RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NACC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148411

Ensembl transcript IDs: ENST00000277554.4, ENST00000371753.5, ENST00000467669.1

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGAGCCCGGGCCGCCGCCCCCGCCCCACGGTACATTCAGGACGTaGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACGTCCA +
Preference number: 1 (lower is better)
Translates to: SEPGPPPPPHGTFRT*REHTAGPLSSHARP
Trigger: TGGACGTGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGCGGCGGCCCGGGCTCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp CAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTaGGACACATTAGTGCAAAATGCTCGGCCTGGCCCGCCCGGGGCG +
Preference number: 1 (lower is better)
Translates to: QQPRTSTDTPDSRPP*DTLVQNARPGPPGA
Trigger: CGCCCCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp GCGGCCCGCCGGGCTCACAGTATCTGTCACACCTCCGGTCCCTCCTaGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCCCTT +
Preference number: 1 (lower is better)
Translates to: AARRAHSICHTSGPS*TSPCNPAASWAHPL
Trigger: AAGGGGATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGGTGTGACAGATACTGTGAGCCCGGCGGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp TGCAGCCCTAGGAATGCAGGTCTTGGTCCCCCTGGACGTGGGCCCTaGGGAATGGGTGGAGGGGCCGAGGTTAGCGTCCACAGTGCCTGC +
Preference number: 1 (lower is better)
Translates to: CSPRNAGLGPPGRGP*GMGGGAEVSVHSAC
Trigger: GCAGGCACTGTGGACGCTAACCTCGGCCCCTCCACCCATTCCTCAGGGCCCACGTCCAGGGGGACCAAGACCTGCATTCCTAGGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp CCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGGGTCCTGCTaGCCTCTTGCCCACAGCTTTGTCCACATTCAGGGGCAAAGTACA +
Preference number: 1 (lower is better)
Translates to: PDPQSPTPAPPGGSC*PLAHSFVHIQGQST
Trigger: TGTACTTTGCCCCTGAATGTGGACAAAGCTGTGGGCAAGAGGTCAGCAGGACCCGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 90 bp ATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTaGCCCAGCCCAGGCCTGTCCCGGTCATCCCCTGCCTGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: MIPNPLSPTSAHTSN*PSPGLSRSSPACSL
Trigger: GAGGCTGCAGGCAGGGGATGACCGGGACAGGCCTGGGCTGGGGCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 90 bp CTCCAGAGGGAACTCAAGTGCAGCTCAACCTCACCTACCTGCCCCTaGTCCACCCCGCGGCTTCCTCCCATCTCCGAGGAAGGCTTGGTC +
Preference number: 1 (lower is better)
Translates to: LQRELKCSSTSPTCP*STPRLPPISEEGLV
Trigger: GACCAAGCCTTCCTCGGAGATGGGAGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGAGGTTGAGCTGCACTTGAGTTCCCTCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 90 bp AGGAAACTCCAGAGGGAACTCAAGTGCAGCTCAACCTCACCTACCTaGCCCTGCTCCACCCCGCGGCTTCCTCCCATCTCCGAGGAAGGC +
Preference number: 1 (lower is better)
Translates to: RKLQRELKCSSTSPT*PCSTPRLPPISEEG
Trigger: GCCTTCCTCGGAGATGGGAGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGAGGTTGAGCTGCACTTGAGTTCCCTCTGGAGTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp CACACACACGCACACACACACACTCGTGCACACACCCCACACAGGTaGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAA +
Preference number: 1 (lower is better)
Translates to: HTHAHTHTRAHTPHR*KARWAWPRVSERRK
Trigger: TTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTGTGGGGTGTGTGCACGAGTGTGTGTGTGTGCGTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp CGACTCACGCCCACCGTGGGACACATTAGTGCAAAATGCTCGGCCTaGCCCGCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTA +
Preference number: 1 (lower is better)
Translates to: RLTPTVGHISAKCSA*PARGAGRAQNPFTL
Trigger: TAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTGTCCCACGGTGGGCGTGAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 90 bp ACAGACGGCGATTACAAACGAGTGAGGAAGGGGCACGGGACATTGTaGGGGCCTGAACAGCAGTCAGGCGTCCTCTGTGCAGCCACCACC +
Preference number: 1 (lower is better)
Translates to: TDGDYKRVRKGHGTL*GPEQQSGVLCAATT
Trigger: GGTGGTGGCTGCACAGAGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGCCGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp GGGTGGTTCTTAGTTCAGCAGAAGGTCTGGATGCCTCTGCACCACTaGGCCACCTGCAGCCCTAGGAATGCAGGTCTTGGTCCCCCTGGA +
Preference number: 1 (lower is better)
Translates to: GWFLVQQKVWMPLHH*ATCSPRNAGLGPPG
Trigger: TCCAGGGGGACCAAGACCTGCATTCCTAGGGCTGCAGGTGGCTCAGTGGTGCAGAGGCATCCAGACCTTCTGCTGAACTAAGAACCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp GAGGTTAGCGTCCACAGTGCCTGCCCATGGTCCCCCACCTCCTTCTaGAAAGCAACGTATTTTTCTGGAGGGCAGGCATGTGCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: EVSVHSACPWSPTSF*KATYFSGGQACAGP
Trigger: AGGCCCAGCACATGCCTGCCCTCCAGAAAAATACGTTGCTTTCCAGAAGGAGGTGGGGGACCATGGGCAGGCACTGTGGACGCTAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp GCCCAAGACAGGGGAGGAAGAGGCAGAGAAAGGCTCCCTCTAGGCTaGGTGGTTCTTAGTTCAGCAGAAGGTCTGGATGCCTCTGCACCA +
Preference number: 1 (lower is better)
Translates to: AQDRGGRGRERLPLG*VVLSSAEGLDASAP
Trigger: TGGTGCAGAGGCATCCAGACCTTCTGCTGAACTAAGAACCACCCAGCCTAGAGGGAGCCTTTCTCTGCCTCTTCCTCCCCTGTCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp AAGGACACAGGCCTCCAAAACAAAAGGGAGGGACACCTGGGTAGGTaGCCACACCAGCACTTCACACAGGACTTCACACAGTCTGTGAGC +
Preference number: 1 (lower is better)
Translates to: KDTGLQNKREGHLGR*PHQHFTQDFTQSVS
Trigger: GCTCACAGACTGTGTGAAGTCCTGTGTGAAGTGCTGGTGTGGCCACCTACCCAGGTGTCCCTCCCTTTTGTTTTGGAGGCCTGTGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp TTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAACGAGTaGGGAAGGGGCACGGGACATTGTGCGGGCCTGAACAGCAGTCAG +
Preference number: 1 (lower is better)
Translates to: LPSLPRTKQTAITNE*GRGTGHCAGLNSSQ
Trigger: CTGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 90 bp GCCCTTCTGTCAGCAGCCAGGCCCCCAGGGATGGTCAAATTAAAGTaGAAATTTGGGTGTGGGGCAGATGAAGGAAACTCCAGAGGGAAC +
Preference number: 1 (lower is better)
Translates to: ALLSAARPPGMVKLK*KFGCGADEGNSRGN
Trigger: GTTCCCTCTGGAGTTTCCTTCATCTGCCCCACACCCAAATTTGCACTTTAATTTGACCATCCCTGGGGGCCTGGCTGCTGACAGAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 90 bp TTTAGAACCATCTTGTACCAAACCCTAAATGCTCCGGTGGTGACGTaGACGCGCGTGCACACACACAGACACACGCGTGCACACATACAC +
Preference number: 1 (lower is better)
Translates to: FRTILYQTLNAPVVT*TRVHTHRHTRAHIH
Trigger: GTGTATGTGTGCACGCGTGTGTCTGTGTGTGTGCACGCGCGTGCACGTCACCACCGGAGCATTTAGGGTTTGGTACAAGATGGTTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp CAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTaGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGG +
Preference number: 1 (lower is better)
Translates to: QHSETVVTAEDSYEL*ILRLGLAAGRGRQR
Trigger: CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp ACACACACACAGACACGCGCACACGCACACTCTCACCCACGGAGCTaGCTGGCTGACATGACAAAAGTATGCAGCAGCAACATTCTGAAA +
Preference number: 1 (lower is better)
Translates to: THTQTRAHAHSHPRS*LADMTKVCSSNILK
Trigger: TTTCAGAATGTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTGTGCGTGTGCGCGTGTCTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp AGACATCTCATAAATACTGAGTGGCTCGTCTCTCTCTACAGGGTCTaGATGAGTCAGGGTCACACTCACAGGACAGGACAACCCCGGATT +
Preference number: 1 (lower is better)
Translates to: RHLINTEWLVSLYRV*MSQGHTHRTGQPRI
Trigger: AATCCGGGGTTGTCCTGTCCTGTGAGTGTGACCCTGACTCATCCAGACCCTGTAGAGAGAGACGAGCCACTCAGTATTTATGAGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp CCCAGGGATGGTCAAATTAAAGTGCAAATTTGGGTGTGGGGCAGATaGAGGAAACTCCAGAGGGAACTCAAGTGCAGCTCAACCTCACCT +
Preference number: 1 (lower is better)
Translates to: PRDGQIKVQIWVWGR*RKLQRELKCSSTSP
Trigger: AGGTGAGGTTGAGCTGCACTTGAGTTCCCTCTGGAGTTTCCTTCATCTGCCCCACACCCAAATTTGCACTTTAATTTGACCATCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp CTCGCTGCTGGCAGAGGCAGACAGAGGGTTCTTGGAGTTTTCAGTTaGTTCATGGGCCATAGATCTTTTTCCACTTGCTGCCAAGATGTT +
Preference number: 1 (lower is better)
Translates to: LAAGRGRQRVLGVFS*FMGHRSFSTCCQDV
Trigger: AACATCTTGGCAGCAAGTGGAAAAAGATCTATGGCCCATGAACCAACTGAAAACTCCAAGAACCCTCTGTCTGCCTCTGCCAGCAGCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp CACATCCTTTTGTTTGTCATGGATTTCCACTGTCTGAAACGGCTCTaGGCACGCTTGAAGCCCTCGGTTTCCCTGTTCGCTTTTGAATGT +
Preference number: 1 (lower is better)
Translates to: HILLFVMDFHCLKRL*ARLKPSVSLFAFEC
Trigger: ACATTCAAAAGCGAACAGGGAAACCGAGGGCTTCAAGCGTGCTCAGAGCCGTTTCAGACAGTGGAAATCCATGACAAACAAAAGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp GACATAAAAATCACAATCGTGTACGATGCTAACAATGGAAGCGACTaGTCGGAATACGAGCCGGTCGTCCAGTCTGAATGCTTGCGATTC +
Preference number: 1 (lower is better)
Translates to: DIKITIVYDANNGSD*SEYEPVVQSECLRF
Trigger: GAATCGCAAGCATTCAGACTGGACGACCGGCTCGTATTCCGATCAGTCGCTTCCATTGTTAGCATCGTACACGATTGTGATTTTTATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 90 bp CATTCAGGGGCAAAGTACAACAACCAAATCCAATGCAAAGTTAAGTaGCGACAGAGAACTCGGGTGGACAGACACAATGCGGAAAACAAG +
Preference number: 1 (lower is better)
Translates to: HSGAKYNNQIQCKVK*RQRTRVDRHNAENK
Trigger: CTTGTTTTCCGCATTGTGTCTGTCCACCCGAGTTCTCTGTCGTCACTTAACTTTGCATTGGATTTGGTTGTTGTACTTTGCCCCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 90 bp ACAACCAAATCCAATGCAAAGTTAAGTGACGACAGAGAACTCGGGTaGACAGACACAATGCGGAAAACAAGACAGAATTCAAGTACCGAG +
Preference number: 1 (lower is better)
Translates to: TTKSNAKLSDDRELG*TDTMRKTRQNSSTE
Trigger: CTCGGTACTTGAATTCTGTCTTGTTTTCCGCATTGTGTCTGTCCACCCGAGTTCTCTGTCGTCACTTAACTTTGCATTGGATTTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTGACCGACTCTCGCCCTaGCCCAGCCCTGGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: APAPRYIQDVEGAHSRSADRLSP*PSPGRC
Trigger: GCAGCGGCCAGGGCTGGGCCAGGGCGAGAGTCGGTC...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCCCTGGACGTGGGCCCTaGGGAATGGGTGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSPGRGP*GMGGGA
Trigger: GGCCCCTCCACCCATTCCTCAGGGCCCACGTCCAGG...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTAGGTGGAAGGCCCGGTaGGCCTGGCCCCGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: APAPRYIQDVEGAHSRSARWKAR*AWPRVS
Trigger: GGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCT...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAGGTGGAAGGCCCGGTaGGCCTGGCCCCGAGTCTCC +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIRWKAR*AWPRVS
Trigger: GGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCGTCCCGGTCATCCCCTaGCTGCAGCCTCAGGCACCC +
Preference number: 2 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSVPVIP*LQPQAP
Trigger: GGGTGCCTGAGGCTGCAGGCAGGGGATGACCGGGAC...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCACACCCCACACAGGTaGAAGGCCCGGTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIHTPHR*KARWAW
Trigger: CCAGGCCCACCGGGCCTTCCACCTGTGTGGGGTGTG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCGGGTCAGCGGTGCCCTaGGGGTCAGGGGACCGAGGG +
Preference number: 2 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTGSAVP*GSGDRG
Trigger: CCCTCGGTCCCCTGACCCCCAGGGCACCGCTGACCC...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAGTGCACGTCCCACAGTaGGCCCGGGCGGGACAGTGG +
Preference number: 2 (lower is better)
Translates to: SGVPRSPGPALSSASHVLVHVPQ*ARAGQW
Trigger: CCACTGTCCCGCCCGGGCCCACTGTGGGACGTGCAC...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACCCTAACGGCCACAGATaGCCCACCCCAAGCCATGGT +
Preference number: 2 (lower is better)
Translates to: CPSGVPRSPGPALSSASHPNGHR*PTPSHG
Trigger: ACCATGGCTTGGGGTGGGTCATCTGTGGCCGTTAGG...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACAAGGGGACCGAGGGGCTaGAGAGCCGAGACGGATCGG +
Preference number: 2 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTRGPRG*RAETDR
Trigger: CCGATCCGTCTCGGCTCTGCAGCCCCTCGGTCCCCT...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCGCCCATACCTCCAACTaGCCCAGCCCAGGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIAHTSN*PSPGLS
Trigger: GGACAGGCCTGGGCTGGGGCAGTTGGAGGTATGGGC...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTGCTCACTGGCCTGTGTaGACACCGGAGGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAAHWPV*TPEGVL
Trigger: CAGCACCCCCTCCGGTGTGCACACAGGCCAGTGAGC...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACACTCCACCCCGAGGGGTaGGCCACAGCCATCACTGCC +
Preference number: 2 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTLHPEG*ATAITA
Trigger: GGCAGTGATGGCTGTGGCCCACCCCTCGGGGTGGAG...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCCCAGTGGGAGACGAGTaGTCCCTGGCCCTGGGCGGG +
Preference number: 2 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTPVGDE*SLALGG
Trigger: CCCGCCCAGGGCCAGGGACCACTCGTCTCCCACTGG...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTCGGCCACCGCTCACTaGCCTGTGTGCACACCGGAG +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASATAH*PVCTPE
Trigger: CTCCGGTGTGCACACAGGCCAGTGAGCGGTGGCCGA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 90 bp TGCCTCTGCACCACTGAGCCACCTGCAGCCCTAGGAATGCAGGTCTaGGTCCCCCTGGACGTGGGCCCTGAGGAATGGGTGGAGGGGCCG +
Preference number: 2 (lower is better)
Translates to: CLCTTEPPAALGMQV*VPLDVGPEEWVEGP
Trigger: CGGCCCCTCCACCCATTCCTCAGGGCCCACGTCCAGGGGGACCAAGACCTGCATTCCTAGGGCTGCAGGTGGCTCAGTGGTGCAGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGAGGCGGCCTCCGCTTaGTGGGTTGTGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLEAASA*WVVEVG
Trigger: CCCAACCTCCACAACCCATCAAGCGGAGGCCGCCTC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCACCACCGCCGGCCCCTaGTTCGTCTTCCGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTTTAGP*FVFRAG
Trigger: TCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGT...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACACGGTCATCCCCTGCCTaGAGCCTCAGGCACCCTCCA +
Preference number: 2 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTRSSPA*SLRHPP
Trigger: TGGAGGGTGCCTGAGGCTGCAGGCAGGGGATGACCG...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTCCATGCAACCCAGCTaGCTCCTGGGCCCATCCCCT +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASMQPS*LLGPSP
Trigger: AGGGGATGGGCCCAGGAGGCAGCTGGGTTGCATGGA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCGTGGGCCCTGAGGAATaGGTGGAGGGGCCGAGGTTA +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIVGPEE*VEGPRL
Trigger: TAACCTCGGCCCCTCCACCCATTCCTCAGGGCCCAC...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCGACATTGTGCGGGCCTaGACAGCAGTCAGGCGTCCT +
Preference number: 2 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSDIVRA*TAVRRP
Trigger: AGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTC...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCCCTCACCACACCCCTaGACACACACGCACACACAC +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIPSPHP*THTHTH
Trigger: GTGTGTGTGCGTGTGTGTGCAGGGGTGTGGTGAGGG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCCACATTAGTGCAAAATaGTCGGCCTGGCCCGCCCGG +
Preference number: 2 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSHISAK*SAWPAR
Trigger: CCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTG...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCCCTTTTTCCCCCAGTaGGAGACGAGTGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIPFFPQ*ETSGPW
Trigger: CCAGGGACCACTCGTCTCCCACTGGGGGAAAAAGGG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCATCACCTACCTGCCCCTaGTCCACCCCGCGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHASPTCP*STPRLP
Trigger: AGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGA...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAAAGGCCCGGTGGGCCTaGCCCCGAGTCTCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAKARWA*PRVSER
Trigger: TCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCGGGGAAGCCGAGTTCTaGAGGGACAGAGGTGAGCAA +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIGEAEF*RDRGEQ
Trigger: TTGCTCACCTCTGTCCCTCCAGAACTCGGCTTCCCC...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAGCCTCGCCACAGGGGTaGGCTTCGGGGCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAASPQG*ASGQKG
Trigger: TCCTTTCTGCCCCGAAGCCCACCCCTGTGGCGAGGC...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGAGGCGGCCTCCGCTTaGTGGGTTGTGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGEAASA*WVVEVG
Trigger: CCCAACCTCCACAACCCATCAAGCGGAGGCCGCCTC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGGCAGCCCAGGAGGCTaGGTGCTGTCTGTAGAGGCG +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGGSPGG*VLSVEA
Trigger: CGCCTCTACAGACAGCACTCAGCCTCCTGGGCTGCC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCGCGATTACAAACGAGTaGGGAAGGGGCACGGGACAT +
Preference number: 2 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSAITNE*GRGTGH
Trigger: ATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGC...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGACCACCGCCGGCCCCTaGTTCGTCTTCCGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: YELWILRLGLAAGRGRQRTTAGP*FVFRAG
Trigger: TCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGT...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCTCTGTCCCCTACCAGTaGCCATACCTCCAACTGCCC +
Preference number: 2 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLSVPYQ*PYLQLP
Trigger: GGGCAGTTGGAGGTATGGGCACTGGTAGGGGACAGA...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAGGTCTGGATGCCTCTaGACCACTGAGCCACCTGCA +
Preference number: 2 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLRSGCL*TTEPPA
Trigger: TGCAGGTGGCTCAGTGGTGCAGAGGCATCCAGACCT...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCCCAGTGGGAGACGAGTaGTCCCTGGCCCTGGGCGGG +
Preference number: 2 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCPVGDE*SLALGG
Trigger: CCCGCCCAGGGCCAGGGACCACTCGTCTCCCACTGG...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAAAGGAGGGCTGCCCCTaGACAAGGACACAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAKEGCP*TRTQAS
Trigger: GGAGGCCTGTGTCCTTGTCCAGGGGCAGCCCTCCTT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCCAGGGTGCAGCACATaGTCCTCCCCTAGCGGAGGC +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGPGCST*SSPSGG
Trigger: GCCTCCGCTAGGGGAGGACCATGTGCTGCACCCTGG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTCTACAGGGTCTGGATaGGTCAGGGTCACACTCACA +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASTGSG*VRVTLT
Trigger: TGTGAGTGTGACCCTGACTCATCCAGACCCTGTAGA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGGTCAGGCGTCCTCTGTaGAGCCACCACCTCCGGCAG +
Preference number: 2 (lower is better)
Translates to: YELWILRLGLAAGRGRQRVRRPL*SHHLRQ
Trigger: CTGCCGGAGGTGGTGGCTGCACAGAGGACGCCTGAC...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAACAAGGACAGGGTGTaGGGGCAGAGTAAAGTACCC +
Preference number: 2 (lower is better)
Translates to: PPVPPGPLHATQLPPGPINKDRV*GQSKVP
Trigger: GGGTACTTTACTCTGCCCCCACACCCTGTCCTTGTT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACGAGACGAGTGGTCCCTaGCCCTGGGCGGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNETSGP*PWAGEQ
Trigger: CTGCTCCCCCGCCCAGGGCCAGGGACCACTCGTCTC...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAAAAGGGAGGGACACCTaGGTAGGTGGCCACACCAGC +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAKGRDT*VGGHTS
Trigger: GCTGGTGTGGCCACCTACCCAGGTGTCCCTCCCTTT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCGGGGAAGCCGAGTTCTaGAGGGACAGAGGTGAGCAA +
Preference number: 2 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTGEAEF*RDRGEQ
Trigger: TTGCTCACCTCTGTCCCTCCAGAACTCGGCTTCCCC...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTTCTCCGAGGAAGGCTTaGTCCAGGTTCCCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGSPRKA*SRFPAG
Trigger: GCCCGCTGGGAACCTGGACCAAGCCTTCCTCGGAGA...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 90 bp GTGCACACCGGAGGGGGTGCTGATGGGCGCAGGGCTGCACTTGTTTaGCAAGTGAAGATGGGGAAGCCGAGTTCTGGAGGGACAGAGGTG +
Preference number: 2 (lower is better)
Translates to: VHTGGGADGRRAALV*QVKMGKPSSGGTEV
Trigger: CACCTCTGTCCCTCCAGAACTCGGCTTCCCCATCTTCACTTGCAAAACAAGTGCAGCCCTGCGCCCATCAGCACCCCCTCCGGTGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTGGAGGCTGACCTTGTaGATATCAAAAGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAWRLTL*ISKGSP
Trigger: AGGGCTCCCTTTTGATATTCACAAGGTCAGCCTCCA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCCCTCACCACACCCCTaGACACACACGCACACACAC +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGPSPHP*THTHTH
Trigger: GTGTGTGTGCGTGTGTGTGCAGGGGTGTGGTGAGGG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGGCACCCTCCATCCATaGACACCCCTCAAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGGTLHP*TPLKAD
Trigger: GTCTGCCTTGAGGGGTGTGCATGGATGGAGGGTGCC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCATCTGTCCCCTACCAGTaGCCATACCTCCAACTGCCC +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHASVPYQ*PYLQLP
Trigger: GGGCAGTTGGAGGTATGGGCACTGGTAGGGGACAGA...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCCAGAGGGAACTCAAGTaGAGCTCAACCTCACCTACC +
Preference number: 2 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLQRELK*SSTSPT
Trigger: GGTAGGTGAGGTTGAGCTGCACTTGAGTTCCCTCTG...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCATCAAAAGGGAGCCCTaGGAACTTCCTCGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTIKREP*ELPRRR
Trigger: CCTCCTGCGAGGAAGTTCCCAGGGCTCCCTTTTGAT...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCACACCCCACACAGGTaGAAGGCCCGGTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNHTPHR*KARWAW
Trigger: CCAGGCCCACCGGGCCTTCCACCTGTGTGGGGTGTG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCCCTTTTTCCCCCAGTaGGAGACGAGTGGTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGPFFPQ*ETSGPW
Trigger: CCAGGGACCACTCGTCTCCCACTGGGGGAAAAAGGG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGAAGGAGGGCTGCCCCTaGACAAGGACACAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: YELWILRLGLAAGRGRQRKEGCP*TRTQAS
Trigger: GGAGGCCTGTGTCCTTGTCCAGGGGCAGCCCTCCTT...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGAGCAACGTATTTTTCTaGAGGGCAGGCATGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASNVFF*RAGMCW
Trigger: CCAGCACATGCCTGCCCTCCAGAAAAATACGTTGCT...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGGACAGAGAACTCGGGTaGACAGACACAATGCGGAAA +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQADRELG*TDTMRK
Trigger: TTTCCGCATTGTGTCTGTCCACCCGAGTTCTCTGTC...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTATGGAGGCTGACCTTGTaGATATCAAAAGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: SGVPRSPGPALSSASHVLWRLTL*ISKGSP
Trigger: AGGGCTCCCTTTTGATATTCACAAGGTCAGCCTCCA...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCCCCAGGTCCGGCCCTaGGCTCAGCTTCACACGTAC +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNPQVRP*AQLHTY
Trigger: GTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCTTCCTCGCAGGAGGCTaGCAGTGGCCTAATTGTTTA +
Preference number: 2 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLFLAGG*QWPNCL
Trigger: TAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGAA...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCGGTCATCCCCTGCCTaGAGCCTCAGGCACCCTCCA +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNRSSPA*SLRHPP
Trigger: TGGAGGGTGCCTGAGGCTGCAGGCAGGGGATGACCG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGGCAGGAGGCTGCCAGTaGCCTAATTGTTTACAGTAT +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQAAGGCQ*PNCLQY
Trigger: ATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGC...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCCAGGGTGCAGCACATaGTCCTCCCCTAGCGGAGGC +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNPGCST*SSPSGG
Trigger: GCCTCCGCTAGGGGAGGACCATGTGCTGCACCCTGG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGCACCCACTTTGGAGTaGAGGGCAGAGAGAGCCCTT +
Preference number: 2 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGAPTLE*RAERAL
Trigger: AAGGGCTCTCTCTGCCCTCCACTCCAAAGTGGGTGC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCTGGGCCCATCCCCTTaGGGAAGAGGAAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNLGPSP*GRGRQG
Trigger: GCCCTGCCTTCCTCTTCCCCAAGGGGATGGGCCCAG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGACCTCCGGTCCCTCCTaGACCTCTCCATGCAACCCA +
Preference number: 2 (lower is better)
Translates to: YELWILRLGLAAGRGRQRTSGPS*TSPCNP
Trigger: TGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGGT...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 90 bp AAAACAGACGGCGATTACAAACGAGTGAGGAAGGGGCACGGGACATaGTGCGGGCCTGAACAGCAGTCAGGCGTCCTCTGTGCAGCCACC +
Preference number: 2 (lower is better)
Translates to: KTDGDYKRVRKGHGT*CGPEQQSGVLCAAT
Trigger: GGTGGCTGCACAGAGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGCCGTCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCGCTACACTTGGAGGCTaGCCTTGTGAATATCAAAAG +
Preference number: 2 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSATLGG*PCEYQK
Trigger: CTTTTGATATTCACAAGGTCAGCCTCCAAGTGTAGC...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGGGTCAGCGGTGCCCTaGGGGTCAGGGGACCGAGGG +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIGSAVP*GSGDRG
Trigger: CCCTCGGTCCCCTGACCCCCAGGGCACCGCTGACCC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACTCTTCTGGCCACACCTaGGAAGGAGGGCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNSSGHT*EGGLPL
Trigger: CAGGGGCAGCCCTCCTTCCCAGGTGTGGCCAGAAGA...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAAGGCTCCCTCTAGGCTaGGTGGTTCTTAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: GTFRTWREHTAGPLSSHARLPLG*VVLSSA
Trigger: TGCTGAACTAAGAACCACCCAGCCTAGAGGGAGCCT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGCTCATAAATACTGAGTaGCTCGTCTCTCTCTACAGG +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQALINTE*LVSLYR
Trigger: CCTGTAGAGAGAGACGAGCCACTCAGTATTTATGAG...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCTCCAACCCCACCTGTaGCCAAGACAGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNLQPHL*PRQGRK
Trigger: CTTCCTCCCCTGTCTTGGGCACAGGTGGGGTTGGAG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGACCCAGAGAGGTTCCATaGGGAAGGAAGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: WAWPRVSERRKNEELGPGPREVP*GRKEGS
Trigger: TGACCCTTCCTTCCTTCCCCATGGAACCTCTCTGGG...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGGGTACATTCAGGACGTaGAGGGAGCACACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: YELWILRLGLAAGRGRQRGTFRT*REHTAG
Trigger: ACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCGCTACACTTGGAGGCTaGCCTTGTGAATATCAAAAG +
Preference number: 2 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTATLGG*PCEYQK
Trigger: CTTTTGATATTCACAAGGTCAGCCTCCAAGTGTAGC...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACAGGTCTGGATGCCTCTaGACCACTGAGCCACCTGCA +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNRSGCL*TTEPPA
Trigger: TGCAGGTGGCTCAGTGGTGCAGAGGCATCCAGACCT...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCAGTTCAGTAGGTAAGTaGCTTGATCACATTTGTTTG +
Preference number: 2 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGSSVGK*LDHICL
Trigger: CAAACAAATGTGATCAAGCCACTTACCTACTGAACT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCCCCAGAGAGGTTCCATaGGGAAGGAAGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCPREVP*GRKEGS
Trigger: TGACCCTTCCTTCCTTCCCCATGGAACCTCTCTGGG...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACGCACCCACTTTGGAGTaGAGGGCAGAGAGAGCCCTT +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNAPTLE*RAERAL
Trigger: AAGGGCTCTCTCTGCCCTCCACTCCAAAGTGGGTGC...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCTTAGGACTCGCTGCTaGCAGAGGCAGACAGAGGGT +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNLRTRC*QRQTEG
Trigger: ACCCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTCACCTACCTGCCCCTaGTCCACCCCGCGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELSPTCP*STPRLP
Trigger: AGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGA...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGAGTTCAGTAGGTAAGTaGCTTGATCACATTTGTTTG +
Preference number: 2 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASSVGK*LDHICL
Trigger: CAAACAAATGTGATCAAGCCACTTACCTACTGAACT...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCATGCCTCTGCACCACTaGGCCACCTGCAGCCCTAGG +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIMPLHH*ATCSPR
Trigger: CCTAGGGCTGCAGGTGGCTCAGTGGTGCAGAGGCAT...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACGTGCACGTCCCACAGTaGGCCCGGGCGGGACAGTGG +
Preference number: 2 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYVHVPQ*ARAGQW
Trigger: CCACTGTCCCGCCCGGGCCCACTGTGGGACGTGCAC...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACGGGAGTGGGGTGCGCTaGTCGGCCACCGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYGSGVR*SATAHW
Trigger: CCAGTGAGCGGTGGCCGACCAGCGCACCCCACTCCC...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGACATTGTGCGGGCCTaGACAGCAGTCAGGCGTCCT +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELDIVRA*TAVRRP
Trigger: AGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACTTCCTCGCAGGAGGCTaGCAGTGGCCTAATTGTTTA +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNFLAGG*QWPNCL
Trigger: TAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGAA...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAACTGGAGCCTGAGCCCTaGCCCGTCGCCCCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQLEPEP*PVAPER
Trigger: CCTCTCTGGGGCGACGGGGCAGGGCTCAGGCTCCAG...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGTGCTACATCAGCTGTaGACGTCCCACAGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELVLHQL*TSHSGP
Trigger: GGGCCCACTGTGGGACGTGCACAGCTGATGTAGCAC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCACATTAGTGCAAAATaGTCGGCCTGGCCCGCCCGG +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIHISAK*SAWPAR
Trigger: CCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCGCTTAGGACTCGCTaGTGGCAGAGGCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIALRTR*WQRQTE
Trigger: CTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACCTCCACCCCGAGGGGTaGGCCACAGCCATCACTGCC +
Preference number: 2 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYLHPEG*ATAITA
Trigger: GGCAGTGATGGCTGTGGCCCACCCCTCGGGGTGGAG...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTATCGGCCACCGCTCACTaGCCTGTGTGCACACCGGAG +
Preference number: 2 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLSATAH*PVCTPE
Trigger: CTCCGGTGTGCACACAGGCCAGTGAGCGGTGGCCGA...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACTGGAGGTTGGGGGAGTaGGGTGCGCTGGTCGGCCAC +
Preference number: 2 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYWRLGE*GALVGH
Trigger: GTGGCCGACCAGCGCACCCCACTCCCCCAACCTCCA...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGATGCTAAGGCACTCTaGAAGGCCCCTCTGAGCCCG +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELDAKAL*KAPLSP
Trigger: CGGGCTCAGAGGGGCCTTCCAGAGTGCCTTAGCATC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCACCTCCGGTCCCTCCTaGACCTCTCCATGCAACCCA +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELTSGPS*TSPCNP
Trigger: TGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGGT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCACTTGTTTTGCAAGTaGAGATGGGGAAGCCGAGTT +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNHLFCK*RWGSRV
Trigger: AACTCGGCTTCCCCATCTTCACTTGCAAAACAAGTG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAATGCCTCTGCACCACTaGGCCACCTGCAGCCCTAGG +
Preference number: 2 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLMPLHH*ATCSPR
Trigger: CCTAGGGCTGCAGGTGGCTCAGTGGTGCAGAGGCAT...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGACCGACTCTCGCCCTaGCCCAGCCCTGGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMDRLSP*PSPGRC
Trigger: GCAGCGGCCAGGGCTGGGCCAGGGCGAGAGTCGGTC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGGACACCTGGGTAGGTaGCCACACCAGCACTTCACA +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIGHLGR*PHQHFT
Trigger: TGTGAAGTGCTGGTGTGGCCACCTACCCAGGTGTCC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCTTAGGACTCGCTGCTaGCAGAGGCAGACAGAGGGT +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAILRTRC*QRQTEG
Trigger: ACCCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTACTCCAACCCCACCTGTaGCCAAGACAGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLLQPHL*PRQGRK
Trigger: CTTCCTCCCCTGTCTTGGGCACAGGTGGGGTTGGAG...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCAGCATAATCCCAAAGTaGCTGAGGCGGCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAISIIPK*LRRQRA
Trigger: TGCCCTCTGCCGCCTCAGCCACTTTGGGATTATGCT...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGGCAGCCCAGGAGGCTaGGTGCTGTCTGTAGAGGCG +
Preference number: 2 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMGSPGG*VLSVEA
Trigger: CGCCTCTACAGACAGCACTCAGCCTCCTGGGCTGCC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCTTTCAAGTCTTGGGATaGGGGGTTCTTCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIFQVLG*GVLLAT
Trigger: TGTGGCCAGAAGAACCCCCCATCCCAAGACTTGAAA...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCATAAAAATTTCCCTTTaGGGGGAGCCCAGGCAGTAC +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIIKISL*GEPRQY
Trigger: GTACTGCCTGGGCTCCCCTCAAAGGGAAATTTTTAT...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGCAGGAGGCTGCCAGTaGCCTAATTGTTTACAGTAT +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELAGGCQ*PNCLQY
Trigger: ATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACTTTTCAGTTGGTTCATaGGCCATAGATCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNFSVGS*AIDLFP
Trigger: TGGAAAAAGATCTATGGCCCATGAACCAACTGAAAA...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTACTGGAGGGACAGAGGTaGGCAACAGACATTTCAAGT +
Preference number: 2 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLLEGQR*ATDISS
Trigger: ACTTGAAATGTCTGTTGCTCACCTCTGTCCCTCCAG...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAAGCATAATCCCAAAGTaGCTGAGGCGGCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQSIIPK*LRRQRA
Trigger: TGCCCTCTGCCGCCTCAGCCACTTTGGGATTATGCT...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACCTGGAGGGACAGAGGTaGGCAACAGACATTTCAAGT +
Preference number: 2 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYLEGQR*ATDISS
Trigger: ACTTGAAATGTCTGTTGCTCACCTCTGTCCCTCCAG...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCACATCTCATAAATACTaGGTGGCTCGTCTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: MQQQHSETVVTAEDSYELTSHKY*VARLSL
Trigger: TAGAGAGAGACGAGCCACTCAGTATTTATGAGATGT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAAACAAGGACAGGGTGTaGGGGCAGAGTAAAGTACCC +
Preference number: 2 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQNKDRV*GQSKVP
Trigger: GGGTACTTTACTCTGCCCCCACACCCTGTCCTTGTT...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCTTGGAGTTTTCAGTTaGTTCATGGGCCATAGATCT +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAILGVFS*FMGHRS
Trigger: AGATCTATGGCCCATGAACCAACTGAAAACTCCAAG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCTCTTTTTCCACTTGCTaGCAAGATGTTTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: FSKHSIRRMDALLAPSAISFSTC*QDVSIK
Trigger: TTTTATGGAAACATCTTGGCAGCAAGTGGAAAAAGA...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR TCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGATAAAAATTTCCCTTTaGGGGGAGCCCAGGCAGTAC +
Preference number: 2 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMIKISL*GEPRQY
Trigger: GTACTGCCTGGGCTCCCCTCAAAGGGAAATTTTTAT...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGCTCATAAATACTGAGTaGCTCGTCTCTCTCTACAGG +
Preference number: 2 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMLINTE*LVSLYR
Trigger: CCTGTAGAGAGAGACGAGCCACTCAGTATTTATGAG...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGCAGACAGAGGGTTCTTaGAGTTTTCAGTTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMQTEGS*SFQLVH
Trigger: ATGAACCAACTGAAAACTCCAAGAACCCTCTGTCTG...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR GCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGTTTATCTATAGCTCTTaGCTTCCTTACCCAGAACAA +
Preference number: 2 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMFIYSS*LPYPEQ
Trigger: TTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp GGGCCGCCGCCCCCGCCCCACGGTACATTCAGGACGTaGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GPPPPPHGTFRT*REHTAGPLSSH
Trigger: GTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGCGGCGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp GCACACACACACACTCGTGCACACACCCCACACAGGTaGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAA +
Preference number: 3 (lower is better)
Translates to: AHTHTRAHTPHR*KARWAWPRVSE
Trigger: TTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTGTGGGGTGTGTGCACGAGTGTGTGTGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp CCCACCGTGGGACACATTAGTGCAAAATGCTCGGCCTaGCCCGCCCGGGGCGCAGGGAGAGCTCAGAACCCA +
Preference number: 3 (lower is better)
Translates to: PTVGHISAKCSA*PARGAGRAQNP
Trigger: TGGGTTCTGAGCTCTCCCTGCGCCCCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTGTCCCACGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp AGGAATGCAGGTCTTGGTCCCCCTGGACGTGGGCCCTaGGGAATGGGTGGAGGGGCCGAGGTTAGCGTCCAC +
Preference number: 3 (lower is better)
Translates to: RNAGLGPPGRGP*GMGGGAEVSVH
Trigger: GTGGACGCTAACCTCGGCCCCTCCACCCATTCCTCAGGGCCCACGTCCAGGGGGACCAAGACCTGCATTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp CGGGCTCACAGTATCTGTCACACCTCCGGTCCCTCCTaGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RAHSICHTSGPS*TSPCNPAASWA
Trigger: GGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGGTGTGACAGATACTGTGAGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp ACGAGTGAGGAAGGGGCACGGGACATTGTGCGGGCCTaGACAGCAGTCAGGCGTCCTCTGTGCAGCCACCAC +
Preference number: 3 (lower is better)
Translates to: TSEEGARDIVRA*TAVRRPLCSHH
Trigger: GTGGTGGCTGCACAGAGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp CGCACGTCCACAGACACTCCCGACTCACGCCCACCGTaGGACACATTAGTGCAAAATGCTCGGCCTGGCCCG +
Preference number: 3 (lower is better)
Translates to: RTSTDTPDSRPP*DTLVQNARPGP
Trigger: CGGGCCAGGCCGAGCATTTTGCACTAATGTGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTATCTCCGAGGAAGGCTaGGTCCAGGTTCCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGISEEG*VQVPSG
Trigger: CCCGCTGGGAACCTGGACCAAGCCTTCCTCGGAGAT...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 72 bp GAACTCAAGTGCAGCTCAACCTCACCTACCTGCCCCTaGTCCACCCCGCGGCTTCCTCCCATCTCCGAGGAA +
Preference number: 3 (lower is better)
Translates to: ELKCSSTSPTCP*STPRLPPISEE
Trigger: TTCCTCGGAGATGGGAGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGAGGTTGAGCTGCACTTGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAGGGCTGCACTTGTTTaGCAAGTGAAGATGGGGAAG +
Preference number: 3 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIRAALV*QVKMGK
Trigger: CTTCCCCATCTTCACTTGCAAAACAAGTGCAGCCCT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 72 bp GATTACAAACGAGTGAGGAAGGGGCACGGGACATTGTaGGGGCCTGAACAGCAGTCAGGCGTCCTCTGTGCA +
Preference number: 3 (lower is better)
Translates to: DYKRVRKGHGTL*GPEQQSGVLCA
Trigger: TGCACAGAGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 72 bp ATCTTGTACCAAACCCTAAATGCTCCGGTGGTGACGTaGACGCGCGTGCACACACACAGACACACGCGTGCA +
Preference number: 3 (lower is better)
Translates to: ILYQTLNAPVVT*TRVHTHRHTRA
Trigger: TGCACGCGTGTGTCTGTGTGTGTGCACGCGCGTGCACGTCACCACCGGAGCATTTAGGGTTTGGTACAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp AGGGGAGGAAGAGGCAGAGAAAGGCTCCCTCTAGGCTaGGTGGTTCTTAGTTCAGCAGAAGGTCTGGATGCC +
Preference number: 3 (lower is better)
Translates to: RGGRGRERLPLG*VVLSSAEGLDA
Trigger: GGCATCCAGACCTTCTGCTGAACTAAGAACCACCCAGCCTAGAGGGAGCCTTTCTCTGCCTCTTCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGGAGGCGGCCTCCGCTaGATGGGTTGTGGAGGTTGG +
Preference number: 3 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIGGGLR*MGCGGW
Trigger: CCAACCTCCACAACCCATCAAGCGGAGGCCGCCTCC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp ATACTGAGTGGCTCGTCTCTCTCTACAGGGTCTGGATaGGTCAGGGTCACACTCACAGGACAGGACAACCCC +
Preference number: 3 (lower is better)
Translates to: ILSGSSLSTGSG*VRVTLTGQDNP
Trigger: GGGGTTGTCCTGTCCTGTGAGTGTGACCCTGACTCATCCAGACCCTGTAGAGAGAGACGAGCCACTCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp CTACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTaGCAGAGGCAGACAGAGGGTTCTTGGAGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: LRALDSALRTRC*QRQTEGSWSFQ
Trigger: CTGAAAACTCCAAGAACCCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp GAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTaGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: ETVVTAEDSYEL*ILRLGLAAGRG
Trigger: GCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCAAGGGGCACGGGACATaGTGCGGGCCTGAACAGCAG +
Preference number: 3 (lower is better)
Translates to: MQQQHSETVVTAEDSYELKGHGT*CGPEQQ
Trigger: CTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp TTACCCAGAACAAAACAGACGGCGATTACAAACGAGTaGGGAAGGGGCACGGGACATTGTGCGGGCCTGAAC +
Preference number: 3 (lower is better)
Translates to: LPRTKQTAITNE*GRGTGHCAGLN
Trigger: GTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGCCGTCTGTTTTGTTCTGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACAGGGCTGCACTTGTTTaGCAAGTGAAGATGGGGAAG +
Preference number: 3 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNRAALV*QVKMGK
Trigger: CTTCCCCATCTTCACTTGCAAAACAAGTGCAGCCCT...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 72 bp TCAGCAGCCAGGCCCCCAGGGATGGTCAAATTAAAGTaGAAATTTGGGTGTGGGGCAGATGAAGGAAACTCC +
Preference number: 3 (lower is better)
Translates to: SAARPPGMVKLK*KFGCGADEGNS
Trigger: GGAGTTTCCTTCATCTGCCCCACACCCAAATTTGCACTTTAATTTGACCATCCCTGGGGGCCTGGCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTACTAGGAATGCAGGTCTaGGTCCCCCTGGACGTGGGC +
Preference number: 3 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLLGMQV*VPLDVG
Trigger: GCCCACGTCCAGGGGGACCAAGACCTGCATTCCTAG...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp TTGTTTGTCATGGATTTCCACTGTCTGAAACGGCTCTaGGCACGCTTGAAGCCCTCGGTTTCCCTGTTCGCT +
Preference number: 3 (lower is better)
Translates to: LFVMDFHCLKRL*ARLKPSVSLFA
Trigger: AGCGAACAGGGAAACCGAGGGCTTCAAGCGTGCTCAGAGCCGTTTCAGACAGTGGAAATCCATGACAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp ATCACAATCGTGTACGATGCTAACAATGGAAGCGACTaGTCGGAATACGAGCCGGTCGTCCAGTCTGAATGC +
Preference number: 3 (lower is better)
Translates to: ITIVYDANNGSD*SEYEPVVQSEC
Trigger: GCATTCAGACTGGACGACCGGCTCGTATTCCGATCAGTCGCTTCCATTGTTAGCATCGTACACGATTGTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 72 bp TCAAAAGGGAGCCCTGGGAACTTCCTCGCAGGAGGCTaGCAGTGGCCTAATTGTTTACAGTATAATGAATGC +
Preference number: 3 (lower is better)
Translates to: SKGSPGNFLAGG*QWPNCLQYNEC
Trigger: GCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGAAGTTCCCAGGGCTCCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp GGGAGCCCTGGGAACTTCCTCGCAGGAGGCTGCCAGTaGCCTAATTGTTTACAGTATAATGAATGCATTTGT +
Preference number: 3 (lower is better)
Translates to: GSPGNFLAGGCQ*PNCLQYNECIC
Trigger: ACAAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGAAGTTCCCAGGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp ATAAATACTGAGTGGCTCGTCTCTCTCTACAGGGTCTaGATGAGTCAGGGTCACACTCACAGGACAGGACAA +
Preference number: 3 (lower is better)
Translates to: INTEWLVSLYRV*MSQGHTHRTGQ
Trigger: TTGTCCTGTCCTGTGAGTGTGACCCTGACTCATCCAGACCCTGTAGAGAGAGACGAGCCACTCAGTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp GGCAGAGGCAGACAGAGGGTTCTTGGAGTTTTCAGTTaGTTCATGGGCCATAGATCTTTTTCCACTTGCTGC +
Preference number: 3 (lower is better)
Translates to: GRGRQRVLGVFS*FMGHRSFSTCC
Trigger: GCAGCAAGTGGAAAAAGATCTATGGCCCATGAACCAACTGAAAACTCCAAGAACCCTCTGTCTGCCTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp GGCTTAGGGATAAAGGTGCAGACATCTCATAAATACTaGGTGGCTCGTCTCTCTCTACAGGGTCTGGATGAG +
Preference number: 3 (lower is better)
Translates to: GLGIKVQTSHKY*VARLSLQGLDE
Trigger: CTCATCCAGACCCTGTAGAGAGAGACGAGCCACTCAGTATTTATGAGATGTCTGCACCTTTATCCCTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR TCA 72 bp AAGCGACTGATCGGAATACGAGCCGGTCGTCCAGTCTaGATGCTTGCGATTCTGCATGATTTTCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: KRLIGIRAGRPV*MLAILHDFPFL
Trigger: AAGGAAAGGAAAATCATGCAGAATCGCAAGCATTCAGACTGGACGACCGGCTCGTATTCCGATCAGTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGAAGGGGCACGGGACATaGTGCGGGCCTGAACAGCAG +
Preference number: 3 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMKGHGT*CGPEQQ
Trigger: CTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTT...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGTCCAGTCTGAATGCTaGCGATTCTGCATGATTTTC +
Preference number: 3 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIVQSEC*RFCMIF
Trigger: GAAAATCATGCAGAATCGCAAGCATTCAGACTGGAC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CCA 72 bp TCCAATGCAAAGTTAAGTGACGACAGAGAACTCGGGTaGACAGACACAATGCGGAAAACAAGACAGAATTCA +
Preference number: 3 (lower is better)
Translates to: SNAKLSDDRELG*TDTMRKTRQNS
Trigger: TGAATTCTGTCTTGTTTTCCGCATTGTGTCTGTCCACCCGAGTTCTCTGTCGTCACTTAACTTTGCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR-3UTR CAA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGCTCTTGCCCACAGCTTaGTCCACATTCAGGGGCAAA +
Preference number: 3 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMLLPTA*STFRGK
Trigger: TTTGCCCCTGAATGTGGACAAAGCTGTGGGCAAGAG...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR GCA 72 bp TTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTaGCATCCAAATCTTCAAGTCAAAAATATTTATACA +
Preference number: 3 (lower is better)
Translates to: FHPKDGCSTCTQ*HPNLQVKNIYT
Trigger: TGTATAAATATTTTTGACTTGAAGATTTGGATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGCGGCCGGCTGCAGCTaGTTGCAGGGGCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHAAGCS*LQGLWG
Trigger: GCCCCAGAGCCCCTGCAACCAGCTGCAGCCGGCCGC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACAGGTCCCTGCATAGGTaGCCTCCGGCCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHRSLHR*PPASGP
Trigger: CGGCCCGGAGGCCGGAGGGCACCTATGCAGGGACCT...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCGGCCACCTCCTGGATaGCCGAGCCAGCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSARPPPG*PSQPRP
Trigger: TGGACGGGGCTGGCTCGGTCATCCAGGAGGTGGCCG...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCCTGGACGTGGGCCCTaGGGAATGGGTGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAPGRGP*GMGGGA
Trigger: GGCCCCTCCACCCATTCCTCAGGGCCCACGTCCAGG...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAGCCCGCGGCAGGAAGTaGTTGGCGTCCCGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLARGRK*LASRRS
Trigger: GGAGCGCCGGGACGCCAAGCACTTCCTGCCGCGGGC...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277554.4
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTCAGGCGTCCTCTGTaGAGCCACCACCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHVRRPL*SHHLRQ
Trigger: CTGCCGGAGGTGGTGGCTGCACAGAGGACGCCTGAC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTGGGGCTGTCGGTGGTaGGCAGGCTGCTGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQAWGCRW*AGCWRL
Trigger: CAGGCGCCAGCAGCCTGCCCACCACCGACAGCCCCA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGGGTCAGCGGTGCCCTaGGGGTCAGGGGACCGAGGG +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLGSAVP*GSGDRG
Trigger: CCCTCGGTCCCCTGACCCCCAGGGCACCGCTGACCC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTGAGACGAGTGGTCCCTaGCCCTGGGCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAETSGP*PWAGEQ
Trigger: CTGCTCCCCCGCCCAGGGCCAGGGACCACTCGTCTC...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGCAAAATGCTCGGCCTaGCCCGCCCGGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLAKCSA*PARGAG
Trigger: CCCTGCGCCCCGGGCGGGCCAGGCCGAGCATTTTGC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACACCTGGACGTGGGCCCTaGGGAATGGGTGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTPGRGP*GMGGGA
Trigger: GGCCCCTCCACCCATTCCTCAGGGCCCACGTCCAGG...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAGGCCCAGCAGGCGCTaGTCGTTCAGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIRPSRR*SFRQPS
Trigger: GCTGGGCTGCCTGAACGAGCAGCGCCTGCTGGGCCT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCACCACCGCCGGCCCCTaGTTCGTCTTCCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSTTAGP*FVFRAG
Trigger: TCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGT...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCGTCAGGCGTCCTCTGTaGAGCCACCACCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGVRRPL*SHHLRQ
Trigger: CTGCCGGAGGTGGTGGCTGCACAGAGGACGCCTGAC...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGCAGAGACACGCACGTaGACACAGACGCGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHAETRT*TQTRVH
Trigger: GTGCACGCGCGTCTGTGTGCACGTGCGTGTCTCTGC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAGCAGCATCTGAGACATaGCGGGCGGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLAASET*RAGSGG
Trigger: CCCGCCGCTGCCCGCCCGCCATGTCTCAGATGCTGC...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACACAGGCTGCTGGCGCCTaGACTGGTCCGCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTQAAGA*TGPLPL
Trigger: CAGGGGGAGCGGACCAGTCCAGGCGCCAGCAGCCTG...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTCCGGCTGGGGTCGCTaGTGGACGAGCGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSASGWGR*WTSGCQ
Trigger: CTGGCATCCGCTCGTCCACCAGCGACCCCAGCCGGA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAAGGTGGAAGGCCCGGTaGGCCTGGCCCCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLRWKAR*AWPRVS
Trigger: GGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCT...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCACACCCCACACAGGTaGAAGGCCCGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAHTPHR*KARWAW
Trigger: CCAGGCCCACCGGGCCTTCCACCTGTGTGGGGTGTG...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCTCCACCCCGAGGGGTaGGCCACAGCCATCACTGCC +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSALHPEG*ATAITA
Trigger: GGCAGTGATGGCTGTGGCCCACCCCTCGGGGTGGAG...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGGGAGTGGGGTGCGCTaGTCGGCCACCGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLGSGVR*SATAHW
Trigger: CCAGTGAGCGGTGGCCGACCAGCGCACCCCACTCCC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCTGGAGGTTGGGGGAGTaGGGTGCGCTGGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIWRLGE*GALVGH
Trigger: GTGGCCGACCAGCGCACCCCACTCCCCCAACCTCCA...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCGCTGGCCGTCATGGTaGGCCTGCCCGTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIRWPSW*ACPCSR
Trigger: TCTGCTACACGGGCAGGCTCACCATGACGGCCAGCG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCATGCCTCTGCACCACTaGGCCACCTGCAGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGMPLHH*ATCSPR
Trigger: CCTAGGGCTGCAGGTGGCTCAGTGGTGCAGAGGCAT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCTCGATCACAGCGGTCTaGGAGTCGCAGTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGSITAV*ESQWGE
Trigger: CTCGCCCCACTGCGACTCGCAGACCGCTGTGATCGA...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGCCGCTCGGCGTAGATaGGTTGCTCGAACACCTGTG +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHAARRR*VARTPV
Trigger: CACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGGCACCCTCCATCCATaGACACCCCTCAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHGTLHP*TPLKAD
Trigger: GTCTGCCTTGAGGGGTGTGCATGGATGGAGGGTGCC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAGCGTCCACAGTGCCTaGCCATGGTCCCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPISVHSA*PWSPTS
Trigger: GGAGGTGGGGGACCATGGGCAGGCACTGTGGACGCT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCTCCATGCAACCCAGCTaGCTCCTGGGCCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGSMQPS*LLGPSP
Trigger: AGGGGATGGGCCCAGGAGGCAGCTGGGTTGCATGGA...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCGCGGCAGGAAGTGCTTaGCGTCCCGGCGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTAAGSA*RPGAPA
Trigger: AGCCGGAGCGCCGGGACGCCAAGCACTTCCTGCCGC...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277554.4
CDS-3UTR CCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACTCGTCCTCCTCGTTGTaGTACGAGGTGGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHSSSSL*YEVGLS
Trigger: CGACAGCCCCACCTCGTACCACAACGAGGAGGACGA...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACACCCCTGCACACAGGTaGCAGTTCATCAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHTPAHR*QFISWP
Trigger: CGGCCAGCTGATGAACTGCCACCTGTGTGCAGGGGT...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCCCAGCGGCTTCCGGCTaGGGTCGCTGGTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTPAASG*GRWWTS
Trigger: GCTCGTCCACCAGCGACCCCAGCCGGAAGCCGCTGG...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGAAGGCCCGGTGGGCCTaGCCCCGAGTCTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQAKARWA*PRVSER
Trigger: TCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTT...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAGACCGACTCTCGCCCTaGCCCAGCCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHADRLSP*PSPGRC
Trigger: GCAGCGGCCAGGGCTGGGCCAGGGCGAGAGTCGGTC...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCAAGGAGGGCTGCCCCTaGACAAGGACACAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGKEGCP*TRTQAS
Trigger: GGAGGCCTGTGTCCTTGTCCAGGGGCAGCCCTCCTT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGCTGGGCCCATCCCCTTaGGGAAGAGGAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQALGPSP*GRGRQG
Trigger: GCCCTGCCTTCCTCTTCCCCAAGGGGATGGGCCCAG...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCTCAGCTGGCCGCGTGTaGTGTAGACCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPISAGRV*CRPQSL
Trigger: CAGGCTCTGGGGTCTACATCACACGCGGCCAGCTGA...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTGGGCAGCCAGCGCTTaGGAACGCGGCGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNWAASA*ERGGRW
Trigger: CCAACGCCCGCCGCGTTCGCAAGCGCTGGCTGCCCA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTTGCTCGAACACCTGTaGCGCGGCAGGCGGGAACTC +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSALLEHL*RGRREL
Trigger: GAGTTCCCGCCTGCCGCGGCACAGGTGTTCGAGCAA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACAGGTCTGGATGCCTCTaGACCACTGAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHRSGCL*TTEPPA
Trigger: TGCAGGTGGCTCAGTGGTGCAGAGGCATCCAGACCT...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACATCACCTACCTGCCCCTaGTCCACCCCGCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTSPTCP*STPRLP
Trigger: AGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGA...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCTCCGGCTGGGGTCGCTaGTGGACGAGCGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTSGWGR*WTSGCQ
Trigger: CTGGCATCCGCTCGTCCACCAGCGACCCCAGCCGGA...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACCAGCGGCTTCCGGCTaGGGTCGCTGGTGGACGAGC +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAPAASG*GRWWTS
Trigger: GCTCGTCCACCAGCGACCCCAGCCGGAAGCCGCTGG...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTACGTCGAAGGCGGGGTTaGCGGCGGCACTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLRRRRG*RRHSGQ
Trigger: TTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACG...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACCAGTGGGAGACGAGTaGTCCCTGGCCCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAPVGDE*SLALGG
Trigger: CCCGCCCAGGGCCAGGGACCACTCGTCTCCCACTGG...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTCTCCGAGGAAGGCTTaGTCCAGGTTCCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSASPRKA*SRFPAG
Trigger: GCCCGCTGGGAACCTGGACCAAGCCTTCCTCGGAGA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCGATGCTAAGGCACTCTaGAAGGCCCCTCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGDAKAL*KAPLSP
Trigger: CGGGCTCAGAGGGGCCTTCCAGAGTGCCTTAGCATC...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCCTGGGCCCATCCCCTTaGGGAAGAGGAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLLGPSP*GRGRQG
Trigger: GCCCTGCCTTCCTCTTCCCCAAGGGGATGGGCCCAG...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCACCTCCGGTCCCTCCTaGACCTCTCCATGCAACCCA +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGTSGPS*TSPCNP
Trigger: TGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGGT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAAGACACGGGGCAGTTTaGGAGGGGCTGTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHARHGAV*EGLCPP
Trigger: CGGCGGGCACAGCCCCTCTCAAACTGCCCCGTGTCT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGCTGGATGCCGGGGATaGGGGTGGCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGAGCRG*GWPGWA
Trigger: TGCCCAGCCTGGCCACCCTCATCCCCGGCATCCAGC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTATCAGCTGGCCGCGTGTaGTGTAGACCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLSAGRV*CRPQSL
Trigger: CAGGCTCTGGGGTCTACATCACACGCGGCCAGCTGA...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGCCTAACGGCCACAGATaGCCCACCCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQAPNGHR*PTPSHG
Trigger: ACCATGGCTTGGGGTGGGTCATCTGTGGCCGTTAGG...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCCCAGGCGGGTCCTGCTaGCCTCTTGCCCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLPGGSC*PLAHSF
Trigger: AAAGCTGTGGGCAAGAGGTCAGCAGGACCCGCCTGG...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAACCACCGCCGGCCCCTaGTTCGTCTTCCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHATTAGP*FVFRAG
Trigger: TCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCCCCTCACCACACCCCTaGACACACACGCACACACAC +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSPSPHP*THTHTH
Trigger: GTGTGTGTGCGTGTGTGTGCAGGGGTGTGGTGAGGG...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGCTCCAACCCCACCTGTaGCCAAGACAGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQALQPHL*PRQGRK
Trigger: CTTCCTCCCCTGTCTTGGGCACAGGTGGGGTTGGAG...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAGGGTCAGCAGCGGGATaGGCACCGAGGGGGACACGA +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAGSAAG*APRGTR
Trigger: TCGTGTCCCCCTCGGTGCCCATCCCGCTGCTGACCC...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCCGGCGGCAGCTCCATaGCTTCATGCTTTACTCGGG +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIPAAAP*LHALLG
Trigger: CCCGAGTAAAGCATGAAGCCATGGAGCTGCCGCCGG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTTGCTGGCGCCTGGACTaGTCCGCTCCCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGCWRLD*SAPPGG
Trigger: ACCCCCAGGGGGAGCGGACCAGTCCAGGCGCCAGCA...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTGGTGGGCAGGCTGCTaGCGCCTGGACTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNWWAGC*RLDWSA
Trigger: AGCGGACCAGTCCAGGCGCCAGCAGCCTGCCCACCA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCCGTTGTGGTACGAGGTaGGGCTGTCGGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLRCGTR*GCRWWA
Trigger: TGCCCACCACCGACAGCCCCACCTCGTACCACAACG...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTCGTCCTCCTCGTTGTaGTACGAGGTGGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSASSSSL*YEVGLS
Trigger: CGACAGCCCCACCTCGTACCACAACGAGGAGGACGA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTTCAGAGCCACGATGGTaGCGGCGTCGCCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGSEPRW*RRRPAA
Trigger: AGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGA...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACATCAAAAGGGAGCCCTaGGAACTTCCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHIKREP*ELPRRR
Trigger: CCTCCTGCGAGGAAGTTCCCAGGGCTCCCTTTTGAT...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACAGCATAATCCCAAAGTaGCTGAGGCGGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHSIIPK*LRRQRA
Trigger: TGCCCTCTGCCGCCTCAGCCACTTTGGGATTATGCT...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCCCCTTTTTCCCCCAGTaGGAGACGAGTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSPFFPQ*ETSGPW
Trigger: CCAGGGACCACTCGTCTCCCACTGGGGGAAAAAGGG...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTGGAGGTTGGGGGAGTaGGGTGCGCTGGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNWRLGE*GALVGH
Trigger: GTGGCCGACCAGCGCACCCCACTCCCCCAACCTCCA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTATCTCCGAGGAAGGCTTaGTCCAGGTTCCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLSPRKA*SRFPAG
Trigger: GCCCGCTGGGAACCTGGACCAAGCCTTCCTCGGAGA...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCTCGATGTGCAGCATCTaGGACATGGCGGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTSMCSI*DMAGGQ
Trigger: CTGCCCGCCCGCCATGTCTCAGATGCTGCACATCGA...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCTACATGACCACGAGCTaGTCGCTGGCCGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIYMTTS*SLAVMV
Trigger: CACCATGACGGCCAGCGAGCAGCTCGTGGTCATGTA...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGACCGGCTGCAGCTGGTTaGAGGGGCTCTGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGPAAAG*RGSGAR
Trigger: CCGAGCCCCAGAGCCCCTGCAACCAGCTGCAGCCGG...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGCCGGCTGCAGCTGGTTaGAGGGGCTCTGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRPAAAG*RGSGAR
Trigger: CCGAGCCCCAGAGCCCCTGCAACCAGCTGCAGCCGG...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCTCTGTCCCCTACCAGTaGCCATACCTCCAACTGCCC +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPISVPYQ*PYLQLP
Trigger: GGGCAGTTGGAGGTATGGGCACTGGTAGGGGACAGA...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCATACACAGACACGCGTaGAGAGACACGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGIHRHA*RDTHVH
Trigger: GTGCACGTGCGTGTCTCTGCACGCGTGTCTGTGTAT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTTGGTGGGCAGGCTGCTaGCGCCTGGACTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGWWAGC*RLDWSA
Trigger: AGCGGACCAGTCCAGGCGCCAGCAGCCTGCCCACCA...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCTCCACCCCGAGGGGTaGGCCACAGCCATCACTGCC +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGLHPEG*ATAITA
Trigger: GGCAGTGATGGCTGTGGCCCACCCCTCGGGGTGGAG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAGAGACGAGTGGTCCCTaGCCCTGGGCGGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGETSGP*PWAGEQ
Trigger: CTGCTCCCCCGCCCAGGGCCAGGGACCACTCGTCTC...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTACCCTTTTTCCCCCAGTaGGAGACGAGTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLPFFPQ*ETSGPW
Trigger: CCAGGGACCACTCGTCTCCCACTGGGGGAAAAAGGG...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCGGACACCTGGGTAGGTaGCCACACCAGCACTTCACA +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSGHLGR*PHQHFT
Trigger: TGTGAAGTGCTGGTGTGGCCACCTACCCAGGTGTCC...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAGGGAGGGACACCTaGGTAGGTGGCCACACCAGC +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLKGRDT*VGGHTS
Trigger: GCTGGTGTGGCCACCTACCCAGGTGTCCCTCCCTTT...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCAAGGAGGGCTGCCCCTaGACAAGGACACAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTKEGCP*TRTQAS
Trigger: GGAGGCCTGTGTCCTTGTCCAGGGGCAGCCCTCCTT...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTCGGCCACCGCTCACTaGCCTGTGTGCACACCGGAG +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNSATAH*PVCTPE
Trigger: CTCCGGTGTGCACACAGGCCAGTGAGCGGTGGCCGA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAGATGCTAAGGCACTCTaGAAGGCCCCTCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLDAKAL*KAPLSP
Trigger: CGGGCTCAGAGGGGCCTTCCAGAGTGCCTTAGCATC...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 72 bp ACCACTGAGCCACCTGCAGCCCTAGGAATGCAGGTCTaGGTCCCCCTGGACGTGGGCCCTGAGGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: TTEPPAALGMQV*VPLDVGPEEWV
Trigger: CACCCATTCCTCAGGGCCCACGTCCAGGGGGACCAAGACCTGCATTCCTAGGGCTGCAGGTGGCTCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTCTTGCTGTTGCCGCTaGACAGGTCGCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSASCCCR*TGRGSR
Trigger: TCTACTTCCGCGACCTGTTCAGCGGCAACAGCAAGA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCCGAGGTCGCGGCGGATaGGGACGCAGGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCRGRGG*GRRSGS
Trigger: AGAGCCGCTCCTGCGTCCTCATCCGCCGCGACCTCG...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCCTGGGGGCGAAGTTCTaGCAGTACAATTTCACAGCG +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGLGAKF*QYNFTA
Trigger: CGCTGTGAAATTGTACTGTCAGAACTTCGCCCCCAG...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGACGGCGGCGGAGCCCATaGCCGTGCGGTACATCTCCA +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGRRRSP*PCGTSP
Trigger: TGGAGATGTACCGCACGGTCATGGGCTCCGCCGCCG...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCCCCAGGTCCGGCCCTaGGCTCAGCTTCACACGTAC +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGPQVRP*AQLHTY
Trigger: GTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACATGCCTCTGCACCACTaGGCCACCTGCAGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNMPLHH*ATCSPR
Trigger: CCTAGGGCTGCAGGTGGCTCAGTGGTGCAGAGGCAT...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCTGGATTTCCACTGTCTaGAACGGCTCTGAGCACGCT +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGWISTV*NGSEHA
Trigger: AGCGTGCTCAGAGCCGTTTCAGACAGTGGAAATCCA...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACTTCCTCGCAGGAGGCTaGCAGTGGCCTAATTGTTTA +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHFLAGG*QWPNCL
Trigger: TAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGAA...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAAGGGGACCGAGGGGCTaGAGAGCCGAGACGGATCGG +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGRGPRG*RAETDR
Trigger: CCGATCCGTCTCGGCTCTGCAGCCCCTCGGTCCCCT...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGCTCACTGGCCTGTGTaGACACCGGAGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGAHWPV*TPEGVL
Trigger: CAGCACCCCCTCCGGTGTGCACACAGGCCAGTGAGC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCGCGCTTAGGACTCGCTaGTGGCAGAGGCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTALRTR*WQRQTE
Trigger: CTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGC...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCTGCTGGCGCCTGGACTaGTCCGCTCCCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCCWRLD*SAPPGG
Trigger: ACCCCCAGGGGGAGCGGACCAGTCCAGGCGCCAGCA...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCTTCCGAGTAGAGCTTaGGATGGCAGCGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSALPSRA*DGSGIR
Trigger: TCGGATACCGCTGCCATCCCAAGCTCTACTCGGAAG...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCCCAGAGAGGTTCCATaGGGAAGGAAGGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIPREVP*GRKEGS
Trigger: TGACCCTTCCTTCCTTCCCCATGGAACCTCTCTGGG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACTTTCAAGTCTTGGGATaGGGGGTTCTTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHFQVLG*GVLLAT
Trigger: TGTGGCCAGAAGAACCCCCCATCCCAAGACTTGAAA...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGTGGGCCCTGAGGAATaGGTGGAGGGGCCGAGGTTA +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNVGPEE*VEGPRL
Trigger: TAACCTCGGCCCCTCCACCCATTCCTCAGGGCCCAC...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCCTTAGGACTCGCTGCTaGCAGAGGCAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLLRTRC*QRQTEG
Trigger: ACCCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAG...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCTGGAGGCTGACCTTGTaGATATCAAAAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGWRLTL*ISKGSP
Trigger: AGGGCTCCCTTTTGATATTCACAAGGTCAGCCTCCA...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACCACTTGTTTTGCAAGTaGAGATGGGGAAGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: CPSGVPRSPGPALSSASHHLFCK*RWGSRV
Trigger: AACTCGGCTTCCCCATCTTCACTTGCAAAACAAGTG...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGCGATTACAAACGAGTaGGGAAGGGGCACGGGACAT +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLAITNE*GRGTGH
Trigger: ATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACAGCGATTACAAACGAGTaGGGAAGGGGCACGGGACAT +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTAITNE*GRGTGH
Trigger: ATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGC...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAACAATGGAAGCGACTaGTCGGAATACGAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPINNGSD*SEYEPV
Trigger: GACCGGCTCGTATTCCGATCAGTCGCTTCCATTGTT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCAACAATGGAAGCGACTaGTCGGAATACGAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSNNGSD*SEYEPV
Trigger: GACCGGCTCGTATTCCGATCAGTCGCTTCCATTGTT...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCCTTATGCTTCACCCCTaGACACAGGTGGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGLMLHP*TQVAVH
Trigger: ATGAACTGCCACCTGTGTGCAGGGGTGAAGCATAAG...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGCGGTCATCCCCTGCCTaGAGCCTCAGGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRRSSPA*SLRHPP
Trigger: TGGAGGGTGCCTGAGGCTGCAGGCAGGGGATGACCG...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCAGGTCTGGATGCCTCTaGACCACTGAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTRSGCL*TTEPPA
Trigger: TGCAGGTGGCTCAGTGGTGCAGAGGCATCCAGACCT...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACCTCCAACCCCACCTGTaGCCAAGACAGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNLQPHL*PRQGRK
Trigger: CTTCCTCCCCTGTCTTGGGCACAGGTGGGGTTGGAG...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGCATCCGAAGGATGGATaGTCTACTTGCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQAHPKDG*STCTQC
Trigger: GCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATG...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGCTGTGTTCCCGAAGTTaGGGATCTCGATGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQALCSRS*GSRCAA
Trigger: TGCTGCACATCGAGATCCCCAACTTCGGGAACACAG...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTAAGGACAGGATCTGCTaGAAGCAGGCGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGKDRIC*KQAGGT
Trigger: CGTGCCGCCCGCCTGCTTCCAGCAGATCCTGTCCTT...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACTGGTTGCAGGGGCTCTaGGGCTCGGAGCCGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNWLQGL*GSEPAS
Trigger: GGACGCCGGCTCCGAGCCCCAGAGCCCCTGCAACCA...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGCCTTGATGTACATCTaGCCGTACTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLALMYI*PYCSST
Trigger: GGTGGAGGAGCAGTACGGCCAGATGTACATCAAGGC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACACCCCTGCACACAGGTaGCAGTTCATCAGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNTPAHR*QFISWP
Trigger: CGGCCAGCTGATGAACTGCCACCTGTGTGCAGGGGT...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACGTGCACGTCCCACAGTaGGCCCGGGCGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNVHVPQ*ARAGQW
Trigger: CCACTGTCCCGCCCGGGCCCACTGTGGGACGTGCAC...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCGGTACATTCAGGACGTaGAGGGAGCACACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLGTFRT*REHTAG
Trigger: ACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTCTCACCCACGGAGCTaGCTGGCTGACATGACAAAA +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASHPRS*LADMTK
Trigger: TTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCAGCCGGCCGTGTACATaGCCACGAGCTGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCSRPCT*PRAARW
Trigger: CCAGCGAGCAGCTCGTGGTCATGTACACGGCCGGCT...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACAGACACGGGGCAGTTTaGGAGGGGCTGTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNRHGAV*EGLCPP
Trigger: CGGCGGGCACAGCCCCTCTCAAACTGCCCCGTGTCT...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCATAAAAATTTCCCTTTaGGGGGAGCCCAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGIKISL*GEPRQY
Trigger: GTACTGCCTGGGCTCCCCTCAAAGGGAAATTTTTAT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCAACAGTAGTTACAGCTaGGGACAGCTACGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSNSSYS*GQLRAL
Trigger: CAGAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTT...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAAGCTCCATGGCTTCATaGTTTACTCGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLSSMAS*FTRVSS
Trigger: GCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCT...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGTTGCTCGAACACCTGTaGCGCGGCAGGCGGGAACTC +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRLLEHL*RGRREL
Trigger: GAGTTCCCGCCTGCCGCGGCACAGGTGTTCGAGCAA...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGTGCTACATCAGCTGTaGACGTCCCACAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGVLHQL*TSHSGP
Trigger: GGGCCCACTGTGGGACGTGCACAGCTGATGTAGCAC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCCGGTCATCCCCTGCCTaGAGCCTCAGGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCRSSPA*SLRHPP
Trigger: TGGAGGGTGCCTGAGGCTGCAGGCAGGGGATGACCG...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGGCAGAGACACGCACGTaGACACAGACGCGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRAETRT*TQTRVH
Trigger: GTGCACGCGCGTCTGTGTGCACGTGCGTGTCTCTGC...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACACATCCGAAGGATGGATaGTCTACTTGCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTHPKDG*STCTQC
Trigger: GCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATG...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACACTGCTCCTCCACCATaGTGTCGTAGGCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNTAPPP*CRRPRR
Trigger: ACGACGAGGCCTACGACACCATGGTGGAGGAGCAGT...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCCGTCGAAGGCGGGGTTaGCGGCGGCACTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCRRRRG*RRHSGQ
Trigger: TTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACG...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGGACTCACGCCCACCGTaGGACACATTAGTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQADSRPP*DTLVQN
Trigger: ATTTTGCACTAATGTGTCCCACGGTGGGCGTGAGTC...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCGACAGAGAACTCGGGTaGACAGACACAATGCGGAAA +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIDRELG*TDTMRK
Trigger: TTTCCGCATTGTGTCTGTCCACCCGAGTTCTCTGTC...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAGACAGCTACGAGCTCTaGATTCTGCGCTTAGGACTC +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLDSYEL*ILRLGL
Trigger: GAGTCCTAAGCGCAGAATCCAGAGCTCGTAGCTGTC...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 72 bp GGAGGGGGTGCTGATGGGCGCAGGGCTGCACTTGTTTaGCAAGTGAAGATGGGGAAGCCGAGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGGADGRRAALV*QVKMGKPSSGG
Trigger: CCCTCCAGAACTCGGCTTCCCCATCTTCACTTGCAAAACAAGTGCAGCCCTGCGCCCATCAGCACCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTCTTGCTGTTGCCGCTaGACAGGTCGCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNSCCCR*TGRGSR
Trigger: TCTACTTCCGCGACCTGTTCAGCGGCAACAGCAAGA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTAGCTGCCGGAGGCCTTaGTGTACATCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGSCRRP*CTSGRT
Trigger: AGTACGGCCAGATGTACATCAAGGCCTCCGGCAGCT...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCCAATGCAAAGTTAAGTaGCGACAGAGAACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIQCKVK*RQRTRV
Trigger: CACCCGAGTTCTCTGTCGTCACTTAACTTTGCATTG...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAACAGTAGTTACAGCTaGGGACAGCTACGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPPARRQLQHGPVPSVLLNSSYS*GQLRAL
Trigger: CAGAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTT...GAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTACATCTGGCCGTACTaGTCCTCCACCATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNYIWPY*SSTMVS
Trigger: CGACACCATGGTGGAGGAGCAGTACGGCCAGATGTA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGCCCTCACCACACCCCTaGACACACACGCACACACAC +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRPSPHP*THTHTH
Trigger: GTGTGTGTGCGTGTGTGTGCAGGGGTGTGGTGAGGG...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAGTGCTACATCAGCTGTaGACGTCCCACAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGVLHQL*TSHSGP
Trigger: GGGCCCACTGTGGGACGTGCACAGCTGATGTAGCAC...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACGCCCATACCTCCAACTaGCCCAGCCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNAHTSN*PSPGLS
Trigger: GGACAGGCCTGGGCTGGGGCAGTTGGAGGTATGGGC...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGACACATTAGTGCAAAATaGTCGGCCTGGCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGHISAK*SAWPAR
Trigger: CCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTG...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAATACACAGACACGCGTaGAGAGACACGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAIHRHA*RDTHVH
Trigger: GTGCACGTGCGTGTCTCTGCACGCGTGTCTGTGTAT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCAGCGGTATCCGATCTaGCTGATGAGGCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGQRYPI*LMRLAG
Trigger: ACCTGCCAGCCTCATCAGCCAGATCGGATACCGCTG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCGCAGGAGGCTGCCAGTaGCCTAATTGTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSAGGCQ*PNCLQY
Trigger: ATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGC...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAATCAAAAGGGAGCCCTaGGAACTTCCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAIKREP*ELPRRR
Trigger: CCTCCTGCGAGGAAGTTCCCAGGGCTCCCTTTTGAT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCAACAAGGACAGGGTGTaGGGGCAGAGTAAAGTACCC +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTNKDRV*GQSKVP
Trigger: GGGTACTTTACTCTGCCCCCACACCCTGTCCTTGTT...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAAGCAACGTATTTTTCTaGAGGGCAGGCATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLSNVFF*RAGMCW
Trigger: CCAGCACATGCCTGCCCTCCAGAAAAATACGTTGCT...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACATCTCTCTACAGGGTCTaGATGAGTCAGGGTCACACT +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTSLYRV*MSQGHT
Trigger: AGTGTGACCCTGACTCATCCAGACCCTGTAGAGAGA...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTATCTCTCTACAGGGTCTaGATGAGTCAGGGTCACACT +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLSLYRV*MSQGHT
Trigger: AGTGTGACCCTGACTCATCCAGACCCTGTAGAGAGA...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTATTCCATCCGAAGGATaGATGCTCTACTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAIPSEG*MLYLHP
Trigger: TGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAAT...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 72 bp GGCGATTACAAACGAGTGAGGAAGGGGCACGGGACATaGTGCGGGCCTGAACAGCAGTCAGGCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GDYKRVRKGHGT*CGPEQQSGVLC
Trigger: ACAGAGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTTCCTCACTCGTTTGTAATCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACTGGGGGCGAAGTTCTaGCAGTACAATTTCACAGCG +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHALGAKF*QYNFTA
Trigger: CGCTGTGAAATTGTACTGTCAGAACTTCGCCCCCAG...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCACATCTCATAAATACTaGGTGGCTCGTCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGTSHKY*VARLSL
Trigger: TAGAGAGAGACGAGCCACTCAGTATTTATGAGATGT...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGTGTCTGAAACGGCTCTaGGCACGCTTGAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRCLKRL*ARLKPS
Trigger: CGAGGGCTTCAAGCGTGCTCAGAGCCGTTTCAGACA...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCGCAGCAAGACCTTATaGTTCACCCCTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGRSKTL*FTPAHR
Trigger: CCTGTGTGCAGGGGTGAAGCATAAGGTCTTGCTGCG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCGGGCACGGGACATTGTaGGGGCCTGAACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCGHGTL*GPEQQS
Trigger: TGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCC...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCGTCGTCCAGTCTGAATaGTTGCGATTCTGCATGATT +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPIVVQSE*LRFCMI
Trigger: AATCATGCAGAATCGCAAGCATTCAGACTGGACGAC...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTCTACTTGCACCCAGTaGCATCCAAATCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSASTCTQ*HPNLQV
Trigger: GACTTGAAGATTTGGATGGCACTGGGTGCAAGTAGA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCGCTCTCCAGCGGCACTaGCTCAGGCTTCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCALQRH*LRLLLH
Trigger: GTGCAAGAGAAGCCTGAGCCAGTGCCGCTGGAGAGC...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTCCCCCACCTCCTTCTaGAAAGCAACGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASPTSF*KATYFS
Trigger: AGAAAAATACGTTGCTTTCCAGAAGGAGGTGGGGGA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAGCACCCACTTTGGAGTaGAGGGCAGAGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGAPTLE*RAERAL
Trigger: AAGGGCTCTCTCTGCCCTCCACTCCAAAGTGGGTGC...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGACAGCTACGAGCTCTaGATTCTGCGCTTAGGACTC +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNDSYEL*ILRLGL
Trigger: GAGTCCTAAGCGCAGAATCCAGAGCTCGTAGCTGTC...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCGAGGTCGCGGCGGATaGGGACGCAGGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIRGRGG*GRRSGS
Trigger: AGAGCCGCTCCTGCGTCCTCATCCGCCGCGACCTCG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCGGCCACCTCCTGGATaGCCGAGCCAGCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIRPPPG*PSQPRP
Trigger: TGGACGGGGCTGGCTCGGTCATCCAGGAGGTGGCCG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACAGCTACACTTGGAGGCTaGCCTTGTGAATATCAAAAG +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTATLGG*PCEYQK
Trigger: CTTTTGATATTCACAAGGTCAGCCTCCAAGTGTAGC...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAAACTCAGTGGTACTGTaGAACCTTCCTTTACAGCAC +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLNSVVL*NLPLQH
Trigger: GTGCTGTAAAGGAAGGTTTCACAGTACCACTGAGTT...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCACGATGTGCTGGATCTaGAGGAAGCCGGCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCTMCWI*RKPAVY
Trigger: GTACACGGCCGGCTTCCTGCAGATCCAGCACATCGT...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTGGGCAGCCAGCGCTTaGGAACGCGGCGGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELWAASA*ERGGRW
Trigger: CCAACGCCCGCCGCGTTCGCAAGCGCTGGCTGCCCA...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCACATTAGTGCAAAATaGTCGGCCTGGCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNHISAK*SAWPAR
Trigger: CCGGGCGGGCCAGGCCGAGCATTTTGCACTAATGTG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCAGCATCTGAGACATaGCGGGCGGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIAASET*RAGSGG
Trigger: CCCGCCGCTGCCCGCCCGCCATGTCTCAGATGCTGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCTGGGGCTGTCGGTGGTaGGCAGGCTGCTGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIWGCRW*AGCWRL
Trigger: CAGGCGCCAGCAGCCTGCCCACCACCGACAGCCCCA...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCACTGCTCCTCCACCATaGTGTCGTAGGCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCTAPPP*CRRPRR
Trigger: ACGACGAGGCCTACGACACCATGGTGGAGGAGCAGT...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCCAGTGGGAGACGAGTaGTCCCTGGCCCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIPVGDE*SLALGG
Trigger: CCCGCCCAGGGCCAGGGACCACTCGTCTCCCACTGG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACATCCCCCACCTCCTTCTaGAAAGCAACGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTSPTSF*KATYFS
Trigger: AGAAAAATACGTTGCTTTCCAGAAGGAGGTGGGGGA...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACACTCATAAATACTGAGTaGCTCGTCTCTCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTLINTE*LVSLYR
Trigger: CCTGTAGAGAGAGACGAGCCACTCAGTATTTATGAG...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCGGCGGCGGAGCCCATaGCCGTGCGGTACATCTCCA +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIRRRSP*PCGTSP
Trigger: TGGAGATGTACCGCACGGTCATGGGCTCCGCCGCCG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGTCTACAGGGTCTGGATaGGTCAGGGTCACACTCACA +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRSTGSG*VRVTLT
Trigger: TGTGAGTGTGACCCTGACTCATCCAGACCCTGTAGA...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCAGGCCCAGCAGGCGCTaGTCGTTCAGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELRPSRR*SFRQPS
Trigger: GCTGGGCTGCCTGAACGAGCAGCGCCTGCTGGGCCT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCAGGGGACCGAGGGGCTaGAGAGCCGAGACGGATCGG +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELRGPRG*RAETDR
Trigger: CCGATCCGTCTCGGCTCTGCAGCCCCTCGGTCCCCT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGTCCCGGTCATCCCCTaGCTGCAGCCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIVPVIP*LQPQAP
Trigger: GGGTGCCTGAGGCTGCAGGCAGGGGATGACCGGGAC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCTTTATCTATAGCTCTTaGCTTCCTTACCCAGAACAA +
Preference number: 4 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGFIYSS*LPYPEQ
Trigger: TTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGACTGTGTTCCCGAAGTTaGGGATCTCGATGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGLCSRS*GSRCAA
Trigger: TGCTGCACATCGAGATCCCCAACTTCGGGAACACAG...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCAGCGGTATCCGATCTaGCTGATGAGGCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNQRYPI*LMRLAG
Trigger: ACCTGCCAGCCTCATCAGCCAGATCGGATACCGCTG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTGACCGACTCTCGCCCTaGCCCAGCCCTGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFDRLSP*PSPGRC
Trigger: GCAGCGGCCAGGGCTGGGCCAGGGCGAGAGTCGGTC...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGATCTCACCCACGGAGCTaGCTGGCTGACATGACAAAA +
Preference number: 4 (lower is better)
Translates to: WAWPRVSERRKNEELGPGSHPRS*LADMTK
Trigger: TTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGA...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGTGGAGGCTGACCTTGTaGATATCAAAAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRWRLTL*ISKGSP
Trigger: AGGGCTCCCTTTTGATATTCACAAGGTCAGCCTCCA...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGCTGGAGGGACAGAGGTaGGCAACAGACATTTCAAGT +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRLEGQR*ATDISS
Trigger: ACTTGAAATGTCTGTTGCTCACCTCTGTCCCTCCAG...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGAGGCGGCCTCCGCTTaGTGGGTTGTGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIEAASA*WVVEVG
Trigger: CCCAACCTCCACAACCCATCAAGCGGAGGCCGCCTC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGGCAGCCCAGGAGGCTaGGTGCTGTCTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELGSPGG*VLSVEA
Trigger: CGCCTCTACAGACAGCACTCAGCCTCCTGGGCTGCC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACGCCGGTCGTCCAGTCTaGATGCTTGCGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNAGRPV*MLAILH
Trigger: ATGCAGAATCGCAAGCATTCAGACTGGACGACCGGC...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCGCAGCAAGACCTTATaGTTCACCCCTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNRSKTL*FTPAHR
Trigger: CCTGTGTGCAGGGGTGAAGCATAAGGTCTTGCTGCG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCCCATACCTCCAACTaGCCCAGCCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIAHTSN*PSPGLS
Trigger: GGACAGGCCTGGGCTGGGGCAGTTGGAGGTATGGGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGCTCACTGGCCTGTGTaGACACCGGAGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELAHWPV*TPEGVL
Trigger: CAGCACCCCCTCCGGTGTGCACACAGGCCAGTGAGC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCAGCGTCCACAGTGCCTaGCCATGGTCCCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELSVHSA*PWSPTS
Trigger: GGAGGTGGGGGACCATGGGCAGGCACTGTGGACGCT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACAATGGTCAAATTAAAGTaGAAATTTGGGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTMVKLK*KFGCGA
Trigger: TGCCCCACACCCAAATTTGCACTTTAATTTGACCAT...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTCAGCAGCCACGCACGTCCACAGACACTCCCGACTCACGCCCACCGTGGGACAGGCTCTAAACACAAATaGCAAAGAATGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSSHARPQTLPTHAHRGTGSKHK*QRMTLP
Trigger: AGGAAGAGTCATTCTTTGGCATTTGTGTTTAGAGCC...TGTCCCACGGTGGGCGTGAGTCGGGAGTGTCTGTGGACGTGCGTGGCTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTAGATCTTTTTCCACTTaGTGCCAAGATGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: APAPRYIQDVEGAHSRSARSFST*CQDVSI
Trigger: TATGGAAACATCTTGGCAGCAAGTGGAAAAAGATCT...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCTCCGGTGGTGACGTaGACGCGCGTGCACACACAC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIAPVVT*TRVHTH
Trigger: GTGTGTGTGCACGCGCGTGCACGTCACCACCGGAGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGCTCCGGTGGTGACGTaGACGCGCGTGCACACACAC +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELAPVVT*TRVHTH
Trigger: GTGTGTGTGCACGCGCGTGCACGTCACCACCGGAGC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTTCAGAGCCACGATGGTaGCGGCGTCGCCCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFSEPRW*RRRPAA
Trigger: AGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGA...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCCTGCTCAAAGGGCTGTaGGGGGCTCTGGCCATCGGC +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELLLKGL*GALAIG
Trigger: GCCGATGGCCAGAGCCCCCCACAGCCCTTTGAGCAG...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCCCAGGGTGCAGCACATaGTCCTCCCCTAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELPGCST*SSPSGG
Trigger: GCCTCCGCTAGGGGAGGACCATGTGCTGCACCCTGG...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGCCTCGCCACAGGGGTaGGCTTCGGGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELASPQG*ASGQKG
Trigger: TCCTTTCTGCCCCGAAGCCCACCCCTGTGGCGAGGC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCCTTGGAGTTTTCAGTTaGTTCATGGGCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTLGVFS*FMGHRS
Trigger: AGATCTATGGCCCATGAACCAACTGAAAACTCCAAG...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACACGGAGCTGGCTGGCTaGCATGACAAAAGTATGCAG +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNTELAG*HDKSMQ
Trigger: CTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGT...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCAGAAGGACAGGATCTaGTGGAAGCAGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIQKDRI*WKQAGG
Trigger: GCCGCCCGCCTGCTTCCAGCAGATCCTGTCCTTCTG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCCTTATGCTTCACCCCTaGACACAGGTGGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCLMLHP*TQVAVH
Trigger: ATGAACTGCCACCTGTGTGCAGGGGTGAAGCATAAG...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCATGGTCAAATTAAAGTaGAAATTTGGGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTMVKLK*KFGCGA
Trigger: TGCCCCACACCCAAATTTGCACTTTAATTTGACCAT...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAACACGAAAAACCTTTaGCATTTTAGAACCATCTTG +
Preference number: 4 (lower is better)
Translates to: PPVPPGPLHATQLPPGPINTKNL*HFRTIL
Trigger: CAAGATGGTTCTAAAATGGCAAAGGTTTTTCGTGTT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTTCTACTTGCACCCAGTaGCATCCAAATCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGSTCTQ*HPNLQV
Trigger: GACTTGAAGATTTGGATGGCACTGGGTGCAAGTAGA...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTCTTCTGGCCACACCTaGGAAGGAGGGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELSSGHT*EGGLPL
Trigger: CAGGGGCAGCCCTCCTTCCCAGGTGTGGCCAGAAGA...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGTGGGCCCTGAGGAATaGGTGGAGGGGCCGAGGTTA +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIVGPEE*VEGPRL
Trigger: TAACCTCGGCCCCTCCACCCATTCCTCAGGGCCCAC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTCTCATAAATACTGAGTaGCTCGTCTCTCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGLINTE*LVSLYR
Trigger: CCTGTAGAGAGAGACGAGCCACTCAGTATTTATGAG...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACTTGGAGTTTTCAGTTaGTTCATGGGCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHALGVFS*FMGHRS
Trigger: AGATCTATGGCCCATGAACCAACTGAAAACTCCAAG...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTGCTGGATGCCGGGGATaGGGGTGGCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICAGCRG*GWPGWA
Trigger: TGCCCAGCCTGGCCACCCTCATCCCCGGCATCCAGC...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTCCCCAGGTCCGGCCCTaGGCTCAGCTTCACACGTAC +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFPQVRP*AQLHTY
Trigger: GTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGG...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCCGCTTACAAGGTCCCTaGATAGGTGCCCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIRLQGP*IGALRP
Trigger: AGGCCGGAGGGCACCTATGCAGGGACCTTGTAAGCG...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGGCACCCTCCATCCATaGACACCCCTCAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIGTLHP*TPLKAD
Trigger: GTCTGCCTTGAGGGGTGTGCATGGATGGAGGGTGCC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGGGCACGGGACATTGTaGGGGCCTGAACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIGHGTL*GPEQQS
Trigger: TGACTGCTGTTCAGGCCCGCACAATGTCCCGTGCCC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCTCTCCAGCGGCACTaGCTCAGGCTTCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIALQRH*LRLLLH
Trigger: GTGCAAGAGAAGCCTGAGCCAGTGCCGCTGGAGAGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAAGGTGGAAGGCCCGGTaGGCCTGGCCCCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQRWKAR*AWPRVS
Trigger: GGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCT...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACCACACCCCACACAGGTaGAAGGCCCGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYHTPHR*KARWAW
Trigger: CCAGGCCCACCGGGCCTTCCACCTGTGTGGGGTGTG...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAGGGAGTGGGGTGCGCTaGTCGGCCACCGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQGSGVR*SATAHW
Trigger: CCAGTGAGCGGTGGCCGACCAGCGCACCCCACTCCC...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAATACAATGTCAGCCATaGCTAAAAAGTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SGVPRSPGPALSSASHVLIQCQP*LKSNSL
Trigger: AAGACTGTTACTTTTTAGCCATGGCTGACATTGTAT...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTATCGATGTGCAGCATCTaGGACATGGCGGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLSMCSI*DMAGGQ
Trigger: CTGCCCGCCCGCCATGTCTCAGATGCTGCACATCGA...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCAGCTGCCGGAGGCCTTaGTGTACATCTGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELSCRRP*CTSGRT
Trigger: AGTACGGCCAGATGTACATCAAGGCCTCCGGCAGCT...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACATAAAAATTTCCCTTTaGGGGGAGCCCAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNIKISL*GEPRQY
Trigger: GTACTGCCTGGGCTCCCCTCAAAGGGAAATTTTTAT...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCATTCAGTTTTAGTTATTaGTACAATGTCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GTFRTWREHTAGPLSSHAFSFSY*YNVSHG
Trigger: GCCATGGCTGACATTGTATCAATAACTAAAACTGAA...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTTCAGTTTTAGTTATTaGTACAATGTCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNFSFSY*YNVSHG
Trigger: GCCATGGCTGACATTGTATCAATAACTAAAACTGAA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTACAGAAGGACAGGATCTaGTGGAAGCAGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLQKDRI*WKQAGG
Trigger: GCCGCCCGCCTGCTTCCAGCAGATCCTGTCCTTCTG...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTATCGATCACAGCGGTCTaGGAGTCGCAGTGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLSITAV*ESQWGE
Trigger: CTCGCCCCACTGCGACTCGCAGACCGCTGTGATCGA...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTTCCATGCAACCCAGCTaGCTCCTGGGCCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFSMQPS*LLGPSP
Trigger: AGGGGATGGGCCCAGGAGGCAGCTGGGTTGCATGGA...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCTCTTTTTCCACTTGCTaGCAAGATGTTTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTSFSTC*QDVSIK
Trigger: TTTTATGGAAACATCTTGGCAGCAAGTGGAAAAAGA...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCGTCGTCCAGTCTGAATaGTTGCGATTCTGCATGATT +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCVVQSE*LRFCMI
Trigger: AATCATGCAGAATCGCAAGCATTCAGACTGGACGAC...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAGGGTCAGCAGCGGGATaGGCACCGAGGGGGACACGA +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQGSAAG*APRGTR
Trigger: TCGTGTCCCCCTCGGTGCCCATCCCGCTGCTGACCC...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTCGTTGTGGTACGAGGTaGGGCTGTCGGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFRCGTR*GCRWWA
Trigger: TGCCCACCACCGACAGCCCCACCTCGTACCACAACG...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAATTCTCAGAGCCACGATaGTGGCGGCGTCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQFSEPR*WRRRPA
Trigger: GGCGGGGCGACGCCGCCACCATCGTGGCTCTGAGAA...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGGGTCAGCGGTGCCCTaGGGGTCAGGGGACCGAGGG +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMGSAVP*GSGDRG
Trigger: CCCTCGGTCCCCTGACCCCCAGGGCACCGCTGACCC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGGGGAAGCCGAGTTCTaGAGGGACAGAGGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELGEAEF*RDRGEQ
Trigger: TTGCTCACCTCTGTCCCTCCAGAACTCGGCTTCCCC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACTTTTCAGTTGGTTCATaGGCCATAGATCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HRWKARWAWPRVSERRKNFSVGS*AIDLFP
Trigger: TGGAAAAAGATCTATGGCCCATGAACCAACTGAAAA...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTAGCCGGCCGTGTACATaGCCACGAGCTGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICSRPCT*PRAARW
Trigger: CCAGCGAGCAGCTCGTGGTCATGTACACGGCCGGCT...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTCCTAACGGCCACAGATaGCCCACCCCAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFPNGHR*PTPSHG
Trigger: ACCATGGCTTGGGGTGGGTCATCTGTGGCCGTTAGG...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTGGCAGCCCAGGAGGCTaGGTGCTGTCTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICGSPGG*VLSVEA
Trigger: CGCCTCTACAGACAGCACTCAGCCTCCTGGGCTGCC...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAGACATTGTGCGGGCCTaGACAGCAGTCAGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLDIVRA*TAVRRP
Trigger: AGGACGCCTGACTGCTGTTCAGGCCCGCACAATGTC...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCCGGTCGTCCAGTCTaGATGCTTGCGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIAGRPV*MLAILH
Trigger: ATGCAGAATCGCAAGCATTCAGACTGGACGACCGGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAGGCTCTGAGCACGCTTaGAGCCCTCGGTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLGSEHA*SPRFPC
Trigger: ACAGGGAAACCGAGGGCTTCAAGCGTGCTCAGAGCC...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCTACATCTGGCCGTACTaGTCCTCCACCATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIYIWPY*SSTMVS
Trigger: CGACACCATGGTGGAGGAGCAGTACGGCCAGATGTA...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGCTGGAGCCTGAGCCCTaGCCCGTCGCCCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMLEPEP*PVAPER
Trigger: CCTCTCTGGGGCGACGGGGCAGGGCTCAGGCTCCAG...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGTGGTTGCAGGGGCTCTaGGGCTCGGAGCCGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMWLQGL*GSEPAS
Trigger: GGACGCCGGCTCCGAGCCCCAGAGCCCCTGCAACCA...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTACCGGCGGCAGCTCCATaGCTTCATGCTTTACTCGGG +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLPAAAP*LHALLG
Trigger: CCCGAGTAAAGCATGAAGCCATGGAGCTGCCGCCGG...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGCCTTGATGTACATCTaGCCGTACTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIALMYI*PYCSST
Trigger: GGTGGAGGAGCAGTACGGCCAGATGTACATCAAGGC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTCTGCTCAAAGGGCTGTaGGGGGCTCTGGCCATCGGC +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICLLKGL*GALAIG
Trigger: GCCGATGGCCAGAGCCCCCCACAGCCCTTTGAGCAG...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTAAGGCCCGGTGGGCCTaGCCCCGAGTCTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICKARWA*PRVSER
Trigger: TCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTT...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGTGCACGTCCCACAGTaGGCCCGGGCGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMVHVPQ*ARAGQW
Trigger: CCACTGTCCCGCCCGGGCCCACTGTGGGACGTGCAC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAACCAGGGTGCAGCACATaGTCCTCCCCTAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQPGCST*SSPSGG
Trigger: GCCTCCGCTAGGGGAGGACCATGTGCTGCACCCTGG...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGGTACATTCAGGACGTaGAGGGAGCACACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELGTFRT*REHTAG
Trigger: ACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCTCTACAGGGTCTGGATaGGTCAGGGTCACACTCACA +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAISTGSG*VRVTLT
Trigger: TGTGAGTGTGACCCTGACTCATCCAGACCCTGTAGA...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTCCAGGCGGGTCCTGCTaGCCTCTTGCCCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICPGGSC*PLAHSF
Trigger: AAAGCTGTGGGCAAGAGGTCAGCAGGACCCGCCTGG...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCACGGAGCTGGCTGGCTaGCATGACAAAAGTATGCAG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAITELAG*HDKSMQ
Trigger: CTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGT...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTGGATTTCCACTGTCTaGAACGGCTCTGAGCACGCT +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELWISTV*NGSEHA
Trigger: AGCGTGCTCAGAGCCGTTTCAGACAGTGGAAATCCA...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGTCCCGGTCATCCCCTaGCTGCAGCCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMVPVIP*LQPQAP
Trigger: GGGTGCCTGAGGCTGCAGGCAGGGGATGACCGGGAC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACGCGCTTAGGACTCGCTaGTGGCAGAGGCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYALRTR*WQRQTE
Trigger: CTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGC...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAAAGGACAGGATCTGCTaGAAGCAGGCGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQKDRIC*KQAGGT
Trigger: CGTGCCGCCCGCCTGCTTCCAGCAGATCCTGTCCTT...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGAGTTCAGTAGGTAAGTaGCTTGATCACATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: YELWILRLGLAAGRGRQRSSVGK*LDHICL
Trigger: CAAACAAATGTGATCAAGCCACTTACCTACTGAACT...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACCAGACAGAGGGTTCTTaGAGTTTTCAGTTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNQTEGS*SFQLVH
Trigger: ATGAACCAACTGAAAACTCCAAGAACCCTCTGTCTG...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAGGCTCTGAGCACGCTTaGAGCCCTCGGTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQGSEHA*SPRFPC
Trigger: ACAGGGAAACCGAGGGCTTCAAGCGTGCTCAGAGCC...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTGCCGCTCGGCGTAGATaGGTTGCTCGAACACCTGTG +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICAARRR*VARTPV
Trigger: CACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGC...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCTTCCTCGCAGGAGGCTaGCAGTGGCCTAATTGTTTA +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIFLAGG*QWPNCL
Trigger: TAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGAA...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGTCACCTACCTGCCCCTaGTCCACCCCGCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMSPTCP*STPRLP
Trigger: AGGAAGCCGCGGGGTGGAGCAGGGGCAGGTAGGTGA...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCGAATGCTTGCGATTCTaGATGATTTTCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCECLRF*MIFLSF
Trigger: AAAGGAAAGGAAAATCATGCAGAATCGCAAGCATTC...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTTTCAAGTCTTGGGATaGGGGGTTCTTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELFQVLG*GVLLAT
Trigger: TGTGGCCAGAAGAACCCCCCATCCCAAGACTTGAAA...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGTCGGCCACCGCTCACTaGCCTGTGTGCACACCGGAG +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMSATAH*PVCTPE
Trigger: CTCCGGTGTGCACACAGGCCAGTGAGCGGTGGCCGA...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCGACTCACGCCCACCGTaGGACACATTAGTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIDSRPP*DTLVQN
Trigger: ATTTTGCACTAATGTGTCCCACGGTGGGCGTGAGTC...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAACCTCCGGTCCCTCCTaGACCTCTCCATGCAACCCA +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQTSGPS*TSPCNP
Trigger: TGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGGT...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCGACAGAGAACTCGGGTaGACAGACACAATGCGGAAA +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELDRELG*TDTMRK
Trigger: TTTCCGCATTGTGTCTGTCCACCCGAGTTCTCTGTC...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCCAATGCAAAGTTAAGTaGCGACAGAGAACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: MQQQHSETVVTAEDSYELQCKVK*RQRTRV
Trigger: CACCCGAGTTCTCTGTCGTCACTTAACTTTGCATTG...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTTGTCTGAAACGGCTCTaGGCACGCTTGAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICCLKRL*ARLKPS
Trigger: CGAGGGCTTCAAGCGTGCTCAGAGCCGTTTCAGACA...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAATCTGTCCCCTACCAGTaGCCATACCTCCAACTGCCC +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQSVPYQ*PYLQLP
Trigger: GGGCAGTTGGAGGTATGGGCACTGGTAGGGGACAGA...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACTTTATCTATAGCTCTTaGCTTCCTTACCCAGAACAA +
Preference number: 4 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNFIYSS*LPYPEQ
Trigger: TTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAAGGACACCTGGGTAGGTaGCCACACCAGCACTTCACA +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQGHLGR*PHQHFT
Trigger: TGTGAAGTGCTGGTGTGGCCACCTACCCAGGTGTCC...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAAGGCTCCCTCTAGGCTaGGTGGTTCTTAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLRLPLG*VVLSSA
Trigger: TGCTGAACTAAGAACCACCCAGCCTAGAGGGAGCCT...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTCTTAGGACTCGCTGCTaGCAGAGGCAGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICLRTRC*QRQTEG
Trigger: ACCCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAG...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAGCTCCATGGCTTCATaGTTTACTCGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYSSMAS*FTRVSS
Trigger: GCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCT...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTCTTCCGAGTAGAGCTTaGGATGGCAGCGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICLPSRA*DGSGIR
Trigger: TCGGATACCGCTGCCATCCCAAGCTCTACTCGGAAG...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGAAAGGGAGGGACACCTaGGTAGGTGGCCACACCAGC +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMKGRDT*VGGHTS
Trigger: GCTGGTGTGGCCACCTACCCAGGTGTCCCTCCCTTT...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGTACATGACCACGAGCTaGTCGCTGGCCGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMYMTTS*SLAVMV
Trigger: CACCATGACGGCCAGCGAGCAGCTCGTGGTCATGTA...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTCAGAGGGAACTCAAGTaGAGCTCAACCTCACCTACC +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICQRELK*SSTSPT
Trigger: GGTAGGTGAGGTTGAGCTGCACTTGAGTTCCCTCTG...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTGCAGGAGGCTGCCAGTaGCCTAATTGTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFAGGCQ*PNCLQY
Trigger: ATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGC...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGCACCCACTTTGGAGTaGAGGGCAGAGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMAPTLE*RAERAL
Trigger: AAGGGCTCTCTCTGCCCTCCACTCCAAAGTGGGTGC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTCTAAGCATCTGTGGCTaGAATCTAACTCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFLSICG*NLTQWY
Trigger: GTACCACTGAGTTAGATTTCAGCCACAGATGCTTAG...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACCTAAGCATCTGTGGCTaGAATCTAACTCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYLSICG*NLTQWY
Trigger: GTACCACTGAGTTAGATTTCAGCCACAGATGCTTAG...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGCAGAGGGAACTCAAGTaGAGCTCAACCTCACCTACC +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMQRELK*SSTSPT
Trigger: GGTAGGTGAGGTTGAGCTGCACTTGAGTTCCCTCTG...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGAACAAGGACAGGGTGTaGGGGCAGAGTAAAGTACCC +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMNKDRV*GQSKVP
Trigger: GGGTACTTTACTCTGCCCCCACACCCTGTCCTTGTT...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGAGGCTCCCTCTAGGCTaGGTGGTTCTTAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMRLPLG*VVLSSA
Trigger: TGCTGAACTAAGAACCACCCAGCCTAGAGGGAGCCT...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTATTCCATCCGAAGGATaGATGCTCTACTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICIPSEG*MLYLHP
Trigger: TGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAAT...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
3UTR CAA 72 bp TTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTaGCACCCAGTGCCATCCAAATCTTCAAGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: FPNIPSEGWMLY*HPVPSKSSSQK
Trigger: TTTTTGACTTGAAGATTTGGATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCAACACGAAAAACCTTTaGCATTTTAGAACCATCTTG +
Preference number: 4 (lower is better)
Translates to: FSKHSIRRMDALLAPSAINTKNL*HFRTIL
Trigger: CAAGATGGTTCTAAAATGGCAAAGGTTTTTCGTGTT...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTACATCTCATAAATACTaGGTGGCTCGTCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICTSHKY*VARLSL
Trigger: TAGAGAGAGACGAGCCACTCAGTATTTATGAGATGT...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAAGATCTTTTTCCACTTaGTGCCAAGATGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLRSFST*CQDVSI
Trigger: TATGGAAACATCTTGGCAGCAAGTGGAAAAAGATCT...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTCAGACAGAGGGTTCTTaGAGTTTTCAGTTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICQTEGS*SFQLVH
Trigger: ATGAACCAACTGAAAACTCCAAGAACCCTCTGTCTG...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTTTTCCTTGGGAAAAATaGTCAAAGGATGCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICFPWEK*SKDAKA
Trigger: TGCCTTAGCATCCTTTGATCATTTTTCCCAAGGAAA...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR TCA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAATTTCCTTGGGAAAAATaGTCAAAGGATGCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQFPWEK*SKDAKA
Trigger: TGCCTTAGCATCCTTTGATCATTTTTCCCAAGGAAA...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTGGCTCTAAACACAAATaGCAAAGAATGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICGSKHK*QRMTLP
Trigger: AGGAAGAGTCATTCTTTGGCATTTGTGTTTAGAGCC...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTATACAATGTCAGCCATaGCTAAAAAGTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFIQCQP*LKSNSL
Trigger: AAGACTGTTACTTTTTAGCCATGGCTGACATTGTAT...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTAGTTCAGTAGGTAAGTaGCTTGATCACATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICSSVGK*LDHICL
Trigger: CAAACAAATGTGATCAAGCCACTTACCTACTGAACT...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTTTTTCAGTTGGTTCATaGGCCATAGATCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICFSVGS*AIDLFP
Trigger: TGGAAAAAGATCTATGGCCCATGAACCAACTGAAAA...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR GCA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTTCTTTTTCCACTTGCTaGCAAGATGTTTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICSFSTC*QDVSIK
Trigger: TTTTATGGAAACATCTTGGCAGCAAGTGGAAAAAGA...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 90 bp TCTGGCCATCGGCGGGCAGCGGCTCGGGGGCGGCCACCTCCTGGATaGCCGAGCCAGCCCCGTCCACCTCCTCGCCGGCGTCGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: SGHRRAAARGRPPPG*PSQPRPPPRRRRRR
Trigger: CCGCCTTCGACGCCGGCGAGGAGGTGGACGGGGCTGGCTCGGTCATCCAGGAGGTGGCCGCCCCCGAGCCGCTGCCCGCCGATGGCCAGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 90 bp GCGGGCGCTTGGGGGCCAGGCCTGGGCCGGCCGGCGGCAGCTCCATaGCTTCATGCTTTACTCGGGTCAGCAGCGGGATGGGCACCGAGG +
Preference number: 5 (lower is better)
Translates to: AGAWGPGLGRPAAAP*LHALLGSAAGWAPR
Trigger: CCTCGGTGCCCATCCCGCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCTGCCGCCGGCCGGCCCAGGCCTGGCCCCCAAGCGCCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 90 bp GCGGCAGCTCCATGGCTTCATGCTTTACTCGGGTCAGCAGCGGGATaGGCACCGAGGGGGACACGACGTAGGGGGCCGCGGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: AAAPWLHALLGSAAG*APRGTRRRGPRRRR
Trigger: CCGCCGCCGCCGCGGCCCCCTACGTCGTGTCCCCCTCGGTGCCCATCCCGCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCTGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGCGTCGAAGGCGGGGTaGGCGGCGGCACTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: CPSGVPRSPGPALSSASHASKAG*AAALRS
Trigger: TGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS GCA 90 bp TTGGGGGCCAGGCCTGGGCCGGCCGGCGGCAGCTCCATGGCTTCATaGTTTACTCGGGTCAGCAGCGGGATGGGCACCGAGGGGGACACG +
Preference number: 5 (lower is better)
Translates to: LGARPGPAGGSSMAS*FTRVSSGMGTEGDT
Trigger: CGTGTCCCCCTCGGTGCCCATCCCGCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCTGCCGCCGGCCGGCCCAGGCCTGGCCCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS GCA 90 bp TCAGAGCCACGATGGTGGCGGCGTCGCCCCGCCGCTCGGCGTAGATaGGTTGCTCGAACACCTGTGCCGCGGCAGGCGGGAACTCGGGGT +
Preference number: 5 (lower is better)
Translates to: SEPRWWRRRPAARRR*VARTPVPRQAGTRG
Trigger: ACCCCGAGTTCCCGCCTGCCGCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTACGCGGCAGGAAGTGCTaGGCGTCCCGGCGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SGVPRSPGPALSSASHVLRGRKC*ASRRSG
Trigger: GCCGGAGCGCCGGGACGCCAAGCACTTCCTGCCGCG...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277554.4
CDS CCA 90 bp CCGAGCCAGCCCCGTCCACCTCCTCGCCGGCGTCGAAGGCGGGGTTaGCGGCGGCACTCAGGTCAACATTCACGGCGTCAGTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PSQPRPPPRRRRRRG*RRHSGQHSRRQFSE
Trigger: CTCTGAGAACTGACGCCGTGAATGTTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGCCGGCGAGGAGGTGGACGGGGCTGGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 90 bp CCAGAGCTGGGTTCCAGGGTGGCAGGAGGCCCCTCGATGGGCTTGTaGGCAAGGAAGAGGCCCCTGCCGGTCACACTGAGGTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: PELGSRVAGGPSMGL*ARKRPLPVTLRSLL
Trigger: CAGGAGGGACCTCAGTGTGACCGGCAGGGGCCTCTTCCTTGCTCACAAGCCCATCGAGGGGCCTCCTGCCACCCTGGAACCCAGCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467669.1
CDS-3UTR CAA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGTCCGGCAGCATGGACTaGATCTTGGGCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASGSMD*ILGSQR
Trigger: GCGCTGGCTGCCCAAGATCAAGTCCATGCTGCCGGA...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TGCCCGAGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGGTCCTGCTGACCTCTaGCCCACAGCTTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: CPSGVPRSPGPALSSASHGPADL*PTALST
Trigger: TGTGGACAAAGCTGTGGGCAAGAGGTCAGCAGGACC...GTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCTCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 90 bp CGGCACTCAGGTCAACATTCACGGCGTCAGTTCTCAGAGCCACGATaGTGGCGGCGTCGCCCCGCCGCTCGGCGTAGATGCGTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: RHSGQHSRRQFSEPR*WRRRPAARRRCVAR
Trigger: TCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGAGAACTGACGCCGTGAATGTTGACCTGAGTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGAGCTCGAAGGCGCTCTaGCTGTTGCCGCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASSKAL*LLPLNR
Trigger: CCTGTTCAGCGGCAACAGCAAGAGCGCCTTCGAGCT...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAGCCGGCTGCAGCTGGTaGCAGGGGCTCTGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: WAWPRVSERRKNEELGPGAGCSW*QGLWGS
Trigger: CGAGCCCCAGAGCCCCTGCAACCAGCTGCAGCCGGC...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp AGCGGAGTCCCCCGCTCCCCAGGTCCGGCCCTGAGCTCAGCTTCACACGTACTAATCTCCGAGGAAGGCTaGGTCCAGGTTCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: SGVPRSPGPALSSASHVLISEEG*VQVPSG
Trigger: CCCGCTGGGAACCTGGACCAAGCCTTCCTCGGAGAT...TAGTACGTGTGAAGCTGAGCTCAGGGCCGGACCTGGGGAGCGGGGGACTCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GCCCCCGCCCCACGGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTTGGCTCAGGCTTCTCTaGCACTGCATAGCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: APAPRYIQDVEGAHSRSAWLRLL*HCIAAG
Trigger: TCCGGCAGCTATGCAGTGCAAGAGAAGCCTGAGCCA...AGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACCGTGGGGCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TCCTATGTTCTAGGAGCCCCGACCCGCAGTCACCAACGCCGGCACCCCCAGGCGAGCATGGACTTGATCTaGGGCAGCCAGCGCTTGCGA +
Preference number: 5 (lower is better)
Translates to: SYVLGAPTRSHQRRHPQASMDLI*GSQRLR
Trigger: TCGCAAGCGCTGGCTGCCCAAGATCAAGTCCATGCT...CGCCTGGGGGTGCCGGCGTTGGTGACTGCGGGTCGGGGCTCCTAGAACATAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAGCGTCGAAGGCGGGGTaGGCGGCGGCACTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: WAWPRVSERRKNEELGPGASKAG*AAALRS
Trigger: TGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGC...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CACAGGTGGAAGGCCCGGTGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGGAGGCGGCCTCCGCTaGATGGGTTGTGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: HRWKARWAWPRVSERRKNGGGLR*MGCGGW
Trigger: CCAACCTCCACAACCCATCAAGCGGAGGCCGCCTCC...GTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCACCGGGCCTTCCACCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 90 bp CACTCAGGTCAACATTCACGGCGTCAGTTCTCAGAGCCACGATGGTaGCGGCGTCGCCCCGCCGCTCGGCGTAGATGCGTTGCTCGAACA +
Preference number: 5 (lower is better)
Translates to: HSGQHSRRQFSEPRW*RRRPAARRRCVART
Trigger: TGTTCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGAGAACTGACGCCGTGAATGTTGACCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACGCCGGCTGCAGCTGGTaGCAGGGGCTCTGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNAGCSW*QGLWGS
Trigger: CGAGCCCCAGAGCCCCTGCAACCAGCTGCAGCCGGC...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGGAGACACGGGGCAGTTaGAGAGGGGCTGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: YELWILRLGLAAGRGRQRETRGS*RGAVPA
Trigger: GGCGGGCACAGCCCCTCTCAAACTGCCCCGTGTCTC...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACTCGGCGTAGATGCGTaGCTCGAACACCTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: GTFRTWREHTAGPLSSHALGVDA*LEHLCR
Trigger: GCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAG...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCACTAGGAATGCAGGTCTaGGTCCCCCTGGACGTGGGC +
Preference number: 5 (lower is better)
Translates to: GTFRTWREHTAGPLSSHALGMQV*VPLDVG
Trigger: GCCCACGTCCAGGGGGACCAAGACCTGCATTCCTAG...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCCTCTTGCCCACAGCTTaGTCCACATTCAGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGLLPTA*STFRGK
Trigger: TTTGCCCCTGAATGTGGACAAAGCTGTGGGCAAGAG...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCGAGACACGGGGCAGTTaGAGAGGGGCTGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCETRGS*RGAVPA
Trigger: GGCGGGCACAGCCCCTCTCAAACTGCCCCGTGTCTC...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGAAAGGCGCTCTTGCTGTaGCCGCTGAACAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: WAWPRVSERRKNEELGPGKALLL*PLNRSR
Trigger: CCGCGACCTGTTCAGCGGCAACAGCAAGAGCGCCTT...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGCTCGGCGTAGATGCGTaGCTCGAACACCTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: YELWILRLGLAAGRGRQRLGVDA*LEHLCR
Trigger: GCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAG...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GGTACATTCAGGACGTGGAGGGAGCACACAGCAGGTCCGCTCAGCAGCCACGCAACTGTGTTCCCGAAGTaGGGGATCTCGATGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GTFRTWREHTAGPLSSHATVFPK*GISMCS
Trigger: GCTGCACATCGAGATCCCCAACTTCGGGAACACAGT...TGCGTGGCTGCTGAGCGGACCTGCTGTGTGCTCCCTCCACGTCCTGAATGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CAGGCCCACCACCTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCCATAAAAATTTCCCTTaGAGGGGAGCCCAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: QAHHLPGGSSNTVQSLLSHKNFP*RGAQAV
Trigger: TACTGCCTGGGCTCCCCTCAAAGGGAAATTTTTATG...GGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAGGTGGTGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp ACAGACCACCGCCGGCCCCTGCTTCGTCTTCCGGGCAGGAGGAGCAGGAAGGGCGTCCAGTCTGAATGCTaGCGATTCTGCATGATTTTC +
Preference number: 5 (lower is better)
Translates to: TDHRRPLLRLPGRRSRKGVQSEC*RFCMIF
Trigger: GAAAATCATGCAGAATCGCAAGCATTCAGACTGGAC...GCCCTTCCTGCTCCTCCTGCCCGGAAGACGAAGCAGGGGCCGGCGGTGGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TGGGCCTGGCCCCGAGTCTCCGAAAGAAGGAAAAACGAGGAGTTAGGCCCTGGATTGAAGGCCTGGCCCTaGACCACGATGGACACATCG +
Preference number: 5 (lower is better)
Translates to: WAWPRVSERRKNEELGPGLKAWP*TTMDTS
Trigger: CGATGTGTCCATCGTGGTCAAGGGCCAGGCCTTCAA...TCCAGGGCCTAACTCCTCGTTTTTCCTTCTTTCGGAGACTCGGGGCCAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGAGCATGGACTTGATCTaGGGCAGCCAGCGCTTGCGA +
Preference number: 5 (lower is better)
Translates to: YELWILRLGLAAGRGRQRSMDLI*GSQRLR
Trigger: TCGCAAGCGCTGGCTGCCCAAGATCAAGTCCATGCT...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GTGGGCTTCGGGGCAGAAAGGAGCCGCCCAGTGGGAATGCGTCTAACCCACACCCATAAAAATTTCCCTTaGAGGGGAGCCCAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: VGFGAERSRPVGMRLTHTHKNFP*RGAQAV
Trigger: TACTGCCTGGGCTCCCCTCAAAGGGAAATTTTTATG...GGTGTGGGTTAGACGCATTCCCACTGGGCGGCTCCTTTCTGCCCCGAAGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CCTCCGGTCCCTCCTGGACCTCTCCATGCAACCCAGCTGCCTCCTGGGCCCATCAATGATCACATCCTTTaGTTTGTCATGGATTTCCAC +
Preference number: 5 (lower is better)
Translates to: PPVPPGPLHATQLPPGPINDHIL*FVMDFH
Trigger: GTGGAAATCCATGACAAACAAAAGGATGTGATCATT...GATGGGCCCAGGAGGCAGCTGGGTTGCATGGAGAGGTCCAGGAGGGACCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 90 bp TCTTGCACCTCTGCAGGAGCTGAGCTTCAAGGTCCAGGCTACAACTaGGCTTTAACGGAGAACCCGCAGAGAGACTTGTTCATGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SCTSAGAELQGPGYN*ALTENPQRDLFMAE
Trigger: CTCTGCCATGAACAAGTCTCTCTGCGGGTTCTCCGTTAAAGCCCAGTTGTAGCCTGGACCTTGAAGCTCAGCTCCTGCAGAGGTGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467669.1
CDS-3UTR CAA 90 bp ATGCAGCAGCAACATTCTGAAACAGTAGTTACAGCTGAGGACAGCTACGAGCTCTCCTCGTCCTCCTCGTaGTGGTACGAGGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: MQQQHSETVVTAEDSYELSSSSS*WYEVGL
Trigger: CAGCCCCACCTCGTACCACAACGAGGAGGACGAGGA...GAGCTCGTAGCTGTCCTCAGCTGTAACTACTGTTTCAGAATGTTGCTGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CCCAACATGATCCCTAACCCTCTGTCCCCTACCAGTGCCCATACCTCCAACTGCAGGGCTGCACTTGTTTaGCAAGTGAAGATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PNMIPNPLSPTSAHTSNCRAALV*QVKMGK
Trigger: CTTCCCCATCTTCACTTGCAAAACAAGTGCAGCCCT...GCAGTTGGAGGTATGGGCACTGGTAGGGGACAGAGGGTTAGGGATCATGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TTTTCCAAACATTCCATCCGAAGGATGGATGCTCTACTTGCACCCAGTGCCATCATCTCCGAGGAAGGCTaGGTCCAGGTTCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: FSKHSIRRMDALLAPSAIISEEG*VQVPSG
Trigger: CCCGCTGGGAACCTGGACCAAGCCTTCCTCGGAGAT...GATGGCACTGGGTGCAAGTAGAGCATCCATCCTTCGGATGGAATGTTTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CTGCCAGGCGGCAGCTCCAACACGGTCCAGTCCCTTCTGTCCTCCTCAAAAGGTGTCCAGTCTGAATGCTaGCGATTCTGCATGATTTTC +
Preference number: 5 (lower is better)
Translates to: LPGGSSNTVQSLLSSSKGVQSEC*RFCMIF
Trigger: GAAAATCATGCAGAATCGCAAGCATTCAGACTGGAC...ACCTTTTGAGGAGGACAGAAGGGACTGGACCGTGTTGGAGCTGCCGCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAAAGGCGCTCTTGCTGTaGCCGCTGAACAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLKALLL*PLNRSR
Trigger: CCGCGACCTGTTCAGCGGCAACAGCAAGAGCGCCTT...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTAAGGGGCACGGGACATaGTGCGGGCCTGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFKGHGT*CGPEQQ
Trigger: CTGCTGTTCAGGCCCGCACAATGTCCCGTGCCCCTT...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTAGCTCGAAGGCGCTCTaGCTGTTGCCGCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFSSKAL*LLPLNR
Trigger: CCTGTTCAGCGGCAACAGCAAGAGCGCCTTCGAGCT...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACTCCGGCAGCATGGACTaGATCTTGGGCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYSGSMD*ILGSQR
Trigger: GCGCTGGCTGCCCAAGATCAAGTCCATGCTGCCGGA...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTGGAGGCGGCCTCCGCTaGATGGGTTGTGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICGGGLR*MGCGGW
Trigger: CCAACCTCCACAACCCATCAAGCGGAGGCCGCCTCC...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACCTAGGAATGCAGGTCTaGGTCCCCCTGGACGTGGGC +
Preference number: 5 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYLGMQV*VPLDVG
Trigger: GCCCACGTCCAGGGGGACCAAGACCTGCATTCCTAG...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TCCTCGCAGGAGGCTGCCAGTGGCCTAATTGTTTACAGTATAATGAATGCATTTTGGCTCAGGCTTCTCTaGCACTGCATAGCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: SSQEAASGLIVYSIMNAFWLRLL*HCIAAG
Trigger: TCCGGCAGCTATGCAGTGCAAGAGAAGCCTGAGCCA...AAATGCATTCATTATACTGTAAACAATTAGGCCACTGGCAGCCTCCTGCGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TACGAGCTCTGGATTCTGCGCTTAGGACTCGCTGCTGGCAGAGGCAGACAGAGGAATGATCACATCCTTTaGTTTGTCATGGATTTCCAC +
Preference number: 5 (lower is better)
Translates to: YELWILRLGLAAGRGRQRNDHIL*FVMDFH
Trigger: GTGGAAATCCATGACAAACAAAAGGATGTGATCATT...CCTCTGTCTGCCTCTGCCAGCAGCGAGTCCTAAGCGCAGAATCCAGAGCTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTAACTGTGTTCCCGAAGTaGGGGATCTCGATGTGCAGC +
Preference number: 5 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLTVFPK*GISMCS
Trigger: GCTGCACATCGAGATCCCCAACTTCGGGAACACAGT...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CACTCTCACCCACGGAGCTGGCTGGCTGACATGACAAAAGTATGCAGCAGCAACTATAGGATATGCGTATaGCTAATAGTCAGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: HSHPRSWLADMTKVCSSNYRICV*LIVRLR
Trigger: CCTAAGCCTGACTATTAGCAATACGCATATCCTATA...GTTGCTGCTGCATACTTTTGTCATGTCAGCCAGCCAGCTCCGTGGGTGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TTTTTCTCAGGCAACAGTAGCAGTTCAGTAGGTAAGTGGCTTGATCACATTTGTTTGAAGGCCTGGCCCTaGACCACGATGGACACATCG +
Preference number: 5 (lower is better)
Translates to: FFSGNSSSSVGKWLDHICLKAWP*TTMDTS
Trigger: CGATGTGTCCATCGTGGTCAAGGGCCAGGCCTTCAA...ACAAATGTGATCAAGCCACTTACCTACTGAACTGCTACTGTTGCCTGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GTTTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAGGGCTGCACTTGTTTaGCAAGTGAAGATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: VLSIALAFLTQNKTDGDYRAALV*QVKMGK
Trigger: CTTCCCCATCTTCACTTGCAAAACAAGTGCAGCCCT...GTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp TTTATCTATAGCTCTTGCCTTCCTTACCCAGAACAAAACAGACGGCGATTACAACTCTTGCCCACAGCTTaGTCCACATTCAGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: FIYSSCLPYPEQNRRRLQLLPTA*STFRGK
Trigger: TTTGCCCCTGAATGTGGACAAAGCTGTGGGCAAGAG...TTGTAATCGCCGTCTGTTTTGTTCTGGGTAAGGAAGGCAAGAGCTATAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp CCTCGGTTTCCCTGTTCGCTTTTGAATGTTTCAGTTTTAGTTATTGATACAATGGGTCCTGCTGACCTCTaGCCCACAGCTTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: PRFPCSLLNVSVLVIDTMGPADL*PTALST
Trigger: TGTGGACAAAGCTGTGGGCAAGAGGTCAGCAGGACC...CATTGTATCAATAACTAAAACTGAAACATTCAAAAGCGAACAGGGAAACCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS-3UTR CAA 90 bp GCCCGGGGCGCAGGGAGAGCTCAGAACCCATTCACATTAAATTATTATTATTTATATAGGATATGCGTATaGCTAATAGTCAGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: ARGAGRAQNPFTLNYYYLYRICV*LIVRLR
Trigger: CCTAAGCCTGACTATTAGCAATACGCATATCCTATA...TAAATAATAATAATTTAATGTGAATGGGTTCTGAGCTCTCCCTGCGCCCCGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 72 bp CGGGGTCGAGGGGCACGCTGGCGGCGGCGGAGCCCATaGCCGTGCGGTACATCTCCACGCCCTCCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RGRGARWRRRSP*PCGTSPRPPAA
Trigger: TGCTGCCGGAGGGCGTGGAGATGTACCGCACGGTCATGGGCTCCGCCGCCGCCAGCGTGCCCCTCGACCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp GGCAGCTGCGGCGCGCCGCCCGCGGCAGGAAGTGCTTaGCGTCCCGGCGCTCCGGCTCCCATGGACTTTCTC +
Preference number: 6 (lower is better)
Translates to: GSCGAPPAAGSA*RPGAPAPMDFL
Trigger: GAGAAAGTCCATGGGAGCCGGAGCGCCGGGACGCCAAGCACTTCCTGCCGCGGGCGGCGCGCCGCAGCTGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277554.4
CDS CAA 72 bp GGGCAGCTGCGGCGCGCCGCCCGCGGCAGGAAGTGCTaGGCGTCCCGGCGCTCCGGCTCCCATGGACTTTCT +
Preference number: 6 (lower is better)
Translates to: GQLRRAARGRKC*ASRRSGSHGLS
Trigger: AGAAAGTCCATGGGAGCCGGAGCGCCGGGACGCCAAGCACTTCCTGCCGCGGGCGGCGCGCCGCAGCTGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277554.4
CDS GCA 72 bp CGATGGTGGCGGCGTCGCCCCGCCGCTCGGCGTAGATaGGTTGCTCGAACACCTGTGCCGCGGCAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RWWRRRPAARRR*VARTPVPRQAG
Trigger: TCCCGCCTGCCGCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CAA 72 bp GGTGGCGGCGTCGCCCCGCCGCTCGGCGTAGATGCGTaGCTCGAACACCTGTGCCGCGGCAGGCGGGAACTC +
Preference number: 6 (lower is better)
Translates to: GGGVAPPLGVDA*LEHLCRGRREL
Trigger: GAGTTCCCGCCTGCCGCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CAA 90 bp AGCCACGATGGTGGCGGCGTCGCCCCGCCGCTCGGCGTAGATGCGTaGCTCGAACACCTGTGCCGCGGCAGGCGGGAACTCGGGGTCGAG +
Preference number: 6 (lower is better)
Translates to: SHDGGGVAPPLGVDA*LEHLCRGRRELGVE
Trigger: CTCGACCCCGAGTTCCCGCCTGCCGCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS GCA 72 bp CCGCCGCTCGGCGTAGATGCGTTGCTCGAACACCTGTaGCGCGGCAGGCGGGAACTCGGGGTCGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: PPLGVDALLEHL*RGRRELGVEGH
Trigger: GTGCCCCTCGACCCCGAGTTCCCGCCTGCCGCGGCACAGGTGTTCGAGCAACGCATCTACGCCGAGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp GGCTGTCGGTGGTGGGCAGGCTGCTGGCGCCTGGACTaGTCCGCTCCCCCTGGGGGTAGGGCATCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: GCRWWAGCWRLD*SAPPGGRASAG
Trigger: TCCAGCAGATGCCCTACCCCCAGGGGGAGCGGACCAGTCCAGGCGCCAGCAGCCTGCCCACCACCGACAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp CCCCGTCCACCTCCTCGCCGGCGTCGAAGGCGGGGTTaGCGGCGGCACTCAGGTCAACATTCACGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: PRPPPRRRRRRG*RRHSGQHSRRQ
Trigger: CTGACGCCGTGAATGTTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGCCGGCGAGGAGGTGGACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CAA 72 bp GCCCCGTCCACCTCCTCGCCGGCGTCGAAGGCGGGGTaGGCGGCGGCACTCAGGTCAACATTCACGGCGTCA +
Preference number: 6 (lower is better)
Translates to: APSTSSPASKAG*AAALRSTFTAS
Trigger: TGACGCCGTGAATGTTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGCCGGCGAGGAGGTGGACGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS GCA 72 bp AGGCCTGGGCCGGCCGGCGGCAGCTCCATGGCTTCATaGTTTACTCGGGTCAGCAGCGGGATGGGCACCGAG +
Preference number: 6 (lower is better)
Translates to: RPGPAGGSSMAS*FTRVSSGMGTE
Trigger: CTCGGTGCCCATCCCGCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCTGCCGCCGGCCGGCCCAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CAA 90 bp ACCGAGCCAGCCCCGTCCACCTCCTCGCCGGCGTCGAAGGCGGGGTaGGCGGCGGCACTCAGGTCAACATTCACGGCGTCAGTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: TEPAPSTSSPASKAG*AAALRSTFTASVLR
Trigger: TCTGAGAACTGACGCCGTGAATGTTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGCCGGCGAGGAGGTGGACGGGGCTGGCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 72 bp TGCGGTACATCTCCACGCCCTCCGGCAGCATGGACTTaGTCTTGGGCAGCCAGCGCTTGCGAACGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: CGTSPRPPAAWT*SWAASACERGG
Trigger: CCCGCCGCGTTCGCAAGCGCTGGCTGCCCAAGATCAAGTCCATGCTGCCGGAGGGCGTGGAGATGTACCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp GGTCAACATTCACGGCGTCAGTTCTCAGAGCCACGATaGTGGCGGCGTCGCCCCGCCGCTCGGCGTAGATGC +
Preference number: 6 (lower is better)
Translates to: GQHSRRQFSEPR*WRRRPAARRRC
Trigger: GCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGAGAACTGACGCCGTGAATGTTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CAA 72 bp GTGCGGTACATCTCCACGCCCTCCGGCAGCATGGACTaGATCTTGGGCAGCCAGCGCTTGCGAACGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VRYISTPSGSMD*ILGSQRLRTRR
Trigger: CCGCCGCGTTCGCAAGCGCTGGCTGCCCAAGATCAAGTCCATGCTGCCGGAGGGCGTGGAGATGTACCGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp GCGGATGAGGACGCAGGAGCGGCTCTCCAGCGGCACTaGCTCAGGCTTCTCTTGCACTGCATAGCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: ADEDAGAALQRH*LRLLLHCIAAG
Trigger: TCCGGCAGCTATGCAGTGCAAGAGAAGCCTGAGCCAGTGCCGCTGGAGAGCCGCTCCTGCGTCCTCATCCGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp CAACATTCACGGCGTCAGTTCTCAGAGCCACGATGGTaGCGGCGTCGCCCCGCCGCTCGGCGTAGATGCGTT +
Preference number: 6 (lower is better)
Translates to: QHSRRQFSEPRW*RRRPAARRRCV
Trigger: AACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGAGAACTGACGCCGTGAATGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CCA 72 bp CTTGTTCATGGCAGAGACAGGACGGCTCATCCCTCGTaGCCCCCGGAAGGGCCATTCAGAGGCCCCGTGAGT +
Preference number: 6 (lower is better)
Translates to: LVHGRDRTAHPS*PPEGPFRGPVS
Trigger: ACTCACGGGGCCTCTGAATGGCCCTTCCGGGGGCCACGAGGGATGAGCCGTCCTGTCTCTGCCATGAACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467669.1
CDS CAA 90 bp TCCTCGATCACAGCGGTCTGCGAGTCGCAGTGGGGCGAGCTCACCTaGAACATGAGGTCGGTGCCGCGCTCCACGATGTGCTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SSITAVCESQWGELT*NMRSVPRSTMCWIC
Trigger: GCAGATCCAGCACATCGTGGAGCGCGGCACCGACCTCATGTTCAAGGTGAGCTCGCCCCACTGCGACTCGCAGACCGCTGTGATCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 72 bp CTGCACACAGGTGGCAGTTCATCAGCTGGCCGCGTGTaGTGTAGACCCCAGAGCCTGCCACCAGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LHTGGSSSAGRV*CRPQSLPPAPA
Trigger: AGCTGGAGCTGGTGGCAGGCTCTGGGGTCTACATCACACGCGGCCAGCTGATGAACTGCCACCTGTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS CAA 90 bp GGTCCAGGCTACAACTGGGCTTTAACGGAGAACCCGCAGAGAGACTaGTTCATGGCAGAGACAGGACGGCTCATCCCTCGTGGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: GPGYNWALTENPQRD*FMAETGRLIPRGPR
Trigger: CCGGGGGCCACGAGGGATGAGCCGTCCTGTCTCTGCCATGAACAAGTCTCTCTGCGGGTTCTCCGTTAAAGCCCAGTTGTAGCCTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467669.1
CDS CCA 72 bp GCTCGTTCAGGCAGCCCAGCACTGTGTTCCCGAAGTTaGGGATCTCGATGTGCAGCATCTGAGACATGGCGG +
Preference number: 6 (lower is better)
Translates to: ARSGSPALCSRS*GSRCAASETWR
Trigger: CCGCCATGTCTCAGATGCTGCACATCGAGATCCCCAACTTCGGGAACACAGTGCTGGGCTGCCTGAACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 72 bp CAGGCTTCTCTTGCACTGCATAGCTGCCGGAGGCCTTaGTGTACATCTGGCCGTACTGCTCCTCCACCATGG +
Preference number: 6 (lower is better)
Translates to: QASLALHSCRRP*CTSGRTAPPPW
Trigger: CCATGGTGGAGGAGCAGTACGGCCAGATGTACATCAAGGCCTCCGGCAGCTATGCAGTGCAAGAGAAGCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277554.4
ENST00000371753.5
CDS TCA 72 bp CACTGGCTCAGGCTTCTCTTGCACCTCTGCAGGAGCTaGGCTTCAAGGTCCAGGCTACAACTGGGCTTTAAC +
Preference number: 6 (lower is better)
Translates to: HWLRLLLHLCRS*ASRSRLQLGFN
Trigger: GTTAAAGCCCAGTTGTAGCCTGGACCTTGAAGCTCAGCTCCTGCAGAGGTGCAAGAGAAGCCTGAGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467669.1
CDS CCA 72 bp TCTGCAGGAGCTGAGCTTCAAGGTCCAGGCTACAACTaGGCTTTAACGGAGAACCCGCAGAGAGACTTGTTC +
Preference number: 6 (lower is better)
Translates to: SAGAELQGPGYN*ALTENPQRDLF
Trigger: GAACAAGTCTCTCTGCGGGTTCTCCGTTAAAGCCCAGTTGTAGCCTGGACCTTGAAGCTCAGCTCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467669.1
CDS CAA 72 bp TACAACTGGGCTTTAACGGAGAACCCGCAGAGAGACTaGTTCATGGCAGAGACAGGACGGCTCATCCCTCGT +
Preference number: 6 (lower is better)
Translates to: YNWALTENPQRD*FMAETGRLIPR
Trigger: ACGAGGGATGAGCCGTCCTGTCTCTGCCATGAACAAGTCTCTCTGCGGGTTCTCCGTTAAAGCCCAGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467669.1