RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAGS (Homo sapiens)

Ensembl gene IDs: ENSG00000161653

Ensembl transcript IDs: ENST00000293404.8, ENST00000589767.1, ENST00000592915.1

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATCACTCAGCCAACAAGCCCCCTTCAGCCTGTGGCTGGCTGCCTaGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: RSLSQQAPFSLWLAA*GHAQLAWLLVHPGH
Trigger: ATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAGGCAGCCAGCCACAGGCTGAAGGGGGCTTGTTGGCTGAGTGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR GCA 90 bp CTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCTaGTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAGC +
Preference number: 1 (lower is better)
Translates to: LCLSHFSASSGQSWG*FLLCRSLSQQAPFS
Trigger: GCTGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR CCA 90 bp TCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTaGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCC +
Preference number: 1 (lower is better)
Translates to: SFLCLSHFSASSGQS*GCFLLCRSLSQQAP
Trigger: GGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR CCA 90 bp CCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTaGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCT +
Preference number: 1 (lower is better)
Translates to: PFGCSFRVSRVGVLD*SPSFLCLSHFSASS
Trigger: AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR GCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCAGCCTGTGGCTGGCTaGCTGGGGTCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGQPVAG*LGSCPA
Trigger: AGCTGGGCATGACCCCAGGCAGCCAGCCACAGGCTG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR GCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCGGCTGCCTGGGGTCATaGCCAGCTGGCATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGGCLGS*PAGMAF
Trigger: AAAAGCCATGCCAGCTGGGCATGACCCCAGGCAGCC...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCATGCCCAGCTGGCATaGCTTTTGGTCCACCCTGGC +
Preference number: 2 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGHAQLA*LLVHPG
Trigger: GCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTCTGTGGCTGGCTGCCTaGGGTCATGCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSLWLAA*GHAQLA
Trigger: TGCCAGCTGGGCATGACCCCAGGCAGCCAGCCACAG...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR GCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGCTGCCTGGGGTCATaGCCAGCTGGCATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSGCLGS*PAGMAF
Trigger: AAAAGCCATGCCAGCTGGGCATGACCCCAGGCAGCC...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTCATGCCCAGCTGGCATaGCTTTTGGTCCACCCTGGC +
Preference number: 2 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSHAQLA*LLVHPG
Trigger: GCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATG...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAGGGGTCATGCCCAGCTaGCATGGCTTTTGGTCCACC +
Preference number: 2 (lower is better)
Translates to: RAGAAFSSADHSANKPPSGVMPS*HGFWST
Trigger: GGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCC...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTGTTGGGGTCCTAGACTaGTCCCCTTCTTTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPVGVLD*SPSFLC
Trigger: GCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAAC...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAAGCTGGCATGGCTTTTaGTCCACCCTGGCCATTCCA +
Preference number: 2 (lower is better)
Translates to: RAGAAFSSADHSANKPPSSWHGF*STLAIP
Trigger: TGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCT...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTAGCTGGCATGGCTTTTaGTCCACCCTGGCCATTCCA +
Preference number: 2 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSSWHGF*STLAIP
Trigger: TGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCT...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR GCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCGGGCAGAGCTGGGGCTaGTTTCTCCTCTGCAGATCA +
Preference number: 2 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSGQSWG*FLLCRS
Trigger: TGATCTGCAGAGGAGAAAGCAGCCCCAGCTCTGCCC...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAACTGTGGCTGGCTGCCTaGGGTCATGCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: MVEYHAGRGIILGKGASKLWLAA*GHAQLA
Trigger: TGCCAGCTGGGCATGACCCCAGGCAGCCAGCCACAG...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR GCA 72 bp CGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTaGTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: RVGVLDWSPSFL*LSHFSASSGQS
Trigger: GCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR CCA 72 bp TGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTaGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAA +
Preference number: 3 (lower is better)
Translates to: CLSHFSASSGQS*GCFLLCRSLSQ
Trigger: TTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CAA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTCAGCTGGCATGGCTTTaGGTCCACCCTGGCCATTCC +
Preference number: 3 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSQLAWL*VHPGHS
Trigger: GGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTG...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCCTTCTTTCCTGTGCTaGTCCCACTTCAGCGCCTCC +
Preference number: 3 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPPSFLC*SHFSAS
Trigger: GGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR CCA 72 bp TGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTaGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGC +
Preference number: 3 (lower is better)
Translates to: CSFRVSRVGVLD*SPSFLCLSHFS
Trigger: GCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR-3UTR CAA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAACCTTCTTTCCTGTGCTaGTCCCACTTCAGCGCCTCC +
Preference number: 3 (lower is better)
Translates to: MVEYHAGRGIILGKGASKPSFLC*SHFSAS
Trigger: GGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCACGGCCGAGGAGTGGTaGGGCAGGCGGCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRATAEEW*GRRLST
Trigger: CGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGT...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCAGGTCTGGAACTGCGTaGGCCAGTGGCGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRARSGTA*ASGAPP
Trigger: GGGAGGCGCGCCACTGGCTCACGCAGTTCCAGACCT...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCGATGCCGCCGTAGCTaGCATGGGGAGCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGRCRRS*HGEPAR
Trigger: CCGAGCCGGCTCCCCATGCCAGCTACGGCGGCATCG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCGGCCGTCTCCCCGATaGGGCACAGGATGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGRPSPR*GTGWGC
Trigger: GCATCCCCATCCTGTGCCCCATCGGGGAGACGGCCG...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCCCGGAGCCTTGGCCCTaGCGGCTGGAGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAPEPWP*RLELTT
Trigger: TGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGG...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCCGCCCTGCTGGCACTTaGGCACCTCCTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRARPAGT*APPRPP
Trigger: AGGTGGACGAGGAGGTGCTCAAGTGCCAGCAGGGCG...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCGGCGACGGGCGACTaGGAGACGTCGTCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPSATGD*ETSSAP
Trigger: GGGCGCGGACGACGTCTCCCAGTCGCCCGTCGCCGA...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCTCGGCGACGGGCGACTaGGAGACGTCGTCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPSATGD*ETSSAP
Trigger: GGGCGCGGACGACGTCTCCCAGTCGCCCGTCGCCGA...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCCGGAGCCTTGGCCCTaGCGGCTGGAGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGPEPWP*RLELTT
Trigger: TGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCTGTGGCTGGCTGCCTaGGGTCATGCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGLWLAA*GHAQLA
Trigger: TGCCAGCTGGGCATGACCCCAGGCAGCCAGCCACAG...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTCGGCGGCGTTGTACCTaGCGCAGCGGGAGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPRRRCT*RSGRAA
Trigger: TGCCGCTCTCCCGCTGCGCCAGGTACAACGCCGCCG...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS-3UTR TCA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCTGCCGAAGCTGGCGTTaGCCAGGTCCACTAGACGGC +
Preference number: 4 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGCRSWR*PGPLDG
Trigger: GCCGTCTAGTGGACCTGGTCAACGCCAGCTTCGGCA...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCGGCACAGGATGGGGATaGTGCCCGACTCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGGTGWG*CPTPGT
Trigger: GGTGCCTGGAGTCGGGCAGCATCCCCATCCTGTGCC...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCTCACCCACTCGGCGTTaGACACCAGGTCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRASPTRR*TPGPGR
Trigger: CCGACCTGGACCTGGTGTGCAACGCCGAGTGGGTGA...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAGGCTCTGGGGACTCGTaGGGCACCGGGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSGSGDS*GTGGLG
Trigger: TCCCAGGCCCCCGGTGCCCCACGAGTCCCCAGAGCC...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGCGCCTCCCCAGGGCTaGCCCCGCACTGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPAPPQG*PRTGSG
Trigger: TCCTGAACCAGTGCGGGGCCAGCCCTGGGGAGGCGC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCTGTGGCTGGCTGCCTaGGGTCATGCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGLWLAA*GHAQLA
Trigger: TGCCAGCTGGGCATGACCCCAGGCAGCCAGCCACAG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCTCAGCGCCGTCGCCATaGCGACAACCAACTCTTGCC +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRASAPSP*RQPTLA
Trigger: GGCAAGAGTTGGTTGTCGTCATGGCGACGGCGCTGA...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293404.8
CDS-3UTR TCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTCCTCGTCCACCTCGATaGCGGCGAAGGGCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPPRPPR*RRRACP
Trigger: CGGACAAGCCCTTCGCCGTCATCGAGGTGGACGAGG...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCTGCCGAAGCTGGCGTTaGCCAGGTCCACTAGACGGC +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGCRSWR*PGPLDG
Trigger: GCCGTCTAGTGGACCTGGTCAACGCCAGCTTCGGCA...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCGCGGCTTCATGTCCATaGGCTGCAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAAASCP*AARRPG
Trigger: CCCTGGCCTTCTTGCAGCGCATGGACATGAAGCCGC...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCTCTCCACCGAGACGATaGCGCCGTAGCTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGSPPRR*RRSWHG
Trigger: CCCATGCCAGCTACGGCGGCATCGTCTCGGTGGAGA...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCGACTCCAGGCACCACTaGAGCAGGTCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGDSRHH*SRSVST
Trigger: GGTGGAGACAGACCTGCTGCAGTGGTGCCTGGAGTC...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCCCAGCTTGTCCAGGCTaGGCACCCGTAGCATTCGCT +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAPACPG*APVAFA
Trigger: AGCGAATGCTACGGGTGCGCAGCCTGGACAAGCTGG...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCATGACGGCCGAGGAGTaGTGGGGCAGGCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPMTAEE*WGRRLS
Trigger: GCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTCAT...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAAGGTCTGGAACTGCGTaGGCCAGTGGCGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSRSGTA*ASGAPP
Trigger: GGGAGGCGCGCCACTGGCTCACGCAGTTCCAGACCT...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCGCCCTGCTGGCACTTaGGCACCTCCTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPRPAGT*APPRPP
Trigger: AGGTGGACGAGGAGGTGCTCAAGTGCCAGCAGGGCG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCTTACTCAGGACCTTATaGCTGCTGTCGCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGLLRTL*LLSRRP
Trigger: CGGCCTGCGCGACAGCAGTCATAAGGTCCTGAGTAA...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTTTCGCTCGGCGTTCTTaGACAGGGTCCCGGACCCCT +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPFARRS*TGSRTP
Trigger: AGGGGTCCGGGACCCTGTTCAAGAACGCCGAGCGAA...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCCAGGTAGTCGTCCCTaGGCTTCTTGCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGPGSRP*ASCRSW
Trigger: CCAGCTTCGGCAAGAAGCTCAGGGACGACTACCTGG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCGTCCCTTGGCGTGGTTaGCCAACTCATAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAVPWRG*PTHRSP
Trigger: GGGACTCCTATGAGTTGGTCAACCACGCCAAGGGAC...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCGTCTACCAGCACCTTaGAGCTCTTGGCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGRLPAP*SSWPAA
Trigger: CGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGGCACAGGATGGGGATaGTGCCCGACTCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPGTGWG*CPTPGT
Trigger: GGTGCCTGGAGTCGGGCAGCATCCCCATCCTGTGCC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTGTCCAGGTACGGGGTaGCCCCCAGGACGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSCPGTG*PPGRAP
Trigger: TGGAGCCCGTCCTGGGGGGCACCCCGTACCTGGACA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCAGCCTGTGGCTGGCTaGCTGGGGTCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPQPVAG*LGSCPA
Trigger: AGCTGGGCATGACCCCAGGCAGCCAGCCACAGGCTG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCGCCCGAAGGAGGCTCTaGGGACTCGTGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFARRRL*GLVGHR
Trigger: CCGGTGCCCCACGAGTCCCCAGAGCCTCCTTCGGGC...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAAACTGCGTGAGCCAGTaGCGCGCCTCCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSNCVSQ*RASPGL
Trigger: CAGCCCTGGGGAGGCGCGCCACTGGCTCACGCAGTT...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTGCACCTTGCAGCTCTTaGCCAGCTGCGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPAPCSS*PAAPWP
Trigger: AGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGC...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCTCCACTAGACGGCCCTaGTCCAGCTTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGSTRRP*SSLSRL
Trigger: CAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGA...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTATCTGGCCGGAGCCTTaGCCCTGGCGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSIWPEP*PWRLEL
Trigger: GAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGAT...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGGCTTGTCCGCGGAGTaGTGGCAGGTCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPGLSAE*WQVWNC
Trigger: GCAGTTCCAGACCTGCCATCACTCCGCGGACAAGCC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCACCTCGTCCACCTCGATaGCGGCGAAGGGCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSPRPPR*RRRACP
Trigger: CGGACAAGCCCTTCGCCGTCATCGAGGTGGACGAGG...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCTCAGAAGCTGGCTTGTaGAAGGAGTCTGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRASEAGL*KESGSP
Trigger: GGGACTGCCAGACTCCTTTCACAAGCCAGCTTCTGA...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCACGACAACCAACTCTTaGCCCCCAAGAGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGTTTNS*PPRVAV
Trigger: GACTGCCACTCTTGGGGGGCAAGAGTTGGTTGTCGT...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293404.8
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCCGGGGCTACAGCAGCTaGCCGCAGAACCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPRGYSS*PQNHSH
Trigger: ATGGCTGTGGTTCTGCGGGCAGCTGCTGTAGCCCCG...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293404.8
CDS-3UTR CCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCGGCTCTGGGGACTCGTaGGGCACCGGGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSGSGDS*GTGGLG
Trigger: TCCCAGGCCCCCGGTGCCCCACGAGTCCCCAGAGCC...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTTGGTTCAGGAAGGCCTaGATGTCCCGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPWFRKA*MSRCTS
Trigger: GCTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCA...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCTGGCCCCGCACTaGTTCAGGAAGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSGLAPH*FRKAWM
Trigger: CATCCAGGCCTTCCTGAACCAGTGCGGGGCCAGCCC...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAACTGCGTGAGCCAGTaGCGCGCCTCCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFNCVSQ*RASPGL
Trigger: CAGCCCTGGGGAGGCGCGCCACTGGCTCACGCAGTT...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGCACCTTGCAGCTCTTaGCCAGCTGCGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPAPCSS*PAAPWP
Trigger: AGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCACACTCCCACAGCATCTaGCCGGAGCCTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSHSHSI*PEPWPW
Trigger: CCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTG...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
3UTR CAA 72 bp GTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTaGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGVLDWSPSFLC*SHFSASSGQSW
Trigger: CCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTTCGCTCGGCGTTCTTaGACAGGGTCCCGGACCCCT +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSFARRS*TGSRTP
Trigger: AGGGGTCCGGGACCCTGTTCAAGAACGCCGAGCGAA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTCGCCAGAAAAGTGTCTaGAGGTCCCGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSRQKSV*RSRRRH
Trigger: GTGCCTGCGGCGGGACCTTCAGACACTTTTCTGGCG...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAGACTGGATACGCCCTaGTGGCACTTGAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPRLDTP*WHLSTS
Trigger: GGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAGTCT...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCTTCATGTCCATGCGCTaGAAGAAGGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAFMSMR*KKARAK
Trigger: CTTTGCCCTGGCCTTCTTGCAGCGCATGGACATGAA...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCCGTCTACCAGCACCTTaGAGCTCTTGGCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPRLPAP*SSWPAA
Trigger: CGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACG...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTCTCCACCGAGACGATaGCGCCGTAGCTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSSPPRR*RRSWHG
Trigger: CCCATGCCAGCTACGGCGGCATCGTCTCGGTGGAGA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCACAGGATGGGGATGCTaGCCGACTCCAGGCACCACT +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPTGWGC*PTPGTT
Trigger: AGTGGTGCCTGGAGTCGGGCAGCATCCCCATCCTGT...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTCACCCACTCGGCGTTaGACACCAGGTCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSSPTRR*TPGPGR
Trigger: CCGACCTGGACCTGGTGTGCAACGCCGAGTGGGTGA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTATGGTGAGGGTCAGCTaGCTGGGTCAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPMVRVS*LGQKLA
Trigger: AGCCAGCTTCTGACCCAGGCAGCTGACCCTCACCAT...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTGGTTCAGGAAGGCCTaGATGTCCCGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPWFRKA*MSRCTS
Trigger: GCTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCA...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCGGGCTGGCCCCGCACTaGTTCAGGAAGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFGLAPH*FRKAWM
Trigger: CATCCAGGCCTTCCTGAACCAGTGCGGGGCCAGCCC...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGCGCCTCCCCAGGGCTaGCCCCGCACTGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWAPPQG*PRTGSG
Trigger: TCCTGAACCAGTGCGGGGCCAGCCCTGGGGAGGCGC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTCGATGGGGCACAGGATaGGGATGCTGCCCGACTCCA +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSRWGTG*GCCPTP
Trigger: TGGAGTCGGGCAGCATCCCCATCCTGTGCCCCATCG...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCCCTCGGAGACGTAGATaGAGTGCAGCCGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFPRRRR*SAAAGA
Trigger: TGCGCCCGCGGCTGCACTCCATCTACGTCTCCGAGG...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCCTTGTGAAAGGAGTCTaGCAGTCCCTTGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRALVKGV*QSLGVV
Trigger: AACCACGCCAAGGGACTGCCAGACTCCTTTCACAAG...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCATGCCCAGCTGGCATaGCTTTTGGTCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPHAQLA*LLVHPG
Trigger: GCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCGCTCCATGGTCAGAATaGCGGCGGCGTTGTACCTGG +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPAPWSE*RRRCTW
Trigger: CCAGGTACAACGCCGCCGCCATTCTGACCATGGAGC...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCAGACTGGATACGCCCTaGTGGCACTTGAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPRLDTP*WHLSTS
Trigger: GGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAGTCT...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCACGATGAGCCGCATCTaGTGCCGTTCTTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGTMSRI*CRSFVL
Trigger: GAGCACAAAAGAACGGCAGCAGATGCGGCTCATCGT...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTCCAGCTTGTCCAGGCTaGGCACCCGTAGCATTCGCT +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSPACPG*APVAFA
Trigger: AGCGAATGCTACGGGTGCGCAGCCTGGACAAGCTGG...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTGTCCAGGTACGGGGTaGCCCCCAGGACGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWCPGTG*PPGRAP
Trigger: TGGAGCCCGTCCTGGGGGGCACCCCGTACCTGGACA...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGGGCAGAGCTGGGGCTaGTTTCTCCTCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPGQSWG*FLLCRS
Trigger: TGATCTGCAGAGGAGAAAGCAGCCCCAGCTCTGCCC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTGGCCAGCTGCGCCTTaGCCTCCCAGAAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSWPAAP*PPRRKD
Trigger: GTCTTTCCTTCTGGGAGGCCAAGGCGCAGCTGGCCA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGCGGCCGTCTCCCCGATaGGGCACAGGATGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWRPSPR*GTGWGC
Trigger: GCATCCCCATCCTGTGCCCCATCGGGGAGACGGCCG...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGATGACGGCCGAGGAGTaGTGGGGCAGGCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWMTAEE*WGRRLS
Trigger: GCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTCAT...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTCCACTAGACGGCCCTaGTCCAGCTTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSSTRRP*SSLSRL
Trigger: CAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCATTACTCAGGACCTTATaGCTGCTGTCGCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSLLRTL*LLSRRP
Trigger: CGGCCTGCGCGACAGCAGTCATAAGGTCCTGAGTAA...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCTCAGAAGCTGGCTTGTaGAAGGAGTCTGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPSEAGL*KESGSP
Trigger: GGGACTGCCAGACTCCTTTCACAAGCCAGCTTCTGA...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTATGAGCCGCATCTGCTaGCGTTCTTTTGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPMSRIC*RSFVLT
Trigger: GGTGAGCACAAAAGAACGGCAGCAGATGCGGCTCAT...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAATGGTGAGGGTCAGCTaGCTGGGTCAGAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSMVRVS*LGQKLA
Trigger: AGCCAGCTTCTGACCCAGGCAGCTGACCCTCACCAT...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCCAGCCTGTGGCTGGCTaGCTGGGGTCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSQPVAG*LGSCPA
Trigger: AGCTGGGCATGACCCCAGGCAGCCAGCCACAGGCTG...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCCTGGATACGCCCTGCTaGCACTTGAGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFLDTPC*HLSTSS
Trigger: CGAGGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAG...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCCTTGGCCCTGGCGGCTaGAGCTCACCACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPLGPGG*SSPQIC
Trigger: ACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAG...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCCACTCCCACAGCATCTaGCCGGAGCCTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSHSHSI*PEPWPW
Trigger: CCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTG...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCAGCTGGCATGGCTTTTaGTCCACCCTGGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPSWHGF*STLAIP
Trigger: TGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCT...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGTTGGGGTCCTAGACTaGTCCCCTTCTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPVGVLD*SPSFLC
Trigger: GCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAAC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGGCTTGTCCGCGGAGTaGTGGCAGGTCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWGLSAE*WQVWNC
Trigger: GCAGTTCCAGACCTGCCATCACTCCGCGGACAAGCC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCACGATGAGCCGCATCTaGTGCCGTTCTTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPTMSRI*CRSFVL
Trigger: GAGCACAAAAGAACGGCAGCAGATGCGGCTCATCGT...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCTTGTGAAAGGAGTCTaGCAGTCCCTTGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPLVKGV*QSLGVV
Trigger: AACCACGCCAAGGGACTGCCAGACTCCTTTCACAAG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAGTTGGGGTCCTAGACTaGTCCCCTTCTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSVGVLD*SPSFLC
Trigger: GCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAAC...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCCCAGGTAGTCGTCCCTaGGCTTCTTGCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSPGSRP*ASCRSW
Trigger: CCAGCTTCGGCAAGAAGCTCAGGGACGACTACCTGG...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGCGGCTTCATGTCCATaGGCTGCAAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWAASCP*AARRPG
Trigger: CCCTGGCCTTCTTGCAGCGCATGGACATGAAGCCGC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGACTCCAGGCACCACTaGAGCAGGTCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWDSRHH*SRSVST
Trigger: GGTGGAGACAGACCTGCTGCAGTGGTGCCTGGAGTC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGACAGGATGGGGATGCTaGCCGACTCCAGGCACCACT +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWTGWGC*PTPGTT
Trigger: AGTGGTGCCTGGAGTCGGGCAGCATCCCCATCCTGT...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCAGGACCTTATGACTaGTGTCGCGCAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWSGPYD*CRAGRL
Trigger: CAGGCGGCCTGCGCGACAGCAGTCATAAGGTCCTGA...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCAATGAGCCGCATCTGCTaGCGTTCTTTTGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: RAGAAFSSADHSANKPPSMSRIC*RSFVLT
Trigger: GGTGAGCACAAAAGAACGGCAGCAGATGCGGCTCAT...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGGCTGCCTGGGGTCATaGCCAGCTGGCATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWGCLGS*PAGMAF
Trigger: AAAAGCCATGCCAGCTGGGCATGACCCCAGGCAGCC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTGGCCAGCTGCGCCTTaGCCTCCCAGAAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWWPAAP*PPRRKD
Trigger: GTCTTTCCTTCTGGGAGGCCAAGGCGCAGCTGGCCA...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAACGGCCGAGGAGTGGTaGGGCAGGCGGCTGAGCACG +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKTAEEW*GRRLST
Trigger: CGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGT...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGCTCCATGGTCAGAATaGCGGCGGCGTTGTACCCCT +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWAPWSE*RRRCTP
Trigger: AGGGGTACAACGCCGCCGCCATTCTGACCATGGAGC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293404.8
CDS-3UTR CCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGCATGCCCAGCTGGCATaGCTTTTGGTCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWHAQLA*LLVHPG
Trigger: GCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATG...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGTCCCTTGGCGTGGTTaGCCAACTCATAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWVPWRG*PTHRSP
Trigger: GGGACTCCTATGAGTTGGTCAACCACGCCAAGGGAC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGCTGCCGTTCTTTTGTaGTCACCCACTCGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWAAVLL*SPTRRC
Trigger: GCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAATCTGGCCGGAGCCTTaGCCCTGGCGGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKIWPEP*PWRLEL
Trigger: GAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGAT...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTTTAATCAAGGCCTCCTaGAAAACTGCAAGACCCAAA +
Preference number: 4 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPLIKAS*KTARPK
Trigger: TTTGGGTCTTGCAGTTTTTCAGGAGGCCTTGATTAA...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCAGCTGGCATGGCTTTTaGTCCACCCTGGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSSWHGF*STLAIP
Trigger: TGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCT...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAACGCCAGAAAAGTGTCTaGAGGTCCCGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKRQKSV*RSRRRH
Trigger: GTGCCTGCGGCGGGACCTTCAGACACTTTTCTGGCG...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR TCA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCTTAATCAAGGCCTCCTaGAAAACTGCAAGACCCAAA +
Preference number: 4 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPLIKAS*KTARPK
Trigger: TTTGGGTCTTGCAGTTTTTCAGGAGGCCTTGATTAA...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCCAGAAGAAGATCCACTaGTTGTTGGAGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFQKKIH*LLEKLP
Trigger: TGGCAGCTTCTCCAACAAGCAGTGGATCTTCTTCTG...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAATCAGGACCTTATGACTaGTGTCGCGCAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKSGPYD*CRAGRL
Trigger: CAGGCGGCCTGCGCGACAGCAGTCATAAGGTCCTGA...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAGGCTGCCTGGGGTCATaGCCAGCTGGCATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKGCLGS*PAGMAF
Trigger: AAAAGCCATGCCAGCTGGGCATGACCCCAGGCAGCC...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAACTGGATACGCCCTGCTaGCACTTGAGCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKLDTPC*HLSTSS
Trigger: CGAGGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAG...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAGGGGTCATGCCCAGCTaGCATGGCTTTTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKGVMPS*HGFWST
Trigger: GGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCC...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAGCTGCCGTTCTTTTGTaGTCACCCACTCGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKAAVLL*SPTRRC
Trigger: GCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGC...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCCAGAAGAAGATCCACTaGTTGTTGGAGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSQKKIH*LLEKLP
Trigger: TGGCAGCTTCTCCAACAAGCAGTGGATCTTCTTCTG...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAGGGCAGAGCTGGGGCTaGTTTCTCCTCTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKGQSWG*FLLCRS
Trigger: TGATCTGCAGAGGAGAAAGCAGCCCCAGCTCTGCCC...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR GCA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCTCAGACAAGTATTTaGATTTTAATCAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPSQTSI*ILIKAS
Trigger: GGAGGCCTTGATTAAAATGCAAATACTTGTCTGAGA...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293404.8
CDS-3UTR CCA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAACTTGGCCCTGGCGGCTaGAGCTCACCACAAATTTGT +
Preference number: 4 (lower is better)
Translates to: MVEYHAGRGIILGKGASKLGPGG*SSPQIC
Trigger: ACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAG...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp GACTGGGAGACGTCGTCCGCGCCCGCGTACTCCTCGGGCGGGGGCTaGGGCTGCGACCAGGCGGTGCTGAGCCGGCGCCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DWETSSAPAYSSGGG*GCDQAVLSRRPGLV
Trigger: CACCAGCCCGGGGCGCCGGCTCAGCACCGCCTGGTCGCAGCCCCAGCCCCCGCCCGAGGAGTACGCGGGCGCGGACGACGTCTCCCAGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp GGCCTGGGACTCGGCACCCACGACGGCTCCTCGGCGACGGGCGACTaGGAGACGTCGTCCGCGCCCGCGTACTCCTCGGGCGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGLGTHDGSSATGD*ETSSAPAYSSGGGW
Trigger: CCAGCCCCCGCCCGAGGAGTACGCGGGCGCGGACGACGTCTCCCAGTCGCCCGTCGCCGAGGAGCCGTCGTGGGTGCCGAGTCCCAGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp AACTGCGTGAGCCAGTGGCGCGCCTCCCCAGGGCTGGCCCCGCACTaGTTCAGGAAGGCCTGGATGTCCCGCTGCACCAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: NCVSQWRASPGLAPH*FRKAWMSRCTSERP
Trigger: GGGCCGCTCGCTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGCGGGGCCAGCCCTGGGGAGGCGCGCCACTGGCTCACGCAGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp CCAGGGAGTCGAGAAGCACGGAGCGGCGCGCGGCCGTCTCCCCGATaGGGCACAGGATGGGGATGCTGCCCGACTCCAGGCACCACTGCA +
Preference number: 5 (lower is better)
Translates to: PGSREARSGARPSPR*GTGWGCCPTPGTTA
Trigger: TGCAGTGGTGCCTGGAGTCGGGCAGCATCCCCATCCTGTGCCCCATCGGGGAGACGGCCGCGCGCCGCTCCGTGCTTCTCGACTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS TCA 90 bp CGGCGAAGGGCTTGTCCGCGGAGTGATGGCAGGTCTGGAACTGCGTaGGCCAGTGGCGCGCCTCCCCAGGGCTGGCCCCGCACTGGTTCA +
Preference number: 5 (lower is better)
Translates to: RRRACPRSDGRSGTA*ASGAPPQGWPRTGS
Trigger: TGAACCAGTGCGGGGCCAGCCCTGGGGAGGCGCGCCACTGGCTCACGCAGTTCCAGACCTGCCATCACTCCGCGGACAAGCCCTTCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp GAAGCACGGAGCGGCGCGCGGCCGTCTCCCCGATGGGGCACAGGATaGGGATGCTGCCCGACTCCAGGCACCACTGCAGCAGGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: EARSGARPSPRWGTG*GCCPTPGTTAAGLS
Trigger: AGACAGACCTGCTGCAGTGGTGCCTGGAGTCGGGCAGCATCCCCATCCTGTGCCCCATCGGGGAGACGGCCGCGCGCCGCTCCGTGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp CCCCCAGGACGGGCTCCATGGTCAGAATGGCGGCGGCGTTGTACCTaGCGCAGCGGGAGAGCGGCAGGCCCTCGGAGACGTAGATGGAGT +
Preference number: 5 (lower is better)
Translates to: PPGRAPWSEWRRRCT*RSGRAAGPRRRRWS
Trigger: ACTCCATCTACGTCTCCGAGGGCCTGCCGCTCTCCCGCTGCGCCAGGTACAACGCCGCCGCCATTCTGACCATGGAGCCCGTCCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS GCA 90 bp GGGGCCGGCAGCCCCAGGACCACCAGCGGCTTCATGTCCATGCGCTaGAAGAAGGCCAGGGCAAAGGCCAGACTGGATACGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAGSPRTTSGFMSMR*KKARAKARLDTPCW
Trigger: CCAGCAGGGCGTATCCAGTCTGGCCTTTGCCCTGGCCTTCTTGCAGCGCATGGACATGAAGCCGCTGGTGGTCCTGGGGCTGCCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 90 bp TCAGTGAGCAGCGTGCTAGCGGCGGTGATGACGGCCGAGGAGTGGTaGGGCAGGCGGCTGAGCACGTCCACGATGAGCCGCATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SVSSVLAAVMTAEEW*GRRLSTSTMSRICC
Trigger: GCAGCAGATGCGGCTCATCGTGGACGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTCATCACCGCCGCTAGCACGCTGCTCACTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 90 bp AGCTCAGTGAGCAGCGTGCTAGCGGCGGTGATGACGGCCGAGGAGTaGTGGGGCAGGCGGCTGAGCACGTCCACGATGAGCCGCATCTGC +
Preference number: 5 (lower is better)
Translates to: SSVSSVLAAVMTAEE*WGRRLSTSTMSRIC
Trigger: GCAGATGCGGCTCATCGTGGACGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTCATCACCGCCGCTAGCACGCTGCTCACTGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 90 bp TCCCGCCGCAGGCACTCCCACAGCATCTGGCCGGAGCCTTGGCCCTaGCGGCTGGAGCTCACCACAAATTTGTCCAGGTACGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SRRRHSHSIWPEPWP*RLELTTNLSRYGVP
Trigger: GGGCACCCCGTACCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTGCCTGCGGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS-3UTR CAA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTGTGGGCCGCAGCGCCTaGGCCAGCGACGCGGTCACC +
Preference number: 5 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPVGRSA*ASDAVT
Trigger: GGTGACCGCGTCGCTGGCCAAGGCGCTGCGGCCCAC...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCGGCCCTGGTCCAGCTaGTCCAGGCTGCGCACCCGT +
Preference number: 5 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGRPWSS*SRLRTR
Trigger: ACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCG...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCCATCTGGCCGGAGCCTaGGCCCTGGCGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAHLAGA*ALAAGA
Trigger: AGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATG...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS TCA 90 bp ACCTCCTCGTCCACCTCGATGACGGCGAAGGGCTTGTCCGCGGAGTaGTGGCAGGTCTGGAACTGCGTGAGCCAGTGGCGCGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TSSSTSMTAKGLSAE*WQVWNCVSQWRASP
Trigger: TGGGGAGGCGCGCCACTGGCTCACGCAGTTCCAGACCTGCCATCACTCCGCGGACAAGCCCTTCGCCGTCATCGAGGTGGACGAGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS GCA 90 bp GGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCCAGGTACGGGGTaGCCCCCAGGACGGGCTCCATGGTCAGAATGGCGGCGGCGTTGT +
Preference number: 5 (lower is better)
Translates to: GPGGWSSPQICPGTG*PPGRAPWSEWRRRC
Trigger: ACAACGCCGCCGCCATTCTGACCATGGAGCCCGTCCTGGGGGGCACCCCGTACCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS-3UTR CAA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCAGCACCTTGCAGCTCTaGGCCAGCTGCGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGSTLQL*ASCALA
Trigger: GGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCT...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTCGGCCCTGGTCCAGCTaGTCCAGGCTGCGCACCCGT +
Preference number: 5 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPRPWSS*SRLRTR
Trigger: ACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCG...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS TCA 90 bp CAGGGATTGATGGGGTTGGTGACCCGGGAGCGCCAGAAAAGTGTCTaGAGGTCCCGCCGCAGGCACTCCCACAGCATCTGGCCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QGLMGLVTRERQKSV*RSRRRHSHSIWPEP
Trigger: AGGCTCCGGCCAGATGCTGTGGGAGTGCCTGCGGCGGGACCTTCAGACACTTTTCTGGCGCTCCCGGGTCACCAACCCCATCAATCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 90 bp TGGTGGGGCAGGCGGCTGAGCACGTCCACGATGAGCCGCATCTGCTaGCGTTCTTTTGTGCTCACCCACTCGGCGTTGCACACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WWGRRLSTSTMSRIC*RSFVLTHSALHTRS
Trigger: GGACCTGGTGTGCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGATGCGGCTCATCGTGGACGTGCTCAGCCGCCTGCCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 90 bp AGCTTCTTGCCGAAGCTGGCGTTGACCAGGTCCACTAGACGGCCCTaGTCCAGCTTGTCCAGGCTGCGCACCCGTAGCATTCGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: SFLPKLALTRSTRRP*SSLSRLRTRSIRSA
Trigger: CGCCGAGCGAATGCTACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGACCTGGTCAACGCCAGCTTCGGCAAGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS-3UTR CAA 90 bp CTGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCGCGTCTACCAGCACCTaGCAGCTCTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGSCPAGMAFGPPWPFQGASTST*QLLASC
Trigger: GCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGC...GCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCACAGCAGCGGCGGCGTaGTGTCGAAGCGCGTCTACC +
Preference number: 5 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGTAAAA*CRSAST
Trigger: GGTAGACGCGCTTCGACACAACGCCGCCGCTGCTGT...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCATCTGGCCGGAGCCTaGGCCCTGGCGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPHLAGA*ALAAGA
Trigger: AGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCCAGGGATTGATGGGGTaGGTGACCCGGGAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGQGLMG*VTRERQ
Trigger: CTGGCGCTCCCGGGTCACCAACCCCATCAATCCCTG...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTGCGTCTACCAGCACCTaGCAGCTCTTGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPASTST*QLLASC
Trigger: GCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGC...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCTCTGCTGCCGTTCTTTaGTGCTCACCCACTCGGCGT +
Preference number: 5 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRASAAVL*CSPTRR
Trigger: ACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGA...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCGAGCTCACCACAAATTaGTCCAGGTACGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAELTTN*SRYGVP
Trigger: GGGCACCCCGTACCTGGACAAATTTGTGGTGAGCTC...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCAGGGATTGATGGGGTaGGTGACCCGGGAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPQGLMG*VTRERQ
Trigger: CTGGCGCTCCCGGGTCACCAACCCCATCAATCCCTG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCGAGTCTGGCAGTCCCTaGGCGTGGTTGACCAACTCA +
Preference number: 5 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAESGSP*AWLTNS
Trigger: TGAGTTGGTCAACCACGCCAAGGGACTGCCAGACTC...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TGGGGTCATGCCCAGCTGGCATGGCTTTTGGTCCACCCTGGCCATTCCAGGGCCCCTTCTTTCCTGTGCTaGTCCCACTTCAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: WGHAQLAWLLVHPGHSRAPSFLC*SHFSAS
Trigger: GGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG...GGCCCTGGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTGGGCATGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCATTCGCTCGGCGTTCTaGAACAGGGTCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPIRSAF*NRVPDP
Trigger: GGGGTCCGGGACCCTGTTCAAGAACGCCGAGCGAAT...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTCAGCTGGCATGGCTTTaGGTCCACCCTGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: SPLGLVLSRALEGTLPSPQLAWL*VHPGHS
Trigger: GGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTG...AGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS GCA 90 bp ACCCTGGCCATTCCAGGGCCTGTAGTGTCCATGGTGAGGGTCAGCTaGCTGGGTCAGAAGCTGGCTTGTGAAAGGAGTCTGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: TLAIPGPVVSMVRVS*LGQKLACERSLAVP
Trigger: AGGGACTGCCAGACTCCTTTCACAAGCCAGCTTCTGACCCAGGCAGCTGACCCTCACCATGGACACTACAGGCCCTGGAATGGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS-3UTR CAA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCGTCCCTGAGCTTCTaGCCGAAGCTGGCGTTGACC +
Preference number: 5 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPSSLSF*PKLALT
Trigger: GGTCAACGCCAGCTTCGGCAAGAAGCTCAGGGACGA...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCCAGCTGGCATGGCTTTaGGTCCACCCTGGCCATTCC +
Preference number: 5 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPQLAWL*VHPGHS
Trigger: GGAATGGCCAGGGTGGACCAAAAGCCATGCCAGCTG...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCTGCTGCCGTTCTTTaGTGCTCACCCACTCGGCGT +
Preference number: 5 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPSAAVL*CSPTRR
Trigger: ACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGA...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCATTCGCTCGGCGTTCTaGAACAGGGTCCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFIRSAF*NRVPDP
Trigger: GGGGTCCGGGACCCTGTTCAAGAACGCCGAGCGAAT...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCATTGCCGAAGCTGGCGTaGACCAGGTCCACTAGACGG +
Preference number: 5 (lower is better)
Translates to: RAGAAFSSADHSANKPPSLPKLA*TRSTRR
Trigger: CCGTCTAGTGGACCTGGTCAACGCCAGCTTCGGCAA...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCGAGTCTGGCAGTCCCTaGGCGTGGTTGACCAACTCA +
Preference number: 5 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPESGSP*AWLTNS
Trigger: TGAGTTGGTCAACCACGCCAAGGGACTGCCAGACTC...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCAGAATGGCGGCGGCGTaGTACCTGGCGCAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSRMAAA*YLAQRE
Trigger: CTCCCGCTGCGCCAGGTACAACGCCGCCGCCATTCT...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS-3UTR CAA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGAGCACCTTGCAGCTCTaGGCCAGCTGCGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWSTLQL*ASCALA
Trigger: GGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCT...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAGTGGGCCGCAGCGCCTaGGCCAGCGACGCGGTCACC +
Preference number: 5 (lower is better)
Translates to: MVEYHAGRGIILGKGASKVGRSA*ASDAVT
Trigger: GGTGACCGCGTCGCTGGCCAAGGCGCTGCGGCCCAC...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTTGAGGAAGATGATTTaGGTGGGCCGCAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPLRKMI*VGRSAL
Trigger: CAAGGCGCTGCGGCCCACCAAAATCATCTTCCTCAA...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGTCCCGGACCCCTTGTaGCTAAAGAGCTCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSVPDPL*LKSSVS
Trigger: GCTCACTGAGCTCTTTAGCAACAAGGGGTCCGGGAC...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTAGGGTCCCGGACCCCTaGTTGCTAAAGAGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSRVPDP*LLKSSV
Trigger: CACTGAGCTCTTTAGCAACAAGGGGTCCGGGACCCT...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCTTGCCGAAGCTGGCGTaGACCAGGTCCACTAGACGG +
Preference number: 5 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFLPKLA*TRSTRR
Trigger: CCGTCTAGTGGACCTGGTCAACGCCAGCTTCGGCAA...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGAGCTGGGGCTGCTTTCTCCTCTGCAGATCACTCAGCCAACAAGCCCCCTTCACCTTCTTTCCTGTGCTaGTCCCACTTCAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RAGAAFSSADHSANKPPSPSFLC*SHFSAS
Trigger: GGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG...TGAAGGGGGCTTGTTGGCTGAGTGATCTGCAGAGGAGAAAGCAGCCCCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCGTCCCGGACCCCTTGTaGCTAAAGAGCTCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFVPDPL*LKSSVS
Trigger: GCTCACTGAGCTCTTTAGCAACAAGGGGTCCGGGAC...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTTTGAAGTACCAGGGATaGATGGGGTTGGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSLKYQG*MGLVTR
Trigger: CCGGGTCACCAACCCCATCAATCCCTGGTACTTCAA...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTGGGCAGAGCTGGGGCAAGAAGATCCACTGCTaGTTGGAGAAGCTGCCATCA +
Preference number: 5 (lower is better)
Translates to: PSFLCLSHFSASSGQSWGKKIHC*LEKLPS
Trigger: TGATGGCAGCTTCTCCAACAAGCAGTGGATCTTCTT...GCCCCAGCTCTGCCCAGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS TCA 90 bp CAGAAGCTGGCTTGTGAAAGGAGTCTGGCAGTCCCTTGGCGTGGTTaGCCAACTCATAGGAGTCCCGGATATCAGCCAGGCCAAACCAGA +
Preference number: 5 (lower is better)
Translates to: QKLACERSLAVPWRG*PTHRSPGYQPGQTR
Trigger: TCTGGTTTGGCCTGGCTGATATCCGGGACTCCTATGAGTTGGTCAACCACGCCAAGGGACTGCCAGACTCCTTTCACAAGCCAGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS-3UTR CAA 90 bp AGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTCCTCGTCCCTGAGCTTCTaGCCGAAGCTGGCGTTGACC +
Preference number: 5 (lower is better)
Translates to: RPFGCSFRVSRVGVLDWSSSLSF*PKLALT
Trigger: GGTCAACGCCAGCTTCGGCAAGAAGCTCAGGGACGA...GGACCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCTTGAAGTACCAGGGATaGATGGGGTTGGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFLKYQG*MGLVTR
Trigger: CCGGGTCACCAACCCCATCAATCCCTGGTACTTCAA...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp TTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCTCCCCTAATCCCAGGCCGCCTGTGTTATaGAGGAAGATGATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LGLVLSRALEGTLPSPNPRPPVL*RKMILV
Trigger: CACCAAAATCATCTTCCTCAATAACACAGGCGGCCT...GGGATTAGGGGAGGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGAGGGTCCCGGACCCCTaGTTGCTAAAGAGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWRVPDP*LLKSSV
Trigger: CACTGAGCTCTTTAGCAACAAGGGGTCCGGGACCCT...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGGAGCTCACCACAAATTaGTCCAGGTACGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWELTTN*SRYGVP
Trigger: GGGCACCCCGTACCTGGACAAATTTGTGGTGAGCTC...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp ACTAGCTCACCCTTAGGGTTAGTCCTGAGTAGAGCCCTGGAAGGCACCCTCCCCGGCAGGGGTATTATTTaGGGTAAGGGAGCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TSSPLGLVLSRALEGTLPGRGII*GKGASK
Trigger: TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCC...GGGGAGGGTGCCTTCCAGGGCTCTACTCAGGACTAACCCTAAGGGTGAGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGTTGAGGAAGATGATTTaGGTGGGCCGCAGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWLRKMI*VGRSAL
Trigger: CAAGGCGCTGCGGCCCACCAAAATCATCTTCCTCAA...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAAGATCCACTGCTTGTaGGAGAAGCTGCCATCACTG +
Preference number: 5 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFKIHCL*EKLPSL
Trigger: CAGTGATGGCAGCTTCTCCAACAAGCAGTGGATCTT...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp GTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCAGCGCCTCCTCTAAGAAGATCCACTGCTaGTTGGAGAAGCTGCCATCA +
Preference number: 5 (lower is better)
Translates to: VLDWSPSFLCLSHFSASSKKIHC*LEKLPS
Trigger: TGATGGCAGCTTCTCCAACAAGCAGTGGATCTTCTT...AGAGGAGGCGCTGAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp AGTCGAGTTGGGGTCCTAGACTGGTCCCCTTCTTTCCTGTGCTTGTCCCACTTCCTGCCATCACTGTGTTaGAAGTACCAGGGATTGATG +
Preference number: 5 (lower is better)
Translates to: SRVGVLDWSPSFLCLSHFLPSLC*KYQGLM
Trigger: CATCAATCCCTGGTACTTCAAACACAGTGATGGCAG...GAAGTGGGACAAGCACAGGAAAGAAGGGGACCAGTCTAGGACCCCAACTCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGAAGATCCACTGCTTGTaGGAGAAGCTGCCATCACTG +
Preference number: 5 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWKIHCL*EKLPSL
Trigger: CAGTGATGGCAGCTTCTCCAACAAGCAGTGGATCTT...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp CGAAGGCCATTTGGTTGTAGCTTTAGAGTGAGTCGAGTTGGGGTCCTAGACTGGAGGCCGCCTGTGTTATaGAGGAAGATGATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: RRPFGCSFRVSRVGVLDWRPPVL*RKMILV
Trigger: CACCAAAATCATCTTCCTCAATAACACAGGCGGCCT...CCAGTCTAGGACCCCAACTCGACTCACTCTAAAGCTACAACCAAATGGCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS TCA 90 bp ACAGGCGCTGGTGGGACAATTTCCGTCTTTGGGAGACCTCCACAGTaGAATGATTTCAGTGGTCTGCATAGATTTGTCTGTGATTTTCAT +
Preference number: 5 (lower is better)
Translates to: TGAGGTISVFGRPPQ*NDFSGLHRFVCDFH
Trigger: ATGAAAATCACAGACAAATCTATGCAGACCACTGAAATCATTTCACTGTGGAGGTCTCCCAAAGACGGAAATTGTCCCACCAGCGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592915.1
CDS-3UTR CAA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAACTGCCATCACTGTGTTaGAAGTACCAGGGATTGATG +
Preference number: 5 (lower is better)
Translates to: MVEYHAGRGIILGKGASKLPSLC*KYQGLM
Trigger: CATCAATCCCTGGTACTTCAAACACAGTGATGGCAG...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS-3UTR CAA 90 bp ATGGTAGAATATCACGCAGGCAGGGGTATTATTTTGGGTAAGGGAGCCTCAAAAGGCAGGGGTATTATTTaGGGTAAGGGAGCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: MVEYHAGRGIILGKGASKGRGII*GKGASK
Trigger: TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCC...TTTTGAGGCTCCCTTACCCAAAATAATACCCCTGCCTGCGTGATATTCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS GCA 90 bp TTTCCGTCTTTGGGAGACCTCCACAGTGAAATGATTTCAGTGGTCTaGATAGATTTGTCTGTGATTTTCATTCAAGGAGATGCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FPSLGDLHSEMISVV*IDLSVIFIQGDAFP
Trigger: GGGGAAAGCATCTCCTTGAATGAAAATCACAGACAAATCTATGCAGACCACTGAAATCATTTCACTGTGGAGGTCTCCCAAAGACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592915.1
CDS CCA 72 bp CTCGGCACCCACGACGGCTCCTCGGCGACGGGCGACTaGGAGACGTCGTCCGCGCCCGCGTACTCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: LGTHDGSSATGD*ETSSAPAYSSG
Trigger: GCCCGAGGAGTACGCGGGCGCGGACGACGTCTCCCAGTCGCCCGTCGCCGAGGAGCCGTCGTGGGTGCCGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 72 bp CGAGAAGCACGGAGCGGCGCGCGGCCGTCTCCCCGATaGGGCACAGGATGGGGATGCTGCCCGACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: REARSGARPSPR*GTGWGCCPTPG
Trigger: GCCTGGAGTCGGGCAGCATCCCCATCCTGTGCCCCATCGGGGAGACGGCCGCGCGCCGCTCCGTGCTTCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS TCA 72 bp GCTTGTCCGCGGAGTGATGGCAGGTCTGGAACTGCGTaGGCCAGTGGCGCGCCTCCCCAGGGCTGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: ACPRSDGRSGTA*ASGAPPQGWPR
Trigger: GCGGGGCCAGCCCTGGGGAGGCGCGCCACTGGCTCACGCAGTTCCAGACCTGCCATCACTCCGCGGACAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 72 bp AGCCAGTGGCGCGCCTCCCCAGGGCTGGCCCCGCACTaGTTCAGGAAGGCCTGGATGTCCCGCTGCACCAGC +
Preference number: 6 (lower is better)
Translates to: SQWRASPGLAPH*FRKAWMSRCTS
Trigger: GCTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGCGGGGCCAGCCCTGGGGAGGCGCGCCACTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 72 bp AGCGGCGCGCGGCCGTCTCCCCGATGGGGCACAGGATaGGGATGCTGCCCGACTCCAGGCACCACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SGARPSPRWGTG*GCCPTPGTTAA
Trigger: TGCTGCAGTGGTGCCTGGAGTCGGGCAGCATCCCCATCCTGTGCCCCATCGGGGAGACGGCCGCGCGCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 72 bp CGCAGCGGGAGAGCGGCAGGCCCTCGGAGACGTAGATaGAGTGCAGCCGCGGGCGCAGCGAGGCCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: RSGRAAGPRRRR*SAAAGAARPGS
Trigger: ACTACCTGGCCTCGCTGCGCCCGCGGCTGCACTCCATCTACGTCTCCGAGGGCCTGCCGCTCTCCCGCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS CAA 72 bp CCCAGGACGGGCTCCATGGTCAGAATGGCGGCGGCGTaGTACCTGGCGCAGCGGGAGAGCGGCAGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: PRTGSMVRMAAA*YLAQRESGRPS
Trigger: CGAGGGCCTGCCGCTCTCCCGCTGCGCCAGGTACAACGCCGCCGCCATTCTGACCATGGAGCCCGTCCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS CCA 72 bp AGCGTGCTAGCGGCGGTGATGACGGCCGAGGAGTGGTaGGGCAGGCGGCTGAGCACGTCCACGATGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SVLAAVMTAEEW*GRRLSTSTMSR
Trigger: GCGGCTCATCGTGGACGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTCATCACCGCCGCTAGCACGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 72 bp CGGGCTCCATGGTCAGAATGGCGGCGGCGTTGTACCTaGCGCAGCGGGAGAGCGGCAGGCCCTCGGAGACGT +
Preference number: 6 (lower is better)
Translates to: RAPWSEWRRRCT*RSGRAAGPRRR
Trigger: ACGTCTCCGAGGGCCTGCCGCTCTCCCGCTGCGCCAGGTACAACGCCGCCGCCATTCTGACCATGGAGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589767.1
CDS CCA 72 bp AGCAGCGTGCTAGCGGCGGTGATGACGGCCGAGGAGTaGTGGGGCAGGCGGCTGAGCACGTCCACGATGAGC +
Preference number: 6 (lower is better)
Translates to: SSVLAAVMTAEE*WGRRLSTSTMS
Trigger: GCTCATCGTGGACGTGCTCAGCCGCCTGCCCCACCACTCCTCGGCCGTCATCACCGCCGCTAGCACGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 72 bp GAATGGCGGCGGCGTTGTACCCCTCGGAGACGTAGATaGAGTGCAGCCGCGGGCGCAGCGAGGCCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: EWRRRCTPRRRR*SAAAGAARPGS
Trigger: ACTACCTGGCCTCGCTGCGCCCGCGGCTGCACTCCATCTACGTCTCCGAGGGGTACAACGCCGCCGCCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000592915.1
CDS CAA 72 bp GCGGCGGCGTTGTGTCGAAGCGCGTCTACCAGCACCTaGCAGCTCTTGGCCAGCTGCGCCTTGGCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: AAALCRSASTST*QLLASCALASQ
Trigger: CTGGGAGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGCGCTTCGACACAACGCCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CAA 72 bp GGGACCCAGTCCCCGGCCCGCCCACCGCCCTCACCCTaGTTGCTAAAGAGCTCAGTGAGCAGCGTGCTAGCG +
Preference number: 6 (lower is better)
Translates to: GTQSPARPPPSP*LLKSSVSSVLA
Trigger: CGCTAGCACGCTGCTCACTGAGCTCTTTAGCAACAAGGGTGAGGGCGGTGGGCGGGCCGGGGACTGGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592915.1
CDS GCA 72 bp CCGGCAGCCCCAGGACCACCAGCGGCTTCATGTCCATaGGCTGCAAGAAGGCCAGGGCAAAGGCCAGACTGG +
Preference number: 6 (lower is better)
Translates to: PAAPGPPAASCP*AARRPGQRPDW
Trigger: CCAGTCTGGCCTTTGCCCTGGCCTTCTTGCAGCGCATGGACATGAAGCCGCTGGTGGTCCTGGGGCTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS GCA 72 bp CACAGGATGGGGATGCTGCCCGACTCCAGGCACCACTaGAGCAGGTCTGTCTCCACCGAGACGATGCCGCCG +
Preference number: 6 (lower is better)
Translates to: HRMGMLPDSRHH*SRSVSTETMPP
Trigger: CGGCGGCATCGTCTCGGTGGAGACAGACCTGCTGCAGTGGTGCCTGGAGTCGGGCAGCATCCCCATCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 72 bp CGCCGCAGGCACTCCCACAGCATCTGGCCGGAGCCTTaGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCC +
Preference number: 6 (lower is better)
Translates to: RRRHSHSIWPEP*PWRLELTTNLS
Trigger: GGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTGCCTGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 72 bp GCGTTGACCAGGTCCACTAGACGGCCCTGGTCCAGCTaGTCCAGGCTGCGCACCCGTAGCATTCGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: ALTRSTRRPWSS*SRLRTRSIRSA
Trigger: CGCCGAGCGAATGCTACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGACCTGGTCAACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 72 bp CCGCCGCAGGCACTCCCACAGCATCTGGCCGGAGCCTaGGCCCTGGCGGCTGGAGCTCACCACAAATTTGTC +
Preference number: 6 (lower is better)
Translates to: PPQALPQHLAGA*ALAAGAHHKFV
Trigger: GACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTGCCTGCGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 90 bp GCGGCGGCGTTGTGTCGAAGCGCGTCTACCAGCACCTTGCAGCTCTaGGCCAGCTGCGCCTTGGCCTCCCAGAAGGAAAGACAGCCCGAG +
Preference number: 6 (lower is better)
Translates to: AAALCRSASTSTLQL*ASCALASQKERQPE
Trigger: CTCGGGCTGTCTTTCCTTCTGGGAGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGCGCTTCGACACAACGCCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CAA 90 bp CTGAAGGTCCCGCCGCAGGCACTCCCACAGCATCTGGCCGGAGCCTaGGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCCAGGTACGG +
Preference number: 6 (lower is better)
Translates to: LKVPPQALPQHLAGA*ALAAGAHHKFVQVR
Trigger: CCGTACCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTGCCTGCGGCGGGACCTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS TCA 72 bp TCCACCTCGATGACGGCGAAGGGCTTGTCCGCGGAGTaGTGGCAGGTCTGGAACTGCGTGAGCCAGTGGCGC +
Preference number: 6 (lower is better)
Translates to: STSMTAKGLSAE*WQVWNCVSQWR
Trigger: GCGCCACTGGCTCACGCAGTTCCAGACCTGCCATCACTCCGCGGACAAGCCCTTCGCCGTCATCGAGGTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 72 bp CCCACAGCATCTGGCCGGAGCCTTGGCCCTGGCGGCTaGAGCTCACCACAAATTTGTCCAGGTACGGGGTGC +
Preference number: 6 (lower is better)
Translates to: PTASGRSLGPGG*SSPQICPGTGC
Trigger: GCACCCCGTACCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 90 bp GGCACAGCAGCGGCGGCGTTGTGTCGAAGCGCGTCTACCAGCACCTaGCAGCTCTTGGCCAGCTGCGCCTTGGCCTCCCAGAAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: GTAAAALCRSASTST*QLLASCALASQKER
Trigger: TCTTTCCTTCTGGGAGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGCGCTTCGACACAACGCCGCCGCTGCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS TCA 72 bp ATGGGGTTGGTGACCCGGGAGCGCCAGAAAAGTGTCTaGAGGTCCCGCCGCAGGCACTCCCACAGCATCTGG +
Preference number: 6 (lower is better)
Translates to: MGLVTRERQKSV*RSRRRHSHSIW
Trigger: CCAGATGCTGTGGGAGTGCCTGCGGCGGGACCTTCAGACACTTTTCTGGCGCTCCCGGGTCACCAACCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 72 bp GGCAGGCGGCTGAGCACGTCCACGATGAGCCGCATCTaGTGCCGTTCTTTTGTGCTCACCCACTCGGCGTTG +
Preference number: 6 (lower is better)
Translates to: GRRLSTSTMSRI*CRSFVLTHSAL
Trigger: CAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGATGCGGCTCATCGTGGACGTGCTCAGCCGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 72 bp GGCTGGAGCTCACCACAAATTTGTCCAGGTACGGGGTaGCCCCCAGGACGGGCTCCATGGTCAGAATGGCGG +
Preference number: 6 (lower is better)
Translates to: GWSSPQICPGTG*PPGRAPWSEWR
Trigger: CCGCCATTCTGACCATGGAGCCCGTCCTGGGGGGCACCCCGTACCTGGACAAATTTGTGGTGAGCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 72 bp CCGAAGCTGGCGTTGACCAGGTCCACTAGACGGCCCTaGTCCAGCTTGTCCAGGCTGCGCACCCGTAGCATT +
Preference number: 6 (lower is better)
Translates to: PKLALTRSTRRP*SSLSRLRTRSI
Trigger: AATGCTACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGACCTGGTCAACGCCAGCTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 72 bp TCGCGCAGGCCGCCTGTGTTATTGAGGAAGATGATTTaGGTGGGCCGCAGCGCCTTGGCCAGCGACGCGGTC +
Preference number: 6 (lower is better)
Translates to: SRRPPVLLRKMI*VGRSALASDAV
Trigger: GACCGCGTCGCTGGCCAAGGCGCTGCGGCCCACCAAAATCATCTTCCTCAATAACACAGGCGGCCTGCGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 90 bp CCGAAGCTGGCGTTGACCAGGTCCACTAGACGGCCCTGGTCCAGCTaGTCCAGGCTGCGCACCCGTAGCATTCGCTCGGCGTTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: PKLALTRSTRRPWSS*SRLRTRSIRSAFLN
Trigger: GTTCAAGAACGCCGAGCGAATGCTACGGGTGCGCAGCCTGGACAAGCTGGACCAGGGCCGTCTAGTGGACCTGGTCAACGCCAGCTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 90 bp CCGCCTGTGTTATTGAGGAAGATGATTTTGGTGGGCCGCAGCGCCTaGGCCAGCGACGCGGTCACCTCCAGGGAGTCGAGAAGCACGGAG +
Preference number: 6 (lower is better)
Translates to: PPVLLRKMILVGRSA*ASDAVTSRESRSTE
Trigger: CTCCGTGCTTCTCGACTCCCTGGAGGTGACCGCGTCGCTGGCCAAGGCGCTGCGGCCCACCAAAATCATCTTCCTCAATAACACAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 72 bp AGCCCCAGGACCACCAGCGGCTTCATGTCCATGCGCTaGAAGAAGGCCAGGGCAAAGGCCAGACTGGATACG +
Preference number: 6 (lower is better)
Translates to: SPRTTSGFMSMR*KKARAKARLDT
Trigger: CGTATCCAGTCTGGCCTTTGCCCTGGCCTTCTTGCAGCGCATGGACATGAAGCCGCTGGTGGTCCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS GCA 72 bp TCTGCTGCCGTTCTTTTGTGCTCACCCACTCGGCGTTaGACACCAGGTCCAGGTCGGCGGGCAGGTTCACGT +
Preference number: 6 (lower is better)
Translates to: SAAVLLCSPTRR*TPGPGRRAGSR
Trigger: ACGTGAACCTGCCCGCCGACCTGGACCTGGTGTGCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 72 bp AGGCGGCTGAGCACGTCCACGATGAGCCGCATCTGCTaGCGTTCTTTTGTGCTCACCCACTCGGCGTTGCAC +
Preference number: 6 (lower is better)
Translates to: RRLSTSTMSRIC*RSFVLTHSALH
Trigger: GTGCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGATGCGGCTCATCGTGGACGTGCTCAGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 72 bp AAGGCCAGGGCAAAGGCCAGACTGGATACGCCCTGCTaGCACTTGAGCACCTCCTCGTCCACCTCGATGACG +
Preference number: 6 (lower is better)
Translates to: KARAKARLDTPC*HLSTSSSTSMT
Trigger: CGTCATCGAGGTGGACGAGGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAGTCTGGCCTTTGCCCTGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CCA 72 bp AGGCACTCCCACAGCATCTGGCCGGAGCCTTGGCCCTaGCGGCTGGAGCTCACCACAAATTTGTCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: RHSHSIWPEPWP*RLELTTNLSRY
Trigger: GTACCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGCTCCGGCCAGATGCTGTGGGAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 90 bp ATGAGCCGCATCTGCTGCCGTTCTTTTGTGCTCACCCACTCGGCGTaGCACACCAGGTCCAGGTCGGCGGGCAGGTTCACGTTACTCAGG +
Preference number: 6 (lower is better)
Translates to: MSRICCRSFVLTHSA*HTRSRSAGRFTLLR
Trigger: CCTGAGTAACGTGAACCTGCCCGCCGACCTGGACCTGGTGTGCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGATGCGGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 72 bp AAGAAGGCCAGGGCAAAGGCCAGACTGGATACGCCCTaGTGGCACTTGAGCACCTCCTCGTCCACCTCGATG +
Preference number: 6 (lower is better)
Translates to: KKARAKARLDTP*WHLSTSSSTSM
Trigger: CATCGAGGTGGACGAGGAGGTGCTCAAGTGCCAGCAGGGCGTATCCAGTCTGGCCTTTGCCCTGGCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CAA 72 bp TCCAGGCTGCGCACCCGTAGCATTCGCTCGGCGTTCTaGAACAGGGTCCCGGACCCCTTGTTGCTAAAGAGC +
Preference number: 6 (lower is better)
Translates to: SRLRTRSIRSAF*NRVPDPLLLKS
Trigger: GCTCTTTAGCAACAAGGGGTCCGGGACCCTGTTCAAGAACGCCGAGCGAATGCTACGGGTGCGCAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CAA 72 bp TTGTGTCGAAGCGCGTCTACCAGCACCTTGCAGCTCTaGGCCAGCTGCGCCTTGGCCTCCCAGAAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: LCRSASTSTLQL*ASCALASQKER
Trigger: TCTTTCCTTCTGGGAGGCCAAGGCGCAGCTGGCCAAGAGCTGCAAGGTGCTGGTAGACGCGCTTCGACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293404.8
ENST00000589767.1
CDS CAA 72 bp TTATTGAGGAAGATGATTTTGGTGGGCCGCAGCGCCTaGGCCAGCGACGCGGTCACCTCCAGGGAGTCGAGA +
Preference number: 6 (lower is better)
Translates to: LLRKMILVGRSA*ASDAVTSRESR
Trigger: TCTCGACTCCCTGGAGGTGACCGCGTCGCTGGCCAAGGCGCTGCGGCCCACCAAAATCATCTTCCTCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS TCA 72 bp GCTTGTGAAAGGAGTCTGGCAGTCCCTTGGCGTGGTTaGCCAACTCATAGGAGTCCCGGATATCAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: ACERSLAVPWRG*PTHRSPGYQPG
Trigger: GCCTGGCTGATATCCGGGACTCCTATGAGTTGGTCAACCACGCCAAGGGACTGCCAGACTCCTTTCACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS GCA 72 bp ATTCCAGGGCCTGTAGTGTCCATGGTGAGGGTCAGCTaGCTGGGTCAGAAGCTGGCTTGTGAAAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: IPGPVVSMVRVS*LGQKLACERSL
Trigger: CAGACTCCTTTCACAAGCCAGCTTCTGACCCAGGCAGCTGACCCTCACCATGGACACTACAGGCCCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CCA 72 bp GCTGCCTGGGTCAGAAGCTGGCTTGTGAAAGGAGTCTaGCAGTCCCTTGGCGTGGTTGACCAACTCATAGGA +
Preference number: 6 (lower is better)
Translates to: AAWVRSWLVKGV*QSLGVVDQLIG
Trigger: TCCTATGAGTTGGTCAACCACGCCAAGGGACTGCCAGACTCCTTTCACAAGCCAGCTTCTGACCCAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293404.8
ENST00000589767.1
ENST00000592915.1
CDS CAA 72 bp CAGGTAGGACAGGCGCTGGTGGGACAATTTCCGTCTTaGGGAGACCTCCACAGTGAAATGATTTCAGTGGTC +
Preference number: 6 (lower is better)
Translates to: QVGQALVGQFPS*GDLHSEMISVV
Trigger: GACCACTGAAATCATTTCACTGTGGAGGTCTCCCAAAGACGGAAATTGTCCCACCAGCGCCTGTCCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592915.1
CDS CAA 90 bp TGGGGACTGCAGGTAGGACAGGCGCTGGTGGGACAATTTCCGTCTTaGGGAGACCTCCACAGTGAAATGATTTCAGTGGTCTGCATAGAT +
Preference number: 6 (lower is better)
Translates to: WGLQVGQALVGQFPS*GDLHSEMISVVCID
Trigger: ATCTATGCAGACCACTGAAATCATTTCACTGTGGAGGTCTCCCAAAGACGGAAATTGTCCCACCAGCGCCTGTCCTACCTGCAGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592915.1
CDS TCA 72 bp GGTGGGACAATTTCCGTCTTTGGGAGACCTCCACAGTaGAATGATTTCAGTGGTCTGCATAGATTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: GGTISVFGRPPQ*NDFSGLHRFVC
Trigger: ACAGACAAATCTATGCAGACCACTGAAATCATTTCACTGTGGAGGTCTCCCAAAGACGGAAATTGTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592915.1