RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAPB (Homo sapiens)

Ensembl gene IDs: ENSG00000125814

Ensembl transcript IDs: ENST00000377026.4, ENST00000398425.7, ENST00000432543.6, ENST00000468128.5, ENST00000472855.5, ENST00000487502.1, ENST00000617876.4

Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTaGTGTGGATCCTCTACAGTCTGTCCTTGGCTGGCCCTTCCCACT +
Preference number: 1 (lower is better)
Translates to: ACHHHNYSLQVLVAT*CGSSTVCPWLALPT
Trigger: AGTGGGAAGGGCCAGCCAAGGACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CCA 90 bp CACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTaGCCACCTGATGTGGATCCTCTACAGTCTGTCCTTGGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: HLMHVTTITIACKSS*PPDVDPLQSVLGWP
Trigger: GGGCCAGCCAAGGACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR GCA 90 bp GCTCTACCAGCCCACCTCATGCATGTCACCACCATAACTATAGCCTaGAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTC +
Preference number: 1 (lower is better)
Translates to: ALPAHLMHVTTITIA*KSSWPPDVDPLQSV
Trigger: GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCTGGTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR GCA 90 bp GCTCTTGGTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATaGTGTGCTGCCAAGTCCTCCAAAGGAAGTCACAAAGGTTTGCAT +
Preference number: 1 (lower is better)
Translates to: ALGHSSYHSRQVTGA*CAAKSSKGSHKGLH
Trigger: ATGCAAACCTTTGTGACTTCCTTTGGAGGACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGACCAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR GCA 90 bp GTAGATTTATTGTTACACATGGTTAGTTTTCATAACGTAATCCCCTaGCCCAGAGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: VDLLLHMVSFHNVIP*PRATQDSMEQEACS
Trigger: AGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCTCTGGGGCAGGGGATTACGTTATGAAAACTAACCATGTGTAACAATAAATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 90 bp GAAACAATAAATGCACAAGGGCTGGTGCATATACTTTGGTTACAGTaGCGCCACCACACACGGTCACGACTGTGCAAAAATACTGCTTTC +
Preference number: 1 (lower is better)
Translates to: ETINAQGLVHILWLQ*RHHTRSRLCKNTAF
Trigger: GAAAGCAGTATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTTGTGCATTTATTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CCA 90 bp GACCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAGTTGAGAGCCACCAAAAATGAAAAC +
Preference number: 1 (lower is better)
Translates to: DLLIISQTTCSRPLA*KHYQFQLRATKNEN
Trigger: GTTTTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 90 bp CTGGGGGTTCTGATAAGCATGAAACAACCCATCATTACCACAAGATaGACAGGAGCCTCTCCTTCATTCATTTCACAGCAACACAGACTT +
Preference number: 1 (lower is better)
Translates to: LGVLISMKQPIITTR*TGASPSFISQQHRL
Trigger: AAGTCTGTGTTGCTGTGAAATGAATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTTATCAGAACCCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR GCA 90 bp ACAGACTTGGCGAGCTTAAACAATACACAGGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTAAATAGGCATCCCATAAAGATCACT +
Preference number: 1 (lower is better)
Translates to: TDLASLNNTQAVWLI*NKIKPLNRHPIKIT
Trigger: AGTGATCTTTATGGGATGCCTATTTAATGGCTTAATTTTGTTGCATATGAGCCAGACGGCCTGTGTATTGTTTAAGCTCGCCAAGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 90 bp ATAAAAACACGTGGCAACATTAAACATAGGCTCCACAAATACCAATaGAATATGAGGAATGAGATTCTGAAGTACTTCTCAGAAAACGCT +
Preference number: 1 (lower is better)
Translates to: IKTRGNIKHRLHKYQ*NMRNEILKYFSENA
Trigger: AGCGTTTTCTGAGAAGTACTTCAGAATCTCATTCCTCATATTTCATTGGTATTTGTGGAGCCTATGTTTAATGTTGCCACGTGTTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTCCAGAGGACTCAAGCTaGAGAACCACTCCTCACACC +
Preference number: 2 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSPEDSS*RTTPHT
Trigger: GGTGTGAGGAGTGGTTCTGCAGCTTGAGTCCTCTGG...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCGTCCTCGTGGCCACCTaGTGTGGATCCTCTACAGTC +
Preference number: 2 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTVLVAT*CGSSTV
Trigger: GACTGTAGAGGATCCACATCAGGTGGCCACGAGGAC...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTCTACAGTCTGTCCTTaGCTGGCCCTTCCCACTTCC +
Preference number: 2 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDSTVCP*LALPTS
Trigger: GGAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGA...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTCCCTTCCTCACAATGTaGTGCCTACAGACCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCPFLTM*CLQTLA
Trigger: AGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGG...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCGTTACCTGTCATCAGTaGAGCTCCGTGATGTCAGAG +
Preference number: 2 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVVTCHQ*SSVMSE
Trigger: CTCTGACATCACGGAGCTTCACTGATGACAGGTAAC...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATTTCTCAAACAACCTaGAGTCGACCCTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVISQTT*SRPLAW
Trigger: CCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTACTACCAATTCCAGTTaGGAGCCACCAAAAATGAAA +
Preference number: 2 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSTTNSS*EPPKMK
Trigger: TTTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATACAAGTTGGGGTTCTTaGCCACTTGGGCATACAGGA +
Preference number: 2 (lower is better)
Translates to: HVTTITIACKSSWPPDVDTSWGS*PLGHTG
Trigger: TCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGT...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 2 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSNTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAG +
Preference number: 2 (lower is better)
Translates to: HVTTITIACKSSWPPDVDSRPLA*KHYQFQ
Trigger: CTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACT...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 90 bp CAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTaGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCACCCC +
Preference number: 2 (lower is better)
Translates to: QLREQSSPLRNKLGF*PTWAYRTFLYHIHP
Trigger: GGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAATCAGTGAAGCTCCGTaGTGTCAGAGTGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLISEAP*CQSVCW
Trigger: CCAGCAGACACTCTGACATCACGGAGCTTCACTGAT...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTGAGAGCCACCAAAAATaGAAACATCATTCCAATACT +
Preference number: 2 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSESHQK*KHHSNT
Trigger: AGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTC...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTG +
Preference number: 2 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLGFLPT*AYRTFL
Trigger: CAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCC...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTG +
Preference number: 2 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKGFLPT*AYRTFL
Trigger: CAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCC...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAGCCTGCAAGTCCTCGTaGCCACCTGATGTGGATCCT +
Preference number: 2 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIACKSS*PPDVDP
Trigger: AGGATCCACATCAGGTGGCCACGAGGACTTGCAGGC...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAACAAGTTGGGGTTCTTaGCCACTTGGGCATACAGGA +
Preference number: 2 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKTSWGS*PLGHTG
Trigger: TCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAACCATAACTATAGCCTaGAAGTCCTCGTGGCCACCT +
Preference number: 2 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKTITIA*KSSWPP
Trigger: AGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATCTATGAGAACAACTaGGCTGAGTACTCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVIYENN*AEYSSP
Trigger: TGGACTTGAGTACTCAGCCCAGTTGTTCTCATAGAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 90 bp GATGAACAGGAGCCTCTCCTTCATTCATTTCACAGCAACACAGACTaGGCGAGCTTAAACAATACACAGGCCGTCTGGCTCATATGCAAC +
Preference number: 2 (lower is better)
Translates to: DEQEPLLHSFHSNTD*ASLNNTQAVWLICN
Trigger: GTTGCATATGAGCCAGACGGCCTGTGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTGAAATGAATGAAGGAGAGGCTCCTGTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCAC +
Preference number: 2 (lower is better)
Translates to: IFHQLREQSSPLRNK*GFLPTWAYRTFLYH
Trigger: GTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACACTACCAATTCCAGTTaGGAGCCACCAAAAATGAAA +
Preference number: 2 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDTTNSS*EPPKMK
Trigger: TTTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCGAGGAGTTAGCTGCATaGCACAAAGACAAAAACATT +
Preference number: 2 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVEELAA*HKDKNI
Trigger: AATGTTTTTGTCTTTGTGGCATGCAGCTAACTCCTC...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 2 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTNTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCTTCAGACGGGTCTGTTaGAGTATAATGATGAAAGCT +
Preference number: 2 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTFRRVC*SIMMKA
Trigger: AGCTTTCATCATTATACTCCAACAGACCCGTCTGAA...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTTCAGACGGGTCTGTTaGAGTATAATGATGAAAGCT +
Preference number: 2 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDFRRVC*SIMMKA
Trigger: AGCTTTCATCATTATACTCCAACAGACCCGTCTGAA...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACACTCATCCATACATaGAGCAAGTACTTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRTLIHT*SKYFQK
Trigger: TTTCTGGAAGTACTTGCTTCATGTATGGATGAGTGT...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCTACTTACTACTACCTaGCATAACATAGGAAGTTTC +
Preference number: 2 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTLLTTT*HNIGSF
Trigger: GAAACTTCCTATGTTATGTCAGGTAGTAGTAAGTAG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCGAGAGCCACCAAAAATaGAAACATCATTCCAATACT +
Preference number: 2 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTESHQK*KHHSNT
Trigger: AGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTC...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGGAGGAGTTAGCTGCATaGCACAAAGACAAAAACATT +
Preference number: 2 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYREELAA*HKDKNI
Trigger: AATGTTTTTGTCTTTGTGGCATGCAGCTAACTCCTC...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAACAAGTTGGGGTTCTTaGCCACTTGGGCATACAGGA +
Preference number: 2 (lower is better)
Translates to: IYFGYSDATTHGHDCAKITSWGS*PLGHTG
Trigger: TCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGT...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAG +
Preference number: 2 (lower is better)
Translates to: IYFGYSDATTHGHDCAKISRPLA*KHYQFQ
Trigger: CTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACT...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTAACAATCAAGTCCCCTaGGAAACAAGTTGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSNNQVP*ETSWGS
Trigger: AGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTT...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCTACTTACTACTACCTaGCATAACATAGGAAGTTTC +
Preference number: 2 (lower is better)
Translates to: HVTTITIACKSSWPPDVDLLTTT*HNIGSF
Trigger: GAAACTTCCTATGTTATGTCAGGTAGTAGTAAGTAG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATGAGAGCCACCAAAAATaGAAACATCATTCCAATACT +
Preference number: 2 (lower is better)
Translates to: HVTTITIACKSSWPPDVDESHQK*KHHSNT
Trigger: AGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTC...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTA +
Preference number: 2 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCAVWLI*NKIKPL
Trigger: TAATGGCTTAATTTTGTTGCATATGAGCCAGACGGC...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 2 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCNTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACGTGGCCACCTGATGTaGATCCTCTACAGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTRGHLM*ILYSLS
Trigger: GGACAGACTGTAGAGGATCCACATCAGGTGGCCACG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACATCACAGAGCTTCCTaGTCTACCAGCCCACCTCAT +
Preference number: 2 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTHHRAS*STSPPH
Trigger: ATGAGGTGGGCTGGTAGAGCAGGAAGCTCTGTGATG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 2 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVNTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACCTGCAGTCGACCCTTaGCCTGGAAACACTACCAAT +
Preference number: 2 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTPAVDP*PGNTTN
Trigger: ATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATCACAAAAGTGCATTTaGCTGGTTGTAGGATATATT +
Preference number: 2 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKSQKCI*LVVGYI
Trigger: AATATATCCTACAACCAGCCAAATGCACTTTTGTGA...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAGAGAGCCACCAAAAATaGAAACATCATTCCAATACT +
Preference number: 2 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIESHQK*KHHSNT
Trigger: AGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTC...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAATTTCTCAAACAACCTaGAGTCGACCCTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTISQTT*SRPLAW
Trigger: CCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAAT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAGGATATATTATTAGGTaGGGAAACAAAACCCCACTT +
Preference number: 2 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIGYIIR*GNKTPL
Trigger: AAGTGGGGTTTTGTTTCCCCACCTAATAATATATCC...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATATCACAAAAGTGCATTTaGCTGGTTGTAGGATATATT +
Preference number: 2 (lower is better)
Translates to: IYFGYSDATTHGHDCAKISQKCI*LVVGYI
Trigger: AATATATCCTACAACCAGCCAAATGCACTTTTGTGA...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAACACTCATCCATACATaGAGCAAGTACTTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: YSEDIQETSVCLKYNISITLIHT*SKYFQK
Trigger: TTTCTGGAAGTACTTGCTTCATGTATGGATGAGTGT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAGAGGAGTTAGCTGCATaGCACAAAGACAAAAACATT +
Preference number: 2 (lower is better)
Translates to: YSEDIQETSVCLKYNISIEELAA*HKDKNI
Trigger: AATGTTTTTGTCTTTGTGGCATGCAGCTAACTCCTC...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR GCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTA +
Preference number: 2 (lower is better)
Translates to: YSEDIQETSVCLKYNISIAVWLI*NKIKPL
Trigger: TAATGGCTTAATTTTGTTGCATATGAGCCAGACGGC...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTGACAGAGTGTCTTCATaGCCACCCCCAGTAGTGGGG +
Preference number: 3 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSDRVSS*PPPVVG
Trigger: CCCCACTACTGGGGGTGGCAATGAAGACACTCTGTC...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTGGGGTTCTTGCCCACTaGGGCATACAGGACATTCCT +
Preference number: 3 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSGVLAH*GIQDIP
Trigger: AGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCC...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGG +
Preference number: 3 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAPLRNK*GFLPTW
Trigger: CCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCTCTACAGTCTGTCCTaGGCTGGCCCTTCCCACTTC +
Preference number: 3 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTLYSLS*AGPSHF
Trigger: GAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGAG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCGACAGAGTGTCTTCATaGCCACCCCCAGTAGTGGGG +
Preference number: 3 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTDRVSS*PPPVVG
Trigger: CCCCACTACTGGGGGTGGCAATGAAGACACTCTGTC...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 72 bp CACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTaGTGTGGATCCTCTACAGTCTGTCCTTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: HHNYSLQVLVAT*CGSSTVCPWLA
Trigger: GGCCAGCCAAGGACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR GCA 72 bp CATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATaGTGTGCTGCCAAGTCCTCCAAAGGAAGTCACAAA +
Preference number: 3 (lower is better)
Translates to: HSSYHSRQVTGA*CAAKSSKGSHK
Trigger: TTTGTGACTTCCTTTGGAGGACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCACCTGCAGTCGACCCTaGGCCTGGAAACACTACCAA +
Preference number: 3 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTTCSRP*AWKHYQ
Trigger: TTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACACCTGCAGTCGACCCTaGGCCTGGAAACACTACCAA +
Preference number: 3 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDTCSRP*AWKHYQ
Trigger: TTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCTCTACAGTCTGTCCTaGGCTGGCCCTTCCCACTTC +
Preference number: 3 (lower is better)
Translates to: HVTTITIACKSSWPPDVDLYSLS*AGPSHF
Trigger: GAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGAG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR GCA 72 bp GCCCACCTCATGCATGTCACCACCATAACTATAGCCTaGAAGTCCTCGTGGCCACCTGATGTGGATCCTCTA +
Preference number: 3 (lower is better)
Translates to: AHLMHVTTITIA*KSSWPPDVDPL
Trigger: TAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CCA 72 bp AGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTGTACCACATTCACCCC +
Preference number: 3 (lower is better)
Translates to: SPLRNKLGFLPT*AYRTFLYHIHP
Trigger: GGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAACCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGG +
Preference number: 3 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKPLRNK*GFLPTW
Trigger: CCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGG...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CCA 72 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTaGCCACCTGATGTGGATCCTCTACAGTCTGTCCTT +
Preference number: 3 (lower is better)
Translates to: HVTTITIACKSS*PPDVDPLQSVL
Trigger: AAGGACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCTTCAGACGGGTCTGTaGGAGTATAATGATGAAAGC +
Preference number: 3 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTLQTGL*EYNDES
Trigger: GCTTTCATCATTATACTCCAACAGACCCGTCTGAAG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCACAGCAACACAGACTaGGCGAGCTTAAACAATACA +
Preference number: 3 (lower is better)
Translates to: HVTTITIACKSSWPPDVDHSNTD*ASLNNT
Trigger: TGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAGGGGTTCTTGCCCACTaGGGCATACAGGACATTCCT +
Preference number: 3 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIGVLAH*GIQDIP
Trigger: AGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCC...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACCACTACCAATTCCAGTaGAGAGCCACCAAAAATGAA +
Preference number: 3 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDHYQFQ*RATKNE
Trigger: TTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTG...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAACCTGCAGTCGACCCTaGGCCTGGAAACACTACCAA +
Preference number: 3 (lower is better)
Translates to: IYFGYSDATTHGHDCAKITCSRP*AWKHYQ
Trigger: TTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGT...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 72 bp AATGCACAAGGGCTGGTGCATATACTTTGGTTACAGTaGCGCCACCACACACGGTCACGACTGTGCAAAAAT +
Preference number: 3 (lower is better)
Translates to: NAQGLVHILWLQ*RHHTRSRLCKN
Trigger: ATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTTGTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTCACAGCAACACAGACTaGGCGAGCTTAAACAATACA +
Preference number: 3 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCHSNTD*ASLNNT
Trigger: TGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTG...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAACTTCAGACGGGTCTGTaGGAGTATAATGATGAAAGC +
Preference number: 3 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKLQTGL*EYNDES
Trigger: GCTTTCATCATTATACTCCAACAGACCCGTCTGAAG...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CCA 72 bp ATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAGTTGAGAGCCACCAAA +
Preference number: 3 (lower is better)
Translates to: IISQTTCSRPLA*KHYQFQLRATK
Trigger: TTTGGTGGCTCTCAACTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATTAAAGGAAGTAAGTTaGCACACCACTAACTGGGCT +
Preference number: 3 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKLKEVS*HTTNWA
Trigger: AGCCCAGTTAGTGGTGTGCAAACTTACTTCCTTTAA...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTCACAGCAACACAGACTaGGCGAGCTTAAACAATACA +
Preference number: 3 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFHSNTD*ASLNNT
Trigger: TGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTG...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGG +
Preference number: 3 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTPLRNK*GFLPTW
Trigger: CCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAAACAAGTTGGGGTTCTaGCCCACTTGGGCATACAGG +
Preference number: 3 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTNKLGF*PTWAYR
Trigger: CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 72 bp GTACAAATCAAATTCACTTTGACACTCATCCATACATaGAGCAAGTACTTCCAGAAAGCTCCCTTCCTCACA +
Preference number: 3 (lower is better)
Translates to: VQIKFTLTLIHT*SKYFQKAPFLT
Trigger: TGTGAGGAAGGGAGCTTTCTGGAAGTACTTGCTTCATGTATGGATGAGTGTCAAAGTGAATTTGATTTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACTTCAGACGGGTCTGTaGGAGTATAATGATGAAAGC +
Preference number: 3 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTLQTGL*EYNDES
Trigger: GCTTTCATCATTATACTCCAACAGACCCGTCTGAAG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR TCA 72 bp GAAACACTACCAATTCCAGTTGAGAGCCACCAAAAATaGAAACATCATTCCAATACTACTTACTACTACCTG +
Preference number: 3 (lower is better)
Translates to: ETLPIPVESHQK*KHHSNTTYYYL
Trigger: CAGGTAGTAGTAAGTAGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACATTCACAAAAGTGCATTaGGCTGGTTGTAGGATATAT +
Preference number: 3 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTFTKVH*AGCRIY
Trigger: ATATATCCTACAACCAGCCAAATGCACTTTTGTGAA...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCAGGAGTGGGAGGCCTTaGCTCGCTTCTCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVARSGRP*LASRPP
Trigger: CGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCT...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCAGGAGTGGGAGGCCTTaGCTCGCTTCTCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTRSGRP*LASRPP
Trigger: CGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCCGCCATCAGCTGTACTaGCTCACGCTCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVRHQLY*LTLLPR
Trigger: GCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCG...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCCAGGTCACGGGGGCATaGTGTGCTGCCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVQVTGA*CAAKSS
Trigger: GGAGGACTTGGCAGCACAGCATGCCCCCGTGACCTG...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTCGTGGCCACCTGATGTaGATCCTCTACAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSRGHLM*ILYSLS
Trigger: GGACAGACTGTAGAGGATCCACATCAGGTGGCCACG...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCGCCATCAGCTGTACTaGCTCACGCTCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRRHQLY*LTLLPR
Trigger: GCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCGGGGGCATGCTGTGCTaGCAAGTCCTCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAGGMLC*QVLQRK
Trigger: CTTCCTTTGGAGGACTTGGCAGCACAGCATGCCCCC...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCACGGGGGCATGCTGTaGTGCCAAGTCCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTHGGML*CQVLQR
Trigger: CCTTTGGAGGACTTGGCAGCACAGCATGCCCCCGTG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCAGGTCACGGGGGCATaGTGTGCTGCCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRQVTGA*CAAKSS
Trigger: GGAGGACTTGGCAGCACAGCATGCCCCCGTGACCTG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCCTCGGAGGAAGGAGTaGGAGGCCTTGACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTPRRKE*EALTRF
Trigger: GAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTTGCGAAGCAACATGGTaGTCAGCCACTGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSCEATW*SATDPS
Trigger: GCTTGGATCAGTGGCTGACCACCATGTTGCTTCGCA...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTTCAACTCGTCTACTATaGAGTGGCAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSSTRLL*SGRGQL
Trigger: AAGCTGCCCTCTGCCACTTCATAGTAGACGAGTTGA...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTGTTACCTGTCATCAGTaGAGCTCCGTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSVTCHQ*SSVMSE
Trigger: CTCTGACATCACGGAGCTTCACTGATGACAGGTAAC...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTACCATAACTATAGCCTaGAAGTCCTCGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSTITIA*KSSWPP
Trigger: AGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCACAGGTCACGGGGGCATaGTGTGCTGCCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSQVTGA*CAAKSS
Trigger: GGAGGACTTGGCAGCACAGCATGCCCCCGTGACCTG...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCCTCGGAGGAAGGAGTaGGAGGCCTTGACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRPRRKE*EALTRF
Trigger: GAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCTGGTACTGCTCAAGCTaGGCAGCATATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAWYCSS*AAYAAT
Trigger: GGTGGCAGCATATGCTGCCCAGCTTGAGCAGTACCA...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCTCTACAGTCTGTCCTTaGCTGGCCCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVASTVCP*LALPTS
Trigger: GGAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGA...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCTGGAGCTTGGCTGCCTaGCAAAATGCGTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAWSLAA*QNAFPA
Trigger: TGCAGGAAACGCATTTTGTCAGGCAGCCAAGCTCCA...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCCCTTCCTCACAATGTaGTGCCTACAGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTPFLTM*CLQTLA
Trigger: AGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCATCAGTGAAGCTCCGTaGTGTCAGAGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAISEAP*CQSVCW
Trigger: CCAGCAGACACTCTGACATCACGGAGCTTCACTGAT...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACCCAGAGGACTCAAGCTaGAGAACCACTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDPEDSS*RTTPHT
Trigger: GGTGTGAGGAGTGGTTCTGCAGCTTGAGTCCTCTGG...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCACCTCGGAGGAAGGAGTaGGAGGCCTTGACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSPRRKE*EALTRF
Trigger: GAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGG...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTG +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAGFLPT*AYRTFL
Trigger: CAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCC...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCCGTGGCCACCTGATGTaGATCCTCTACAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVRGHLM*ILYSLS
Trigger: GGACAGACTGTAGAGGATCCACATCAGGTGGCCACG...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCATGTGGAGCTTGGCTaGCTGACAAAATGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAHVELG*LTKCVS
Trigger: GGAAACGCATTTTGTCAGGCAGCCAAGCTCCACATG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR GCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTAGCCTCTTGGGGATCTaGCTTTTTGTAAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSSLLGI*LFVSIS
Trigger: GGAAATGCTTACAAAAAGGCAGATCCCCAAGAGGCT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000617876.4
CDS-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCAAGCTGGGCAGCATATaGTGCCACCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVKLGSI*CHLQQT
Trigger: TGTCTGCTGAAGGTGGCAGCATATGCTGCCCAGCTT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCAAGCTGGGCAGCATATaGTGCCACCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTKLGSI*CHLQQT
Trigger: TGTCTGCTGAAGGTGGCAGCATATGCTGCCCAGCTT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCATTTCTCAAACAACCTaGAGTCGACCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAISQTT*SRPLAW
Trigger: CCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAAT...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTG +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDGFLPT*AYRTFL
Trigger: CAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCC...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACCCTGCAGTCGACCCTTaGCCTGGAAACACTACCAAT +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDPAVDP*PGNTTN
Trigger: ATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGG...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCCTGCAGTCGACCCTTaGCCTGGAAACACTACCAAT +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTPAVDP*PGNTTN
Trigger: ATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTAGGAGTGGGAGGCCTTaGCTCGCTTCTCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIRSGRP*LASRPP
Trigger: CGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCGGCAGAGGGCAGCTTTaGAGAAGTAATCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTGRGQL*RSNPLH
Trigger: GTGCAAAGGATTACTTCTTCAAAGCTGCCCTCTGCC...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCTCAACTCGTCTACTATaGAGTGGCAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTSTRLL*SGRGQL
Trigger: AAGCTGCCCTCTGCCACTTCATAGTAGACGAGTTGA...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACATGGTGGTCAGCCACTaGTCCAAGCGAGATATTGAG +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDMVVSH*SKRDIE
Trigger: CTCAATATCTCGCTTGGATCAGTGGCTGACCACCAT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATGGTGGTCAGCCACTaGTCCAAGCGAGATATTGAG +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVMVVSH*SKRDIE
Trigger: CTCAATATCTCGCTTGGATCAGTGGCTGACCACCAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATATCAGTGAAGCTCCGTaGTGTCAGAGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDISEAP*CQSVCW
Trigger: CCAGCAGACACTCTGACATCACGGAGCTTCACTGAT...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTGATTCTAAGAGGGAGTaGAAAAGTACCAACTGGACT +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSDSKRE*KSTNWT
Trigger: AGTCCAGTTGGTACTTTTTCACTCCCTCTTAGAATC...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCATACTTTGGTTACAGTaGCGCCACCACACACGGTCA +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTILWLQ*RHHTRS
Trigger: TGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTAT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATACGCCATCAGCTGTACTaGCTCACGCTCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIRHQLY*LTLLPR
Trigger: GCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCG...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACATTTCTCAAACAACCTaGAGTCGACCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDISQTT*SRPLAW
Trigger: CCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAAT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCATCACAGAGCTTCCTaGTCTACCAGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRHHRAS*STSPPH
Trigger: ATGAGGTGGGCTGGTAGAGCAGGAAGCTCTGTGATG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCACCAGAGGACTCAAGCTaGAGAACCACTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSPEDSS*RTTPHT
Trigger: GGTGTGAGGAGTGGTTCTGCAGCTTGAGTCCTCTGG...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTATGCACAAGGGCTGGTaGATATACTTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSMHKGW*IYFGYS
Trigger: ACTGTAACCAAAGTATATGCACCAGCCCTTGTGCAT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCAGGTCACGGGGGCATaGTGTGCTGCCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVQVTGA*CAAKSS
Trigger: GGAGGACTTGGCAGCACAGCATGCCCCCGTGACCTG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCATAACGTAATCCCCTaGCCCAGAGCAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDHNVIP*PRATQD
Trigger: GTCCTGAGTTGCTCTGGGGCAGGGGATTACGTTATG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATTGCGAAGCAACATGGTaGTCAGCCACTGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDCEATW*SATDPS
Trigger: GCTTGGATCAGTGGCTGACCACCATGTTGCTTCGCA...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCCTTCTCCATCCCCTTaGATGGACTTTTTGATGCGA +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAPSPSP*MDFLMR
Trigger: TCGCATCAAAAAGTCCATCCAAGGGGATGGAGAAGG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTG +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRGFLPT*AYRTFL
Trigger: CAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCC...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCAACTCAGGACTCCATaGAGCAGGAAGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDQLRTP*SRKPAL
Trigger: AAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGATGGTGGTCAGCCACTaGTCCAAGCGAGATATTGAG +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRMVVSH*SKRDIE
Trigger: CTCAATATCTCGCTTGGATCAGTGGCTGACCACCAT...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGGTTACCTGTCATCAGTaGAGCTCCGTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRVTCHQ*SSVMSE
Trigger: CTCTGACATCACGGAGCTTCACTGATGACAGGTAAC...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGATACTTTGGTTACAGTaGCGCCACCACACACGGTCA +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRILWLQ*RHHTRS
Trigger: TGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTAT...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTCGCCATCAGCTGTACTaGCTCACGCTCCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIRHQLY*LTLLPR
Trigger: GCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCG...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCATGTGGAGCTTGGCTaGCTGACAAAATGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDHVELG*LTKCVS
Trigger: GGAAACGCATTTTGTCAGGCAGCCAAGCTCCACATG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCACGGGGGCATGCTGTaGTGCCAAGTCCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVHGGML*CQVLQR
Trigger: CCTTTGGAGGACTTGGCAGCACAGCATGCCCCCGTG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCTTCCCTTGGGGATCTaGCTTTTTGTAAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVALPLGI*LFVSIS
Trigger: GGAAATGCTTACAAAAAGGCAGATCCCCAAGGGAAG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398425.7
CDS-3UTR CCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTATGGTACTGCTCAAGCTaGGCAGCATATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLWYCSS*AAYAAT
Trigger: GGTGGCAGCATATGCTGCCCAGCTTGAGCAGTACCA...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACATCTCAATGGCTTTCTaGTACTGCTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDISMAF*YCSSWA
Trigger: TGCCCAGCTTGAGCAGTACCAGAAAGCCATTGAGAT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACCCTTCTCCATCCCCTTaGATGGACTTTTTGATGCGA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDPSPSP*MDFLMR
Trigger: TCGCATCAAAAAGTCCATCCAAGGGGATGGAGAAGG...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTCAGAGTGTCTGCTaGGTTAAGTCTGGCAACACA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDCQSVC*VKSGNT
Trigger: TGTGTTGCCAGACTTAACCCAGCAGACACTCTGACA...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATCTACAGTCTGTCCTTaGCTGGCCCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKSTVCP*LALPTS
Trigger: GGAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGA...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTGCCTGCAAGTCCTCGTaGCCACCTGATGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSACKSS*PPDVDP
Trigger: AGGATCCACATCAGGTGGCCACGAGGACTTGCAGGC...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTCAACTCAGGACTCCATaGAGCAGGAAGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCQLRTP*SRKPAL
Trigger: AAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTG...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 72 bp AAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTaGGGCATACAGGACATTCCTGTACCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: KSPEKQVGVLAH*GIQDIPVPHSP
Trigger: GGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCATCAACTCGTCTACTATaGAGTGGCAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSSTRLL*SGRGQL
Trigger: AAGCTGCCCTCTGCCACTTCATAGTAGACGAGTTGA...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTCCCTTCCTCACAATGTaGTGCCTACAGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSPFLTM*CLQTLA
Trigger: AGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGG...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACGTCCTCGTGGCCACCTaGTGTGGATCCTCTACAGTC +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYVLVAT*CGSSTV
Trigger: GACTGTAGAGGATCCACATCAGGTGGCCACGAGGAC...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTGTCCTCGTGGCCACCTaGTGTGGATCCTCTACAGTC +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFVLVAT*CGSSTV
Trigger: GACTGTAGAGGATCCACATCAGGTGGCCACGAGGAC...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCACATGTGGAGCTTGGCTaGCTGACAAAATGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSHVELG*LTKCVS
Trigger: GGAAACGCATTTTGTCAGGCAGCCAAGCTCCACATG...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACAGCCTCTTGGGGATCTaGCTTTTTGTAAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDSLLGI*LFVSIS
Trigger: GGAAATGCTTACAAAAAGGCAGATCCCCAAGAGGCT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000617876.4
CDS-3UTR GCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTACAAGTTGGGGTTCTTaGCCACTTGGGCATACAGGA +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCTSWGS*PLGHTG
Trigger: TCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGATCTCAATGGCTTTCTaGTACTGCTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRISMAF*YCSSWA
Trigger: TGCCCAGCTTGAGCAGTACCAGAAAGCCATTGAGAT...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATTGTCAGAGTGTCTGCTaGGTTAAGTCTGGCAACACA +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDCQSVC*VKSGNT
Trigger: TGTGTTGCCAGACTTAACCCAGCAGACACTCTGACA...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCSRPLA*KHYQFQ
Trigger: CTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTTCTACAGTCTGTCCTTaGCTGGCCCTTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSSTVCP*LALPTS
Trigger: GGAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGA...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACGCCTGCAAGTCCTCGTaGCCACCTGATGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYACKSS*PPDVDP
Trigger: AGGATCCACATCAGGTGGCCACGAGGACTTGCAGGC...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTGCCTGCAAGTCCTCGTaGCCACCTGATGTGGATCCT +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFACKSS*PPDVDP
Trigger: AGGATCCACATCAGGTGGCCACGAGGACTTGCAGGC...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 72 bp GAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTaGCCCACTTGGGCATACAGGACATTCCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: EQSSPLRNKLGF*PTWAYRTFLYH
Trigger: GTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATCCAAGCGAGATATTaGGTCAAATTCCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVIQARY*VKFLHC
Trigger: GCAGTGAAGGAATTTGACTCAATATCTCGCTTGGAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACATCCAAGCGAGATATTaGGTCAAATTCCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDIQARY*VKFLHC
Trigger: GCAGTGAAGGAATTTGACTCAATATCTCGCTTGGAT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAATGGTGGTCAGCCACTaGTCCAAGCGAGATATTGAG +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKMVVSH*SKRDIE
Trigger: CTCAATATCTCGCTTGGATCAGTGGCTGACCACCAT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACCCCTTCCTCACAATGTaGTGCCTACAGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYPFLTM*CLQTLA
Trigger: AGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGG...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAGTTACCTGTCATCAGTaGAGCTCCGTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKVTCHQ*SSVMSE
Trigger: CTCTGACATCACGGAGCTTCACTGATGACAGGTAAC...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAATACTTTGGTTACAGTaGCGCCACCACACACGGTCA +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKILWLQ*RHHTRS
Trigger: TGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTAT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCCAGAGGACTCAAGCTaGAGAACCACTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVPEDSS*RTTPHT
Trigger: GGTGTGAGGAGTGGTTCTGCAGCTTGAGTCCTCTGG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTGGGGGCATGCTGTGCTaGCAAGTCCTCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIGGMLC*QVLQRK
Trigger: CTTCCTTTGGAGGACTTGGCAGCACAGCATGCCCCC...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTGCTGCATGTGGAGCTTaGCTGCCTGACAAAATGCGT +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSAACGA*LPDKMR
Trigger: ACGCATTTTGTCAGGCAGCCAAGCTCCACATGCAGC...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR CCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTGGTACTGCTCAAGCTaGGCAGCATATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYWYCSS*AAYAAT
Trigger: GGTGGCAGCATATGCTGCCCAGCTTGAGCAGTACCA...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTCTCAAGAGCAAGCTTaGCATTCAACTCGTCTACTA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDSQEQA*HSTRLL
Trigger: TAGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGA...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTCCTTCTCCATCCCCTTaGATGGACTTTTTGATGCGA +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCPSPSP*MDFLMR
Trigger: TCGCATCAAAAAGTCCATCCAAGGGGATGGAGAAGG...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCATCTATGAGAACAACTaGGCTGAGTACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTIYENN*AEYSSP
Trigger: TGGACTTGAGTACTCAGCCCAGTTGTTCTCATAGAT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCATGTCAGAGTGTCTGCTaGGTTAAGTCTGGCAACACA +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSCQSVC*VKSGNT
Trigger: TGTGTTGCCAGACTTAACCCAGCAGACACTCTGACA...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTCGTGGCCACCTGATGTaGATCCTCTACAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFRGHLM*ILYSLS
Trigger: GGACAGACTGTAGAGGATCCACATCAGGTGGCCACG...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCCGTGGCCACCTGATGTaGATCCTCTACAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFRGHLM*ILYSLS
Trigger: GGACAGACTGTAGAGGATCCACATCAGGTGGCCACG...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 72 bp CAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGGGCATACAGGACATTC +
Preference number: 4 (lower is better)
Translates to: QLREQSSPLRNK*GFLPTWAYRTF
Trigger: GAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTGGAGCTTGGCTGCCTaGCAAAATGCGTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFWSLAA*QNAFPA
Trigger: TGCAGGAAACGCATTTTGTCAGGCAGCCAAGCTCCA...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR TCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCATCAGTGAAGCTCCGTaGTGTCAGAGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVISEAP*CQSVCW
Trigger: CCAGCAGACACTCTGACATCACGGAGCTTCACTGAT...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACATCAGTGAAGCTCCGTaGTGTCAGAGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYISEAP*CQSVCW
Trigger: CCAGCAGACACTCTGACATCACGGAGCTTCACTGAT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTGTTACCTGTCATCAGTaGAGCTCCGTGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSVTCHQ*SSVMSE
Trigger: CTCTGACATCACGGAGCTTCACTGATGACAGGTAAC...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCTACTTACTACTACCTaGCATAACATAGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVALLTTT*HNIGSF
Trigger: GAAACTTCCTATGTTATGTCAGGTAGTAGTAAGTAG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCAAGCTGGGCAGCATATaGTGCCACCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFKLGSI*CHLQQT
Trigger: TGTCTGCTGAAGGTGGCAGCATATGCTGCCCAGCTT...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTAAGCTGGGCAGCATATaGTGCCACCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFKLGSI*CHLQQT
Trigger: TGTCTGCTGAAGGTGGCAGCATATGCTGCCCAGCTT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAATGGCTTTCTGGTACTaGTCAAGCTGGGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKMAFWY*SSWAAY
Trigger: ATATGCTGCCCAGCTTGAGCAGTACCAGAAAGCCAT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATTATCCATTGTGTTTaGCCCAACCTGCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVIIHCV*PNLLID
Trigger: ATCTATGAGCAGGTTGGGGCAAACACAATGGATAAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCGTCAAATTCCTTCACTaGTTCAGTGTAAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVVKFLH*FSVSFT
Trigger: AGTGAAGCTTACACTGAAGCAGTGAAGGAATTTGAC...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACGAGGAGTTAGCTGCATaGCACAAAGACAAAAACATT +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDEELAA*HKDKNI
Trigger: AATGTTTTTGTCTTTGTGGCATGCAGCTAACTCCTC...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTA +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTAVWLI*NKIKPL
Trigger: TAATGGCTTAATTTTGTTGCATATGAGCCAGACGGC...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDAVWLI*NKIKPL
Trigger: TAATGGCTTAATTTTGTTGCATATGAGCCAGACGGC...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATACATCACAGAGCTTCCTaGTCTACCAGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIHHRAS*STSPPH
Trigger: ATGAGGTGGGCTGGTAGAGCAGGAAGCTCTGTGATG...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCATCACAGAGCTTCCTaGTCTACCAGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVHHRAS*STSPPH
Trigger: ATGAGGTGGGCTGGTAGAGCAGGAAGCTCTGTGATG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCACACGGTCACGACTGTaGAAAAATACTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTTRSRL*KNTAFK
Trigger: TTTGAAAGCAGTATTTTTGCACAGTCGTGACCGTGT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACACACGGTCACGACTGTaGAAAAATACTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDTRSRL*KNTAFK
Trigger: TTTGAAAGCAGTATTTTTGCACAGTCGTGACCGTGT...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCATAACGTAATCCCCTaGCCCAGAGCAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVHNVIP*PRATQD
Trigger: GTCCTGAGTTGCTCTGGGGCAGGGGATTACGTTATG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTGCTGCATGTGGAGCTTaGCTGCCTGACAAAATGCGT +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFAACGA*LPDKMR
Trigger: ACGCATTTTGTCAGGCAGCCAAGCTCCACATGCAGC...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTCTGCAATAGTAATGTaGTGCTTGGCTGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDSAIVM*CLAAIV
Trigger: TACAATTGCAGCCAAGCACCACATTACTATTGCAGA...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCTCTGCAATAGTAATGTaGTGCTTGGCTGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVSAIVM*CLAAIV
Trigger: TACAATTGCAGCCAAGCACCACATTACTATTGCAGA...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTTGGTACTGCTCAAGCTaGGCAGCATATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIWYCSS*AAYAAT
Trigger: GGTGGCAGCATATGCTGCCCAGCTTGAGCAGTACCA...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGTCTCAAGAGCAAGCTTaGCATTCAACTCGTCTACTA +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRSQEQA*HSTRLL
Trigger: TAGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGA...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATATGCGAAGCAACATGGTaGTCAGCCACTGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKICEATW*SATDPS
Trigger: GCTTGGATCAGTGGCTGACCACCATGTTGCTTCGCA...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTGCGAAGCAACATGGTaGTCAGCCACTGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFCEATW*SATDPS
Trigger: GCTTGGATCAGTGGCTGACCACCATGTTGCTTCGCA...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCCTGCAGTCGACCCTTaGCCTGGAAACACTACCAAT +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVPAVDP*PGNTTN
Trigger: ATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTCCTGCAGTCGACCCTTaGCCTGGAAACACTACCAAT +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFPAVDP*PGNTTN
Trigger: ATTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGG...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACCAACTCAGGACTCCATaGAGCAGGAAGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYQLRTP*SRKPAL
Trigger: AAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTG...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATACAACTCAGGACTCCATaGAGCAGGAAGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIQLRTP*SRKPAL
Trigger: AAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTG...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCTCAACTCGTCTACTATaGAGTGGCAGAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVSTRLL*SGRGQL
Trigger: AAGCTGCCCTCTGCCACTTCATAGTAGACGAGTTGA...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATACACTCATCCATACATaGAGCAAGTACTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDTLIHT*SKYFQK
Trigger: TTTCTGGAAGTACTTGCTTCATGTATGGATGAGTGT...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAAACAATCAAGTCCCCTaGGAAACAAGTTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKNNQVP*ETSWGS
Trigger: AGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTGATTCTAAGAGGGAGTaGAAAAGTACCAACTGGACT +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCDSKRE*KSTNWT
Trigger: AGTCCAGTTGGTACTTTTTCACTCCCTCTTAGAATC...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCAGCTCACAGGCATCTTaGAACATGGCACTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFSSQAS*NMALSY
Trigger: GTAGGACAGTGCCATGTTTCAAGATGCCTGTGAGCT...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTAGCTCACAGGCATCTTaGAACATGGCACTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFSSQAS*NMALSY
Trigger: GTAGGACAGTGCCATGTTTCAAGATGCCTGTGAGCT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACAGCTCACAGGCATCTTaGAACATGGCACTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYSSQAS*NMALSY
Trigger: GTAGGACAGTGCCATGTTTCAAGATGCCTGTGAGCT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACAAAATGCGTTTCCTaGAGCACTCCAATTTTTAGC +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRTKCVS*STPIFS
Trigger: GCTAAAAATTGGAGTGCTGCAGGAAACGCATTTTGT...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000398425.7
CDS-3UTR GCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCGAAGAAGTAATCCTTTaGACTGTATTTCAACAAAGG +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAEEVIL*TVFQQR
Trigger: CCTTTGTTGAAATACAGTGCAAAGGATTACTTCTTC...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATGTCAAATTCCTTCACTaGTTCAGTGTAAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDVKFLH*FSVSFT
Trigger: AGTGAAGCTTACACTGAAGCAGTGAAGGAATTTGAC...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACACAAGTTGGGGTTCTTaGCCACTTGGGCATACAGGA +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYTSWGS*PLGHTG
Trigger: TCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAATGCACAAGGGCTGGTaGATATACTTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSMHKGW*IYFGYS
Trigger: ACTGTAACCAAAGTATATGCACCAGCCCTTGTGCAT...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATAGGAGAAACAATAAATaGACAAGGGCTGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: HVTTITIACKSSWPPDVDRRNNK*TRAGAY
Trigger: ATATGCACCAGCCCTTGTGCATTTATTGTTTCTCCT...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTATCTATGAGAACAACTaGGCTGAGTACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCIYENN*AEYSSP
Trigger: TGGACTTGAGTACTCAGCCCAGTTGTTCTCATAGAT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAATCTATGAGAACAACTaGGCTGAGTACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSIYENN*AEYSSP
Trigger: TGGACTTGAGTACTCAGCCCAGTTGTTCTCATAGAT...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTGGGTTCTTGCCCACTTaGGCATACAGGACATTCCTG +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIGFLPT*AYRTFL
Trigger: CAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCC...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFSRPLA*KHYQFQ
Trigger: CTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACGGATATATTATTAGGTaGGGAAACAAAACCCCACTT +
Preference number: 4 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDGYIIR*GNKTPL
Trigger: AAGTGGGGTTTTGTTTCCCCACCTAATAATATATCC...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCTCACAAAAGTGCATTTaGCTGGTTGTAGGATATATT +
Preference number: 4 (lower is better)
Translates to: SPPHACHHHNYSLQVLVASQKCI*LVVGYI
Trigger: AATATATCCTACAACCAGCCAAATGCACTTTTGTGA...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGTTCAGACGGGTCTGTTaGAGTATAATGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRFRRVC*SIMMKA
Trigger: AGCTTTCATCATTATACTCCAACAGACCCGTCTGAA...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAAGGCATCTTGAAACATaGCACTGTCCTACATCCATG +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKRHLET*HCPTSM
Trigger: CATGGATGTAGGACAGTGCCATGTTTCAAGATGCCT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
3UTR CAA 72 bp AGAAACAATAAATGCACAAGGGCTGGTGCATATACTTaGGTTACAGTGACGCCACCACACACGGTCACGACT +
Preference number: 4 (lower is better)
Translates to: RNNKCTRAGAYT*VTVTPPHTVTT
Trigger: AGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTTGTGCATTTATTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATACTTGGATGGACTTTTTaGTGCGAAGCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKILGWTF*CEATWW
Trigger: CCACCATGTTGCTTCGCATCAAAAAGTCCATCCAAG...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTCTTGGATGGACTTTTTaGTGCGAAGCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFLGWTF*CEATWW
Trigger: CCACCATGTTGCTTCGCATCAAAAAGTCCATCCAAG...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCTTGGATGGACTTTTTaGTGCGAAGCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVLGWTF*CEATWW
Trigger: CCACCATGTTGCTTCGCATCAAAAAGTCCATCCAAG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCTACTTACTACTACCTaGCATAACATAGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRLLTTT*HNIGSF
Trigger: GAAACTTCCTATGTTATGTCAGGTAGTAGTAAGTAG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTACTACCAATTCCAGTTaGGAGCCACCAAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCTTNSS*EPPKMK
Trigger: TTTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAGCAATAGTAATGTGGTaGTTGGCTGCAATTGTAAAC +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSAIVMW*LAAIVN
Trigger: GTTTACAATTGCAGCCAAGCACCACATTACTATTGC...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAGGGGGCATGCTGTGCTaGCAAGTCCTCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIGGMLC*QVLQRK
Trigger: CTTCCTTTGGAGGACTTGGCAGCACAGCATGCCCCC...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACACGGGGGCATGCTGTaGTGCCAAGTCCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTHGGML*CQVLQR
Trigger: CCTTTGGAGGACTTGGCAGCACAGCATGCCCCCGTG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATATTTGCAGCTCTaGTATACATTTCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRTYLQL*YTFHKP
Trigger: AGGCTTGTGAAATGTATACCAGAGCTGCAAATATGT...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCATCTCAATGGCTTTCTaGTACTGCTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFISMAF*YCSSWA
Trigger: TGCCCAGCTTGAGCAGTACCAGAAAGCCATTGAGAT...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATCTCAAGAGCAAGCTTaGCATTCAACTCGTCTACTA +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKSQEQA*HSTRLL
Trigger: TAGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGA...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACCCTTCTCCATCCCCTTaGATGGACTTTTTGATGCGA +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYPSPSP*MDFLMR
Trigger: TCGCATCAAAAAGTCCATCCAAGGGGATGGAGAAGG...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCTGTCAGAGTGTCTGCTaGGTTAAGTCTGGCAACACA +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVCQSVC*VKSGNT
Trigger: TGTGTTGCCAGACTTAACCCAGCAGACACTCTGACA...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTAGTCGACCCTTGGCCTaGAAACACTACCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFISRPLA*KHYQFQ
Trigger: CTGGAATTGGTAGTGTTTCCAGGCCAAGGGTCGACT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTAGGCATCTTGAAACATaGCACTGTCCTACATCCATG +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSRHLET*HCPTSM
Trigger: CATGGATGTAGGACAGTGCCATGTTTCAAGATGCCT...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATACCCTTCCTCACAATGTaGTGCCTACAGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIPFLTM*CLQTLA
Trigger: AGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGG...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTAACAATCAAGTCCCCTaGGAAACAAGTTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFNNQVP*ETSWGS
Trigger: AGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCAACAATCAAGTCCCCTaGGAAACAAGTTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFNNQVP*ETSWGS
Trigger: AGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTT...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTTGCGTTTCCTGCAGCTaGAGAAGACACACTCCAATT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFICVSCS*RRHTPI
Trigger: AATTGGAGTGTGTCTTCTTCAGCTGCAGGAAACGCA...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTATGGCTTTCTGGTACTaGTCAAGCTGGGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIMAFWY*SSWAAY
Trigger: ATATGCTGCCCAGCTTGAGCAGTACCAGAAAGCCAT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAATTATCCATTGTGTTTaGCCCAACCTGCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLIIHCV*PNLLID
Trigger: ATCTATGAGCAGGTTGGGGCAAACACAATGGATAAT...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAGAGGAGTTAGCTGCATaGCACAAAGACAAAAACATT +
Preference number: 4 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLEELAA*HKDKNI
Trigger: AATGTTTTTGTCTTTGTGGCATGCAGCTAACTCCTC...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTA +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKAVWLI*NKIKPL
Trigger: TAATGGCTTAATTTTGTTGCATATGAGCCAGACGGC...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATCTGCAATAGTAATGTaGTGCTTGGCTGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKSAIVM*CLAAIV
Trigger: TACAATTGCAGCCAAGCACCACATTACTATTGCAGA...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTATCTCAATGGCTTTCTaGTACTGCTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIISMAF*YCSSWA
Trigger: TGCCCAGCTTGAGCAGTACCAGAAAGCCATTGAGAT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTAGGCATCTTGAAACATaGCACTGTCCTACATCCATG +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFRHLET*HCPTSM
Trigger: CATGGATGTAGGACAGTGCCATGTTTCAAGATGCCT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTAGATTGTTCATAATGTaGAATAGCCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCRLFIM*NSLLNV
Trigger: GACATTGAGAAGGCTATTGCACATTATGAACAATCT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAGAAGAAGTAATCCTTTaGACTGTATTTCAACAAAGG +
Preference number: 4 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSEEVIL*TVFQQR
Trigger: CCTTTGTTGAAATACAGTGCAAAGGATTACTTCTTC...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTGCCGTCTGGCTCATATaGAACAAAATTAAGCCATTA +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSAVWLI*NKIKPL
Trigger: TAATGGCTTAATTTTGTTGCATATGAGCCAGACGGC...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACCAGAGGACTCAAGCTaGAGAACCACTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTPEDSS*RTTPHT
Trigger: GGTGTGAGGAGTGGTTCTGCAGCTTGAGTCCTCTGG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCATGCACAAGGGCTGGTaGATATACTTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVMHKGW*IYFGYS
Trigger: ACTGTAACCAAAGTATATGCACCAGCCCTTGTGCAT...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATACATAACGTAATCCCCTaGCCCAGAGCAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIHNVIP*PRATQD
Trigger: GTCCTGAGTTGCTCTGGGGCAGGGGATTACGTTATG...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAACATATTTGCAGCTCTaGTATACATTTCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLTYLQL*YTFHKP
Trigger: AGGCTTGTGAAATGTATACCAGAGCTGCAAATATGT...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAGCTGCATGTGGAGCTTaGCTGCCTGACAAAATGCGT +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIAACGA*LPDKMR
Trigger: ACGCATTTTGTCAGGCAGCCAAGCTCCACATGCAGC...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTATCTATGAGAACAACTaGGCTGAGTACTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFIYENN*AEYSSP
Trigger: TGGACTTGAGTACTCAGCCCAGTTGTTCTCATAGAT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAGGATATATTATTAGGTaGGGAAACAAAACCCCACTT +
Preference number: 4 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLGYIIR*GNKTPL
Trigger: AAGTGGGGTTTTGTTTCCCCACCTAATAATATATCC...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTTTCAGACGGGTCTGTTaGAGTATAATGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSFRRVC*SIMMKA
Trigger: AGCTTTCATCATTATACTCCAACAGACCCGTCTGAA...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTAGGCATCTTGAAACATaGCACTGTCCTACATCCATG +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIRHLET*HCPTSM
Trigger: CATGGATGTAGGACAGTGCCATGTTTCAAGATGCCT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAGGCAGAGGGCAGCTTTaGAGAAGTAATCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIGRGQL*RSNPLH
Trigger: GTGCAAAGGATTACTTCTTCAAAGCTGCCCTCTGCC...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACACACTCATCCATACATaGAGCAAGTACTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYTLIHT*SKYFQK
Trigger: TTTCTGGAAGTACTTGCTTCATGTATGGATGAGTGT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAACTACCAATTCCAGTTaGGAGCCACCAAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKITTNSS*EPPKMK
Trigger: TTTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGT...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTGATTCTAAGAGGGAGTaGAAAAGTACCAACTGGACT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIDSKRE*KSTNWT
Trigger: AGTCCAGTTGGTACTTTTTCACTCCCTCTTAGAATC...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAAGCTCACAGGCATCTTaGAACATGGCACTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISISSQAS*NMALSY
Trigger: GTAGGACAGTGCCATGTTTCAAGATGCCTGTGAGCT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCACAAAATGCGTTTCCTaGAGCACTCCAATTTTTAGC +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFTKCVS*STPIFS
Trigger: GCTAAAAATTGGAGTGCTGCAGGAAACGCATTTTGT...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000398425.7
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCGCAATAGTAATGTGGTaGTTGGCTGCAATTGTAAAC +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVAIVMW*LAAIVN
Trigger: GTTTACAATTGCAGCCAAGCACCACATTACTATTGC...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTGCAATAGTAATGTGGTaGTTGGCTGCAATTGTAAAC +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFAIVMW*LAAIVN
Trigger: GTTTACAATTGCAGCCAAGCACCACATTACTATTGC...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACGAGGAGTTAGCTGCATaGCACAAAGACAAAAACATT +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYEELAA*HKDKNI
Trigger: AATGTTTTTGTCTTTGTGGCATGCAGCTAACTCCTC...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTACACGGTCACGACTGTaGAAAAATACTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFTRSRL*KNTAFK
Trigger: TTTGAAAGCAGTATTTTTGCACAGTCGTGACCGTGT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTATGCACAAGGGCTGGTaGATATACTTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIMHKGW*IYFGYS
Trigger: ACTGTAACCAAAGTATATGCACCAGCCCTTGTGCAT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACAGGAGAAACAATAAATaGACAAGGGCTGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYRRNNK*TRAGAY
Trigger: ATATGCACCAGCCCTTGTGCATTTATTGTTTCTCCT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACATAACGTAATCCCCTaGCCCAGAGCAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTHNVIP*PRATQD
Trigger: GTCCTGAGTTGCTCTGGGGCAGGGGATTACGTTATG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCTCTGCAATAGTAATGTaGTGCTTGGCTGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVSAIVM*CLAAIV
Trigger: TACAATTGCAGCCAAGCACCACATTACTATTGCAGA...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 4 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFNTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTATCACAAAAGTGCATTTaGCTGGTTGTAGGATATATT +
Preference number: 4 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLSQKCI*LVVGYI
Trigger: AATATATCCTACAACCAGCCAAATGCACTTTTGTGA...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTCAGACGGGTCTGTTaGAGTATAATGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFFRRVC*SIMMKA
Trigger: AGCTTTCATCATTATACTCCAACAGACCCGTCTGAA...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAGGCAGAGGGCAGCTTTaGAGAAGTAATCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTGRGQL*RSNPLH
Trigger: GTGCAAAGGATTACTTCTTCAAAGCTGCCCTCTGCC...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTGCAATAGTAATGTGGTaGTTGGCTGCAATTGTAAAC +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIAIVMW*LAAIVN
Trigger: GTTTACAATTGCAGCCAAGCACCACATTACTATTGC...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAATGGCTTTCTGGTACTaGTCAAGCTGGGCAGCATAT +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIMAFWY*SSWAAY
Trigger: ATATGCTGCCCAGCTTGAGCAGTACCAGAAAGCCAT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTATTATCCATTGTGTTTaGCCCAACCTGCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIIIHCV*PNLLID
Trigger: ATCTATGAGCAGGTTGGGGCAAACACAATGGATAAT...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAACAAGTTGGGGTTCTTaGCCACTTGGGCATACAGGA +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTTSWGS*PLGHTG
Trigger: TCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAACCATAACTATAGCCTaGAAGTCCTCGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTTITIA*KSSWPP
Trigger: AGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCGGATATATTATTAGGTaGGGAAACAAAACCCCACTT +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFGYIIR*GNKTPL
Trigger: AAGTGGGGTTTTGTTTCCCCACCTAATAATATATCC...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAATCATTACCACAAGATaGACAGGAGCCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIIITTR*TGASPS
Trigger: TGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGAT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAAACAATCAAGTCCCCTaGGAAACAAGTTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISINNQVP*ETSWGS
Trigger: AGAACCCCAACTTGTTTCTCAGGGGACTTGATTGTT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTCTACTTACTACTACCTaGCATAACATAGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFILLTTT*HNIGSF
Trigger: GAAACTTCCTATGTTATGTCAGGTAGTAGTAAGTAG...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTGAGAGCCACCAAAAATaGAAACATCATTCCAATACT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIESHQK*KHHSNT
Trigger: AGTATTGGAATGATGTTTTCATTTTTGGTGGCTCTC...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAAGATTGTTCATAATGTaGAATAGCCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIRLFIM*NSLLNV
Trigger: GACATTGAGAAGGCTATTGCACATTATGAACAATCT...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCAGATTGTTCATAATGTaGAATAGCCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVRLFIM*NSLLNV
Trigger: GACATTGAGAAGGCTATTGCACATTATGAACAATCT...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCGAAGAAGTAATCCTTTaGACTGTATTTCAACAAAGG +
Preference number: 4 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFEEVIL*TVFQQR
Trigger: CCTTTGTTGAAATACAGTGCAAAGGATTACTTCTTC...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCTCACAAAAGTGCATTTaGCTGGTTGTAGGATATATT +
Preference number: 4 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVSQKCI*LVVGYI
Trigger: AATATATCCTACAACCAGCCAAATGCACTTTTGTGA...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAATCCAAGCGAGATATTaGGTCAAATTCCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIIQARY*VKFLHC
Trigger: GCAGTGAAGGAATTTGACTCAATATCTCGCTTGGAT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTTCACAAAAGTGCATTTaGCTGGTTGTAGGATATATT +
Preference number: 4 (lower is better)
Translates to: KHETTHHYHKMNRSLSFISQKCI*LVVGYI
Trigger: AATATATCCTACAACCAGCCAAATGCACTTTTGTGA...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR TCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAATCCAAGCGAGATATTaGGTCAAATTCCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTIQARY*VKFLHC
Trigger: GCAGTGAAGGAATTTGACTCAATATCTCGCTTGGAT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAGTCAAATTCCTTCACTaGTTCAGTGTAAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISIVKFLH*FSVSFT
Trigger: AGTGAAGCTTACACTGAAGCAGTGAAGGAATTTGAC...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 4 (lower is better)
Translates to: YSEDIQETSVCLKYNISINTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAATTATCCATTGTGTTTaGCCCAACCTGCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTIIHCV*PNLLID
Trigger: ATCTATGAGCAGGTTGGGGCAAACACAATGGATAAT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAGTCAAATTCCTTCACTaGTTCAGTGTAAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTVKFLH*FSVSFT
Trigger: AGTGAAGCTTACACTGAAGCAGTGAAGGAATTTGAC...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAACACGGTCACGACTGTaGAAAAATACTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTTRSRL*KNTAFK
Trigger: TTTGAAAGCAGTATTTTTGCACAGTCGTGACCGTGT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAAGGAGAAACAATAAATaGACAAGGGCTGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTRRNNK*TRAGAY
Trigger: ATATGCACCAGCCCTTGTGCATTTATTGTTTCTCCT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAAATACACAGGCCGTCTaGCTCATATGCAACAAAATT +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTNTQAV*LICNKI
Trigger: AATTTTGTTGCATATGAGCCAGACGGCCTGTGTATT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACATTCAGACGGGTCTGTTaGAGTATAATGATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTFRRVC*SIMMKA
Trigger: AGCTTTCATCATTATACTCCAACAGACCCGTCTGAA...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACATCTTGAACATATTTaGAGCTCTGGTATACATTTC +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTHLEHI*SSGIHF
Trigger: GAAATGTATACCAGAGCTGCAAATATGTTCAAGATG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR GCA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAAGATTGTTCATAATGTaGAATAGCCTTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTRLFIM*NSLLNV
Trigger: GACATTGAGAAGGCTATTGCACATTATGAACAATCT...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 90 bp GTGGGAGGCCTTGACTCGCTTCTCGGCCTCCGCCATCAGCTGTACTaGCTCACGCTCCTTCCCCGCGTTGTCCATGTCGCCCGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: VGGLDSLLGLRHQLY*LTLLPRVVHVARRG
Trigger: GCCGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCGGAGGCCGAGAAGCGAGTCAAGGCCTCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000487502.1
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACCGCTCCTTCCCCGCGTaGTCCATGTCGCCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDRSFPA*SMSPAA
Trigger: CGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCG...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS TCA 90 bp TTGTGTTTCCTCCAAACAGCCCTCGGAGGAAGGAGTGGGAGGCCTTaGCTCGCTTCTCGGCCTCCGCCATCAGCTGTACTGCCTCACGCT +
Preference number: 5 (lower is better)
Translates to: LCFLQTALGGRSGRP*LASRPPPSAVLPHA
Trigger: AGCGTGAGGCAGTACAGCTGATGGCGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGGGCTGTTTGGAGGAAACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000472855.5
ENST00000487502.1
ENST00000617876.4
CDS-3UTR CAA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTACCTGCAGTCGACCCTaGGCCTGGAAACACTACCAA +
Preference number: 5 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSTCSRP*AWKHYQ
Trigger: TTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGT...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATACGCTCCTTCCCCGCGTaGTCCATGTCGCCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIRSFPA*SMSPAA
Trigger: CGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCG...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACCGCTCCTTCCCCGCGTaGTCCATGTCGCCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYRSFPA*SMSPAA
Trigger: CGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCG...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTCGCTCCTTCCCCGCGTaGTCCATGTCGCCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFRSFPA*SMSPAA
Trigger: CGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCG...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCTCTACAGTCTGTCCTaGGCTGGCCCTTCCCACTTC +
Preference number: 5 (lower is better)
Translates to: SPPHACHHHNYSLQVLVALYSLS*AGPSHF
Trigger: GAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGAG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS CCA 90 bp TCTTCTATTCTTGTGTTTCCTCCAAACAGCCCTCGGAGGAAGGAGTaGGAGGCCTTGACTCGCTTCTCGGCCTCCGCCATCAGCTGTACT +
Preference number: 5 (lower is better)
Translates to: SSILVFPPNSPRRKE*EALTRFSASAISCT
Trigger: AGTACAGCTGATGGCGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGGGCTGTTTGGAGGAAACACAAGAATAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000472855.5
ENST00000487502.1
ENST00000617876.4
CDS-3UTR CAA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTTTCTCAAGAGCAAGCTaGGCATTCAACTCGTCTACT +
Preference number: 5 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSFSRAS*AFNSST
Trigger: AGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGAA...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATGGGGTTCTTGCCCACTaGGGCATACAGGACATTCCT +
Preference number: 5 (lower is better)
Translates to: HVTTITIACKSSWPPDVDGVLAH*GIQDIP
Trigger: AGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCC...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGG +
Preference number: 5 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRPLRNK*GFLPTW
Trigger: CCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAGACAGAGTGTCTTCATaGCCACCCCCAGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSDRVSS*PPPVVG
Trigger: CCCCACTACTGGGGGTGGCAATGAAGACACTCTGTC...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCGCAGTTGATAGCCTCTaGGGGATCTGCCTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAAVDSL*GICLFV
Trigger: TACAAAAAGGCAGATCCCCAAGAGGCTATCAACTGC...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000617876.4
CDS-3UTR CAA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTTTAAAGGAAGTAAGTTaGCACACCACTAACTGGGCT +
Preference number: 5 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSLKEVS*HTTNWA
Trigger: AGCCCAGTTAGTGGTGTGCAAACTTACTTCCTTTAA...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCGCTGGTGCATATACTTaGGTTACAGTGACGCCACCA +
Preference number: 5 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVAGAYT*VTVTPP
Trigger: TGGTGGCGTCACTGTAACCAAAGTATATGCACCAGC...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCGCTGGTGCATATACTTaGGTTACAGTGACGCCACCA +
Preference number: 5 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTAGAYT*VTVTPP
Trigger: TGGTGGCGTCACTGTAACCAAAGTATATGCACCAGC...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGGCAGGAAGCCTGCTCTaGGTCATAGCTCATACCACA +
Preference number: 5 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRAGSLL*VIAHTT
Trigger: TGTGGTATGAGCTATGACCAAGAGCAGGCTTCCTGC...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACGCAGTTGATAGCCTCTaGGGGATCTGCCTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDAVDSL*GICLFV
Trigger: TACAAAAAGGCAGATCCCCAAGAGGCTATCAACTGC...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCACAGCAACACAGACTaGGCGAGCTTAAACAATACA +
Preference number: 5 (lower is better)
Translates to: SPPHACHHHNYSLQVLVAHSNTD*ASLNNT
Trigger: TGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAGGGGTTCTTGCCCACTaGGGCATACAGGACATTCCT +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLGVLAH*GIQDIP
Trigger: AGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCC...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTACCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLPLRNK*GFLPTW
Trigger: CCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGG...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAACCTGCAGTCGACCCTaGGCCTGGAAACACTACCAA +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLTCSRP*AWKHYQ
Trigger: TTGGTAGTGTTTCCAGGCCAAGGGTCGACTGCAGGT...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTCTCTACAGTCTGTCCTaGGCTGGCCCTTCCCACTTC +
Preference number: 5 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSLYSLS*AGPSHF
Trigger: GAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGAG...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTGACAGAGTGTCTTCATaGCCACCCCCAGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSDRVSS*PPPVVG
Trigger: CCCCACTACTGGGGGTGGCAATGAAGACACTCTGTC...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCCCACCTCATGCATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCCTTCAGACGGGTCTGTaGGAGTATAATGATGAAAGC +
Preference number: 5 (lower is better)
Translates to: SPPHACHHHNYSLQVLVALQTGL*EYNDES
Trigger: GCTTTCATCATTATACTCCAACAGACCCGTCTGAAG...GGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATGCATGAGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GTCATAGCTCATACCACAGCAGGCAGGTCACGGGGGCATGCTGTGCTGCCAAGTCAATTTTTAGCCATCTaGAACATATTTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: VIAHTTAGRSRGHAVLPSQFLAI*NIFAAL
Trigger: CAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTG...ACTTGGCAGCACAGCATGCCCCCGTGACCTGCCTGCTGTGGTATGAGCTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCGATTATCCATTGTGTTaGCCCCAACCTGCTCATAGA +
Preference number: 5 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVDYPLC*PQPAHR
Trigger: TCTATGAGCAGGTTGGGGCAAACACAATGGATAATC...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGGGCTGGTGCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTTCTCAAGAGCAAGCTaGGCATTCAACTCGTCTACT +
Preference number: 5 (lower is better)
Translates to: KGWCIYFGYSDATTHGHDFSRAS*AFNSST
Trigger: AGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGAA...GTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCCTTGGATGGACTTTTaGATGCGAAGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRPWMDF*MRSNMV
Trigger: CACCATGTTGCTTCGCATCAAAAAGTCCATCCAAGG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAAACAAGTTGGGGTTCTaGCCCACTTGGGCATACAGG +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLNKLGF*PTWAYR
Trigger: CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTT...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAAACAAGTTGGGGTTCTaGCCCACTTGGGCATACAGG +
Preference number: 5 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKNKLGF*PTWAYR
Trigger: CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACCTCTACAGTCTGTCCTaGGCTGGCCCTTCCCACTTC +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYLYSLS*AGPSHF
Trigger: GAAGTGGGAAGGGCCAGCCAAGGACAGACTGTAGAG...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAGACAGAGTGTCTTCATaGCCACCCCCAGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIDRVSS*PPPVVG
Trigger: CCCCACTACTGGGGGTGGCAATGAAGACACTCTGTC...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAGCAGGAAGCCTGCTCTaGGTCATAGCTCATACCACA +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLAGSLL*VIAHTT
Trigger: TGTGGTATGAGCTATGACCAAGAGCAGGCTTCCTGC...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 90 bp GGTAGCAGAGTCATGTTTGCTCTGAAGCTGCATGTGGAGCTTGGCTaGCTGACAAAATGCGTTTCCTGCAGCACTCCAATTTTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: GSRVMFALKLHVELG*LTKCVSCSTPIFSH
Trigger: ATGGCTAAAAATTGGAGTGCTGCAGGAAACGCATTTTGTCAGGCAGCCAAGCTCCACATGCAGCTTCAGAGCAAACATGACTCTGCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000468128.5
ENST00000487502.1
CDS-3UTR CAA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAGCTGCATTTAAGCAGTaGATAGCCTCTTGGGGATCT +
Preference number: 5 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSAAFKQ*IASWGS
Trigger: AGATCCCCAAGAGGCTATCAACTGCTTAAATGCAGC...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000617876.4
CDS-3UTR CAA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGGATTATCCATTGTGTTaGCCCCAACCTGCTCATAGA +
Preference number: 5 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRDYPLC*PQPAHR
Trigger: TCTATGAGCAGGTTGGGGCAAACACAATGGATAATC...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCGGGGTTCTTGCCCACTaGGGCATACAGGACATTCCT +
Preference number: 5 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVGVLAH*GIQDIP
Trigger: AGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCC...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCCACTACCAATTCCAGTaGAGAGCCACCAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTHYQFQ*RATKNE
Trigger: TTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTG...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 90 bp ACAGAGATAGCATGCTACATGCCTGGCTGTCTTACCTTGGGGATCTaGCTTTTTGTAAGCATTTCCAGCATCCACAAAGCTGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: TEIACYMPGCLTLGI*LFVSISSIHKAGSR
Trigger: TCTGCTACCAGCTTTGTGGATGCTGGAAATGCTTACAAAAAGGCAGATCCCCAAGGTAAGACAGCCAGGCATGTAGCATGCTATCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487502.1
CDS-3UTR CAA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCATAGTAATGTGGTGCTaGGCTGCAATTGTAAACCTT +
Preference number: 5 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVIVMWC*AAIVNL
Trigger: AAGGTTTACAATTGCAGCCAAGCACCACATTACTAT...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AGCAACTCAGGACTCCATGGAGCAGGAAGCCTGCTCTTGGTCATAGCTCATACCATAGTAATGTGGTGCTaGGCTGCAATTGTAAACCTT +
Preference number: 5 (lower is better)
Translates to: SNSGLHGAGSLLLVIAHTIVMWC*AAIVNL
Trigger: AAGGTTTACAATTGCAGCCAAGCACCACATTACTAT...GGTATGAGCTATGACCAAGAGCAGGCTTCCTGCTCCATGGAGTCCTGAGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAGATTATCCATTGTGTTaGCCCCAACCTGCTCATAGA +
Preference number: 5 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSDYPLC*PQPAHR
Trigger: TCTATGAGCAGGTTGGGGCAAACACAATGGATAATC...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCATTCTCAAGAGCAAGCTaGGCATTCAACTCGTCTACT +
Preference number: 5 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSFSRAS*AFNSST
Trigger: AGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGAA...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATGATCCAAGCGAGATATaGAGTCAAATTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: HVTTITIACKSSWPPDVDDPSEI*SQIPSL
Trigger: CAGTGAAGGAATTTGACTCAATATCTCGCTTGGATC...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTACCTTGGATGGACTTTTaGATGCGAAGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLPWMDF*MRSNMV
Trigger: CACCATGTTGCTTCGCATCAAAAAGTCCATCCAAGG...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCAACAAGTTGGGGTTCTaGCCCACTTGGGCATACAGG +
Preference number: 5 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFNKLGF*PTWAYR
Trigger: CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTT...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTCCCCTGAGAAACAAGTaGGGGTTCTTGCCCACTTGG +
Preference number: 5 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIPLRNK*GFLPTW
Trigger: CCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGG...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCACTACCAATTCCAGTaGAGAGCCACCAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: HVTTITIACKSSWPPDVDHYQFQ*RATKNE
Trigger: TTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTG...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCGCAGGAAGCCTGCTCTaGGTCATAGCTCATACCACA +
Preference number: 5 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFAGSLL*VIAHTT
Trigger: TGTGGTATGAGCTATGACCAAGAGCAGGCTTCCTGC...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS TCA 90 bp CCTTGGATGGACTTTTTGATGCGAAGCAACATGGTGGTCAGCCACTaGTCCAAGCGAGATATTGAGTCAAATTCCTTCACTGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: PWMDFLMRSNMVVSH*SKRDIESNSFTASV
Trigger: CACTGAAGCAGTGAAGGAATTTGACTCAATATCTCGCTTGGATCAGTGGCTGACCACCATGTTGCTTCGCATCAAAAAGTCCATCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAGATTATCCATTGTGTTaGCCCCAACCTGCTCATAGA +
Preference number: 5 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKDYPLC*PQPAHR
Trigger: TCTATGAGCAGGTTGGGGCAAACACAATGGATAATC...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GCATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAAACAAAGGATTATCCATaGTGTTTGCCCCAACCTGCT +
Preference number: 5 (lower is better)
Translates to: AYTLVTVTPPHTVTTVQKTKDYP*CLPQPA
Trigger: AGCAGGTTGGGGCAAACACAATGGATAATCCTTTGT...TTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATCCTCTACAGTCTGTCTTCACAAAAGTGCATTaGGCTGGTTGTAGGATATAT +
Preference number: 5 (lower is better)
Translates to: TIACKSSWPPDVDPLQSVFTKVH*AGCRIY
Trigger: ATATATCCTACAACCAGCCAAATGCACTTTTGTGAA...GACAGACTGTAGAGGATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTTTAAAGGAAGTAAGTTaGCACACCACTAACTGGGCT +
Preference number: 5 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCLKEVS*HTTNWA
Trigger: AGCCCAGTTAGTGGTGTGCAAACTTACTTCCTTTAA...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCGCTGGTGCATATACTTaGGTTACAGTGACGCCACCA +
Preference number: 5 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFAGAYT*VTVTPP
Trigger: TGGTGGCGTCACTGTAACCAAAGTATATGCACCAGC...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACGCTGGTGCATATACTTaGGTTACAGTGACGCCACCA +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYAGAYT*VTVTPP
Trigger: TGGTGGCGTCACTGTAACCAAAGTATATGCACCAGC...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGACATTCCTGTACCACATTCAATTGTAAACCTTCCCTaGGGGATCTGCCTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: QVGVLAHLGIQDIPVPHSIVNLP*GICLFV
Trigger: TACAAAAAGGCAGATCCCCAAGGGAAGGTTTACAAT...TGAATGTGGTACAGGAATGTCCTGTATGCCCAAGTGGGCAAGAACCCCAACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398425.7
CDS CCA 90 bp AGTACTGACTGGTTAGTTACACACAGAGATAGCATGCTACATGCCTaGCTGTCTTACCTTGGGGATCTGCCTTTTTGTAAGCATTTCCAG +
Preference number: 5 (lower is better)
Translates to: STDWLVTHRDSMLHA*LSYLGDLPFCKHFQ
Trigger: CTGGAAATGCTTACAAAAAGGCAGATCCCCAAGGTAAGACAGCCAGGCATGTAGCATGCTATCTCTGTGTGTAACTAACCAGTCAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487502.1
CDS-3UTR CAA 90 bp CAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCTTGCCCACTTGGGCATACAGGCAATTTTTAGCCATCTaGAACATATTTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QSSPLRNKLGFLPTWAYRQFLAI*NIFAAL
Trigger: CAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTG...CCTGTATGCCCAAGTGGGCAAGAACCCCAACTTGTTTCTCAGGGGACTTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CTTGGGCATACAGGACATTCCTGTACCACATTCACCCCACCTAACCCATCATGTATAGTAATGTGGTGCTaGGCTGCAATTGTAAACCTT +
Preference number: 5 (lower is better)
Translates to: LGHTGHSCTTFTPPNPSCIVMWC*AAIVNL
Trigger: AAGGTTTACAATTGCAGCCAAGCACCACATTACTAT...ACATGATGGGTTAGGTGGGGTGAATGTGGTACAGGAATGTCCTGTATGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATGTCACCACCATAACTATAGCCTGCAAGTCCTCGTGGCCACCTGATGTGGATTTCACAAAAGTGCATTaGGCTGGTTGTAGGATATAT +
Preference number: 5 (lower is better)
Translates to: HVTTITIACKSSWPPDVDFTKVH*AGCRIY
Trigger: ATATATCCTACAACCAGCCAAATGCACTTTTGTGAA...ATCCACATCAGGTGGCCACGAGGACTTGCAGGCTATAGTTATGGTGGTGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATAAAGCCTCTTCTATTCTaGTGTTTCCTCCAAACAGCC +
Preference number: 5 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIKPLLF*CFLQTA
Trigger: GGCTGTTTGGAGGAAACACAAGAATAGAAGAGGCTT...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CCTACTCATCATTTCTCAAACAACCTGCAGTCGACCCTTGGCCTGGAAACACTAATAGTAATGTGGTGCTaGGCTGCAATTGTAAACCTT +
Preference number: 5 (lower is better)
Translates to: PTHHFSNNLQSTLGLETLIVMWC*AAIVNL
Trigger: AAGGTTTACAATTGCAGCCAAGCACCACATTACTAT...TAGTGTTTCCAGGCCAAGGGTCGACTGCAGGTTGTTTGAGAAATGATGAGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACACAAAGGATTATCCATaGTGTTTGCCCCAACCTGCT +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYTKDYP*CLPQPA
Trigger: AGCAGGTTGGGGCAAACACAATGGATAATCCTTTGT...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTACAAAGGATTATCCATaGTGTTTGCCCCAACCTGCT +
Preference number: 5 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFTKDYP*CLPQPA
Trigger: AGCAGGTTGGGGCAAACACAATGGATAATCCTTTGT...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTTCTCAAGAGCAAGCTaGGCATTCAACTCGTCTACT +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYFSRAS*AFNSST
Trigger: AGTAGACGAGTTGAATGCCAAGCTTGCTCTTGAGAA...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp CATAGGAAGTTTCGTTACCTGTCATCAGTGAAGCTCCGTGATGTCAGAGTGTCTGATCCAAGCGAGATATaGAGTCAAATTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: HRKFRYLSSVKLRDVRVSDPSEI*SQIPSL
Trigger: CAGTGAAGGAATTTGACTCAATATCTCGCTTGGATC...AGACACTCTGACATCACGGAGCTTCACTGATGACAGGTAACGAAACTTCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTCCTTGGATGGACTTTTaGATGCGAAGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIPWMDF*MRSNMV
Trigger: CACCATGTTGCTTCGCATCAAAAAGTCCATCCAAGG...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACCACAGCAACACAGACTaGGCGAGCTTAAACAATACA +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYHSNTD*ASLNNT
Trigger: TGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTG...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTCTTCAGACGGGTCTGTaGGAGTATAATGATGAAAGC +
Preference number: 5 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFLQTGL*EYNDES
Trigger: GCTTTCATCATTATACTCCAACAGACCCGTCTGAAG...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATTCCACCAGCTAAGAGAACAATCAAGTCCCCTGAGAAACAAGTTGGGGTTCGATCCAAGCGAGATATaGAGTCAAATTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: IFHQLREQSSPLRNKLGFDPSEI*SQIPSL
Trigger: CAGTGAAGGAATTTGACTCAATATCTCGCTTGGATC...GAACCCCAACTTGTTTCTCAGGGGACTTGATTGTTCTCTTAGCTGGTGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTCACAGCAACACAGACTaGGCGAGCTTAAACAATACA +
Preference number: 5 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIHSNTD*ASLNNT
Trigger: TGTATTGTTTAAGCTCGCCAAGTCTGTGTTGCTGTG...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCACTACCAATTCCAGTaGAGAGCCACCAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVHYQFQ*RATKNE
Trigger: TTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTCTTCAGACGGGTCTGTaGGAGTATAATGATGAAAGC +
Preference number: 5 (lower is better)
Translates to: KHETTHHYHKMNRSLSFILQTGL*EYNDES
Trigger: GCTTTCATCATTATACTCCAACAGACCCGTCTGAAG...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATATTAAAGGAAGTAAGTTaGCACACCACTAACTGGGCT +
Preference number: 5 (lower is better)
Translates to: IYFGYSDATTHGHDCAKILKEVS*HTTNWA
Trigger: AGCCCAGTTAGTGGTGTGCAAACTTACTTCCTTTAA...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TGCCAAAGCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTTAAAGGAAGTAAGTTaGCACACCACTAACTGGGCT +
Preference number: 5 (lower is better)
Translates to: CQSTEKMQSIYENNWAEYLKEVS*HTTNWA
Trigger: AGCCCAGTTAGTGGTGTGCAAACTTACTTCCTTTAA...GTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGCTTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GAAAGCTCCCTTCCTCACAATGTGATGCCTACAGACCCTGGCTATTCTAAATTTGCTGCATTTAAGCAGTaGATAGCCTCACTCCAATTT +
Preference number: 5 (lower is better)
Translates to: ESSLPHNVMPTDPGYSKFAAFKQ*IASLQF
Trigger: AAATTGGAGTGAGGCTATCAACTGCTTAAATGCAGC...AAATTTAGAATAGCCAGGGTCTGTAGGCATCACATTGTGAGGAAGGGAGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432543.6
CDS TCA 90 bp GCCTATTTCAGAACACAACTACATGTTTCTGACCTTAATTGCATTTaGACACCTATAATACGAAAGCAGGAAAGTACCAGGGCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: AYFRTQLHVSDLNCI*TPIIRKQESTRAPQ
Trigger: CTGAGGGGCCCTGGTACTTTCCTGCTTTCGTATTATAGGTGTTCAAATGCAATTAAGGTCAGAAACATGTAGTTGTGTTCTGAAATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472855.5
CDS-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAGCAGGAAGCCTGCTCTaGGTCATAGCTCATACCACA +
Preference number: 5 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTAGSLL*VIAHTT
Trigger: TGTGGTATGAGCTATGACCAAGAGCAGGCTTCCTGC...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp GCACAGAGAAAATGCAAAGCATCTATGAGAACAACTGGGCTGAGTACTCAAGTCCAATTTTTAGCCATCTaGAACATATTTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AQRKCKASMRTTGLSTQVQFLAI*NIFAAL
Trigger: CAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTG...GACTTGAGTACTCAGCCCAGTTGTTCTCATAGATGCTTTGCATTTTCTCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATACCTTGGATGGACTTTTaGATGCGAAGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: YSEDIQETSVCLKYNISIPWMDF*MRSNMV
Trigger: CACCATGTTGCTTCGCATCAAAAAGTCCATCCAAGG...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp ATATACTTTGGTTACAGTGACGCCACCACACACGGTCACGACTGTGCAAAAATATTCACAAAAGTGCATTaGGCTGGTTGTAGGATATAT +
Preference number: 5 (lower is better)
Translates to: IYFGYSDATTHGHDCAKIFTKVH*AGCRIY
Trigger: ATATATCCTACAACCAGCCAAATGCACTTTTGTGAA...TATTTTTGCACAGTCGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 90 bp TGCGTTTCCTGCAGCACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTATTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: CVSCSTPIFSHLEHI*SSGIHFTSLFYSCV
Trigger: AACACAAGAATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGCTGCAGGAAACGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000468128.5
ENST00000487502.1
CDS-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACAGCTGCATTTAAGCAGTaGATAGCCTCTTGGGGATCT +
Preference number: 5 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTAAFKQ*IASWGS
Trigger: AGATCCCCAAGAGGCTATCAACTGCTTAAATGCAGC...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377026.4
ENST00000617876.4
CDS-3UTR CAA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATAACAAAGGATTATCCATaGTGTTTGCCCCAACCTGCT +
Preference number: 5 (lower is better)
Translates to: YSEDIQETSVCLKYNISITKDYP*CLPQPA
Trigger: AGCAGGTTGGGGCAAACACAATGGATAATCCTTTGT...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS-3UTR CAA 90 bp AAGCATGAAACAACCCATCATTACCACAAGATGAACAGGAGCCTCTCCTTCATTTTCACAAAAGTGCATTaGGCTGGTTGTAGGATATAT +
Preference number: 5 (lower is better)
Translates to: KHETTHHYHKMNRSLSFIFTKVH*AGCRIY
Trigger: ATATATCCTACAACCAGCCAAATGCACTTTTGTGAA...AATGAAGGAGAGGCTCCTGTTCATCTTGTGGTAATGATGGGTTGTTTCATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 90 bp GCAGTTGATAGCCTCACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTATTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: AVDSLTPIFSHLEHI*SSGIHFTSLFYSCV
Trigger: AACACAAGAATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGAGGCTATCAACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432543.6
CDS-3UTR CAA 90 bp TATTCAGAGGACATTCAGGAGACAAGCGTATGTCTAAAGTACAATATCAGCATACACTACCAATTCCAGTaGAGAGCCACCAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: YSEDIQETSVCLKYNISIHYQFQ*RATKNE
Trigger: TTCATTTTTGGTGGCTCTCAACTGGAATTGGTAGTG...TATGCTGATATTGTACTTTAGACATACGCTTGTCTCCTGAATGTCCTCTGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 90 bp ATTGTAAACCTTCCCACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTATTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: IVNLPTPIFSHLEHI*SSGIHFTSLFYSCV
Trigger: AACACAAGAATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGGGAAGGTTTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472855.5
CDS-3UTR CAA 90 bp AAACAAAAATTAATTCTTAACCCCGGAACTGGTCCCAGTGTTTATTGCAATACACAATTTTTAGCCATCTaGAACATATTTGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: KQKLILNPGTGPSVYCNTQFLAI*NIFAAL
Trigger: CAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTG...TGTATTGCAATAAACACTGGGACCAGTTCCGGGGTTAAGAATTAATTTTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS CAA 90 bp TCGGCCTCCGCCATCAGCTGTACTGCCTCACGCTCCTTCCCCGCGTaGTCCATGTCGCCCGCCGCGGCCGCCACAGCCCCCTCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: SASAISCTASRSFPA*SMSPAAAATAPSAG
Trigger: GCCGGCTGAGGGGGCTGTGGCGGCCGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCGGAGGCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000487502.1
ENST00000617876.4
CDS CAA 72 bp GCCATCAGCTGTACTGCCTCACGCTCCTTCCCCGCGTaGTCCATGTCGCCCGCCGCGGCCGCCACAGCCCCC +
Preference number: 6 (lower is better)
Translates to: AISCTASRSFPA*SMSPAAAATAP
Trigger: GGGGGCTGTGGCGGCCGCGGCGGGCGACATGGACAACGCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000487502.1
ENST00000617876.4
CDS GCA 72 bp CTTGACTCGCTTCTCGGCCTCCGCCATCAGCTGTACTaGCTCACGCTCCTTCCCCGCGTTGTCCATGTCGCC +
Preference number: 6 (lower is better)
Translates to: LDSLLGLRHQLY*LTLLPRVVHVA
Trigger: GGCGACATGGACAACGCGGGGAAGGAGCGTGAGGCAGTACAGCTGATGGCGGAGGCCGAGAAGCGAGTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000472855.5
ENST00000487502.1
ENST00000617876.4
CDS CAA 72 bp CCTCCAAACAGCCCTCGGAGGAAGGAGTGGGAGGCCTaGACTCGCTTCTCGGCCTCCGCCATCAGCTGTACT +
Preference number: 6 (lower is better)
Translates to: PPNSPRRKEWEA*TRFSASAISCT
Trigger: AGTACAGCTGATGGCGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGGGCTGTTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000472855.5
ENST00000487502.1
ENST00000617876.4
CDS CAA 90 bp CTTGTGTTTCCTCCAAACAGCCCTCGGAGGAAGGAGTGGGAGGCCTaGACTCGCTTCTCGGCCTCCGCCATCAGCTGTACTGCCTCACGC +
Preference number: 6 (lower is better)
Translates to: LVFPPNSPRRKEWEA*TRFSASAISCTASR
Trigger: GCGTGAGGCAGTACAGCTGATGGCGGAGGCCGAGAAGCGAGTCAAGGCCTCCCACTCCTTCCTCCGAGGGCTGTTTGGAGGAAACACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000472855.5
ENST00000487502.1
ENST00000617876.4
CDS TCA 72 bp CTCCATCTCCTTCTCCATCCCCTTGGATGGACTTTTTaGTGCGAAGCAACATGGTGGTCAGCCACTGATCCA +
Preference number: 6 (lower is better)
Translates to: LHLLLHPLGWTF*CEATWWSATDP
Trigger: TGGATCAGTGGCTGACCACCATGTTGCTTCGCATCAAAAAGTCCATCCAAGGGGATGGAGAAGGAGATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS GCA 72 bp GCATGCTACATGCCTGGCTGTCTTACCTTGGGGATCTaGCTTTTTGTAAGCATTTCCAGCATCCACAAAGCT +
Preference number: 6 (lower is better)
Translates to: ACYMPGCLTLGI*LFVSISSIHKA
Trigger: AGCTTTGTGGATGCTGGAAATGCTTACAAAAAGGCAGATCCCCAAGGTAAGACAGCCAGGCATGTAGCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487502.1
CDS CAA 72 bp ACAGAGATAGCATGCTACATGCCTGGCTGTCTTACCTaGGGGATCTGCCTTTTTGTAAGCATTTCCAGCATC +
Preference number: 6 (lower is better)
Translates to: TEIACYMPGCLT*GICLFVSISSI
Trigger: GATGCTGGAAATGCTTACAAAAAGGCAGATCCCCAAGGTAAGACAGCCAGGCATGTAGCATGCTATCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487502.1
CDS TCA 72 bp CAACATGGTGGTCAGCCACTGATCCAAGCGAGATATTaGGTCAAATTCCTTCACTGCTTCAGTGTAAGCTTC +
Preference number: 6 (lower is better)
Translates to: QHGGQPLIQARY*VKFLHCFSVSF
Trigger: GAAGCTTACACTGAAGCAGTGAAGGAATTTGACTCAATATCTCGCTTGGATCAGTGGCTGACCACCATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS CCA 72 bp ACCAACACTGACCTTAACGTTGAGGGAAGTACTGACTaGTTAGTTACACACAGAGATAGCATGCTACATGCC +
Preference number: 6 (lower is better)
Translates to: TNTDLNVEGSTD*LVTHRDSMLHA
Trigger: GGCATGTAGCATGCTATCTCTGTGTGTAACTAACCAGTCAGTACTTCCCTCAACGTTAAGGTCAGTGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487502.1
CDS CAA 72 bp GCAACATGGTGGTCAGCCACTGATCCAAGCGAGATATaGAGTCAAATTCCTTCACTGCTTCAGTGTAAGCTT +
Preference number: 6 (lower is better)
Translates to: ATWWSATDPSEI*SQIPSLLQCKL
Trigger: AAGCTTACACTGAAGCAGTGAAGGAATTTGACTCAATATCTCGCTTGGATCAGTGGCTGACCACCATGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS TCA 72 bp GACTTTTTGATGCGAAGCAACATGGTGGTCAGCCACTaGTCCAAGCGAGATATTGAGTCAAATTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: DFLMRSNMVVSH*SKRDIESNSFT
Trigger: AGTGAAGGAATTTGACTCAATATCTCGCTTGGATCAGTGGCTGACCACCATGTTGCTTCGCATCAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000617876.4
CDS CAA 72 bp AATCCTTTGCACTGTATTTCAACAAAGGATTATCCATaGTGTTTGCCCCAACCTGCTCATAGATCTCAATGG +
Preference number: 6 (lower is better)
Translates to: NPLHCISTKDYP*CLPQPAHRSQW
Trigger: CCATTGAGATCTATGAGCAGGTTGGGGCAAACACAATGGATAATCCTTTGTTGAAATACAGTGCAAAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000432543.6
ENST00000468128.5
ENST00000472855.5
ENST00000617876.4
CDS GCA 72 bp TGCAGCACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: CSTPIFSHLEHI*SSGIHFTSLFY
Trigger: ATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377026.4
ENST00000398425.7
ENST00000468128.5
ENST00000487502.1
CDS GCA 72 bp AGCCTCACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: SLTPIFSHLEHI*SSGIHFTSLFY
Trigger: ATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGAGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432543.6
CDS GCA 72 bp CTTCCCACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: LPTPIFSHLEHI*SSGIHFTSLFY
Trigger: ATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472855.5
CDS TCA 72 bp AGAACACAACTACATGTTTCTGACCTTAATTGCATTTaGACACCTATAATACGAAAGCAGGAAAGTACCAGG +
Preference number: 6 (lower is better)
Translates to: RTQLHVSDLNCI*TPIIRKQESTR
Trigger: CCTGGTACTTTCCTGCTTTCGTATTATAGGTGTTCAAATGCAATTAAGGTCAGAAACATGTAGTTGTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472855.5
CDS GCA 72 bp TCAAATAATGTACCATGTCCCAAAAGCATAACTTACTaGTTCAGTGTAAGCTTCACTGTTCTGTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: SNNVPCPKSITY*FSVSFTVLFFM
Trigger: CATGAAGAACAGAACAGTGAAGCTTACACTGAAGCAGTAAGTTATGCTTTTGGGACATGGTACATTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472855.5
CDS GCA 72 bp AGACACACTCCAATTTTTAGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACAAGCCTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: RHTPIFSHLEHI*SSGIHFTSLFY
Trigger: ATAGAAGAGGCTTGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCTAAAAATTGGAGTGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617876.4