Pregenerated sensors for NALT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000237886Ensembl transcript IDs: ENST00000429224.1, ENST00000450304.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTCGGGCCTGTGCACCCGGCCGCACCATCCGTAACGCGGGCTTATaGGCGTGCCTGGCTGCTGGGTGGCCTGACGGGTGGACACCGAAT | + |
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Preference number: 5 (lower is better) Translates to: PRACAPGRTIRNAGL*ACLAAGWPDGWTPN Trigger: ATTCGGTGTCCACCCGTCAGGCCACCCAGCAGCCAGGCACGCTCATAAGCCCGCGTTACGGATGGTGCGGCCGGGTGCACAGGCCCGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS CCA 90 bp | AGCGAAGGCCCCACGGTGTGCCCGATGGTCAGGGGCTGCAGTGGATaGGGACGTGGAGGCTGCGTAGGAGGCACCCTGGAGGCTGGACAC | + |
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Preference number: 5 (lower is better) Translates to: SEGPTVCPMVRGCSG*GRGGCVGGTLEAGH Trigger: GTGTCCAGCCTCCAGGGTGCCTCCTACGCAGCCTCCACGTCCCCATCCACTGCAGCCCCTGACCATCGGGCACACCGTGGGGCCTTCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000450304.1 |
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| CDS CCA 90 bp | GTGCACCCGGCCGCACCATCCGTAACGCGGGCTTATGAGCGTGCCTaGCTGCTGGGTGGCCTGACGGGTGGACACCGAATGGGCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: VHPAAPSVTRAYERA*LLGGLTGGHRMGHS Trigger: AGAGTGGCCCATTCGGTGTCCACCCGTCAGGCCACCCAGCAGCCAGGCACGCTCATAAGCCCGCGTTACGGATGGTGCGGCCGGGTGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS CCA 90 bp | TGCTTTCAGTCCCAGGGGCCACTCCAACCTGGCCACGCCAAGCCATaGTCCCTGCACCGAGTCCAGCCTGCTGCCTTGGGCGGTGAACAG | + |
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Preference number: 5 (lower is better) Translates to: CFQSQGPLQPGHAKP*SLHRVQPAALGGEQ Trigger: CTGTTCACCGCCCAAGGCAGCAGGCTGGACTCGGTGCAGGGACCATGGCTTGGCGTGGCCAGGTTGGAGTGGCCCCTGGGACTGAAAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS TCA 72 bp | TGTGCACCCGGCCGCACCATCCGTAACGCGGGCTTATaGGCGTGCCTGGCTGCTGGGTGGCCTGACGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CAPGRTIRNAGL*ACLAAGWPDGW Trigger: CCACCCGTCAGGCCACCCAGCAGCCAGGCACGCTCATAAGCCCGCGTTACGGATGGTGCGGCCGGGTGCACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS CCA 72 bp | TCCCAGGGGCCACTCCAACCTGGCCACGCCAAGCCATaGTCCCTGCACCGAGTCCAGCCTGCTGCCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SQGPLQPGHAKP*SLHRVQPAALG Trigger: GCCCAAGGCAGCAGGCTGGACTCGGTGCAGGGACCATGGCTTGGCGTGGCCAGGTTGGAGTGGCCCCTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS GCA 72 bp | GGCCACTCCAACCTGGCCACGCCAAGCCATGGTCCCTaGACCGAGTCCAGCCTGCTGCCTTGGGCGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: GHSNLATPSHGP*TESSLLPWAVN Trigger: GTTCACCGCCCAAGGCAGCAGGCTGGACTCGGTGCAGGGACCATGGCTTGGCGTGGCCAGGTTGGAGTGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS GCA 72 bp | CCGGCCCGAATCCATCCTAGAGCAAGGACTGCCAGGTaGGTCACAGCGGACCGCCCAGCACAGGGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PARIHPRARTAR*VTADRPAQGTR Trigger: CCTGGTCCCCTGTGCTGGGCGGTCCGCTGTGACGCACCTGGCAGTCCTTGCTCTAGGATGGATTCGGGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450304.1 |
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| CDS CCA 72 bp | CGCCCCCTGCTTTCAGTCCCAGGGGCCACTCCAACCTaGCCACGCCAAGCCATGGTCCCTGCACCGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RPLLSVPGATPT*PRQAMVPAPSP Trigger: TGGACTCGGTGCAGGGACCATGGCTTGGCGTGGCCAGGTTGGAGTGGCCCCTGGGACTGAAAGCAGGGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS CCA 72 bp | GCCGCACCATCCGTAACGCGGGCTTATGAGCGTGCCTaGCTGCTGGGTGGCCTGACGGGTGGACACCGAATG | + |
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Preference number: 6 (lower is better) Translates to: AAPSVTRAYERA*LLGGLTGGHRM Trigger: CATTCGGTGTCCACCCGTCAGGCCACCCAGCAGCCAGGCACGCTCATAAGCCCGCGTTACGGATGGTGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS CAA 72 bp | TGGGCCACTCTCTTCTATGCAAATTTCAGTCGCCAGTaGTCGCCGAGCGCGGCAACCGCCAGAGCCGGATCC | + |
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Preference number: 6 (lower is better) Translates to: WATLFYANFSRQ*SPSAATARAGS Trigger: GGATCCGGCTCTGGCGGTTGCCGCGCTCGGCGACAACTGGCGACTGAAATTTGCATAGAAGAGAGTGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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| CDS CAA 90 bp | GGCAACCGCCAGAGCCGGATCCTTCCGCAGCCCCGGCTCAAACTTTaGGCCTCTGAAAACTTTCAAACGAGAAGTAGTCCCAGGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: GNRQSRILPQPRLKL*ASENFQTRSSPRRP Trigger: CGGGCGCCTGGGACTACTTCTCGTTTGAAAGTTTTCAGAGGCCAAAAGTTTGAGCCGGGGCTGCGGAAGGATCCGGCTCTGGCGGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429224.1 |
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