Pregenerated sensors for NANP (Homo sapiens)
Ensembl gene IDs: ENSG00000170191Ensembl transcript IDs: ENST00000304788.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTCCTGGGCACTCCCAGATCTGAGATGTTCGTGCCTTGTATGTaGAGGTGCACATGGAACCAAACCTCCCCACCAGGTGCTGGTATT | + |
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Preference number: 1 (lower is better) Translates to: WVLGTPRSEMFVPCM*RCTWNQTSPPGAGI Trigger: AATACCAGCACCTGGTGGGGAGGTTTGGTTCCATGTGCACCTCCACATACAAGGCACGAACATCTCAGATCTGGGAGTGCCCAGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR CCA 90 bp | AGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCACTaGGTCCTGGGCACTCCCAGATCTGAGATGTTCGTGCCTTGTATG | + |
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Preference number: 1 (lower is better) Translates to: RTLVKTCFPTILSIH*VLGTPRSEMFVPCM Trigger: CATACAAGGCACGAACATCTCAGATCTGGGAGTGCCCAGGACCCAGTGGATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAGTCACACACACCCTTaGGAGGCTGAGGTGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSISHTHP*EAEVGG Trigger: TCCTCCCACCTCAGCCTCCCAAGGGTGTGTGTGACT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCTCCCCACCAGGTGCTaGTATTCCAGGTGCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSILPTRC*YSRCSV Trigger: GACACTGCACCTGGAATACCAGCACCTGGTGGGGAG...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGCCTCTGGCTTTGTGTaGGAAGGCCACTACAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIASGFV*EGHYRE Trigger: TTCCCTGTAGTGGCCTTCTCACACAAAGCCAGAGGC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAACCTCCCCACCAGGTaGTGGTATTCCAGGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSINLPTR*WYSRCS Trigger: ACTGCACCTGGAATACCAGCACCTGGTGGGGAGGTT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGGTGGGAGGATCACTTaGATCCAGGAATTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIGGRIT*IQEFET Trigger: GGTCTCGAATTCCTGGATTCAAGTGATCCTCCCACC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGGGCACTCCCAGATCTaGGATGTTCGTGCCTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIGHSQI*DVRALY Trigger: ATACAAGGCACGAACATCTCAGATCTGGGAGTGCCC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCATGGCACTCCAACCTaGGCGACAGAGATCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIHGTPT*ATEIPF Trigger: AAATGGGATCTCTGTCGCCCAGGTTGGAGTGCCATG...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCATGTGGAGGTGCACATaGAACCAAACCTCCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIMWRCT*NQTSPP Trigger: TGGTGGGGAGGTTTGGTTCCATGTGCACCTCCACAT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGATCTGAGATGTTCGTaGCTTGTATGTGGAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIDLRCS*LVCGGA Trigger: TGCACCTCCACATACAAGGCACGAACATCTCAGATC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCTTCGTGCCTTGTATGTaGAGGTGCACATGGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIFVPCM*RCTWNQ Trigger: TTGGTTCCATGTGCACCTCCACATACAAGGCACGAA...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGAAAGGGCATTTGCATaGGGCAGAGAATTCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIERAFA*GREFCF Trigger: GAAACAGAATTCTCTGCCTCATGCAAATGCCCTTTC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCACACGAAAGGGCATTTaGATGAGGCAGAGAATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSITRKGI*MRQRIL Trigger: CAGAATTCTCTGCCTCATGCAAATGCCCTTTCGTGT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCTGTGTAAAGCAATCCTaGTTGGCATTATGCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSICVKQS*LALCSQ Trigger: TTGGCTGCATAATGCCAAGCAGGATTGCTTTACACA...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGAGGAATCTGTCACATaGCATAGAAAAATTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIEESVT*HRKIAP Trigger: GGGAGCAATTTTTCTATGGCATGTGACAGATTCCTC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCACTTTTAGTGCCACGTaGCTTGCAATTATCTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSITFSAT*LAIISS Trigger: GCTAGAGATAATTGCAAGGCACGTGGCACTAAAAGT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCACAGCTTTTTCTAACTaGAGGAATCTGTCACATGCC | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSITAFSN*RNLSHA Trigger: GGCATGTGACAGATTCCTCCAGTTAGAAAAAGCTGT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCTATGGGTACTGCATTTaGAACTACAAACATCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIYGYCI*NYKHPL Trigger: CAGAGGATGTTTGTAGTTTCAAATGCAGTACCCATA...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCTATCCTGTTGAGATTTaGTACCATGATACAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSIYPVEI*YHDTGV Trigger: CACTCCTGTATCATGGTAGCAAATCTCAACAGGATA...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCTCCAAGACGATGCCTTaGTATGTAGCCATTAATTAT | + |
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Preference number: 2 (lower is better) Translates to: SNKPRTLVKTCFPTILSISKTMP*YVAINY Trigger: ATAATTAATGGCTACATAGCAAGGCATCGTCTTGGA...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR GCA 72 bp | GTGGAGGTGCACATGGAACCAAACCTCCCCACCAGGTaGTGGTATTCCAGGTGCAGTGTCCATTCATGTCTG | + |
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Preference number: 3 (lower is better) Translates to: VEVHMEPNLPTR*WYSRCSVHSCL Trigger: CAGACATGAATGGACACTGCACCTGGAATACCAGCACCTGGTGGGGAGGTTTGGTTCCATGTGCACCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR GCA 72 bp | ACTGGGTCCTGGGCACTCCCAGATCTGAGATGTTCGTaGCTTGTATGTGGAGGTGCACATGGAACCAAACCT | + |
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Preference number: 3 (lower is better) Translates to: TGSWALPDLRCS*LVCGGAHGTKP Trigger: AGGTTTGGTTCCATGTGCACCTCCACATACAAGGCACGAACATCTCAGATCTGGGAGTGCCCAGGACCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR CCA 72 bp | GAGGTGCACATGGAACCAAACCTCCCCACCAGGTGCTaGTATTCCAGGTGCAGTGTCCATTCATGTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: EVHMEPNLPTRC*YSRCSVHSCLF Trigger: GAACAGACATGAATGGACACTGCACCTGGAATACCAGCACCTGGTGGGGAGGTTTGGTTCCATGTGCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGGAGGGCCTCTGGCTTaGTGTGAGAAGGCCACTACA | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSIGGPLA*CEKATT Trigger: TGTAGTGGCCTTCTCACACAAAGCCAGAGGCCCTCC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAGGTGGGAGGATCACTaGAATCCAGGAATTCGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSIRWEDH*NPGIRD Trigger: GTCTCGAATTCCTGGATTCAAGTGATCCTCCCACCT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR GCA 72 bp | TTTGAAAGCAATAAACCAAGAACTTTGGTAAAGACCTaGTTTCCTACAATACTGAGCATCCACTGGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: FESNKPRTLVKT*FPTILSIHWVL Trigger: CAGGACCCAGTGGATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCTTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGTAAAGCAATCCTGCTaGGCATTATGCAGCCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSIVKQSC*ALCSQD Trigger: ATCTTGGCTGCATAATGCCAAGCAGGATTGCTTTAC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAACACGAAAGGGCATTaGCATGAGGCAGAGAATTCT | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSINTKGH*HEAENS Trigger: AGAATTCTCTGCCTCATGCAAATGCCCTTTCGTGTT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCTTAGTGCCACGTGCCTaGCAATTATCTCTAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSILVPRA*QLSLAK Trigger: TTTTGCTAGAGATAATTGCAAGGCACGTGGCACTAA...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCTAGAAGCTATCCTGTaGAGATTTGCTACCATGATA | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSILEAIL*RFATMI Trigger: TATCATGGTAGCAAATCTCAACAGGATAGCTTCTAG...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAAGGAGCACCATGTGTaGATTTTAACAGCTTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSIKEHHV*ILTAFS Trigger: AGAAAAAGCTGTTAAAATCAACACATGGTGCTCCTT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| 3UTR-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCATATGGGTACTGCATTaGAAACTACAAACATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SNKPRTLVKTCFPTILSIIWVLH*KLQTSS Trigger: AGAGGATGTTTGTAGTTTCAAATGCAGTACCCATAT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCTTGCCACCGCCGCCTaGGCATGCGCAAGGCGGACT | + |
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Preference number: 4 (lower is better) Translates to: SNKPRTLVKTCFPTILSILATAA*ACARRT Trigger: AGTCCGCCTTGCGCATGCGCAGGCGGCGGTGGCAAG...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCCAACATGCCTCTCCTaGTCGCCCCGGCCGTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SNKPRTLVKTCFPTILSIPTCLS*SPRPCR Trigger: TCGACACGGCCGGGGCGAGCAGGAGAGGCATGTTGG...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR TCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCCCCCGGCCGTGTCGATaGGAGTGTTGTCCAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SNKPRTLVKTCFPTILSIPRPCR*ECCPSQ Trigger: TTGACTTGGACAACACTCTCATCGACACGGCCGGGG...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR CCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAAATATGGACGGTGCTaGTTTCTCCTCTCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SNKPRTLVKTCFPTILSIKYGRC*FLLSLL Trigger: GAGCAGAGAGAGGAGAAACCAGCACCGTCCATATTT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCATTGATCCAGACTGTTaGTTTCAATCCTGCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: SNKPRTLVKTCFPTILSIIDPDC*FQSCIE Trigger: CTCAATGCAGGATTGAAAGCAACAGTCTGGATCAAT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR GCA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCACTTTGGTAAAGACCTaGTTTCCTACAATACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SNKPRTLVKTCFPTILSITLVKT*FPTILS Trigger: GCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCGCGCGAACCGTAGCCTaGCCACCGCCGCCTGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: SNKPRTLVKTCFPTILSIARTVA*PPPPAH Trigger: ATGCGCAGGCGGCGGTGGCAAGGCTACGGTTCGCGC...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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| CDS-3UTR CAA 90 bp | AGCAATAAACCAAGAACTTTGGTAAAGACCTGCTTTCCTACAATACTGAGCATCAATAAACCAAGAACTTaGGTAAAGACCTGCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SNKPRTLVKTCFPTILSINKPRT*VKTCFP Trigger: AGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATT...GATGCTCAGTATTGTAGGAAAGCAGGTCTTTACCAAAGTTCTTGGTTTATTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304788.4 |
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