Pregenerated sensors for NAF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000145414Ensembl transcript IDs: ENST00000274054.3, ENST00000422287.6, ENST00000502973.1, ENST00000509232.5, ENST00000509434.5, ENST00000509884.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCGCGGCCAACAGCACTTaGGTCCAGACCTTCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: CYQVASHATQKSLVKGRAAANST*VQTFQQ Trigger: CTGTTGGAAGGTCTGGACTCAAGTGCTGTTGGCCGC...GGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CCA 90 bp | GAGAAACTGCCACTTTTAGCAACAACTACCCTGATTAGTCAGCGGCCAACAGCATTCAGCCGGTGGCTGTaGCTGCGGCGCCGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: EKLPLLATTTLISQRPTAFSRWL*LRRRGP Trigger: GGGACCCCGGCGCCGCAGCCACAGCCACCGGCTGAA...TGCTGTTGGCCGCTGACTAATCAGGGTAGTTGTTGCTAAAAGTGGCAGTTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR GCA 90 bp | GAGAAACTGCCACTTTTAGCAACAACTACCCTGATTAGTCAGCGGCCAACAGCAGCGTTCAGAACGGGCTaGAGAGGCTGCTCCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EKLPLLATTTLISQRPTAAFRTG*RGCSPA Trigger: TGCCGGGGAGCAGCCTCTGCAGCCCGTTCTGAACGC...TGCTGTTGGCCGCTGACTAATCAGGGTAGTTGTTGCTAAAAGTGGCAGTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CCA 90 bp | TGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCCGGCGGCTGTGTCCCTaGCACAGGGGCAGAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CYQVASHATQKSLVKGRARRLCP*HRGRAR Trigger: CCGGGCTCTGCCCCTGTGCCAGGGACACAGCCGCCG...GGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CCA 90 bp | ATGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCGGCGATTCAGCCGGTaGCTGTGGCTGCGGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: MLSSSITCYTEIFGERKSRRFSR*LWLRRR Trigger: CCGGCGCCGCAGCCACAGCCACCGGCTGAATCGCCG...GCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR GCA 90 bp | TATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAATCGCCCGCGCAGGCTCTaGGGCTCCTGGGGAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: YQVASHATQKSLVKGRANRPRRL*GSWGGD Trigger: GTCACCTCCCCAGGAGCCGCAGAGCCTGCGCGGGCG...ATTGGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR GCA 90 bp | ATGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCTTAACCTCCACGGTCTaGCCAGCGTCCGGGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: MLSSSITCYTEIFGERKSLTSTV*PASGDP Trigger: GGGGTCCCCGGACGCTGGGCAGACCGTGGAGGTTAA...GCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR TCA 90 bp | CTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAATTCAGAGTTTCCAGCTaGGCGGCGGCGGCCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: LSSSITCYTEIFGERKSQFRVSS*AAAAST Trigger: AGTGGAGGCCGCCGCCGCTCAGCTGGAAACTCTGAA...TTGGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CCA 90 bp | TATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAATAGGCTCTGCGGCTCCTaGGGAGGTGACGCAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YQVASHATQKSLVKGRANRLCGS*GGDAVS Trigger: GGAGACTGCGTCACCTCCCCAGGAGCCGCAGAGCCT...ATTGGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CCA 90 bp | ATGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCGCAGCAACACTGCCTaGGCCCAACTTCCCGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: MLSSSITCYTEIFGERKSRSNTA*AQLPAF Trigger: AAACGCGGGAAGTTGGGCCCAGGCAGTGTTGCTGCG...GCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CCA 90 bp | TGTAGCACACTTCACTGCTATCTATTAGGAGAAACTGCCACTTTTAGCAACAACCAGGATTGGGGCCCCTaGACAAGCTCACGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTLHCYLLGETATFSNNQDWGP*TSSRLS Trigger: AGAGAGCCGTGAGCTTGTCCAGGGGCCCCAATCCTG...GTTGTTGCTAAAAGTGGCAGTTTCTCCTAATAGATAGCAGTGAAGTGTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR TCA 90 bp | TGTAGCACACTTCACTGCTATCTATTAGGAGAAACTGCCACTTTTAGCAACAACGCGGCCAACAGCACTTaGGTCCAGACCTTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CSTLHCYLLGETATFSNNAANST*VQTFQQ Trigger: CTGTTGGAAGGTCTGGACTCAAGTGCTGTTGGCCGC...GTTGTTGCTAAAAGTGGCAGTTTCTCCTAATAGATAGCAGTGAAGTGTGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR TCA 90 bp | ATACAGTACTTGAAATCTGTGGGTTGCCATGAGGTTCCCATGGCAACTCTTCTAATCTGTGGGTTGCCATaGGGTTCCCATGGCAACTCT | + |
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Preference number: 4 (lower is better) Translates to: IQYLKSVGCHEVPMATLLICGLP*GSHGNS Trigger: AGAGTTGCCATGGGAACCTCATGGCAACCCACAGAT...TAGAAGAGTTGCCATGGGAACCTCATGGCAACCCACAGATTTCAAGTACTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR TCA 90 bp | TGCTTGACTAGGCTGGTAGACTTGCTGTTACCATCACCAGCCATACCATCATTTAGCCATACCATCATTTaGGGATACAGTACTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: CLTRLVDLLLPSPAIPSFSHTII*GYSTLP Trigger: GGGGAGAGTACTGTATCCTCAAATGATGGTATGGCT...AAATGATGGTATGGCTGGTGATGGTAACAGCAAGTCTACCAGCCTAGTCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR GCA 90 bp | TGCTTGACTAGGCTGGTAGACTTGCTGTTACCATCACCAGCCATACCATCATTTTTGAAATCTGTGGGTTaGCATGAGGTTCCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLTRLVDLLLPSPAIPSFLKSVG*HEVPMA Trigger: TGCCATGGGAACCTCATGGCAACCCACAGATTTCAA...AAATGATGGTATGGCTGGTGATGGTAACAGCAAGTCTACCAGCCTAGTCAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR TCA 90 bp | TACCATCATTTGAGGATACAGTACTCTCCCCTCATCTGTGCTGTCACTTTTCGTTCTGGTGGTGGTTCCTaGTCATTCTTCCATGATGCA | + |
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Preference number: 4 (lower is better) Translates to: YHHLRIQYSPLICAVTFRSGGGS*SFFHDA Trigger: TGCATCATGGAAGAATGATCAGGAACCACCACCAGA...ACGAAAAGTGACAGCACAGATGAGGGGAGAGTACTGTATCCTCAAATGATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR CCA 90 bp | TGCTTGACTAGGCTGGTAGACTTGCTGTTACCATCACCAGCCATACCATCATTTAACCATGGTCTCTGGTaGTGGTTCCTGATCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: CLTRLVDLLLPSPAIPSFNHGLW*WFLIIL Trigger: AAGAATGATCAGGAACCACCACCAGAGACCATGGTT...AAATGATGGTATGGCTGGTGATGGTAACAGCAAGTCTACCAGCCTAGTCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR TCA 90 bp | GAGGATACAGTACTCTCCCCTCATCTGTGCTGTCACTTTTCGTGGTTTCAGTTAAGAACATACAGTACTTaGAATCTGTGGGTTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EDTVLSPHLCCHFSWFQLRTYST*NLWVAM Trigger: CATGGCAACCCACAGATTTCAAGTACTGTATGTTCT...TAACTGAAACCACGAAAAGTGACAGCACAGATGAGGGGAGAGTACTGTATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR GCA 90 bp | GAGAAACTGCCACTTTTAGCAACAACTACCCTGATTAGTCAGCGGCCAACAGCATCAAGTAGCATCACATaGTACACAGAAATCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: EKLPLLATTTLISQRPTASSSIT*YTEIFG Trigger: ACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGA...TGCTGTTGGCCGCTGACTAATCAGGGTAGTTGTTGCTAAAAGTGGCAGTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR TCA 90 bp | ATGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAAAGTCGGTGCCATTaGATTTCAGAGTTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: MLSSSITCYTEIFGERKSQSRCH*ISEFPA Trigger: AGCTGGAAACTCTGAAATTCAATGGCACCGACTTTG...GCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR TCA 90 bp | TATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAATTCTGGTGGTGGTTCCTaGTCATTCTTCCATGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YQVASHATQKSLVKGRANSGGGS*SFFHDA Trigger: TGCATCATGGAAGAATGATCAGGAACCACCACCAGA...ATTGGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR GCA 90 bp | CTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAACTCGAATATCTTTCCTaGTGCTTGTCGATCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSSITCYTEIFGERKSQLEYLS*CLSITF Trigger: AAAAGTGATCGACAAGCAGCAGGAAAGATATTCGAG...TTGGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR GCA 90 bp | TATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAATGAATATCTTTCCTGCTaGTTGTCGATCACTTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: YQVASHATQKSLVKGRANEYLSC*LSITFK Trigger: TTTAAAAGTGATCGACAAGCAGCAGGAAAGATATTC...ATTGGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS CCA 90 bp | GGAGGTGACGCAGTCTCCGCAGGCCGGCGATTCAGCCGGTGGCTGTaGCTGCGGCGCCGGGGTCCCGGCCGCGACGGCGTTCAGAACGGG | + |
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Preference number: 5 (lower is better) Translates to: GGDAVSAGRRFSRWL*LRRRGPGRDGVQNG Trigger: CCCGTTCTGAACGCCGTCGCGGCCGGGACCCCGGCGCCGCAGCCACAGCCACCGGCTGAATCGCCGGCCTGCGGAGACTGCGTCACCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS CCA 90 bp | TCCTGGGGAGGTGACGCAGTCTCCGCAGGCCGGCGATTCAGCCGGTaGCTGTGGCTGCGGCGCCGGGGTCCCGGCCGCGACGGCGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SWGGDAVSAGRRFSR*LWLRRRGPGRDGVQ Trigger: CTGAACGCCGTCGCGGCCGGGACCCCGGCGCCGCAGCCACAGCCACCGGCTGAATCGCCGGCCTGCGGAGACTGCGTCACCTCCCCAGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS GCA 90 bp | GCCGGGGTCCCGGCCGCGACGGCGTTCAGAACGGGCTGCAGAGGCTaGTCCCCGGCAGGCTTAACCTCCACGGTCTGCCCAGCGTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AGVPAATAFRTGCRG*SPAGLTSTVCPASG Trigger: CCCGGACGCTGGGCAGACCGTGGAGGTTAAGCCTGCCGGGGAGCAGCCTCTGCAGCCCGTTCTGAACGCCGTCGCGGCCGGGACCCCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS GCA 90 bp | GGCTGCGGCGCCGGGGTCCCGGCCGCGACGGCGTTCAGAACGGGCTaGAGAGGCTGCTCCCCGGCAGGCTTAACCTCCACGGTCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GCGAGVPAATAFRTG*RGCSPAGLTSTVCP Trigger: TGGGCAGACCGTGGAGGTTAAGCCTGCCGGGGAGCAGCCTCTGCAGCCCGTTCTGAACGCCGTCGCGGCCGGGACCCCGGCGCCGCAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS GCA 90 bp | ATCCGAGTCCGAGGTCTCCAAGGAGTCCGGCGCCCGCGCAGGCTCTaGGGCTCCTGGGGAGGTGACGCAGTCTCCGCAGGCCGGCGATTC | + |
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Preference number: 5 (lower is better) Translates to: IRVRGLQGVRRPRRL*GSWGGDAVSAGRRF Trigger: GAATCGCCGGCCTGCGGAGACTGCGTCACCTCCCCAGGAGCCGCAGAGCCTGCGCGGGCGCCGGACTCCTTGGAGACCTCGGACTCGGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS TCA 90 bp | GAGACGGAGCCGCCGGACCTTCCCCAACTCCAAAGTCGGTGCCATTaGATTTCAGAGTTTCCAGCTGAGCGGCGGCGGCCTCCACTACCT | + |
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Preference number: 5 (lower is better) Translates to: ETEPPDLPQLQSRCH*ISEFPAERRRPPLP Trigger: AGGTAGTGGAGGCCGCCGCCGCTCAGCTGGAAACTCTGAAATTCAATGGCACCGACTTTGGAGTTGGGGAAGGTCCGGCGGCTCCGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS TCA 90 bp | TCCCCAACTCCAAAGTCGGTGCCATTGAATTTCAGAGTTTCCAGCTaGGCGGCGGCGGCCTCCACTACCTCCATCGCACCGCGCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SPTPKSVPLNFRVSS*AAAASTTSIAPRQK Trigger: TTTCTGGCGCGGTGCGATGGAGGTAGTGGAGGCCGCCGCCGCTCAGCTGGAAACTCTGAAATTCAATGGCACCGACTTTGGAGTTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS GCA 90 bp | CTCTCTCCAGAAATAGAAAAACAACTTAGGCAACCGCAGCAACACTaGCTGGGCCCAACTTCCCGCGTTTCTCAGGTAACTACACGCGGA | + |
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Preference number: 5 (lower is better) Translates to: LSPEIEKQLRQPQQH*LGPTSRVSQVTTRG Trigger: TCCGCGTGTAGTTACCTGAGAAACGCGGGAAGTTGGGCCCAGGCAGTGTTGCTGCGGTTGCCTAAGTTGTTTTTCTATTTCTGGAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000422287.6 |
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| CDS-3UTR CAA 90 bp | TGTAGCACACTTCACTGCTATCTATTAGGAGAAACTGCCACTTTTAGCAACAACGGGTCGGCCTCAGGATaGGGGCCCCTGGACAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CSTLHCYLLGETATFSNNGSASG*GPLDKL Trigger: GAGCTTGTCCAGGGGCCCCAATCCTGAGGCCGACCC...GTTGTTGCTAAAAGTGGCAGTTTCTCCTAATAGATAGCAGTGAAGTGTGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS GCA 90 bp | GAGATACCATATGTTCTGAGTTATAGAAATGCTGAGGTGGAGGCCTaGCATGGCAAGATCGAGGGTATCTGGCCCTGGAAAATCCTCGTG | + |
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Preference number: 5 (lower is better) Translates to: EIPYVLSYRNAEVEA*HGKIEGIWPWKILV Trigger: CACGAGGATTTTCCAGGGCCAGATACCCTCGATCTTGCCATGGCAGGCCTCCACCTCAGCATTTCTATAACTCAGAACATATGGTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000509884.1 |
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| CDS-3UTR CAA 90 bp | CAGCCATACCATCATTTGAGGATACAGTACTCTCCCCTCATCTGTGCTGTCACTACTAGGCTGGTAGACTaGCTGTTACCATCACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QPYHHLRIQYSPLICAVTTRLVD*LLPSPA Trigger: GGCTGGTGATGGTAACAGCAAGTCTACCAGCCTAGT...AGTGACAGCACAGATGAGGGGAGAGTACTGTATCCTCAAATGATGGTATGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS TCA 90 bp | TGCCATGGCAAGATCGAGGGTATCTGGCCCTGGAAAATCCTCGTGTaGATTCTCTGTTACGATATCCTTTTGCATGCTCTGAAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: CHGKIEGIWPWKILV*ILCYDILLHALKQS Trigger: GCTCTGCTTCAGAGCATGCAAAAGGATATCGTAACAGAGAATTCACACGAGGATTTTCCAGGGCCAGATACCCTCGATCTTGCCATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000509884.1 |
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| CDS-3UTR CAA 90 bp | GAGAAACTGCCACTTTTAGCAACAACTACCCTGATTAGTCAGCGGCCAACAGCACCAAAGTCGGTGCCATaGAATTTCAGAGTTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: EKLPLLATTTLISQRPTAPKSVP*NFRVSS Trigger: GCTGGAAACTCTGAAATTCAATGGCACCGACTTTGG...TGCTGTTGGCCGCTGACTAATCAGGGTAGTTGTTGCTAAAAGTGGCAGTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CAA 90 bp | GAGGATACAGTACTCTCCCCTCATCTGTGCTGTCACTTTTCGTGGTTTCAGTTACAGCCATACCATCATTaGAGGATACAGTACTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: EDTVLSPHLCCHFSWFQLQPYHH*RIQYSP Trigger: GGGAGAGTACTGTATCCTCAAATGATGGTATGGCTG...TAACTGAAACCACGAAAAGTGACAGCACAGATGAGGGGAGAGTACTGTATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS-3UTR CAA 90 bp | AGGCAGAACATACAGTACTTGAAATCTGTGGGTTGCCATGAGGTTCCCATGGCACAGAACATACAGTACTaGAAATCTGTGGGTTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RQNIQYLKSVGCHEVPMAQNIQY*KSVGCH Trigger: ATGGCAACCCACAGATTTCAAGTACTGTATGTTCTG...TGCCATGGGAACCTCATGGCAACCCACAGATTTCAAGTACTGTATGTTCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS TCA 90 bp | GGTTTCAGTTACCTTCAGTCAACCATGGTCTCTGGTGGTGGTTCCTaGTCATTCTTCCATGATGCATCTGATCCCTTATCCTGTTTTAGT | + |
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Preference number: 5 (lower is better) Translates to: GFSYLQSTMVSGGGS*SFFHDASDPLSCFS Trigger: ACTAAAACAGGATAAGGGATCAGATGCATCATGGAAGAATGATCAGGAACCACCACCAGAGACCATGGTTGACTGAAGGTAACTGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS TCA 90 bp | GACTCACTTGACTGCAATGGTCTGGATCCGAGGCCACAATATCTGTaGGATATACCTGTACCAGGCTCATTAAATTCAGATTTGAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: DSLDCNGLDPRPQYL*DIPVPGSLNSDLSF Trigger: AAAACTCAAATCTGAATTTAATGAGCCTGGTACAGGTATATCTCACAGATATTGTGGCCTCGGATCCAGACCATTGCAGTCAAGTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CAA 90 bp | TGTAGCACACTTCACTGCTATCTATTAGGAGAAACTGCCACTTTTAGCAACAACTGGAAACCAAAAAGTTaGTGTGACTCACTTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: CSTLHCYLLGETATFSNNWKPKS*CDSLDC Trigger: GCAGTCAAGTGAGTCACACAAACTTTTTGGTTTCCA...GTTGTTGCTAAAAGTGGCAGTTTCTCCTAATAGATAGCAGTGAAGTGTGCTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS-3UTR CAA 90 bp | TGCTATCAAGTAGCATCACATGCTACACAGAAATCTTTGGTGAAAGGAAGAGCCAGGAAGACGATGAACTaGAACTATCTGAATCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: CYQVASHATQKSLVKGRARKTMN*NYLNLF Trigger: AAACAGATTCAGATAGTTCAAGTTCATCGTCTTCCT...GGCTCTTCCTTTCACCAAAGATTTCTGTGTAGCATGTGATGCTACTTGATAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS TCA 90 bp | AAATCCTCGTGTGAATTCTCTGTTACGATATCCTTTTGCATGCTCTaGAGCAGAGCTATGAGCATTCCAATTCTGATGTACTTCAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: KSSCEFSVTISFCML*SRAMSIPILMYFSK Trigger: TTTACTGAAGTACATCAGAATTGGAATGCTCATAGCTCTGCTTCAGAGCATGCAAAAGGATATCGTAACAGAGAATTCACACGAGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000509884.1 |
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| CDS GCA 90 bp | GAGTCTGACTTCCAGTTTAGACTTAAAATTCATCATAGTATCAGATaGAAAAGGGTGCCAAAGGTAAGAGTATCAAGGACTAAGCAAATT | + |
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Preference number: 5 (lower is better) Translates to: ESDFQFRLKIHHSIR*KRVPKVRVSRTKQI Trigger: AATTTGCTTAGTCCTTGATACTCTTACCTTTGGCACCCTTTTGCATCTGATACTATGATGAATTTTAAGTCTAAACTGGAAGTCAGACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509884.1 |
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| CDS CCA 72 bp | GGTGACGCAGTCTCCGCAGGCCGGCGATTCAGCCGGTaGCTGTGGCTGCGGCGCCGGGGTCCCGGCCGCGAC | + |
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Preference number: 6 (lower is better) Translates to: GDAVSAGRRFSR*LWLRRRGPGRD Trigger: GTCGCGGCCGGGACCCCGGCGCCGCAGCCACAGCCACCGGCTGAATCGCCGGCCTGCGGAGACTGCGTCACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS GCA 72 bp | GCCGGGGTCCCGGCCGCGACGGCGTTCAGAACGGGCTaGAGAGGCTGCTCCCCGGCAGGCTTAACCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: AGVPAATAFRTG*RGCSPAGLTST Trigger: CGTGGAGGTTAAGCCTGCCGGGGAGCAGCCTCTGCAGCCCGTTCTGAACGCCGTCGCGGCCGGGACCCCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS CAA 72 bp | CATCGCACCGCGCCAGAAACCGGGTCGGCCTCAGGATaGGGGCCCCTGGACAAGCTCACGGCTCTCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HRTAPETGSASG*GPLDKLTALSR Trigger: TCTGGAGAGAGCCGTGAGCTTGTCCAGGGGCCCCAATCCTGAGGCCGACCCGGTTTCTGGCGCGGTGCGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000509232.5 |
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| CDS TCA 72 bp | CCGCCGGACCTTCCCCAACTCCAAAGTCGGTGCCATTaGATTTCAGAGTTTCCAGCTGAGCGGCGGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PPDLPQLQSRCH*ISEFPAERRRP Trigger: AGGCCGCCGCCGCTCAGCTGGAAACTCTGAAATTCAATGGCACCGACTTTGGAGTTGGGGAAGGTCCGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS CAA 90 bp | CACTACCTCCATCGCACCGCGCCAGAAACCGGGTCGGCCTCAGGATaGGGGCCCCTGGACAAGCTCACGGCTCTCTCCAGAAATAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HYLHRTAPETGSASG*GPLDKLTALSRNRK Trigger: TTTTCTATTTCTGGAGAGAGCCGTGAGCTTGTCCAGGGGCCCCAATCCTGAGGCCGACCCGGTTTCTGGCGCGGTGCGATGGAGGTAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000509232.5 |
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| CDS TCA 72 bp | CCAAAGTCGGTGCCATTGAATTTCAGAGTTTCCAGCTaGGCGGCGGCGGCCTCCACTACCTCCATCGCACCG | + |
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Preference number: 6 (lower is better) Translates to: PKSVPLNFRVSS*AAAASTTSIAP Trigger: CGGTGCGATGGAGGTAGTGGAGGCCGCCGCCGCTCAGCTGGAAACTCTGAAATTCAATGGCACCGACTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000502973.1 ENST00000509232.5 |
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| CDS CCA 72 bp | CGCCAGAAACCGGGTCGGCCTCAGGATTGGGGCCCCTaGACAAGCTCACGGCTCTCTCCAGAAATAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: RQKPGRPQDWGP*TSSRLSPEIEK Trigger: TTTTTCTATTTCTGGAGAGAGCCGTGAGCTTGTCCAGGGGCCCCAATCCTGAGGCCGACCCGGTTTCTGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000274054.3 ENST00000422287.6 ENST00000509232.5 |
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| CDS GCA 72 bp | GAAATAGAAAAACAACTTAGGCAACCGCAGCAACACTaGCTGGGCCCAACTTCCCGCGTTTCTCAGGTAACT | + |
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Preference number: 6 (lower is better) Translates to: EIEKQLRQPQQH*LGPTSRVSQVT Trigger: AGTTACCTGAGAAACGCGGGAAGTTGGGCCCAGGCAGTGTTGCTGCGGTTGCCTAAGTTGTTTTTCTATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000422287.6 |
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| CDS GCA 72 bp | TATGTTCTGAGTTATAGAAATGCTGAGGTGGAGGCCTaGCATGGCAAGATCGAGGGTATCTGGCCCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: YVLSYRNAEVEA*HGKIEGIWPWK Trigger: TTTCCAGGGCCAGATACCCTCGATCTTGCCATGGCAGGCCTCCACCTCAGCATTTCTATAACTCAGAACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000509884.1 |
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| CDS TCA 72 bp | GGTGGGGGTAGGGAGTATGGTAAGTTAAGTAATGGATaGGCAGCCATGTTTGGTGTAGCCCAACCCATGTTT | + |
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Preference number: 6 (lower is better) Translates to: GGGREYGKLSNG*AAMFGVAQPMF Trigger: AAACATGGGTTGGGCTACACCAAACATGGCTGCTCATCCATTACTTAACTTACCATACTCCCTACCCCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274054.3 |
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| CDS CCA 72 bp | ACAGTACTCTCCCCTCATCTGTGCTGTCACTTTTCGTaGTTTCAGTTACCTTCAGTCAACCATGGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TVLSPHLCCHFS*FQLPSVNHGLW Trigger: CCAGAGACCATGGTTGACTGAAGGTAACTGAAACCACGAAAAGTGACAGCACAGATGAGGGGAGAGTACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS TCA 72 bp | TACCTTCAGTCAACCATGGTCTCTGGTGGTGGTTCCTaGTCATTCTTCCATGATGCATCTGATCCCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: YLQSTMVSGGGS*SFFHDASDPLS Trigger: GGATAAGGGATCAGATGCATCATGGAAGAATGATCAGGAACCACCACCAGAGACCATGGTTGACTGAAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS TCA 72 bp | AAGATCGAGGGTATCTGGCCCTGGAAAATCCTCGTGTaGATTCTCTGTTACGATATCCTTTTGCATGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KIEGIWPWKILV*ILCYDILLHAL Trigger: CAGAGCATGCAAAAGGATATCGTAACAGAGAATTCACACGAGGATTTTCCAGGGCCAGATACCCTCGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000509884.1 |
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| CDS GCA 72 bp | CCATCATTTGAGGATACAGTACTCTCCCCTCATCTGTaGTGTCACTTTTCGTGGTTTCAGTTACCTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PSFEDTVLSPHL*CHFSWFQLPSV Trigger: GACTGAAGGTAACTGAAACCACGAAAAGTGACAGCACAGATGAGGGGAGAGTACTGTATCCTCAAATGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509434.5 |
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| CDS TCA 72 bp | TCATCACTAAAATCTAAGGCCTCTGGTGGTGGTTCCTaGTCATTCTTCCATGATGCATCTGATCCCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SSLKSKASGGGS*SFFHDASDPLS Trigger: GGATAAGGGATCAGATGCATCATGGAAGAATGATCAGGAACCACCACCAGAGGCCTTAGATTTTAGTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000422287.6 |
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| CDS TCA 72 bp | GACTGCAATGGTCTGGATCCGAGGCCACAATATCTGTaGGATATACCTGTACCAGGCTCATTAAATTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: DCNGLDPRPQYL*DIPVPGSLNSD Trigger: ATCTGAATTTAATGAGCCTGGTACAGGTATATCTCACAGATATTGTGGCCTCGGATCCAGACCATTGCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422287.6 |
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| CDS TCA 72 bp | TGTGAATTCTCTGTTACGATATCCTTTTGCATGCTCTaGAGCAGAGCTATGAGCATTCCAATTCTGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: CEFSVTISFCML*SRAMSIPILMY Trigger: GTACATCAGAATTGGAATGCTCATAGCTCTGCTTCAGAGCATGCAAAAGGATATCGTAACAGAGAATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274054.3 ENST00000509884.1 |
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| CDS CAA 72 bp | ATTATGCATGTCAAACACTGGAAGAGGAAAGGGGTATaGTGGCATAATGGGATTATTTTGTCTCTGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: IMHVKHWKRKGV*WHNGIILSLRR Trigger: CCTTCTCAGAGACAAAATAATCCCATTATGCCACAATACCCCTTTCCTCTTCCAGTGTTTGACATGCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274054.3 |
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| CDS TCA 72 bp | TTTCTGGTTTCATTTTTCTTACCTGATGCTATTAGGTaGGCCTTCACTTTTCAGATATGGTTGGAAAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: FLVSFFLPDAIR*AFTFQIWLESR Trigger: CCTACTTTCCAACCATATCTGAAAAGTGAAGGCTCACCTAATAGCATCAGGTAAGAAAAATGAAACCAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502973.1 |
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