Pregenerated sensors for NACA (Homo sapiens)
Ensembl gene IDs: ENSG00000196531Ensembl transcript IDs: ENST00000356769.7, ENST00000393891.8, ENST00000454682.6, ENST00000546392.6, ENST00000546862.6, ENST00000548084.1, ENST00000548386.6, ENST00000549855.5, ENST00000550343.1, ENST00000550952.6, ENST00000551520.1, ENST00000551793.5, ENST00000552540.5, ENST00000676873.1, ENST00000678047.1, ENST00000678066.1, ENST00000678416.1, ENST00000679092.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTGGCACTAAACCTTATCAAATGAGGGAGGCCTTAGGAGTAATTAATAAATTAAGACCAGTCACCGACTaGATTCATCCAACAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: CGTKPYQMREALGVINKLRPVTD*IHPTRS Trigger: GCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCT...TAATTTATTAATTACTCCTAAGGCCTCCCTCATTTGATAAGGTTTAGTGCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678066.1 |
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| CDS-3UTR CCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATGCAGGCTCGGATTCTaGGCCCGCCCCGCAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPCRLGF*ARPAAL Trigger: AAGGGCTGCGGGGCGGGCCCAGAATCCGAGCCTGCA...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCAAACTGCTCCCATCTCTaGAGGCTCGGATTCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPNCSHL*RLGFWA Trigger: GGCCCAGAATCCGAGCCTGCAGAGATGGGAGCAGTT...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR CCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATTGACGAGGACCGACTaGAAAGGCACTCCCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPLTRTD*KGTPPE Trigger: CTCTGGGGGAGTGCCTTTCCAGTCGGTCCTCGTCAA...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS-3UTR TCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCAAAGGGGTTTAGAGGGTaGTTCCAACACCAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPKGFRG*FQHQPR Trigger: CCTGGGCTGGTGTTGGAATCACCCTCTAAACCCCTT...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS-3UTR GCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCAGCAGCCCTTCTACCCTaGTTTTGCCAGGACACCAAC | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPAALLP*FCQDTN Trigger: GTTGGTGTCCTGGCAAAAGCAGGGTAGAAGGGCTGC...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATTCCGCCCTCAACACTaGAACTGCTCCCATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPFRPQH*NCSHLC Trigger: GCAGAGATGGGAGCAGTTGCAGTGTTGAGGGCGGAA...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR CCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCACGAGTAGGAACCCTGTaGCCCAGTAAAGCCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPRVGTL*PSKASN Trigger: GTTGGAGGCTTTACTGGGCCACAGGGTTCCTACTCG...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCACTTCTACCCTGCTTTTaGCAGGACACCAACCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPLLPCF*QDTNRR Trigger: TCTGCGGTTGGTGTCCTGGCAAAAGCAGGGTAGAAG...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR CCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCACGAAAGAAAGGCGGATaGCTGCGGATAGACAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPRKKGG*LRIDSS Trigger: GCTACTGTCTATCCGCAGCCATCCGCCTTTCTTTCG...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR TCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCAAGACCAGTCACCGACTaGATTCATCCAACAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPRPVTD*IHPTRS Trigger: GCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCT...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000546862.6 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 ENST00000679092.1 |
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| CDS-3UTR CCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTCTTGGCAGAGGGGGTTaGGACAGGGATTCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITLGRGG*DRDSSR Trigger: TCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAG...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS-3UTR TCA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCACTTTTCTGGATCCTGTaGAGCAGTTCCCAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: GGGGEETSHRLNSSNKKPLFWIL*SSSQNK Trigger: CTTGTTTTGGGAACTGCTTCACAGGATCCAGAAAAG...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTGCAGCCCTTCTACCCTaGTTTTGCCAGGACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITAALLP*FCQDTN Trigger: GTTGGTGTCCTGGCAAAAGCAGGGTAGAAGGGCTGC...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTTTCCGCCCTCAACACTaGAACTGCTCCCATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITFRPQH*NCSHLC Trigger: GCAGAGATGGGAGCAGTTGCAGTGTTGAGGGCGGAA...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR CCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTCGAGTAGGAACCCTGTaGCCCAGTAAAGCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITRVGTL*PSKASN Trigger: GTTGGAGGCTTTACTGGGCCACAGGGTTCCTACTCG...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTCTTCTACCCTGCTTTTaGCAGGACACCAACCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITLLPCF*QDTNRR Trigger: TCTGCGGTTGGTGTCCTGGCAAAAGCAGGGTAGAAG...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR GCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTTTCTTCGTAACAGGTTaGTTGGCAGAGGGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITFFVTG*LAEGVG Trigger: CCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAA...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS-3UTR CCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTCGAAAGAAAGGCGGATaGCTGCGGATAGACAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITRKKGG*LRIDSS Trigger: GCTACTGTCTATCCGCAGCCATCCGCCTTTCTTTCG...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR TCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTTTCCAGACCCTAAGATaGGAAACAACTGTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITFQTLR*ETTVSA Trigger: GGCTGAGACAGTTGTTTCTCATCTTAGGGTCTGGAA...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546862.6 |
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| CDS-3UTR TCA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTAGACCAGTCACCGACTaGATTCATCCAACAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGRDQSPTEFIQQEAITRPVTD*IHPTRS Trigger: GCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCT...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000546862.6 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 ENST00000679092.1 |
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| CDS-3UTR TCA 90 bp | TGTGGCACTAAACCTTATCAAATGAGGGAGGCCTTAGGAGTAATTAATAAATTATTCGCCGGGCATTTCTaGAGGAAGGGAATAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: CGTKPYQMREALGVINKLFAGHF*RKGIKR Trigger: CCTTTTTATTCCCTTCCTTCAGAAATGCCCGGCGAA...TAATTTATTAATTACTCCTAAGGCCTCCCTCATTTGATAAGGTTTAGTGCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678066.1 |
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| CDS-3UTR TCA 90 bp | TGTGGCACTAAACCTTATCAAATGAGGGAGGCCTTAGGAGTAATTAATAAATTAAAAGGAGGCCTAAATTaGTTGGGATACATTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: CGTKPYQMREALGVINKLKGGLN*LGYIHL Trigger: AAGGTGAATGTATCCCAATCAATTTAGGCCTCCTTT...TAATTTATTAATTACTCCTAAGGCCTCCCTCATTTGATAAGGTTTAGTGCCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678066.1 |
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| CDS GCA 90 bp | TGGAGCGGAGGGGGTGGGACTAGGATCCGATTCCGGGTCAAGAGCTaGCGGCAGCCACTTCCTTTGACGAGTGACTGTCAGGCCGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: WSGGGGTRIRFRVKS*RQPLPLTSDCQAVP Trigger: GGGAACGGCCTGACAGTCACTCGTCAAAGGAAGTGGCTGCCGGCAGCTCTTGACCCGGAATCGGATCCTAGTCCCACCCCCTCCGCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356769.7 ENST00000546392.6 ENST00000549855.5 |
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| CDS GCA 90 bp | TTCCCAAAACAAGACGCACTCCTCTTCCGCCCTCAACACTGCAACTaGTCCCATCTCTGCAGGCTCGGATTCTGGGCCCGCCCCGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: FPKQDALLFRPQHCN*SHLCRLGFWARPAA Trigger: GGCTGCGGGGCGGGCCCAGAATCCGAGCCTGCAGAGATGGGAGCAGTTGCAGTGTTGAGGGCGGAAGAGGAGTGCGTCTTGTTTTGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000393891.8 ENST00000548084.1 ENST00000552540.5 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCAACCGCAGACCCCATTTaGTCCGGAGGCCCAGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GGGGEETSHRLNSSNKKPTADPI*SGGPGA Trigger: CGCCCCTGGGCCTCCGGACAAAATGGGGTCTGCGGT...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS GCA 90 bp | AAGCAGTTCCCAAAACAAGACGCACTCCTCTTCCGCCCTCAACACTaGAACTGCTCCCATCTCTGCAGGCTCGGATTCTGGGCCCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: KQFPKQDALLFRPQH*NCSHLCRLGFWARP Trigger: GGGGCGGGCCCAGAATCCGAGCCTGCAGAGATGGGAGCAGTTGCAGTGTTGAGGGCGGAAGAGGAGTGCGTCTTGTTTTGGGAACTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000393891.8 ENST00000548084.1 ENST00000552540.5 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS CCA 90 bp | GGGCATGTTGACGAGGACCGACTGGAAAGGCACTCCCCCAGAGATTaGTTCCGGGGGAATCAGAGGCAGCAGCTCATCCTCATCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GHVDEDRLERHSPRD*FRGNQRQQLILISR Trigger: CCTGCTGATGAGGATGAGCTGCTGCCTCTGATTCCCCCGGAACCAATCTCTGGGGGAGTGCCTTTCCAGTCGGTCCTCGTCAACATGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000454682.6 ENST00000548386.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCAGCACTCCCCCAGAGATaGGTTCCGGGGGAATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GGGGEETSHRLNSSNKKPALPQR*VPGESE Trigger: CTCTGATTCCCCCGGAACCAATCTCTGGGGGAGTGC...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS CCA 90 bp | AGGGAGCTGAAGAGGAAGGGGTCCCTTTCAGAGTTGGAGCTATCATaGGAGAGGCTAGAGCTAAGGCAGCTGGGGAGATGGGAGGCCCTA | + |
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Preference number: 5 (lower is better) Translates to: RELKRKGSLSELELS*ERLELRQLGRWEAL Trigger: TAGGGCCTCCCATCTCCCCAGCTGCCTTAGCTCTAGCCTCTCCCATGATAGCTCCAACTCTGAAAGGGACCCCTTCCTCTTCAGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS-3UTR CAA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTACCGCAGACCCCATTTaGTCCGGAGGCCCAGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: WRGRDQSPTEFIQQEAITTADPI*SGGPGA Trigger: CGCCCCTGGGCCTCCGGACAAAATGGGGTCTGCGGT...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS CCA 90 bp | TTGGAGCTATCATGGGAGAGGCTAGAGCTAAGGCAGCTGGGGAGATaGGAGGCCCTATTAGGTTTGGTAGGAAGGTTGGGGCTTCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LELSWERLELRQLGR*EALLGLVGRLGLQG Trigger: CCCCTGAAGCCCCAACCTTCCTACCAAACCTAATAGGGCCTCCCATCTCCCCAGCTGCCTTAGCTCTAGCCTCTCCCATGATAGCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATTAGGGGTGGGCATGTaGACGAGGACCGACTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GGGGEETSHRLNSSNKKPLGVGM*TRTDWK Trigger: TTTCCAGTCGGTCCTCGTCAACATGCCCACCCCTAA...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS CCA 90 bp | TTAACTCTCAGTCCCCGGGGCGGCTTAGCCCGAAAGAAAGGCGGATaGCTGCGGATAGACAGTAGCGGCACAGAAAGTACTTACTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LTLSPRGGLARKKGG*LRIDSSGTESTYCA Trigger: TGCACAGTAAGTACTTTCTGTGCCGCTACTGTCTATCCGCAGCCATCCGCCTTTCTTTCGGGCTAAGCCGCCCCGGGGACTGAGAGTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000548084.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS-3UTR CAA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTGCTTGGCAGAGGGGGTaGGGACAGGGATTCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: WRGRDQSPTEFIQQEAITAWQRG*GQGFQQ Trigger: CTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGC...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS CCA 90 bp | GGCCATGGGAGTCACACAGTGGTAAGGAACAGTACTGACTATACATaGAGGGCTGGGGGTGCCTTTTGGATTAGGGACTACCTCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GHGSHTVVRNSTDYT*RAGGAFWIRDYLRG Trigger: CCCTCTGAGGTAGTCCCTAATCCAAAAGGCACCCCCAGCCCTCCATGTATAGTCAGTACTGTTCCTTACCACTGTGTGACTCCCATGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 90 bp | CACCCCGGCAGGGTCAGCACTTTCCAAAGGAAATGCAGCCACTGTTaGGGTAATGAGAGAACTTTTGAGAAGCGGACCAGCAGAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: HPGRVSTFQRKCSHC*GNERTFEKRTSRVW Trigger: CCAGACTCTGCTGGTCCGCTTCTCAAAAGTTCTCTCATTACCCCAACAGTGGCTGCATTTCCTTTGGAAAGTGCTGACCCTGCCGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS TCA 90 bp | TCTGGCAGAGGAGGAGAGACTGGTATCCTCAGAGTGGTTGCTACTTaGGTAGAAGGCTCTTTGGGAGCCACAGGTGCCATAACCAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SGRGGETGILRVVAT*VEGSLGATGAITKA Trigger: TGCCTTGGTTATGGCACCTGTGGCTCCCAAAGAGCCTTCTACTCAAGTAGCAACCACTCTGAGGATACCAGTCTCTCCTCCTCTGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 90 bp | GCTGCAGGTTATGCTAGAGATGGTAGAGGGACCTTTGTCAACAGATaGAGCCACCACTGGAAAGGCAGCCACAGTAGCAGGAACTACCTC | + |
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Preference number: 5 (lower is better) Translates to: AAGYARDGRGTFVNR*SHHWKGSHSSRNYL Trigger: GAGGTAGTTCCTGCTACTGTGGCTGCCTTTCCAGTGGTGGCTCCATCTGTTGACAAAGGTCCCTCTACCATCTCTAGCATAACCTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 90 bp | ACCTTTCCGAGTGGGAGCTGTGATGATTGGCGTGCTTTCTGGAGCTaGGGCAACAAGTACTTCTTTCAGAGCTGTGGGGCCTTTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: TFPSGSCDDWRAFWS*GNKYFFQSCGAFLC Trigger: GCAAAGAAAGGCCCCACAGCTCTGAAAGAAGTACTTGTTGCCCCAGCTCCAGAAAGCACGCCAATCATCACAGCTCCCACTCGGAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATCTGTTCCAGACCCCTaGTTGTTCTTCGTAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: GGGGEETSHRLNSSNKKPSVPDP*LFFVTG Trigger: ACCTGTTACGAAGAACAACAAGGGGTCTGGAACAGA...TGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS GCA 90 bp | CTGTCAGATTCTGTTCCAGACCCCTTGTTGTTCTTCGTAACAGGTTaGTTGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGATTTAGGG | + |
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Preference number: 5 (lower is better) Translates to: LSDSVPDPLLFFVTG*LAEGVGTGIPADLG Trigger: CCCTAAATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAACAGAATCTGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000454682.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS GCA 90 bp | GCAATCTCGGCTCAATGTAATGTCCGTCTCCCAGGTTCAAGCAATTaGCGTGCCTCAGCCACCTTAGTAGCTGGGATTACAGGAGCGTTA | + |
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Preference number: 5 (lower is better) Translates to: AISAQCNVRLPGSSN*RASATLVAGITGAL Trigger: TAACGCTCCTGTAATCCCAGCTACTAAGGTGGCTGAGGCACGGCAATTGCTTGAACCTGGGAGACGGACATTACATTGAGCCGAGATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551793.5 |
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| CDS GCA 90 bp | CACGGCAAACCAAGGCAAATACCCTTGTTGTTCTTCGTAACAGGTTaGTTGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGATTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGKPRQIPLLFFVTG*LAEGVGTGIPADLG Trigger: CCCTAAATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGGTTTGCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CCA 90 bp | GCTAGAGATGGTAGAGGGACCTTTGTCAACAGATGGAGCCACCACTaGAAAGGCAGCCACAGTAGCAGGAACTACCTCATTTCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARDGRGTFVNRWSHH*KGSHSSRNYLISGR Trigger: CCTTCCAGAAATGAGGTAGTTCCTGCTACTGTGGCTGCCTTTCCAGTGGTGGCTCCATCTGTTGACAAAGGTCCCTCTACCATCTCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS-3UTR CAA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTTTCGTAACAGGTTGCTaGGCAGAGGGGGTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WRGRDQSPTEFIQQEAITFVTGC*AEGVGT Trigger: TGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAA...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS-3UTR CAA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTGTTCTTCGTAACAGGTaGCTTGGCAGAGGGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WRGRDQSPTEFIQQEAITVLRNR*LGRGGW Trigger: CCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAAC...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS CCA 90 bp | ACTAACGGTAATACAGTAGGGTCTTTCTTGGTGGTGAGTCCTGCTTaGGCTGGAGAGAAAGGGGCTCCTTCAAGAGAGGCAGGTACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TNGNTVGSFLVVSPA*AGEKGAPSREAGTV Trigger: AACTGTACCTGCCTCTCTTGAAGGAGCCCCTTTCTCTCCAGCCCAAGCAGGACTCACCACCAAGAAAGACCCTACTGTATTACCGTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 90 bp | ACTCTTTTTGGTCTGTGGACCTTTCCGAGTGGGAGCTGTGATGATTaGCGTGCTTTCTGGAGCTGGGGCAACAAGTACTTCTTTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLFGLWTFPSGSCDD*RAFWSWGNKYFFQS Trigger: GCTCTGAAAGAAGTACTTGTTGCCCCAGCTCCAGAAAGCACGCCAATCATCACAGCTCCCACTCGGAAAGGTCCACAGACCAAAAAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS GCA 90 bp | TGGAGGAGAAACACAAGTAGCTACCTCAAAGGTAGTAGTAGGTGCTaGAGCAATTGTACAGGGGTTAGTCACCACAAGTGGGGTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WRRNTSSYLKGSSRC*SNCTGVSHHKWGGS Trigger: GGAACCACCCCACTTGTGGTGACTAACCCCTGTACAATTGCTGCAGCACCTACTACTACCTTTGAGGTAGCTACTTGTGTTTCTCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS-3UTR CAA 90 bp | TGGCGGGGAAGAGACCAGTCACCGACTGAATTCATCCAACAAGAAGCCATAACTGTTCCAGACCCCTTGTaGTTCTTCGTAACAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WRGRDQSPTEFIQQEAITVPDPL*FFVTGC Trigger: GCAACCTGTTACGAAGAACAACAAGGGGTCTGGAAC...AGTTATGGCTTCTTGTTGGATGAATTCAGTCGGTGACTGGTCTCTTCCCCGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678047.1 |
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| CDS GCA 90 bp | CATTGGAGGAGAAACACAAGTAGCTACCTCAAAGGTAGTAGTAGGTaGTGCAGCAATTGTACAGGGGTTAGTCACCACAAGTGGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HWRRNTSSYLKGSSR*CSNCTGVSHHKWGG Trigger: ACCACCCCACTTGTGGTGACTAACCCCTGTACAATTGCTGCAGCACCTACTACTACCTTTGAGGTAGCTACTTGTGTTTCTCCTCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 90 bp | CAGAGTGGTTGCTACTTGAGTAGAAGGCTCTTTGGGAGCCACAGGTaGCATAACCAAGGCAGCAGGGGAAGTTGGTTCTATGTTACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QSGCYLSRRLFGSHR*HNQGSRGSWFYVTY Trigger: ATAAGTAACATAGAACCAACTTCCCCTGCTGCCTTGGTTATGGCACCTGTGGCTCCCAAAGAGCCTTCTACTCAAGTAGCAACCACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 90 bp | GGTAATGAGAGAACTTTTGAGAAGCGGACCAGCAGAGTCTGGGCCTaGATAAGAATCTGTCTTGATTACAGAGGCCGAGGAGTTAACACC | + |
|
Preference number: 5 (lower is better) Translates to: GNERTFEKRTSRVWA*IRICLDYRGRGVNT Trigger: GGTGTTAACTCCTCGGCCTCTGTAATCAAGACAGATTCTTATGCAGGCCCAGACTCTGCTGGTCCGCTTCTCAAAAGTTCTCTCATTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 90 bp | TGTTGGGGTAATGAGAGAACTTTTGAGAAGCGGACCAGCAGAGTCTaGGCCTGCATAAGAATCTGTCTTGATTACAGAGGCCGAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CWGNERTFEKRTSRV*ACIRICLDYRGRGV Trigger: AACTCCTCGGCCTCTGTAATCAAGACAGATTCTTATGCAGGCCCAGACTCTGCTGGTCCGCTTCTCAAAAGTTCTCTCATTACCCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 90 bp | GTAAGGAACAGTACTGACTATACATGGAGGGCTGGGGGTGCCTTTTaGATTAGGGACTACCTCAGAGGGAACTTTATTAAGATTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRNSTDYTWRAGGAF*IRDYLRGNFIKISL Trigger: AAGACTAATCTTAATAAAGTTCCCTCTGAGGTAGTCCCTAATCCAAAAGGCACCCCCAGCCCTCCATGTATAGTCAGTACTGTTCCTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 90 bp | ATGAAGGTTCACAGTTCCAAATACAAAAGTTGCCCTGATCAACCCTaGTTCTTTGACCCAATACCAGTTAGTAAGAGAATACCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MKVHSSKYKSCPDQP*FFDPIPVSKRIPTW Trigger: CCAGGTGGGTATTCTCTTACTAACTGGTATTGGGTCAAAGAAGCAGGGTTGATCAGGGCAACTTTTGTATTTGGAACTGTGAACCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551520.1 |
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| CDS CCA 90 bp | GTAGGAACCAAGGGTAAAGTAGTAAGAGTACCTTCCTTAACTGGGTaGTTTTTAGGAGCTAAAGAGACAGTTCCTTCTAGAAAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGTKGKVVRVPSLTG*FLGAKETVPSRKGL Trigger: CAGCCCTTTTCTAGAAGGAACTGTCTCTTTAGCTCCTAAAAACCACCCAGTTAAGGAAGGTACTCTTACTACTTTACCCTTGGTTCCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS GCA 90 bp | TTCAACGGGATTCTACCACTACTAAGAATTGGGTTCAGTGTATACTaGTTGGGTGACAGGTGCACCAAAATCTCAAAAATCACCACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FNGILPLLRIGFSVY*LGDRCTKISKITTR Trigger: TCTAGTGGTGATTTTTGAGATTTTGGTGCACCTGTCACCCAAGCAGTATACACTGAACCCAATTCTTAGTAGTGGTAGAATCCCGTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551793.5 |
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| CDS GCA 90 bp | CCACTACTAAGAATTGGGTTCAGTGTATACTGCTTGGGTGACAGGTaGACCAAAATCTCAAAAATCACCACTAGAGAACTTACTTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: PLLRIGFSVYCLGDR*TKISKITTRELTCI Trigger: TATACAAGTAAGTTCTCTAGTGGTGATTTTTGAGATTTTGGTGCACCTGTCACCCAAGCAGTATACACTGAACCCAATTCTTAGTAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551793.5 |
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| CDS GCA 90 bp | CTGTCAGATTCTGTTCCAGACCCTAAGATGAGAAACAACTTTTACTaGTTTATAGTAGAAATTATAAGAGAAGGTACTTCACCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSDSVPDPKMRNNFY*FIVEIIREGTSPQP Trigger: AGGCTGTGGTGAAGTACCTTCTCTTATAATTTCTACTATAAAGCAGTAAAAGTTGTTTCTCATCTTAGGGTCTGGAACAGAATCTGACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000548386.6 ENST00000550343.1 ENST00000676873.1 |
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| CDS-3UTR CAA 90 bp | TGTGGCACTAAACCTTATCAAATGAGGGAGGCCTTAGGAGTAATTAATAAATTAAAAAGGAGGCCTAAATaGATTGGGATACATTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: CGTKPYQMREALGVINKLKRRPK*IGIHSP Trigger: AGGTGAATGTATCCCAATCAATTTAGGCCTCCTTTT...TAATTTATTAATTACTCCTAAGGCCTCCCTCATTTGATAAGGTTTAGTGCCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678066.1 |
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| CDS CCA 90 bp | TTAATATACTGTAACTGCTTTCTTTCCCTCAAGGTCTTTGTTTCTTaGCACAGGCAAATAATGACCCATATGACTCTAAAATTTTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIYCNCFLSLKVFVS*HRQIMTHMTLKFYP Trigger: TGGGTAAAATTTTAGAGTCATATGGGTCATTATTTGCCTGTGCCAAGAAACAAAGACCTTGAGGGAAAGAAAGCAGTTACAGTATATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000548386.6 ENST00000676873.1 |
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| CDS TCA 72 bp | GATTCCGGGTCAAGAGCTGCCGGCAGCCACTTCCTTTaGCGAGTGACTGTCAGGCCGTTCCCACGGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DSGSRAAGSHFL*RVTVRPFPRRG Trigger: CCCCCGCCGTGGGAACGGCCTGACAGTCACTCGTCAAAGGAAGTGGCTGCCGGCAGCTCTTGACCCGGAATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356769.7 ENST00000546392.6 ENST00000549855.5 |
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| CDS CAA 72 bp | CGATTCCGGGTCAAGAGCTGCCGGCAGCCACTTCCTTaGACGAGTGACTGTCAGGCCGTTCCCACGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RFRVKSCRQPLP*TSDCQAVPTAG Trigger: CCCCGCCGTGGGAACGGCCTGACAGTCACTCGTCAAAGGAAGTGGCTGCCGGCAGCTCTTGACCCGGAATCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356769.7 ENST00000546392.6 ENST00000549855.5 |
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| CDS GCA 72 bp | CCCAGGCTGGGGTGCAAAGGCACGATCTCGGCTCACTaGAACCTCCCCTTCCCGGGTCAAGCGATTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRLGCKGTISAH*NLPFPGQAILL Trigger: CAGGAGAATCGCTTGACCCGGGAAGGGGAGGTTGCAGTGAGCCGAGATCGTGCCTTTGCACCCCAGCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356769.7 |
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| CDS CCA 72 bp | CACTGCAACTGCTCCCATCTCTGCAGGCTCGGATTCTaGGCCCGCCCCGCAGCCCTTCTACCCTGCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: HCNCSHLCRLGF*ARPAALLPCFC Trigger: GCAAAAGCAGGGTAGAAGGGCTGCGGGGCGGGCCCAGAATCCGAGCCTGCAGAGATGGGAGCAGTTGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000393891.8 ENST00000548084.1 ENST00000552540.5 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS CAA 90 bp | ACTAGGATCCGATTCCGGGTCAAGAGCTGCCGGCAGCCACTTCCTTaGACGAGTGACTGTCAGGCCGTTCCCACGGCGGGGGTGGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: TRIRFRVKSCRQPLP*TSDCQAVPTAGVVT Trigger: TGTCACCACCCCCGCCGTGGGAACGGCCTGACAGTCACTCGTCAAAGGAAGTGGCTGCCGGCAGCTCTTGACCCGGAATCGGATCCTAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356769.7 ENST00000546392.6 ENST00000549855.5 |
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| CDS GCA 72 bp | CAAGACGCACTCCTCTTCCGCCCTCAACACTGCAACTaGTCCCATCTCTGCAGGCTCGGATTCTGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QDALLFRPQHCN*SHLCRLGFWAR Trigger: GCGGGCCCAGAATCCGAGCCTGCAGAGATGGGAGCAGTTGCAGTGTTGAGGGCGGAAGAGGAGTGCGTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000393891.8 ENST00000548084.1 ENST00000552540.5 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS GCA 72 bp | GGGGGTGGGACTAGGATCCGATTCCGGGTCAAGAGCTaGCGGCAGCCACTTCCTTTGACGAGTGACTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGGTRIRFRVKS*RQPLPLTSDCQ Trigger: CTGACAGTCACTCGTCAAAGGAAGTGGCTGCCGGCAGCTCTTGACCCGGAATCGGATCCTAGTCCCACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000356769.7 ENST00000546392.6 ENST00000549855.5 |
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| CDS CCA 72 bp | AGTCCCCGGGGCGGCTTAGCCCGAAAGAAAGGCGGATaGCTGCGGATAGACAGTAGCGGCACAGAAAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SPRGGLARKKGG*LRIDSSGTEST Trigger: AGTACTTTCTGTGCCGCTACTGTCTATCCGCAGCCATCCGCCTTTCTTTCGGGCTAAGCCGCCCCGGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000393891.8 ENST00000548084.1 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS CAA 72 bp | GGGACAGGGATTCCAGCAGATTTAGGGGTGGGCATGTaGACGAGGACCGACTGGAAAGGCACTCCCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTGIPADLGVGM*TRTDWKGTPPE Trigger: CTCTGGGGGAGTGCCTTTCCAGTCGGTCCTCGTCAACATGCCCACCCCTAAATCTGCTGGAATCCCTGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000454682.6 ENST00000548386.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS CAA 90 bp | CCCAAGCAGATTCACTGGAGAAAGCGGCGCATCACAGGGTTAGTATaGGTGGGTAGCGCCCAAGAGGGGTGTGGACGACAGACACACCAT | + |
|
Preference number: 6 (lower is better) Translates to: PKQIHWRKRRITGLV*VGSAQEGCGRQTHH Trigger: ATGGTGTGTCTGTCGTCCACACCCCTCTTGGGCGCTACCCACCAATACTAACCCTGTGATGCGCCGCTTTCTCCAGTGAATCTGCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS TCA 72 bp | CGAGTGACTGTCAGGCCGTTCCCACGGCGGGGGTGGTaGCAAGGACTAAAGGGTAAGAATTTAGAACGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RVTVRPFPRRGW*QGLKGKNLERD Trigger: GTCCCGTTCTAAATTCTTACCCTTTAGTCCTTGTCACCACCCCCGCCGTGGGAACGGCCTGACAGTCACTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356769.7 ENST00000546392.6 |
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| CDS GCA 72 bp | CCAAAACAAGACGCACTCCTCTTCCGCCCTCAACACTaGAACTGCTCCCATCTCTGCAGGCTCGGATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKQDALLFRPQH*NCSHLCRLGFW Trigger: CCAGAATCCGAGCCTGCAGAGATGGGAGCAGTTGCAGTGTTGAGGGCGGAAGAGGAGTGCGTCTTGTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000393891.8 ENST00000548084.1 ENST00000552540.5 ENST00000678047.1 ENST00000678066.1 ENST00000678416.1 |
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| CDS CAA 72 bp | ATTCACTGGAGAAAGCGGCGCATCACAGGGTTAGTATaGGTGGGTAGCGCCCAAGAGGGGTGTGGACGACAG | + |
|
Preference number: 6 (lower is better) Translates to: IHWRKRRITGLV*VGSAQEGCGRQ Trigger: CTGTCGTCCACACCCCTCTTGGGCGCTACCCACCAATACTAACCCTGTGATGCGCCGCTTTCTCCAGTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CAA 90 bp | CAACCAGAGCTAAGGGAGCTGAAGAGGAAGGGGTCCCTTTCAGAGTaGGAGCTATCATGGGAGAGGCTAGAGCTAAGGCAGCTGGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPELRELKRKGSLSE*ELSWERLELRQLGR Trigger: TCTCCCCAGCTGCCTTAGCTCTAGCCTCTCCCATGATAGCTCCAACTCTGAAAGGGACCCCTTCCTCTTCAGCTCCCTTAGCTCTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 72 bp | GGAGTTAACACCCAGAGGGGAGGTCATACTGCTGGCTaGCTTACCTATAGGGAGAGGCTCCCCAAGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GVNTQRGGHTAG*LTYRERLPKAF Trigger: AAAAGCCTTGGGGAGCCTCTCCCTATAGGTAAGCCAGCCAGCAGTATGACCTCCCCTCTGGGTGTTAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 72 bp | AGTGGGAGCTGTGATGATTGGCGTGCTTTCTGGAGCTaGGGCAACAAGTACTTCTTTCAGAGCTGTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSCDDWRAFWS*GNKYFFQSCGA Trigger: GGCCCCACAGCTCTGAAAGAAGTACTTGTTGCCCCAGCTCCAGAAAGCACGCCAATCATCACAGCTCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 72 bp | GGTCTGTGGACCTTTCCGAGTGGGAGCTGTGATGATTaGCGTGCTTTCTGGAGCTGGGGCAACAAGTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLWTFPSGSCDD*RAFWSWGNKYF Trigger: GAAGTACTTGTTGCCCCAGCTCCAGAAAGCACGCCAATCATCACAGCTCCCACTCGGAAAGGTCCACAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS GCA 72 bp | TCTGTTCCAGACCCCTTGTTGTTCTTCGTAACAGGTTaGTTGGCAGAGGGGGTTGGGACAGGGATTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVPDPLLFFVTG*LAEGVGTGIPA Trigger: TGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000454682.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS CCA 72 bp | GGAAGATGCAGTAGCAGAAGCACCAGAGTCCTCAGTTaGGCACTCTTTGGGAGAGGAAGCAACAGGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GRCSSRSTRVLS*ALFGRGSNRCQ Trigger: TTGGCACCTGTTGCTTCCTCTCCCAAAGAGTGCCCAACTGAGGACTCTGGTGCTTCTGCTACTGCATCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CAA 72 bp | CTAAGGGAGCTGAAGAGGAAGGGGTCCCTTTCAGAGTaGGAGCTATCATGGGAGAGGCTAGAGCTAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRELKRKGSLSE*ELSWERLELRQ Trigger: CTGCCTTAGCTCTAGCCTCTCCCATGATAGCTCCAACTCTGAAAGGGACCCCTTCCTCTTCAGCTCCCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CAA 72 bp | GCTGCCTGGACTAACGGTAATACAGTAGGGTCTTTCTaGGTGGTGAGTCCTGCTTGGGCTGGAGAGAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAWTNGNTVGSF*VVSPAWAGEKG Trigger: CCCTTTCTCTCCAGCCCAAGCAGGACTCACCACCAAGAAAGACCCTACTGTATTACCGTTAGTCCAGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CAA 72 bp | GTTCCAGACCCCTTGTTGTTCTTCGTAACAGGTTGCTaGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VPDPLLFFVTGC*AEGVGTGIPAD Trigger: ATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000454682.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS CAA 72 bp | TTCTGTTCCAGACCCCTTGTTGTTCTTCGTAACAGGTaGCTTGGCAGAGGGGGTTGGGACAGGGATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FCSRPLVVLRNR*LGRGGWDRDSS Trigger: GCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000454682.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS TCA 72 bp | GGAGGAGAGACTGGTATCCTCAGAGTGGTTGCTACTTaGGTAGAAGGCTCTTTGGGAGCCACAGGTGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: GGETGILRVVAT*VEGSLGATGAI Trigger: TATGGCACCTGTGGCTCCCAAAGAGCCTTCTACTCAAGTAGCAACCACTCTGAGGATACCAGTCTCTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 72 bp | CCAAGGCAAATACCCTTGTTGTTCTTCGTAACAGGTTaGTTGGCAGAGGGGGTTGGGACAGGGATTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRQIPLLFFVTG*LAEGVGTGIPA Trigger: TGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CCA 72 bp | GGTAGAGGGACCTTTGTCAACAGATGGAGCCACCACTaGAAAGGCAGCCACAGTAGCAGGAACTACCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: GRGTFVNRWSHH*KGSHSSRNYLI Trigger: AATGAGGTAGTTCCTGCTACTGTGGCTGCCTTTCCAGTGGTGGCTCCATCTGTTGACAAAGGTCCCTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 72 bp | TATGCTAGAGATGGTAGAGGGACCTTTGTCAACAGATaGAGCCACCACTGGAAAGGCAGCCACAGTAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YARDGRGTFVNR*SHHWKGSHSSR Trigger: CCTGCTACTGTGGCTGCCTTTCCAGTGGTGGCTCCATCTGTTGACAAAGGTCCCTCTACCATCTCTAGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 72 bp | TGCTGCAGCAATTGTACAGGGGTTAGTCACCACAAGTaGGGTGGTTCCAACAGAAGAAACGGGCATTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CCSNCTGVSHHK*GGSNRRNGHLG Trigger: GCCCAAATGCCCGTTTCTTCTGTTGGAACCACCCCACTTGTGGTGACTAACCCCTGTACAATTGCTGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CAA 72 bp | GTAGCAGAAGCACCAGAGTCCTCAGTTGGGCACTCTTaGGGAGAGGAAGCAACAGGTGCCAATGCTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: VAEAPESSVGHS*GEEATGANAEV Trigger: TACTTCAGCATTGGCACCTGTTGCTTCCTCTCCCAAAGAGTGCCCAACTGAGGACTCTGGTGCTTCTGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CAA 72 bp | ACCAAGGCAAATACCCTTGTTGTTCTTCGTAACAGGTaGCTTGGCAGAGGGGGTTGGGACAGGGATTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TKANTLVVLRNR*LGRGGWDRDSS Trigger: GCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CAA 90 bp | GGCAAACCAAGGCAAATACCCTTGTTGTTCTTCGTAACAGGTTGCTaGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGATTTAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GKPRQIPLLFFVTGC*AEGVGTGIPADLGV Trigger: CACCCCTAAATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGGTTTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CAA 90 bp | ACTGTCAGATTCTGTTCCAGACCCCTTGTTGTTCTTCGTAACAGGTaGCTTGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGATTTAGG | + |
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Preference number: 6 (lower is better) Translates to: TVRFCSRPLVVLRNR*LGRGGWDRDSSRFR Trigger: CCTAAATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGGTCTGGAACAGAATCTGACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000454682.6 ENST00000550952.6 ENST00000678047.1 |
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| CDS CAA 90 bp | ACACGGCAAACCAAGGCAAATACCCTTGTTGTTCTTCGTAACAGGTaGCTTGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGATTTAGG | + |
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Preference number: 6 (lower is better) Translates to: TRQTKANTLVVLRNR*LGRGGWDRDSSRFR Trigger: CCTAAATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGGTTTGCCGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS GCA 72 bp | GCTCAATGTAATGTCCGTCTCCCAGGTTCAAGCAATTaGCGTGCCTCAGCCACCTTAGTAGCTGGGATTACA | + |
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Preference number: 6 (lower is better) Translates to: AQCNVRLPGSSN*RASATLVAGIT Trigger: TGTAATCCCAGCTACTAAGGTGGCTGAGGCACGGCAATTGCTTGAACCTGGGAGACGGACATTACATTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551793.5 |
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| CDS CCA 72 bp | GCAGTTCCCAAAGGTAGGGCTGTTCCAGAGGATGACTaGGGAAAAGGAACTTCTAAAGGGGTCGAGGCAATA | + |
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Preference number: 6 (lower is better) Translates to: AVPKGRAVPEDD*GKGTSKGVEAI Trigger: TATTGCCTCGACCCCTTTAGAAGTTCCTTTTCCCCAGTCATCCTCTGGAACAGCCCTACCTTTGGGAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CAA 72 bp | AGGCAAATACCCTTGTTGTTCTTCGTAACAGGTTGCTaGGCAGAGGGGGTTGGGACAGGGATTCCAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RQIPLLFFVTGC*AEGVGTGIPAD Trigger: ATCTGCTGGAATCCCTGTCCCAACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CAA 72 bp | CACCATGCACACGGCAAACCAAGGCAAATACCCTTGTaGTTCTTCGTAACAGGTTGCTTGGCAGAGGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: HHAHGKPRQIPL*FFVTGCLAEGV Trigger: AACCCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGGTTTGCCGTGTGCATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS CAA 72 bp | ACACACCATGCACACGGCAAACCAAGGCAAATACCCTaGTTGTTCTTCGTAACAGGTTGCTTGGCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: THHAHGKPRQIP*LFFVTGCLAEG Trigger: CCCCTCTGCCAAGCAACCTGTTACGAAGAACAACAAGGGTATTTGCCTTGGTTTGCCGTGTGCATGGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548386.6 |
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| CDS GCA 72 bp | AGAACTTTTGAGAAGCGGACCAGCAGAGTCTGGGCCTaGATAAGAATCTGTCTTGATTACAGAGGCCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RTFEKRTSRVWA*IRICLDYRGRG Trigger: TCCTCGGCCTCTGTAATCAAGACAGATTCTTATGCAGGCCCAGACTCTGCTGGTCCGCTTCTCAAAAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 72 bp | AGTCACACAGTGGTAAGGAACAGTACTGACTATACATaGAGGGCTGGGGGTGCCTTTTGGATTAGGGACTAC | + |
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Preference number: 6 (lower is better) Translates to: SHTVVRNSTDYT*RAGGAFWIRDY Trigger: GTAGTCCCTAATCCAAAAGGCACCCCCAGCCCTCCATGTATAGTCAGTACTGTTCCTTACCACTGTGTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 72 bp | AGGGTCAGCACTTTCCAAAGGAAATGCAGCCACTGTTaGGGTAATGAGAGAACTTTTGAGAAGCGGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RVSTFQRKCSHC*GNERTFEKRTS Trigger: GCTGGTCCGCTTCTCAAAAGTTCTCTCATTACCCCAACAGTGGCTGCATTTCCTTTGGAAAGTGCTGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 72 bp | AATAGGAGTATCAGGGCCAGCAGAACCCTTCTTGGTTaGAGGTCTTTTAGTCTGAGGAGACACACTAACCCC | + |
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Preference number: 6 (lower is better) Translates to: NRSIRASRTLLG*RSFSLRRHTNP Trigger: GGGGTTAGTGTGTCTCCTCAGACTAAAAGACCTCCAACCAAGAAGGGTTCTGCTGGCCCTGATACTCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS CCA 72 bp | GTAACTTCTCTACTTCTGAAGGCTGACTCCATTCTTTaGAGGTTTTCTGGTTGGTCCATCCTCACACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VTSLLLKADSIL*RFSGWSILTLP Trigger: GGGCAGTGTGAGGATGGACCAACCAGAAAACCTCCAAAGAATGGAGTCAGCCTTCAGAAGTAGAGAAGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356769.7 |
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| CDS TCA 72 bp | GAAATCAGAACTGAGGAAATGGTGGTATCTTTGACTTaGGGGGAAGCGATGGCTAGGGTAGTTGTGGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: EIRTEEMVVSLT*GEAMARVVVGV Trigger: AACACCCACAACTACCCTAGCCATCGCTTCCCCTCAAGTCAAAGATACCACCATTTCCTCAGTTCTGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 72 bp | AACACAAGTAGCTACCTCAAAGGTAGTAGTAGGTGCTaGAGCAATTGTACAGGGGTTAGTCACCACAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: NTSSYLKGSSRC*SNCTGVSHHKW Trigger: CCACTTGTGGTGACTAACCCCTGTACAATTGCTGCAGCACCTACTACTACCTTTGAGGTAGCTACTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS CCA 72 bp | AGTACTGACTATACATGGAGGGCTGGGGGTGCCTTTTaGATTAGGGACTACCTCAGAGGGAACTTTATTAAG | + |
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Preference number: 6 (lower is better) Translates to: STDYTWRAGGAF*IRDYLRGNFIK Trigger: CTTAATAAAGTTCCCTCTGAGGTAGTCCCTAATCCAAAAGGCACCCCCAGCCCTCCATGTATAGTCAGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 72 bp | AGAAACACAAGTAGCTACCTCAAAGGTAGTAGTAGGTaGTGCAGCAATTGTACAGGGGTTAGTCACCACAAG | + |
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Preference number: 6 (lower is better) Translates to: RNTSSYLKGSSR*CSNCTGVSHHK Trigger: CTTGTGGTGACTAACCCCTGTACAATTGCTGCAGCACCTACTACTACCTTTGAGGTAGCTACTTGTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454682.6 ENST00000550952.6 |
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| CDS GCA 72 bp | GTACTTCACCACAGCCTGCCCTGGACTAGAGGTGAATaGCTCATGCTAGACCTAAGAATGTTAAATGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: VLHHSLPWTRGE*LMLDLRMLNVN Trigger: GTTTACATTTAACATTCTTAGGTCTAGCATGAGGCATTCACCTCTAGTCCAGGGCAGGCTGTGGTGAAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548386.6 ENST00000676873.1 |
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| CDS CAA 90 bp | TTCACAGTTCCAAATACAAAAGTTGCCCTGATCAACCCTGCTTCTTaGACCCAATACCAGTTAGTAAGAGAATACCCACCTGGGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FTVPNTKVALINPAS*TQYQLVREYPPGLV Trigger: AACAAGCCCAGGTGGGTATTCTCTTACTAACTGGTATTGGGTCAAAGAAGCAGGGTTGATCAGGGCAACTTTTGTATTTGGAACTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551520.1 |
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| CDS CAA 72 bp | CTACCACTACTAAGAATTGGGTTCAGTGTATACTGCTaGGGTGACAGGTGCACCAAAATCTCAAAAATCACC | + |
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Preference number: 6 (lower is better) Translates to: LPLLRIGFSVYC*GDRCTKISKIT Trigger: GGTGATTTTTGAGATTTTGGTGCACCTGTCACCCAAGCAGTATACACTGAACCCAATTCTTAGTAGTGGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551793.5 |
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| CDS CAA 72 bp | CCAAATACAAAAGTTGCCCTGATCAACCCTGCTTCTTaGACCCAATACCAGTTAGTAAGAGAATACCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PNTKVALINPAS*TQYQLVREYPP Trigger: AGGTGGGTATTCTCTTACTAACTGGTATTGGGTCAAAGAAGCAGGGTTGATCAGGGCAACTTTTGTATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551520.1 |
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| CDS CAA 90 bp | AACGGGATTCTACCACTACTAAGAATTGGGTTCAGTGTATACTGCTaGGGTGACAGGTGCACCAAAATCTCAAAAATCACCACTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: NGILPLLRIGFSVYC*GDRCTKISKITTRE Trigger: TTCTCTAGTGGTGATTTTTGAGATTTTGGTGCACCTGTCACCCAAGCAGTATACACTGAACCCAATTCTTAGTAGTGGTAGAATCCCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551793.5 |
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| CDS CAA 72 bp | GCTAGACCTAAGAATGTTAAATGTAAACCAACTGGCTaGTGTGAAGTCAGCTTGATAGCCCCTAACTTAGTC | + |
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Preference number: 6 (lower is better) Translates to: ARPKNVKCKPTG*CEVSLIAPNLV Trigger: GACTAAGTTAGGGGCTATCAAGCTGACTTCACACAAGCCAGTTGGTTTACATTTAACATTCTTAGGTCTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548386.6 ENST00000676873.1 |
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| CDS GCA 72 bp | CACAGTTCCAAATACAAAAGTTGCCCTGATCAACCCTaGTTCTTTGACCCAATACCAGTTAGTAAGAGAATA | + |
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Preference number: 6 (lower is better) Translates to: HSSKYKSCPDQP*FFDPIPVSKRI Trigger: TATTCTCTTACTAACTGGTATTGGGTCAAAGAAGCAGGGTTGATCAGGGCAACTTTTGTATTTGGAACTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551520.1 |
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| CDS CCA 72 bp | AAGGGTAAAGTAGTAAGAGTACCTTCCTTAACTGGGTaGTTTTTAGGAGCTAAAGAGACAGTTCCTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: KGKVVRVPSLTG*FLGAKETVPSR Trigger: TCTAGAAGGAACTGTCTCTTTAGCTCCTAAAAACCACCCAGTTAAGGAAGGTACTCTTACTACTTTACCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454682.6 |
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| CDS TCA 72 bp | TTGATTGTTTTAGGTTCACGACAATTTAGCCGATGTTaGAATTATAAAGCTGCAGATTCTCCTTCCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LIVLGSRQFSRC*NYKAADSPSQK Trigger: TTTCTGGGAAGGAGAATCTGCAGCTTTATAATTTCAACATCGGCTAAATTGTCGTGAACCTAAAACAATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356769.7 |
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