWNQ
Trigger: CTGATTCCATGGACAGTGTCAGAACAGTTCCAAGAT...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCGTTCTGTACCTGGAATaGACATCCATAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: SSSKETHLGVTLPLARLSVLYLE*TSIVTV
Trigger: CACAGTGACTATGGATGTGCATTCCAGGTACAGAAC...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCCCAGACAAGGAAACCTaGCTTCATAGTACATCTGCA +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPPDKET*LHSTSA
Trigger: TGCAGATGTACTATGAAGGCAGGTTTCCTTGTCTGG...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCATTCAGAGAGGTCCATaGTCTTCAGCTTCCCTACTT +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPIQRGP*SSASLL
Trigger: AAGTAGGGAAGCTGAAGAGCATGGACCTCTCTGAAT...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCTTCACAGTTGCTTTaGATAACATGTGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: THLGVTLPLARLSSQTHRPSQLL*ITCDEV
Trigger: TACTTCATCACATGTTATCCAAAGCAACTGTGAAGG...CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR CCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCACAACTAGTTCAGCCTaGCCCAGCTTCACAGCATCT +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFTTSSA*PSFTAS
Trigger: AGATGCTGTGAAGCTGGGCCAGGCTGAACTAGTTGT...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp GTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCACTATTTCTTCCTCGCTGCTTACGGTGTaGATTTCCTGTGGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSSHDQTQMPEFLFTISSSLLTV*ISCGVS
Trigger: TGAGACACCACAGGAAATTCACACCGTAAGCAGCGA...GGAAGAAATAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615292.1
CDS-3UTR GCA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGTCACTGTGTACAATTaGTTGAGTGAGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPVTVYN*LSEFMV
Trigger: GACCATGAACTCACTCAAGCAATTGTACACAGTGAC...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR GCA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTACAGCTTCACAGCATCTaGAGGATGTATATACTGAAT +
Preference number: 4 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVQLHSI*RMYILN
Trigger: ATTCAGTATATACATCCTGCAGATGCTGTGAAGCTG...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTAATGATCAAACACAGATaGCCGAGTTTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVMIKHR*PSFSSL
Trigger: TAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCAT...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTGGGCATGATCAAACACAGATaGCCGAGTTTCTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: SWLKAKYELIGKEGPGLGMIKHR*PSFSSL
Trigger: TAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCAT...GCCCAGTCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAATTTCAAGACAGCTTTaGCCTGGTCTAGAGTCTTAC +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLISRQL*PGLESY
Trigger: GTAAGACTCTAGACCAGGCCAAAGCTGTCTTGAAAT...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCTCGAGCAGCTGTGAGTaGAACAGTACTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGSSSCE*NSTPQG
Trigger: ACCCTGAGGAGTACTGTTGCACTCACAGCTGCTCGA...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCTGGTCCACAGACTTATaGTGCAGGCCAATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGWSTDL*CRPIPK
Trigger: CTTGGGGATTGGCCTGCAGCATAAGTCTGTGGACCA...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTGTTCAAGATGGACTaGCGAGAAATCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGLFKMD*REISPS
Trigger: TGAAGGGGAGATTTCTCGCCAGTCCATCTTGAACAG...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGAATCTCCTTTTCCAGCTaGTCCACAGACTTATGCTGC +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGISFSS*STDLCC
Trigger: GCAGCATAAGTCTGTGGACCAGCTGGAAAAGGAGAT...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCAAAAGTCCCATCAACTaGCCCGAGGGCAGCTCAATC +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGKSPIN*PEGSSI
Trigger: GATTGAGCTGCCCTCGGGCCAGTTGATGGGACTTTT...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCGCAGGATGTATATACTaGATAGTCTGCCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFAGCIY*IVCLCS
Trigger: AGAACACAGGCAGACTATTCAGTATATACATCCTGC...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp AGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCACTATTTCTGAGAGTATCTTCCCATaGTCAAACACAGATGCCCGA +
Preference number: 4 (lower is better)
Translates to: RVSSHDQTQMPEFLFTISESIFP*SNTDAR
Trigger: TCGGGCATCTGTGTTTGATCATGGGAAGATACTCTC...AGAAATAGTGAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615292.1
CDS-3UTR GCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGAGTTCTGTACCTGGAATaGACATCCATAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGVLYLE*TSIVTV
Trigger: CACAGTGACTATGGATGTGCATTCCAGGTACAGAAC...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp CAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGAGTTTCTCTTCGAGGTTATCAGGGCTTaGGGAGGTAACAAAGATATT +
Preference number: 4 (lower is better)
Translates to: QLVRVSSHDQTQMPEFLFEVIRA*GGNKDI
Trigger: AATATCTTTGTTACCTCCCCAAGCCCTGATAACCTC...GAAGAGAAACTCGGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR TCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACTACTCCATTCTCAATaGGAATCCGGATTCGGTTAT +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGLLHSQ*ESGFGY
Trigger: ATAACCGAATCCGGATTCTCATTGAGAATGGAGTAG...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR TCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGAGCAGGATGTATATACTaGATAGTCTGCCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGAGCIY*IVCLCS
Trigger: AGAACACAGGCAGACTATTCAGTATATACATCCTGC...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp AGTGCCCAGCCATCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTATTCTTTATTTTCTTCTaGAGCTGTCGCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SAQPSSSKETHLGVTLPLFFIFF*SCRILF
Trigger: GAAAAGAATGCGACAGCTGCAGAAGAAAATAAAGAA...TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGATGGCTGGGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCTGTTCAAGATGGACTaGCGAGAAATCTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGLFKMD*REISPS
Trigger: TGAAGGGGAGATTTCTCGCCAGTCCATCTTGAACAG...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp TCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCTCCACCTTTTTCCGATaGATGGTGAAAAATTATTAC +
Preference number: 4 (lower is better)
Translates to: SLLLTVQPERVQLVRVSSSTFFR*MVKNYY
Trigger: GTAATAATTTTTCACCATGCATCGGAAAAAGGTGGA...GGAAGATACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR GCA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGACAGCTTCACAGCATCTaGAGGATGTATATACTGAAT +
Preference number: 4 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGQLHSI*RMYILN
Trigger: ATTCAGTATATACATCCTGCAGATGCTGTGAAGCTG...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR GCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCAGACAAGGAAACCTaGCTTCATAGTACATCTGCA +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGPDKET*LHSTSA
Trigger: TGCAGATGTACTATGAAGGCAGGTTTCCTTGTCTGG...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCTATCGGATTGACTCCTaGAGGGAAACCTCATACAGT +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGYRIDS*RETSYS
Trigger: ACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATA...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CCA 90 bp ATGAGACTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCAAAGTCTGGATCTTaGAACTGTTCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: MRLKSWLKAKYELIGKEGPKSGS*NCSDTV
Trigger: GACAGTGTCAGAACAGTTCCAAGATCCAGACTTTGG...GCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAGTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCGCTCGTTTCCAGAACTaGAGGAGCCTGGGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: HTGPEAEFAASFQVCRGLARFQN*RSLGVK
Trigger: CTTGACCCCCAGGCTCCTCAAGTTCTGGAAACGAGC...GAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCCTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 5 (lower is better)
Translates to: HTGPEAEFAASFQVCRGLLPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...GAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp GGAACAACTCCGAAAGAGAAGGCACAGCTGACTGCCCCTAGCGTATaGCTGGTGTCCGGGTCACGTAGTAAGCCTGGCTCCGCGGCACGC +
Preference number: 5 (lower is better)
Translates to: GTTPKEKAQLTAPSV*LVSGSRSKPGSAAR
Trigger: GCGTGCCGCGGAGCCAGGCTTACTACGTGACCCGGACACCAGGCATACGCTAGGGGCAGTCAGCTGTGCCTTCTCTTTCGGAGTTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000532503.5
CDS-3UTR CAA 90 bp CAGGTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCGCTCGTTTCCAGAACTaGAGGAGCCTGGGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: QVELTDTQAQRPNSRPASARFQN*RSLGVK
Trigger: CTTGACCCCCAGGCTCCTCAAGTTCTGGAAACGAGC...GGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCTTGCGGATGATCCGGTaGAAAAGTCCCATCAACTGG +
Preference number: 5 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGLRMIR*KSPINW
Trigger: CCAGTTGATGGGACTTTTCAACCGGATCATCCGCAA...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp CTCTCATCCGGAGTCTGGGGAGGCAGGGCCTCCATGGTGGCAACGTaGGAGGAGATGGGCAGGATGTTGAGCTGGTCATCAATGACGAGA +
Preference number: 5 (lower is better)
Translates to: LSSGVWGGRASMVAT*EEMGRMLSWSSMTR
Trigger: TCTCGTCATTGATGACCAGCTCAACATCCTGCCCATCTCCTCCCACGTTGCCACCATGGAGGCCCTGCCTCCCCAGACTCCGGATGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTCAGGGGCGTATCGGATaGACTCCTGGAGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: LSSQTHRPRGRIRGQLPGQGRIG*TPGGKP
Trigger: AGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTG...ACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTCAGGGGCGTATCGGATaGACTCCTGGAGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: GPQAVERQRGFHMCGNETQGRIG*TPGGKP
Trigger: AGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTG...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTTGCCGGGGCCTCTCGTaGCTTTTAACAGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LSSQTHRPRGRIRGQLPGCRGLS*LLTVQP
Trigger: TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCA...ACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCACTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 5 (lower is better)
Translates to: AASFQVCRGLSLLLTVQPLPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCTGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS TCA 90 bp GAAGCACGTGGGAGCACGGAACAACTCCGAAAGAGAAGGCACAGCTaGCTGCCCCTAGCGTATGCCTGGTGTCCGGGTCACGTAGTAAGC +
Preference number: 5 (lower is better)
Translates to: EARGSTEQLRKRRHS*LPLAYAWCPGHVVS
Trigger: GCTTACTACGTGACCCGGACACCAGGCATACGCTAGGGGCAGTCAGCTGTGCCTTCTCTTTCGGAGTTGTTCCGTGCTCCCACGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000532503.5
CDS GCA 90 bp CTGTCCTGCAATCTCCTCAAAAGTGTCACAGACACAGAGAAGAGCTaGTGGCTCTTCTGGGCCTGCCTCTTGCTCGGGACGTGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSCNLLKSVTDTEKS*WLFWACLLLGTCGR
Trigger: CCTCCCGCACGTCCCGAGCAAGAGGCAGGCCCAGAAGAGCCAGCAGCTCTTCTCTGTGTCTGTGACACTTTTGAGGAGATTGCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS-3UTR CAA 90 bp CAGGTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCACTATCCGAGTGATGTaGAGGCAATCCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: QVELTDTQAQRPNSRPASTIRVM*RQSRHS
Trigger: GCTGTGCCTGGATTGCCTCAACATCACTCGGATAGT...GGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTACTATCCGAGTGATGTaGAGGCAATCCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCTIRVM*RQSRHS
Trigger: GCTGTGCCTGGATTGCCTCAACATCACTCGGATAGT...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCGAGGGCCATAAGCCGTaGGAGGAAAACTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SWAPPESDVLKGLRRSRGEGHKP*EENFRG
Trigger: GCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCTC...GCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGAGGGCCATAAGCCGTaGGAGGAAAACTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PPGHHQKAMYLRASGGREEGHKP*EENFRG
Trigger: GCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCTC...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTTCTCCTGAAATTCCTTaGCTGCTTCATCTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: TQAQRPNSRPASRCAGASSPEIP*LLHLGR
Trigger: ACGACCTAGATGAAGCAGCAAAGGAATTTCAGGAGA...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp ACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTTCTAAAGAGACCCATTaGGGAGTGACTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: TQAQRPNSRPASRCAGASSKETH*GVTLPL
Trigger: TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGA...AGAGGCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp AGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGCTGTTTGGGTTCTTGTTaGGCCTGGTCTAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: RHTGPEAEFAASFQVCRGCLGSC*AWSRVL
Trigger: TAAGACTCTAGACCAGGCCAAACAAGAACCCAAACA...GCCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527971.5
CDS CCA 90 bp AGCCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATTGACTCCTaGAGGGAAACCTCATACAGTGTCCGCGCTGATGCCAATCTGGCT +
Preference number: 5 (lower is better)
Translates to: SHFSTASPGAYRIDS*RETSYSVRADANLA
Trigger: AGCCAGATTGGCATCAGCGCGGACACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCCATAGCCCATCCCTaGATAATCTGGGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: PPGHHQKAMYLRASGGREAIAHP*IIWVNS
Trigger: GCTGTTCACCCAGATTATCAAGGGATGGGCTATGGC...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp CAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTGCCGGGGTGTTTGGGTTCTTGTTaGGCCTCTAACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QTHRPRGRIRGQLPGVPGCLGSC*ASNFLF
Trigger: GAAAAGGAAGTTAGAGGCCAAACAAGAACCCAAACA...CCCCGGCACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp AGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGCTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 5 (lower is better)
Translates to: SFQVCRGLSLLLTVQPERLPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...CCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp AAAAGTGTCACAGACACAGAGAAGAGCTGCTGGCTCTTCTGGGCCTaGCTCTTGCTCGGGACGTGCGGGAGGGAAATATGTGCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KSVTDTEKSCWLFWA*LLLGTCGREICAPL
Trigger: GAGAGGAGCACATATTTCCCTCCCGCACGTCCCGAGCAAGAGGCAGGCCCAGAAGAGCCAGCAGCTCTTCTCTGTGTCTGTGACACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS CCA 90 bp GCCTGGTCTAGAGTCTTACAGCAGTCCACCAACACACCCACAGGCTaGGTGTCCTGCAAGCTCTCCTTCAACTCCCTCAGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: AWSRVLQQSTNTPTG*VSCKLSFNSLSSRS
Trigger: TGATCTGGAGCTGAGGGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTTGGTGGACTGCTGTAAGACTCTAGACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp AACCGCCGTCGGAAATCTTTCCAGAAGGCTGCAAGCCAGCCTCCCTaGTCAGCCTCATCCTCATCAGTGAGCGTCTTCAGCATGATGCAC +
Preference number: 5 (lower is better)
Translates to: NRRRKSFQKAASQPP*SASSSSVSVFSMMH
Trigger: GTGCATCATGCTGAAGACGCTCACTGATGAGGATGAGGCTGACCAGGGAGGCTGGCTTGCAGCCTTCTGGAAAGATTTCCGACGGCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000530017.1
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp AGTCCCATCAACTGGCCCGAGGGCAGCTCAATCTCCTTTTCCAGCTaGTCCACAGACTTATGCTGCAGGCCAATCCCCAAGAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPINWPEGSSISFSS*STDLCCRPIPKRRA
Trigger: GGCTCTTCTCTTGGGGATTGGCCTGCAGCATAAGTCTGTGGACCAGCTGGAAAAGGAGATTGAGCTGCCCTCGGGCCAGTTGATGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp CTCCTCAAAAGTGTCACAGACACAGAGAAGAGCTGCTGGCTCTTCTaGGCCTGCCTCTTGCTCGGGACGTGCGGGAGGGAAATATGTGCT +
Preference number: 5 (lower is better)
Translates to: LLKSVTDTEKSCWLF*ACLLLGTCGREICA
Trigger: AGCACATATTTCCCTCCCGCACGTCCCGAGCAAGAGGCAGGCCCAGAAGAGCCAGCAGCTCTTCTCTGTGTCTGTGACACTTTTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS-3UTR CAA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTCACATGCCGAAGGTATaGCCCAGGATCTTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSHMPKV*PRILWV
Trigger: GACCCACAAGATCCTGGGCAATACCTTCGGCATGTG...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CAA 90 bp CAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGACTATCCGAGTGATGTaGAGGCAATCCAGGCACAGC +
Preference number: 5 (lower is better)
Translates to: QVCRGLSLLLTVQPERVQTIRVM*RQSRHS
Trigger: GCTGTGCCTGGATTGCCTCAACATCACTCGGATAGT...CTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAGGGCCATAAGCCGTaGGAGGAAAACTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: MYLRASGGREATWLPHVWEGHKP*EENFRG
Trigger: GCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCTC...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTAGCCATAGCCCATCCCTaGATAATCTGGGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLAIAHP*IIWVNS
Trigger: GCTGTTCACCCAGATTATCAAGGGATGGGCTATGGC...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCTGCCTTTAGCCAGGTaGAGCTCACAGACACACAGG +
Preference number: 5 (lower is better)
Translates to: DWAGRERLVAILEMAVPSLPLAR*SSQTHR
Trigger: CCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAG...GCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp AGAGTCTTACAGCAGTCCACCAACACACCCACAGGCTGGGTGTCCTaGAAGCTCTCCTTCAACTCCCTCAGCTCCAGATCAGAAGGACCA +
Preference number: 5 (lower is better)
Translates to: RVLQQSTNTPTGWVS*KLSFNSLSSRSEGP
Trigger: TGGTCCTTCTGATCTGGAGCTGAGGGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTTGGTGGACTGCTGTAAGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCCGAGCCTTCACAGTaGCTTTGGATAACATGTGAT +
Preference number: 5 (lower is better)
Translates to: PPGHHQKAMYLRASGGREAEPSQ*LWITCD
Trigger: ATCACATGTTATCCAAAGCAACTGTGAAGGCTCGGC...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR CAA 90 bp GTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTCCTGGCCAGCAAGTTaGGAGTTAAGGCTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: VELTDTQAQRPNSRPASRSWPAS*ELRLQN
Trigger: ATTTTGAAGCCTTAACTCCAAACTTGCTGGCCAGGA...CCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CAA 90 bp GTTGAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGGAGGTAACAAAGATATaGGAGTACCCAAATGCCACC +
Preference number: 5 (lower is better)
Translates to: VELTDTQAQRPNSRPASREVTKI*EYPNAT
Trigger: GGTGGCATTTGGGTACTCCAATATCTTTGTTACCTC...CCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTTCCCCTGAAGCCTTCTaGCCTCGAGACAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: VPGPLVAFNSPAREGSVSSPEAF*PRDRLF
Trigger: GAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGGA...ACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTGCCATAGCCCATCCCTaGATAATCTGGGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVAIAHP*IIWVNS
Trigger: GCTGTTCACCCAGATTATCAAGGGATGGGCTATGGC...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GCGGCCAGCTTCCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCATCTCCTGAAATTCCTTaGCTGCTTCATCTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: AASFQVCRGLSLLLTVQPSPEIP*LLHLGR
Trigger: ACGACCTAGATGAAGCAGCAAAGGAATTTCAGGAGA...TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGGAAGCTGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGATGCCGGGGCCTCTCGTaGCTTTTAACAGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRCRGLS*LLTVQP
Trigger: TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCA...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp GCCTCCATGGTGGCAACGTGGGAGGAGATGGGCAGGATGTTGAGCTaGTCATCAATGACGAGACACTTCTTACAAGAGGCCAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: ASMVATWEEMGRMLS*SSMTRHFLQEARDR
Trigger: TCTGTCTCTGGCCTCTTGTAAGAAGTGTCTCGTCATTGATGACCAGCTCAACATCCTGCCCATCTCCTCCCACGTTGCCACCATGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGAACAAAGAGAGATCTTaGCCGCTCAGCTACTCCATT +
Preference number: 5 (lower is better)
Translates to: GHHQKAMYLRASGGREATNKERS*PLSYSI
Trigger: AATGGAGTAGCTGAGCGGCAAAGATCTCTCTTTGTT...CGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR CAA 90 bp GGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGGAGGTAACAAAGATATaGGAGTACCCAAATGCCACC +
Preference number: 5 (lower is better)
Translates to: GHHQKAMYLRASGGREATEVTKI*EYPNAT
Trigger: GGTGGCATTTGGGTACTCCAATATCTTTGTTACCTC...CGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCAGGCCTCTCATTCAATTaGAGGAGTAAAGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QKAMYLRASGGREATWLPGLSFN*RSKGGR
Trigger: CCTGCCTCCTTTACTCCTCAAATTGAATGAGAGGCC...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTGGCCTCTCATTCAATTaGAGGAGTAAAGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GVPGPLVAFNSPAREGSVGLSFN*RSKGGR
Trigger: CCTGCCTCCTTTACTCCTCAAATTGAATGAGAGGCC...AACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGGCCTCTCATTCAATTaGAGGAGTAAAGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RALDWAGRERLVAILEMAGLSFN*RSKGGR
Trigger: CCTGCCTCCTTTACTCCTCAAATTGAATGAGAGGCC...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGTCTCCTGAAATTCCTTaGCTGCTTCATCTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: PPGHHQKAMYLRASGGRESPEIP*LLHLGR
Trigger: ACGACCTAGATGAAGCAGCAAAGGAATTTCAGGAGA...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCGTTCGGCCCAGCTTaGTTCAAAACTTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSAFGPA*FKTSFH
Trigger: GTGGAATGAAGTTTTGAACAAAGCTGGGCCGAACGC...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CAA 90 bp GAGCTCACAGACACACAGGCCCAGAGGCCGAATTCGCGGCCAGCTTCCAGGTGTCTGTTCTTCAACTTCTaGCTCTGTTTGGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: ELTDTQAQRPNSRPASRCLFFNF*LCLGSC
Trigger: ACAAGAACCCAAACAGAGCAAGAAGTTGAAGAACAG...ACACCTGGAAGCTGGCCGCGAATTCGGCCTCTGGGCCTGTGTGTCTGTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp CACGGCTGCCATAGCCCATCCCTTGATAATCTGGGTGAACAGCAATaGGAACGACCCTTCCACCAGACAGACCACCAAAGTCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: HGCHSPSLDNLGEQQ*ERPFHQTDHQSLDL
Trigger: AAGATCCAGACTTTGGTGGTCTGTCTGGTGGAAGGGTCGTTCGCATTGCTGTTCACCCAGATTATCAAGGGATGGGCTATGGCAGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp TCAGCCTCATCCTCATCAGTGAGCGTCTTCAGCATGATGCACGAGTaGTCTCCGGTCAGGTCATTCTGGGCAACACAGAGGTTTAACTGG +
Preference number: 5 (lower is better)
Translates to: SASSSSVSVFSMMHE*SPVRSFWATQRFNW
Trigger: CCAGTTAAACCTCTGTGTTGCCCAGAATGACCTGACCGGAGAGCACTCGTGCATCATGCTGAAGACGCTCACTGATGAGGATGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS CCA 90 bp AGCTTCACAACTTTGCGGATGATCCGGTTGAAAAGTCCCATCAACTaGCCCGAGGGCAGCTCAATCTCCTTTTCCAGCTGGTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: SFTTLRMIRLKSPIN*PEGSSISFSSWSTD
Trigger: GTCTGTGGACCAGCTGGAAAAGGAGATTGAGCTGCCCTCGGGCCAGTTGATGGGACTTTTCAACCGGATCATCCGCAAAGTTGTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTATCCTGGCCAGCAAGTTaGGAGTTAAGGCTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLSWPAS*ELRLQN
Trigger: ATTTTGAAGCCTTAACTCCAAACTTGCTGGCCAGGA...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CAA 90 bp CCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGAATAGCTTCACAACTTaGCGGATGATCCGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: PPGHHQKAMYLRASGGRENSFTT*RMIRLK
Trigger: TTTCAACCGGATCATCCGCAAAGTTGTGAAGCTATT...CTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp GTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGCGTTCGGCCCAGCTTaGTTCAAAACTTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: VCRGLSLLLTVQPERVQLAFGPA*FKTSFH
Trigger: GTGGAATGAAGTTTTGAACAAAGCTGGGCCGAACGC...TAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000531159.6
CDS-3UTR CAA 90 bp CAGCCTCCTGGGCACCACCAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGATGTTTGGGTTCTTGTTaGGCCTCTAACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QPPGHHQKAMYLRASGGRCLGSC*ASNFLF
Trigger: GAAAAGGAAGTTAGAGGCCAAACAAGAACCCAAACA...TCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTGGTGGTGCCCAGGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000615292.1
CDS-3UTR CAA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAACTTCTTGCTCTGTTaGGGTTCTTGTTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMNFLLC*GSCLAS
Trigger: AGAGGCCAAACAAGAACCCAAACAGAGCAAGAAGTT...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTCTGTTCTTCAACTTCTaGCTCTGTTTGGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GPQAVERQRGFHMCGNETLFFNF*LCLGSC
Trigger: ACAAGAACCCAAACAGAGCAAGAAGTTGAAGAACAG...AGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTAACTTCTTGCTCTGTTaGGGTTCTTGTTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSNFLLC*GSCLAW
Trigger: CCAGGCCAAACAAGAACCCAAACAGAGCAAGAAGTT...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527971.5
CDS GCA 90 bp ACTGTTCTGACACTGTCCATGGAATCAGGTCCCCTGAAGCCTTCTTaGCTCGAGACAGACTGTTCAAGATGGACTGGCGAGAAATCTCCC +
Preference number: 5 (lower is better)
Translates to: TVLTLSMESGPLKPS*LETDCSRWTGEKSP
Trigger: GGGAGATTTCTCGCCAGTCCATCTTGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGGACCTGATTCCATGGACAGTGTCAGAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGAACAAAGAGAGATCTTaGCCGCTCAGCTACTCCATT +
Preference number: 5 (lower is better)
Translates to: MYLRASGGREATWLPHVWNKERS*PLSYSI
Trigger: AATGGAGTAGCTGAGCGGCAAAGATCTCTCTTTGTT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR CAA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTACTGTGTACAATTGCTaGAGTGAGTTCATGGTCCGT +
Preference number: 5 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSTVYNC*SEFMVR
Trigger: ACGGACCATGAACTCACTCAAGCAATTGTACACAGT...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CAA 90 bp GCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGAATTTCAAGACAGCTTaGGCCTGGTCTAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: AMYLRASGGREATWLPHVNFKTA*AWSRVL
Trigger: TAAGACTCTAGACCAGGCCAAAGCTGTCTTGAAATT...CACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCCAGGGGCGTATCGGATaGACTCCTGGAGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: SSSKETHLGVTLPLARLSQGRIG*TPGGKP
Trigger: AGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTG...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCGCTCGTTTCCAGAACTaGAGGAGCCTGGGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPARFQN*RSLGVK
Trigger: CTTGACCCCCAGGCTCCTCAAGTTCTGGAAACGAGC...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAATAGCTTCACAACTTaGCGGATGATCCGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMNSFTT*RMIRLK
Trigger: TTTCAACCGGATCATCCGCAAAGTTGTGAAGCTATT...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp AGGGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAAACTTCTTGCTCTGTTaGGGTTCTTGTTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RALDWAGRERLVAILEMANFLLC*GSCLAS
Trigger: AGAGGCCAAACAAGAACCCAAACAGAGCAAGAAGTT...TGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CCAGGTGTGCCGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCACTGTTCTTCAACTTCTaGCTCTGTTTGGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: PGVPGPLVAFNSPAREGSLFFNF*LCLGSC
Trigger: ACAAGAACCCAAACAGAGCAAGAAGTTGAAGAACAG...TGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCACACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTGCCGGGGCCTCTCGTaGCTTTTAACAGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SSSKETHLGVTLPLARLSCRGLS*LLTVQP
Trigger: TGGCTGGACTGTTAAAAGCAACGAGAGGCCCCGGCA...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGTCTAAAGAGACCCATTaGGGAGTGACTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: MYLRASGGREATWLPHVWSKETH*GVTLPL
Trigger: TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGA...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGCCCTGGACTGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTTCTAAAGAGACCCATTaGGGAGTGACTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: GPGLGRKRETRGNSRDGSSKETH*GVTLPL
Trigger: TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGA...ACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCAGTCCAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CAGAAAGCGATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCATCTAAAGAGACCCATTaGGGAGTGACTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: QKAMYLRASGGREATWLPSKETH*GVTLPL
Trigger: TAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGA...TGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACATCGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS TCA 90 bp GATATGCCTGGACAACTTGCACAGTCCCATCCAGCTCTGACCATTTaGGCATGTGACTCTGCTTCTGGCCACGGTCTAAGAAAACCCTCT +
Preference number: 5 (lower is better)
Translates to: DMPGQLAQSHPALTI*ACDSASGHGLRKPS
Trigger: AGAGGGTTTTCTTAGACCGTGGCCAGAAGCAGAGTCACATGCTCAAATGGTCAGAGCTGGATGGGACTGTGCAAGTTGTCCAGGCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534509.1
CDS GCA 90 bp GTCACTGAGGGTCTTCATCGTGGGCTCCATGACCACATCCTTCGCTaGCACCATCTGCTCCTCAATGGCCTTTTCCTGAACTTCATTAAA +
Preference number: 5 (lower is better)
Translates to: VTEGLHRGLHDHILR*HHLLLNGLFLNFIK
Trigger: TTTAATGAAGTTCAGGAAAAGGCCATTGAGGAGCAGATGGTGGCAGCGAAGGATGTGGTCATGGAGCCCACGATGAAGACCCTCAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp TTCCAACAAGCTGACAGCCTCGCTGCTTACGGTGTGAATTTCCTGTaGTGTCTCAAGGACCTTTTCCTCCAGACAAGGAAACCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: FQQADSLAAYGVNFL*CLKDLFLQTRKPAF
Trigger: GAAGGCAGGTTTCCTTGTCTGGAGGAAAAGGTCCTTGAGACACCACAGGAAATTCACACCGTAAGCAGCGAGGCTGTCAGCTTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGAATTTCAAGACAGCTTaGGCCTGGTCTAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: MYLRASGGREATWLPHVWNFKTA*AWSRVL
Trigger: TAAGACTCTAGACCAGGCCAAAGCTGTCTTGAAATT...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGCAGATGTTCCTGATATaGCAGAGCATCAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: LKGLRRSRGNVASTCVGMQMFLI*QSIKSF
Trigger: AAAGGATTTGATGCTCTGCAATATCAGGAACATCTG...CATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCCCCTGAAGCCTTCTaGCCTCGAGACAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: SSSKETHLGVTLPLARLSSPEAF*PRDRLF
Trigger: GAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGGA...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp AGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACATTGCGGATGATCCGGTaGAAAAGTCCCATCAACTGG +
Preference number: 5 (lower is better)
Translates to: RDPFGSDSAFSQVELTDTLRMIR*KSPINW
Trigger: CCAGTTGATGGGACTTTTCAACCGGATCATCCGCAA...TGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp GGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGGAATGAGACTATCTAACTTCCTTTTCTaGTCACTTTTCAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: GLRRSRGNVASTCVGMRLSNFLF*SLFRLM
Trigger: CATCAGCCTGAAAAGTGACAAGAAAAGGAAGTTAGA...TAGTCTCATTCCCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGAAACTTCTTGCTCTGTTaGGGTTCTTGTTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRNFLLC*GSCLAS
Trigger: AGAGGCCAAACAAGAACCCAAACAGAGCAAGAAGTT...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGCTGTTCTTCAACTTCTaGCTCTGTTTGGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: MYLRASGGREATWLPHVWLFFNF*LCLGSC
Trigger: ACAAGAACCCAAACAGAGCAAGAAGTTGAAGAACAG...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS TCA 90 bp TGGACAACTTGCACAGTCCCATCCAGCTCTGACCATTTGAGCATGTaGCTCTGCTTCTGGCCACGGTCTAAGAAAACCCTCTTTGAAAGG +
Preference number: 5 (lower is better)
Translates to: WTTCTVPSSSDHLSM*LCFWPRSKKTLFER
Trigger: CCTTTCAAAGAGGGTTTTCTTAGACCGTGGCCAGAAGCAGAGTCACATGCTCAAATGGTCAGAGCTGGATGGGACTGTGCAAGTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534509.1
CDS-3UTR CAA 90 bp ATGTACTTAAGGGCCTCAGGCGGTCGAGAGGCAACGTGGCTTCCACATGTGTGGCAGATGTTCCTGATATaGCAGAGCATCAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: MYLRASGGREATWLPHVWQMFLI*QSIKSF
Trigger: AAAGGATTTGATGCTCTGCAATATCAGGAACATCTG...CCACACATGTGGAAGCCACGTTGCCTCTCGACCGCCTGAGGCCCTTAAGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCTCCCCTGAAGCCTTCTaGCCTCGAGACAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: SLLLTVQPERVQLVRVSSSPEAF*PRDRLF
Trigger: GAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGGA...GGAAGATACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCTCACAGACACACAGGCCCAGATGTTTGGGTTCTTGTTaGGCCTCTAACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LGVTLPLARLSSQTHRPRCLGSC*ASNFLF
Trigger: GAAAAGGAAGTTAGAGGCCAAACAAGAACCCAAACA...TCTGGGCCTGTGTGTCTGTGAGCTCAACCTGGCTAAAGGCAGAGTCACTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS TCA 90 bp TCTATTAACATAGTACAGTTCACAAGCTTCAGGCAAGGGGCAGCCTaGGACTATCCGAGTGATGTTGAGGCAATCCAGGCACAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: SINIVQFTSFRQGAA*DYPSDVEAIQAQQV
Trigger: GACTTGCTGTGCCTGGATTGCCTCAACATCACTCGGATAGTCTCAGGCTGCCCCTTGCCTGAAGCTTGTGAACTGTACTATGTTAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp GAGTTAAGGCTTCAAAATCCTGCAGCACACACATGCCGAAGGTATTaGCCAGGATCTTGTGGGTCTCGTTGTAGTAGCAGTAGCGAATGT +
Preference number: 5 (lower is better)
Translates to: ELRLQNPAAHTCRRY*PGSCGSRCSSSSEC
Trigger: ACATTCGCTACTGCTACTACAACGAGACCCACAAGATCCTGGGCAATACCTTCGGCATGTGTGTGCTGCAGGATTTTGAAGCCTTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS-3UTR CAA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAAATTTCAAGACAGCTTaGGCCTGGTCTAGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRNFKTA*AWSRVL
Trigger: TAAGACTCTAGACCAGGCCAAAGCTGTCTTGAAATT...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TGGGCAGGAAGAGAGAGACTCGTGGCAATTCTAGAGATGGCAGTGCCCAGCCATCAGATGTTCCTGATATaGCAGAGCATCAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: WAGRERLVAILEMAVPSHQMFLI*QSIKSF
Trigger: AAAGGATTTGATGCTCTGCAATATCAGGAACATCTG...ATGGCTGGGCACTGCCATCTCTAGAATTGCCACGAGTCTCTCTCTTCCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 90 bp CATATCACCTCAGTTCACACACAACAGCTGCAAAGATCACTGTCCTaGAATCTCCTCAAAAGTGTCACAGACACAGAGAAGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HITSVHTQQLQRSLS*NLLKSVTDTEKSCW
Trigger: CCAGCAGCTCTTCTCTGTGTCTGTGACACTTTTGAGGAGATTGCAGGACAGTGATCTTTGCAGCTGTTGTGTGTGAACTGAGGTGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS-3UTR CAA 90 bp GGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTAACTGTGTACAATTGCTaGAGTGAGTTCATGGTCCGT +
Preference number: 5 (lower is better)
Translates to: GLSLLLTVQPERVQLVRVTVYNC*SEFMVR
Trigger: ACGGACCATGAACTCACTCAAGCAATTGTACACAGT...TACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CAA 90 bp TCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCTTGCGGATGATCCGGTaGAAAAGTCCCATCAACTGG +
Preference number: 5 (lower is better)
Translates to: SLLLTVQPERVQLVRVSSLRMIR*KSPINW
Trigger: CCAGTTGATGGGACTTTTCAACCGGATCATCCGCAA...GGAAGATACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CGGGGCCTCTCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGATCTAACTTCCTTTTCTaGTCACTTTTCAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: RGLSLLLTVQPERVQLVRSNFLF*SLFRLM
Trigger: CATCAGCCTGAAAAGTGACAAGAAAAGGAAGTTAGA...TCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGAGAGGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS TCA 90 bp TGTGGGTCTCGTTGTAGTAGCAGTAGCGAATGTTTGTGGCTGCTATaGAGAGTTCAAAGGGGTCGTCCTGCTTTATGTTCAGTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: CGSRCSSSSECLWLL*RVQRGRPALCSVFH
Trigger: ATGGAACACTGAACATAAAGCAGGACGACCCCTTTGAACTCTTCATAGCAGCCACAAACATTCGCTACTGCTACTACAACGAGACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS GCA 90 bp GATCTTGTGGGTCTCGTTGTAGTAGCAGTAGCGAATGTTTGTGGCTaGTATGAAGAGTTCAAAGGGGTCGTCCTGCTTTATGTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: DLVGLVVVAVANVCG*YEEFKGVVLLYVQC
Trigger: ACACTGAACATAAAGCAGGACGACCCCTTTGAACTCTTCATAGCAGCCACAAACATTCGCTACTGCTACTACAACGAGACCCACAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS-3UTR CAA 90 bp TCGTTGCTTTTAACAGTCCAGCCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCGCCGAGCCTTCACAGTaGCTTTGGATAACATGTGAT +
Preference number: 5 (lower is better)
Translates to: SLLLTVQPERVQLVRVSSAEPSQ*LWITCD
Trigger: ATCACATGTTATCCAAAGCAACTGTGAAGGCTCGGC...GGAAGATACTCTCACTAACTGAACCCTCTCTGGCTGGACTGTTAAAAGCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257829.8
ENST00000527971.5
CDS-3UTR CAA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCTCCTGGCCAGCAAGTTaGGAGTTAAGGCTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPSWPAS*ELRLQN
Trigger: ATTTTGAAGCCTTAACTCCAAACTTGCTGGCCAGGA...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS-3UTR CAA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCACTGTGTACAATTGCTaGAGTGAGTTCATGGTCCGT +
Preference number: 5 (lower is better)
Translates to: SSSKETHLGVTLPLARLSTVYNC*SEFMVR
Trigger: ACGGACCATGAACTCACTCAAGCAATTGTACACAGT...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS TCA 90 bp GCCAGAGACAGAATAAACCTTTCATTAAATCTTCCCACCACATCCTaGTGGGCCTCAGTTCTGTACCTGGAATGCACATCCATAGTCACT +
Preference number: 5 (lower is better)
Translates to: ARDRINLSLNLPTTS*WASVLYLECTSIVT
Trigger: AGTGACTATGGATGTGCATTCCAGGTACAGAACTGAGGCCCATCAGGATGTGGTGGGAAGATTTAATGAAAGGTTTATTCTGTCTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp TCAAGTTCTAAAGAGACCCATTTGGGAGTGACTCTGCCTTTAGCCAGGTTGAGCAATAGCTTCACAACTTaGCGGATGATCCGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SSSKETHLGVTLPLARLSNSFTT*RMIRLK
Trigger: TTTCAACCGGATCATCCGCAAAGTTGTGAAGCTATT...GCTCAACCTGGCTAAAGGCAGAGTCACTCCCAAATGGGTCTCTTTAGAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp TCCTTTAAATACAAATTCAAACAGAGTATGGAGGTTATCAGGGCTTaGGGAGGTAACAAAGATATTGGAGTACCCAAATGCCACCGCCCC +
Preference number: 5 (lower is better)
Translates to: SFKYKFKQSMEVIRA*GGNKDIGVPKCHRP
Trigger: GGGGCGGTGGCATTTGGGTACTCCAATATCTTTGTTACCTCCCCAAGCCCTGATAACCTCCATACTCTGTTTGAATTTGTATTTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS-3UTR CAA 90 bp CCAGAGAGGGTTCAGTTAGTGAGAGTATCTTCCCATGATCAAACACAGATGCCCTCTAACTTCCTTTTCTaGTCACTTTTCAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PERVQLVRVSSHDQTQMPSNFLF*SLFRLM
Trigger: CATCAGCCTGAAAAGTGACAAGAAAAGGAAGTTAGA...GGGCATCTGTGTTTGATCATGGGAAGATACTCTCACTAACTGAACCCTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp TCTTATAACACCACAGCACTGAAGGCCGAGCCTTCACAGTTGCTTTaGATAACATGTGATGAAGTATTACCACCTGATCTTTTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: SYNTTALKAEPSQLL*ITCDEVLPPDLFLD
Trigger: ATCGAGGAAAAGATCAGGTGGTAATACTTCATCACATGTTATCCAAAGCAACTGTGAAGGCTCGGCCTTCAGTGCTGTGGTGTTATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS-3UTR CAA 90 bp CTAAAAAGCTGGCTCAAAGCAAAATATGAACTTATAGGAAAGGAGGGCCCTGGAGAGGTAACAAAGATATaGGAGTACCCAAATGCCACC +
Preference number: 5 (lower is better)
Translates to: LKSWLKAKYELIGKEGPGEVTKI*EYPNAT
Trigger: GGTGGCATTTGGGTACTCCAATATCTTTGTTACCTC...TCCAGGGCCCTCCTTTCCTATAAGTTCATATTTTGCTTTGAGCCAGCTTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 90 bp TTCCTTCTTGTGTTTCTCCTGAAATTCCTTTGCTGCTTCATCCTGTaGTTAAGGACCCATAAAGAGACTAAGTCAGAGTCAAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: FLLVFLLKFLCCFIL*LRTHKETKSESRIE
Trigger: TTCAATCCTTGACTCTGACTTAGTCTCTTTATGGGTCCTTAACCACAGGATGAAGCAGCAAAGGAATTTCAGGAGAAACACAAGAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532555.1
CDS CCA 90 bp TATTGCAGAGCATCAAATCCTTTAAATACAAATTCAAACAGAGTATaGAGGTTATCAGGGCTTGGGGAGGTAACAAAGATATTGGAGTAC +
Preference number: 5 (lower is better)
Translates to: YCRASNPLNTNSNRV*RLSGLGEVTKILEY
Trigger: GTACTCCAATATCTTTGTTACCTCCCCAAGCCCTGATAACCTCCATACTCTGTTTGAATTTGTATTTAAAGGATTTGATGCTCTGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS TCA 72 bp GGGAGCACGGAACAACTCCGAAAGAGAAGGCACAGCTaGCTGCCCCTAGCGTATGCCTGGTGTCCGGGTCAC +
Preference number: 6 (lower is better)
Translates to: GSTEQLRKRRHS*LPLAYAWCPGH
Trigger: GTGACCCGGACACCAGGCATACGCTAGGGGCAGTCAGCTGTGCCTTCTCTTTCGGAGTTGTTCCGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000532503.5
CDS GCA 72 bp CCGAAAGAGAAGGCACAGCTGACTGCCCCTAGCGTATaGCTGGTGTCCGGGTCACGTAGTAAGCCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: PKEKAQLTAPSV*LVSGSRSKPGS
Trigger: GGAGCCAGGCTTACTACGTGACCCGGACACCAGGCATACGCTAGGGGCAGTCAGCTGTGCCTTCTCTTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000532503.5
CDS TCA 72 bp CCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATTaGCTCCTGGAGGGAAACCTCATACAGTGTCCGCGC +
Preference number: 6 (lower is better)
Translates to: PLLHCIPRGVSD*LLEGNLIQCPR
Trigger: GCGCGGACACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp TCCACTGCATCCCCAGGGGCGTATCGGATTGACTCCTaGAGGGAAACCTCATACAGTGTCCGCGCTGATGCC +
Preference number: 6 (lower is better)
Translates to: STASPGAYRIDS*RETSYSVRADA
Trigger: GGCATCAGCGCGGACACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 72 bp GCCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATaGACTCCTGGAGGGAAACCTCATACAGTGTCCGCG +
Preference number: 6 (lower is better)
Translates to: ATSPLHPQGRIG*TPGGKPHTVSA
Trigger: CGCGGACACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS TCA 72 bp TCTGGGCGCTCTGTTGACGGAGCTGCTGAATTAGCTTaGGGGACAGTGACCGGCCAGTGCCCTCATAGCCAT +
Preference number: 6 (lower is better)
Translates to: SGRSVDGAAELA*GTVTGQCPHSH
Trigger: ATGGCTATGAGGGCACTGGCCGGTCACTGTCCCTCAAGCTAATTCAGCAGCTCCGTCAACAGAGCGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 72 bp CAGCAGTCCACCAACACACCCACAGGCTGGGTGTCCTaGAAGCTCTCCTTCAACTCCCTCAGCTCCAGATCA +
Preference number: 6 (lower is better)
Translates to: QQSTNTPTGWVS*KLSFNSLSSRS
Trigger: TGATCTGGAGCTGAGGGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTTGGTGGACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CAA 90 bp GGCAGGGCCTCCATGGTGGCAACGTGGGAGGAGATGGGCAGGATGTaGAGCTGGTCATCAATGACGAGACACTTCTTACAAGAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: GRASMVATWEEMGRM*SWSSMTRHFLQEAR
Trigger: TCTGGCCTCTTGTAAGAAGTGTCTCGTCATTGATGACCAGCTCAACATCCTGCCCATCTCCTCCCACGTTGCCACCATGGAGGCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CAA 90 bp AGTCATTCAGCCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATaGACTCCTGGAGGGAAACCTCATACAGTGTCCGCGCTGATGCCA +
Preference number: 6 (lower is better)
Translates to: SHSATSPLHPQGRIG*TPGGKPHTVSALMP
Trigger: TGGCATCAGCGCGGACACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGGCTGAATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp AGAGTCTTACAGCAGTCCACCAACACACCCACAGGCTaGGTGTCCTGCAAGCTCTCCTTCAACTCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RVLQQSTNTPTG*VSCKLSFNSLS
Trigger: GCTGAGGGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTTGGTGGACTGCTGTAAGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp CGGAAATCTTTCCAGAAGGCTGCAAGCCAGCCTCCCTaGTCAGCCTCATCCTCATCAGTGAGCGTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RKSFQKAASQPP*SASSSSVSVFS
Trigger: GCTGAAGACGCTCACTGATGAGGATGAGGCTGACCAGGGAGGCTGGCTTGCAGCCTTCTGGAAAGATTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000530017.1
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp AACTGGCCCGAGGGCAGCTCAATCTCCTTTTCCAGCTaGTCCACAGACTTATGCTGCAGGCCAATCCCCAAG +
Preference number: 6 (lower is better)
Translates to: NWPEGSSISFSS*STDLCCRPIPK
Trigger: CTTGGGGATTGGCCTGCAGCATAAGTCTGTGGACCAGCTGGAAAAGGAGATTGAGCTGCCCTCGGGCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 72 bp TCCTCATCAGTGAGCGTCTTCAGCATGATGCACGAGTaGTCTCCGGTCAGGTCATTCGGGGTCTGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: SSSVSVFSMMHE*SPVRSFGVCLR
Trigger: TCTGAGACAGACCCCGAATGACCTGACCGGAGAGCACTCGTGCATCATGCTGAAGACGCTCACTGATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 72 bp TCCTCATCAGTGAGCGTCTTCAGCATGATGCACGAGTaGTCTCCGGTCAGGTCATTCTGGGCAACACAGAGG +
Preference number: 6 (lower is better)
Translates to: SSSVSVFSMMHE*SPVRSFWATQR
Trigger: CCTCTGTGTTGCCCAGAATGACCTGACCGGAGAGCACTCGTGCATCATGCTGAAGACGCTCACTGATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS CCA 72 bp GTGGCAACGTGGGAGGAGATGGGCAGGATGTTGAGCTaGTCATCAATGACGAGACACTTCTTACAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: VATWEEMGRMLS*SSMTRHFLQEA
Trigger: GGCCTCTTGTAAGAAGTGTCTCGTCATTGATGACCAGCTCAACATCCTGCCCATCTCCTCCCACGTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp ACTTTGCGGATGATCCGGTTGAAAAGTCCCATCAACTaGCCCGAGGGCAGCTCAATCTCCTTTTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TLRMIRLKSPIN*PEGSSISFSSW
Trigger: CCAGCTGGAAAAGGAGATTGAGCTGCCCTCGGGCCAGTTGATGGGACTTTTCAACCGGATCATCCGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp AGCATGATGCACGAGTGCTCTCCGGTCAGGTCATTCTaGGCAACACAGAGGTTTAACTGGCACCAAGAACCC +
Preference number: 6 (lower is better)
Translates to: SMMHECSPVRSF*ATQRFNWHQEP
Trigger: GGGTTCTTGGTGCCAGTTAAACCTCTGTGTTGCCCAGAATGACCTGACCGGAGAGCACTCGTGCATCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530017.1
CDS CAA 90 bp TCACAAGCTTCAGGCAAGGGGCAGCCTGAGACTATCCGAGTGATGTaGAGGCAATCCAGGCACAGCAAGTCATTCAGCCACTTCTCCACT +
Preference number: 6 (lower is better)
Translates to: SQASGKGQPETIRVM*RQSRHSKSFSHFST
Trigger: AGTGGAGAAGTGGCTGAATGACTTGCTGTGCCTGGATTGCCTCAACATCACTCGGATAGTCTCAGGCTGCCCCTTGCCTGAAGCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS TCA 72 bp TGCACAGTCCCATCCAGCTCTGACCATTTGAGCATGTaGCTCTGCTTCTGGCCACGGTCTAAGAAAACCCTC +
Preference number: 6 (lower is better)
Translates to: CTVPSSSDHLSM*LCFWPRSKKTL
Trigger: GAGGGTTTTCTTAGACCGTGGCCAGAAGCAGAGTCACATGCTCAAATGGTCAGAGCTGGATGGGACTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534509.1
CDS TCA 72 bp GGACAACTTGCACAGTCCCATCCAGCTCTGACCATTTaGGCATGTGACTCTGCTTCTGGCCACGGTCTAAGA +
Preference number: 6 (lower is better)
Translates to: GQLAQSHPALTI*ACDSASGHGLR
Trigger: TCTTAGACCGTGGCCAGAAGCAGAGTCACATGCTCAAATGGTCAGAGCTGGATGGGACTGTGCAAGTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534509.1
CDS TCA 72 bp ATATGCCTGGACAACTTGCACAGTCCCATCCAGCTCTaGCCATTTGAGCATGTGACTCTGCTTCTGGCCACG +
Preference number: 6 (lower is better)
Translates to: ICLDNLHSPIQL*PFEHVTLLLAT
Trigger: CGTGGCCAGAAGCAGAGTCACATGCTCAAATGGTCAGAGCTGGATGGGACTGTGCAAGTTGTCCAGGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534509.1
CDS GCA 72 bp CTTCATAGTACATCTGCAGCAGCTGCAGAGCACGGCTaGCATAGCCCATCCCTTGATAATCTGGGTGAACAG +
Preference number: 6 (lower is better)
Translates to: LHSTSAAAAEHG*HSPSLDNLGEQ
Trigger: CTGTTCACCCAGATTATCAAGGGATGGGCTATGGCAGCCGTGCTCTGCAGCTGCTGCAGATGTACTATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp CTGAAGCCTTCTTGCCTCGAGACAGACTGTTCAAGATaGACTGGCGAGAAATCTCCCCTTCAAGGCACACCT +
Preference number: 6 (lower is better)
Translates to: LKPSCLETDCSR*TGEKSPLQGTP
Trigger: AGGTGTGCCTTGAAGGGGAGATTTCTCGCCAGTCCATCTTGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 90 bp CTAGCCCACCACCTTCCACTGTTTCTACAGTCCTGGCCAGCAAGTTaGGAGTTAAGGCTTCAAAATCCTGCAGCACACACATGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: LAHHLPLFLQSWPAS*ELRLQNPAAHTCRR
Trigger: CCTTCGGCATGTGTGTGCTGCAGGATTTTGAAGCCTTAACTCCAAACTTGCTGGCCAGGACTGTAGAAACAGTGGAAGGTGGTGGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS CAA 90 bp GGGAGAGTTCTTGTAGTGAGAAGCCACGTAGAGGGCCATAAGCCGTaGGAGGAAAACTTCAGAGGCCTTGTGGTAGCAAAAGAGGGTATC +
Preference number: 6 (lower is better)
Translates to: GRVLVVRSHVEGHKP*EENFRGLVVAKEGI
Trigger: GATACCCTCTTTTGCTACCACAAGGCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCTCTACGTGGCTTCTCACTACAAGAACTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 90 bp AACTGTTCTGACACTGTCCATGGAATCAGGTCCCCTGAAGCCTTCTaGCCTCGAGACAGACTGTTCAAGATGGACTGGCGAGAAATCTCC +
Preference number: 6 (lower is better)
Translates to: NCSDTVHGIRSPEAF*PRDRLFKMDWREIS
Trigger: GGAGATTTCTCGCCAGTCCATCTTGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGGACCTGATTCCATGGACAGTGTCAGAACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 72 bp CATAGCCCATCCCTTGATAATCTGGGTGAACAGCAATaGGAACGACCCTTCCACCAGACAGACCACCAAAGT +
Preference number: 6 (lower is better)
Translates to: HSPSLDNLGEQQ*ERPFHQTDHQS
Trigger: ACTTTGGTGGTCTGTCTGGTGGAAGGGTCGTTCGCATTGCTGTTCACCCAGATTATCAAGGGATGGGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CCA 72 bp GCTGACAGCCTCGCTGCTTACGGTGTGAATTTCCTGTaGTGTCTCAAGGACCTTTTCCTCCAGACAAGGAAA +
Preference number: 6 (lower is better)
Translates to: ADSLAAYGVNFL*CLKDLFLQTRK
Trigger: TTTCCTTGTCTGGAGGAAAAGGTCCTTGAGACACCACAGGAAATTCACACCGTAAGCAGCGAGGCTGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 72 bp TCCATGGTGGCAACGTGGGAGGAGATGGGCAGGATGTaGAGCTGGTCATCAATGACGAGACACTTCTTACAA +
Preference number: 6 (lower is better)
Translates to: SMVATWEEMGRM*SWSSMTRHFLQ
Trigger: TTGTAAGAAGTGTCTCGTCATTGATGACCAGCTCAACATCCTGCCCATCTCCTCCCACGTTGCCACCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS TCA 72 bp CATGTCCATGATGAGGTGATAGTCCACCATATTCCGTaGATACATCTCCAGCCGCTTCAGGTCATAGGGGAG +
Preference number: 6 (lower is better)
Translates to: HVHDEVIVHHIP*IHLQPLQVIGE
Trigger: CTCCCCTATGACCTGAAGCGGCTGGAGATGTATTCACGGAATATGGTGGACTATCACCTCATCATGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 72 bp CTTCAAAATCCTGCAGCACACACATGCCGAAGGTATTaGCCAGGATCTTGTGGGTCTCGTTGTAGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: LQNPAAHTCRRY*PGSCGSRCSSS
Trigger: ACTGCTACTACAACGAGACCCACAAGATCCTGGGCAATACCTTCGGCATGTGTGTGCTGCAGGATTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS GCA 72 bp GGTGAAAAATTATTACCTAAGTATAATGCCCAGACCTaGAGCCAGGCACTGCGGGCAAGCTCCACGGAAAAC +
Preference number: 6 (lower is better)
Translates to: GEKLLPKYNAQT*SQALRASSTEN
Trigger: GTTTTCCGTGGAGCTTGCCCGCAGTGCCTGGCTGCAGGTCTGGGCATTATACTTAGGTAATAATTTTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529523.5
CDS CCA 72 bp ATGGCGGCAGCTTCATCAATCACAACTAGTTCAGCCTaGCCCAGCTTCACAGCATCTGCAGGATGTATATAC +
Preference number: 6 (lower is better)
Translates to: MAAASSITTSSA*PSFTASAGCIY
Trigger: GTATATACATCCTGCAGATGCTGTGAAGCTGGGCCAGGCTGAACTAGTTGTGATTGATGAAGCTGCCGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 72 bp CTTGTAGTGAGAAGCCACGTAGAGGGCCATAAGCCGTaGGAGGAAAACTTCAGAGGCCTTGTGGTAGCAAAA +
Preference number: 6 (lower is better)
Translates to: LVVRSHVEGHKP*EENFRGLVVAK
Trigger: TTTTGCTACCACAAGGCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCTCTACGTGGCTTCTCACTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 90 bp GTTCTGTACCTGGAATGCACATCCATAGTCACTGTGTACAATTGCTaGAGTGAGTTCATGGTCCGTAGGAGGATGACCACTAGCCCACCA +
Preference number: 6 (lower is better)
Translates to: VLYLECTSIVTVYNC*SEFMVRRRMTTSPP
Trigger: TGGTGGGCTAGTGGTCATCCTCCTACGGACCATGAACTCACTCAAGCAATTGTACACAGTGACTATGGATGTGCATTCCAGGTACAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS CAA 72 bp CACCTTCCACTGTTTCTACAGTCCTGGCCAGCAAGTTaGGAGTTAAGGCTTCAAAATCCTGCAGCACACACA +
Preference number: 6 (lower is better)
Translates to: HLPLFLQSWPAS*ELRLQNPAAHT
Trigger: TGTGTGTGCTGCAGGATTTTGAAGCCTTAACTCCAAACTTGCTGGCCAGGACTGTAGAAACAGTGGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS CAA 72 bp TCATTAAATAGCTTCACAACTTTGCGGATGATCCGGTaGAAAAGTCCCATCAACTGGCCCGAGGGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SLNSFTTLRMIR*KSPINWPEGSS
Trigger: TGAGCTGCCCTCGGGCCAGTTGATGGGACTTTTCAACCGGATCATCCGCAAAGTTGTGAAGCTATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 90 bp CACCTGATCTTTTCCTCGATCCCCAACTACAACAAAGAGAGATCTTaGCCGCTCAGCTACTCCATTCTCAATGAGAATCCGGATTCGGTT +
Preference number: 6 (lower is better)
Translates to: HLIFSSIPNYNKERS*PLSYSILNENPDSV
Trigger: AACCGAATCCGGATTCTCATTGAGAATGGAGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGGATCGAGGAAAAGATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS GCA 72 bp TTTCCTCGATCCCCAACTACAACAAAGAGAGATCTTTaGCGCTCAGCTACTCCATTCTCAATGAGAATCCGG +
Preference number: 6 (lower is better)
Translates to: FPRSPTTTKRDL*RSATPFSMRIR
Trigger: CCGGATTCTCATTGAGAATGGAGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGGATCGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS GCA 72 bp GGTCTCGTTGTAGTAGCAGTAGCGAATGTTTGTGGCTaGTATGAAGAGTTCAAAGGGGTCGTCCTGCTTTAT +
Preference number: 6 (lower is better)
Translates to: GLVVVAVANVCG*YEEFKGVVLLY
Trigger: ATAAAGCAGGACGACCCCTTTGAACTCTTCATAGCAGCCACAAACATTCGCTACTGCTACTACAACGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS GCA 72 bp TACCTGGAATGCACATCCATAGTCACTGTGTACAATTaGTTGAGTGAGTTCATGGTCCGTAGGAGGATGACC +
Preference number: 6 (lower is better)
Translates to: YLECTSIVTVYN*LSEFMVRRRMT
Trigger: GGTCATCCTCCTACGGACCATGAACTCACTCAAGCAATTGTACACAGTGACTATGGATGTGCATTCCAGGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS GCA 72 bp CATCGTCCCCACGGATTATGTATTCAGAGAGGTCCATaGTCTTCAGCTTCCCTACTTCCTTCTTGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: HRPHGLCIQRGP*SSASLLPSCVS
Trigger: AGAAACACAAGAAGGAAGTAGGGAAGCTGAAGAGCATGGACCTCTCTGAATACATAATCCGTGGGGACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000532555.1
ENST00000615292.1
CDS CAA 72 bp CTGGAATGCACATCCATAGTCACTGTGTACAATTGCTaGAGTGAGTTCATGGTCCGTAGGAGGATGACCACT +
Preference number: 6 (lower is better)
Translates to: LECTSIVTVYNC*SEFMVRRRMTT
Trigger: AGTGGTCATCCTCCTACGGACCATGAACTCACTCAAGCAATTGTACACAGTGACTATGGATGTGCATTCCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
CDS TCA 72 bp AGAGAGATCTTTGCCGCTCAGCTACTCCATTCTCAATaGGAATCCGGATTCGGTTATCCACCTTTTTCCGAT +
Preference number: 6 (lower is better)
Translates to: REIFAAQLLHSQ*ESGFGYPPFSD
Trigger: ATCGGAAAAAGGTGGATAACCGAATCCGGATTCTCATTGAGAATGGAGTAGCTGAGCGGCAAAGATCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
ENST00000532503.5
CDS TCA 72 bp CGTTGTAGTAGCAGTAGCGAATGTTTGTGGCTGCTATaGAGAGTTCAAAGGGGTCGTCCTGCTTTATGTTCA +
Preference number: 6 (lower is better)
Translates to: RCSSSSECLWLL*RVQRGRPALCS
Trigger: TGAACATAAAGCAGGACGACCCCTTTGAACTCTTCATAGCAGCCACAAACATTCGCTACTGCTACTACAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531159.6
CDS CCA 72 bp ACCACAGCACTGAAGGCCGAGCCTTCACAGTTGCTTTaGATAACATGTGATGAAGTATTACCACCTGATCTT +
Preference number: 6 (lower is better)
Translates to: TTALKAEPSQLL*ITCDEVLPPDL
Trigger: AAGATCAGGTGGTAATACTTCATCACATGTTATCCAAAGCAACTGTGAAGGCTCGGCCTTCAGTGCTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS CAA 72 bp TTTTCCTCGATCCCCAACTACAACAAAGAGAGATCTTaGCCGCTCAGCTACTCCATTCTCAATGAGAATCCG +
Preference number: 6 (lower is better)
Translates to: FSSIPNYNKERS*PLSYSILNENP
Trigger: CGGATTCTCATTGAGAATGGAGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGGATCGAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS TCA 72 bp AGAATAAACCTTTCATTAAATCTTCCCACCACATCCTaGTGGGCCTCAGTTCTGTACCTGGAATGCACATCC +
Preference number: 6 (lower is better)
Translates to: RINLSLNLPTTS*WASVLYLECTS
Trigger: GGATGTGCATTCCAGGTACAGAACTGAGGCCCATCAGGATGTGGTGGGAAGATTTAATGAAAGGTTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000531159.6
ENST00000615292.1
CDS CAA 72 bp TATAACACCACAGCACTGAAGGCCGAGCCTTCACAGTaGCTTTGGATAACATGTGATGAAGTATTACCACCT +
Preference number: 6 (lower is better)
Translates to: YNTTALKAEPSQ*LWITCDEVLPP
Trigger: AGGTGGTAATACTTCATCACATGTTATCCAAAGCAACTGTGAAGGCTCGGCCTTCAGTGCTGTGGTGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS CAA 90 bp GCTCTTTCTTATAACACCACAGCACTGAAGGCCGAGCCTTCACAGTaGCTTTGGATAACATGTGATGAAGTATTACCACCTGATCTTTTC +
Preference number: 6 (lower is better)
Translates to: ALSYNTTALKAEPSQ*LWITCDEVLPPDLF
Trigger: GAAAAGATCAGGTGGTAATACTTCATCACATGTTATCCAAAGCAACTGTGAAGGCTCGGCCTTCAGTGCTGTGGTGTTATAAGAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257829.8
ENST00000527971.5
ENST00000529523.5
ENST00000531723.1
CDS CAA 72 bp TTCTTTGTCTCTCTGTTCTTCAACTTCTTGCTCTGTTaGGGTTCTTGTTTGGCCTGGTCTAGAGTCTTACAG +
Preference number: 6 (lower is better)
Translates to: FFVSLFFNFLLC*GSCLAWSRVLQ
Trigger: CTGTAAGACTCTAGACCAGGCCAAACAAGAACCCAAACAGAGCAAGAAGTTGAAGAACAGAGAGACAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527971.5
CDS CCA 72 bp TACAAATTCAAACAGAGTATGGAGGTTATCAGGGCTTaGGGAGGTAACAAAGATATTGGAGTACCCAAATGC +
Preference number: 6 (lower is better)
Translates to: YKFKQSMEVIRA*GGNKDIGVPKC
Trigger: GCATTTGGGTACTCCAATATCTTTGTTACCTCCCCAAGCCCTGATAACCTCCATACTCTGTTTGAATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS GCA 72 bp ATGAGAATCCGGATTCGGTTATCCACCTTTTTCCGATaGATGGTGAAAAATTATTACCTAAGTATAATGCCC +
Preference number: 6 (lower is better)
Translates to: MRIRIRLSTFFR*MVKNYYLSIMP
Trigger: GGGCATTATACTTAGGTAATAATTTTTCACCATGCATCGGAAAAAGGTGGATAACCGAATCCGGATTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529523.5
CDS CCA 72 bp GCATCAAATCCTTTAAATACAAATTCAAACAGAGTATaGAGGTTATCAGGGCTTGGGGAGGTAACAAAGATA +
Preference number: 6 (lower is better)
Translates to: ASNPLNTNSNRV*RLSGLGEVTKI
Trigger: TATCTTTGTTACCTCCCCAAGCCCTGATAACCTCCATACTCTGTTTGAATTTGTATTTAAAGGATTTGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1
CDS CAA 72 bp CTGTGTTCTCGAAATACATTCACTCTGATCACTGCTTaGTTAAATTCAGGATTTAGAGACTGGATAATCTCA +
Preference number: 6 (lower is better)
Translates to: LCSRNTFTLITA*LNSGFRDWIIS
Trigger: TGAGATTATCCAGTCTCTAAATCCTGAATTTAACAAAGCAGTGATCAGAGTGAATGTATTTCGAGAACACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257829.8
ENST00000531159.6
ENST00000615292.1