RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NABP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173559

Ensembl transcript IDs: ENST00000307834.9, ENST00000307849.7, ENST00000409510.5, ENST00000410026.7, ENST00000425611.9, ENST00000435931.1, ENST00000451500.5, ENST00000462712.5, ENST00000462824.1, ENST00000491331.5, ENST00000674172.1, ENST00000674187.1, ENST00000674262.1, ENST00000674360.1, ENST00000674406.1, ENST00000674414.1

Found 1675 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGGGCATGGTGGCTCCCCTCTGTAGTCCCAGCTATTCAGGAGCCTaGGGTGGGAGAATCGCCTCAATCTTGGAGGCAGAGGTTGCAGTG +
Preference number: 1 (lower is better)
Translates to: PGMVAPLCSPSYSGA*GGRIASILEAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCTCCCACCTCAGGCTCCTGAATAGCTGGGACTACAGAGGGGAGCCACCATGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp CAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCACTAACCTCCTTTCTGACACAAACC +
Preference number: 1 (lower is better)
Translates to: QGLSPGTENSFQCAL*LALSKPLTSFLTQT
Trigger: GGTTTGTGTCAGAAAGGAGGTTAGTGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp GCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAGCAAGCCACTAACCTCCTTTCTGAC +
Preference number: 1 (lower is better)
Translates to: AIPRAVTGNREFLPM*PLPGPKQATNLLSD
Trigger: GTCAGAAAGGAGGTTAGTGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp TTCAAGAGATGGCTTGATGGCTGCTCCCTTCTAGGCCCTTCCTTATaGTCACGCAGGGCACTTGGTAAAGAGAAAAGAGCCAAGAGGGCA +
Preference number: 1 (lower is better)
Translates to: FKRWLDGCSLLGPSL*SRRALGKEKRAKRA
Trigger: TGCCCTCTTGGCTCTTTTCTCTTTACCAAGTGCCCTGCGTGAGCATAAGGAAGGGCCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp AAGCCCACTGCAAACACTGAAGTTCCAGGATACTCCCTCTACTCTTaGCACTCTATCTCTGAGGACTTCATATCACGCCCTGCCACAGGC +
Preference number: 1 (lower is better)
Translates to: KPTANTEVPGYSLYS*HSISEDFISRPATG
Trigger: GCCTGTGGCAGGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR GCA 90 bp CCTCCTACTCACTCAATACTACCCAATGCCCTTCTGGATGTATGCTaGATGACAACCAGCAGACAGCTGGGAGTATGTGAGACTCACCAC +
Preference number: 1 (lower is better)
Translates to: PPTHSILPNALLDVC*MTTSRQLGVCETHH
Trigger: GTGGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGCATTGGGTAGTATTGAGTGAGTAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp CAAGTCACTGCAAACACTGAAGTTCCAGGATACTCCCTCTACTCTTaGCACTCTATCTCTGAGGACTTCATATCACGCCCTGCCACAGGC +
Preference number: 1 (lower is better)
Translates to: QVTANTEVPGYSLYS*HSISEDFISRPATG
Trigger: GCCTGTGGCAGGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
3UTR GCA 90 bp TCTCCTCCTACTCACTCAATACTACCCAATGCCCTTCTGGATGTATaGTGCATGACAACCAGCAGACAGCTGGGAGTATGTGAGACTCAC +
Preference number: 1 (lower is better)
Translates to: SPPTHSILPNALLDV*CMTTSRQLGVCETH
Trigger: GTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGCATTGGGTAGTATTGAGTGAGTAGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp AAAGAGCCTGGTATCTCTCTTGCTTCCTCTCGTCATGTAATATGCTaGCTCCTCTTCTCTTCCACCAAGACCAAAAGCTTCCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: KEPGISLASSRHVIC*LLFSSTKTKSFLGL
Trigger: GAGGCCCAGGAAGCTTTTGGTCTTGGTGGAAGAGAAGAGGAGCCAGCATATTACATGACGAGAGGAAGCAAGAGAGATACCAGGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR GCA 90 bp GCAATACCCTCATCCAGAGGCCATACTGAACCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAACAATTCTGCCCTCTGGAGGGACAT +
Preference number: 1 (lower is better)
Translates to: AIPSSRGHTEPLILL*AICFTQQFCPLEGH
Trigger: ATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGATGAGGGTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp AACCTGGACCCACAAGTTCTCTGTACTTTCATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAAACACCAGTGTACTCAGCTAGTGGG +
Preference number: 1 (lower is better)
Translates to: NLDPQVLCTFIILSC*AEVNGKTPVYSASG
Trigger: CCCACTAGCTGAGTACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGGACAAGATGATGAAAGTACAGAGAACTTGTGGGTCCAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp CTACTCACTCAATACTACCCAATGCCCTTCTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGGGAGTATGTGAGACTCACCACATTT +
Preference number: 1 (lower is better)
Translates to: LLTQYYPMPFWMYAA*QPADSWEYVRLTTF
Trigger: AAATGTGGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGCATTGGGTAGTATTGAGTGAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp TGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCTCAATaGCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATT +
Preference number: 1 (lower is better)
Translates to: WQSQGSKHFKREQAQ*PSTFQSSVAIKFAI
Trigger: AATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR CCA 90 bp AATTTTTCTGCAAACACTGAAGTTCCAGGATACTCCCTCTACTCTTaGCACTCTATCTCTGAGGACTTCATATCACGCCCTGCCACAGGC +
Preference number: 1 (lower is better)
Translates to: NFSANTEVPGYSLYS*HSISEDFISRPATG
Trigger: GCCTGTGGCAGGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTATCCTGGAACTTCAGTGTTTGCAGAAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR TCA 90 bp GCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGTAGTTGTGGATTTATAAGTCCCCGG +
Preference number: 1 (lower is better)
Translates to: ALRGSLPLLIVVITV*LLAVPCSCGFISPR
Trigger: CCGGGGACTTATAAATCCACAACTACAAGGAACAGCTAGTAATCAAACAGTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR TCA 90 bp CACAAGTTCTCTGTACTTTCATCATCTTGTCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGTACTCAGCTAGTGGGCAGATCTTTG +
Preference number: 1 (lower is better)
Translates to: HKFSVLSSSCPAGQR*MEKHQCTQLVGRSL
Trigger: CAAAGATCTGCCCACTAGCTGAGTACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGGACAAGATGATGAAAGTACAGAGAACTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp AATTTGCAATACCCTCATCCAGAGGCCATACTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTACCCAACAATTCTGCCCTCTGGAGG +
Preference number: 1 (lower is better)
Translates to: NLQYPHPEAILNLLF*SALYALPNNSALWR
Trigger: CCTCCAGAGGGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGATGAGGGTATTGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp ACAAACCTGGACCCACAAGTTCTCTGTACTTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGAAAAACACCAGTGTACTCAGCTAGT +
Preference number: 1 (lower is better)
Translates to: TNLDPQVLCTFIILS*WAEVNGKTPVYSAS
Trigger: ACTAGCTGAGTACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGGACAAGATGATGAAAGTACAGAGAACTTGTGGGTCCAGGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp TCAATATACATCTTCACTGCTCCATTGTTTTACTCCTCCCCCACCTaGCTTGCAACTGCCCTCCCAAATTTAGGTGTCTACTTAGTGGGA +
Preference number: 1 (lower is better)
Translates to: SIYIFTAPLFYSSPT*LATALPNLGVYLVG
Trigger: TCCCACTAAGTAGACACCTAAATTTGGGAGGGCAGTTGCAAGCCAGGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGATGTATATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp GTCAATAAACTCTCAAGAGACCTGTGCTCTTTTATAGGTCAACAATaGTCATCCAAGCCCACACGTTCTCAAAGCCTGGGGAGCCACAAT +
Preference number: 1 (lower is better)
Translates to: VNKLSRDLCSFIGQQ*SSKPTRSQSLGSHN
Trigger: ATTGTGGCTCCCCAGGCTTTGAGAACGTGTGGGCTTGGATGATCATTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAGTTTATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp TCATCCAGAGGCCATACTGAACCTCTTATTCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGCCCTCTGGAGGGACATTCTTTTAAG +
Preference number: 1 (lower is better)
Translates to: SSRGHTEPLILLCAI*FTQQFCPLEGHSFK
Trigger: CTTAAAAGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp ATTGAAAGAATGATGGCTGCTGGGGCCATGGAAAAAGAGATTGACTaGGGAAGGCACATTACAGAGGCTTCTAGAATGACAGCAATGTTC +
Preference number: 1 (lower is better)
Translates to: IERMMAAGAMEKEID*GRHITEASRMTAMF
Trigger: GAACATTGCTGTCATTCTAGAAGCCTCTGTAATGTGCCTTCCCCAGTCAATCTCTTTTTCCATGGCCCCAGCAGCCATCATTCTTTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp ATTTCAAGTGTAATAACTCATCCAACATCACAGGTGAGGAGACAATaGGGCCAGGATTGGAAGCCCAGCATTCCATACCTGACAGCATTT +
Preference number: 1 (lower is better)
Translates to: ISSVITHPTSQVRRQ*GQDWKPSIPYLTAF
Trigger: AAATGCTGTCAGGTATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGATGAGTTATTACACTTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp CTCTCCGTTCACAGTAAAGCTTCACTCCGTAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGTCTGCTGCTTGACTTCTCCTTTAGG +
Preference number: 1 (lower is better)
Translates to: LSVHSKASLRKLKVF*IIMKMCLLLDFSFR
Trigger: CCTAAAGGAGAAGTCAAGCAGCAGACACATCTTCATAATGATTCAGAAGACCTTCAGCTTACGGAGTGAAGCTTTACTGTGAACGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp AGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTaGTATTGTCATTTTGATCATGCAGGACACATGGACAAGCCCACT +
Preference number: 1 (lower is better)
Translates to: SSMPKHFSIFCGHQV*YCHFDHAGHMDKPT
Trigger: AGTGGGCTTGTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR CCA 90 bp GGACTAACCAAAGACGTGCAAACATATTTCCCTGCTTCCATGGAATaGGTATACCACCGTCTATTTGCAAATCATCTACCATGGAGAGAC +
Preference number: 1 (lower is better)
Translates to: GLTKDVQTYFPASME*VYHRLFANHLPWRD
Trigger: GTCTCTCCATGGTAGATGATTTGCAAATAGACGGTGGTATACCCATTCCATGGAAGCAGGGAAATATGTTTGCACGTCTTTGGTTAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR TCA 90 bp CTTACTCACCATAGAACCTTGTTCTATTTAACCCTAATTTTGCCCTaGTCAGAGGCACTAGAGTTATGGTCTGGCTTAGCTGCACTTTTG +
Preference number: 1 (lower is better)
Translates to: LTHHRTLFYLTLILP*SEALELWSGLAALL
Trigger: CAAAAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTCTGATCAGGGCAAAATTAGGGTTAAATAGAACAAGGTTCTATGGTGAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp CTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTGCTaGCTCATGACCTCAATTGTGACACCTGCTCTAGTTATGTTTTGC +
Preference number: 1 (lower is better)
Translates to: LECLPHLLYLQSSLC*LMTSIVTPALVMFC
Trigger: GCAAAACATAACTAGAGCAGGTGTCACAATTGAGGTCATGAGTCAGCAAAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp TTGCTAATAAGGCTATGTGAACTGTGTTCAGAAACTTTGACAACATaGACACTCACTCCTCTCAAAGTCAGTACCCAGGATTTTCACTCC +
Preference number: 1 (lower is better)
Translates to: LLIRLCELCSETLTT*TLTPLKVSTQDFHS
Trigger: GGAGTGAAAATCCTGGGTACTGACTTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAGTTCACATAGCCTTATTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp CATTTCCCACTGGTCCAAATGTACCTGTACCCATATTACTATTCATaGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTGTC +
Preference number: 1 (lower is better)
Translates to: HFPLVQMYLYPYYYS*NYSSVHSVPLCSAV
Trigger: GACAGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATATGGGTACAGGTACATTTGGACCAGTGGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR CCA 90 bp TCCATGGAATGGGTATACCACCGTCTATTTGCAAATCATCTACCATaGAGAGACATTCCTAAACGTGGGCGATATGGTTTGGATATTTGT +
Preference number: 1 (lower is better)
Translates to: SMEWVYHRLFANHLP*RDIPKRGRYGLDIC
Trigger: ACAAATATCCAAACCATATCGCCCACGTTTAGGAATGTCTCTCCATGGTAGATGATTTGCAAATAGACGGTGGTATACCCATTCCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR TCA 90 bp TGCATACACTCCCTTTCAAAACTAACTCCAATTCTATATCCTCTATaGAGCACCATCCACTGTCAGCAGCAGCCTCAATGTTTCACTATT +
Preference number: 1 (lower is better)
Translates to: CIHSLSKLTPILYPL*STIHCQQQPQCFTI
Trigger: AATAGTGAAACATTGAGGCTGCTGCTGACAGTGGATGGTGCTTCATAGAGGATATAGAATTGGAGTTAGTTTTGAAAGGGAGTGTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR GCA 90 bp AATCTGCACAAAAATCCCAAGCCCATGACGAAACAAACAGAAATGTaGATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCAAGGTTCAT +
Preference number: 1 (lower is better)
Translates to: NLHKNPKPMTKQTEM*MLLYLGPLKAVKVH
Trigger: ATGAACCTTGACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTCATGGGCTTGGGATTTTTGTGCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp TCAGAAGTCCAGGCATGGCTGTTTACAAATGTTCAAACATGGTCTTaGGAAGCTCCTCTGTATCTTAGCTCTTCATTTCTCTATGCTTTA +
Preference number: 1 (lower is better)
Translates to: SEVQAWLFTNVQTWS*EAPLYLSSSFLYAL
Trigger: TAAAGCATAGAGAAATGAAGAGCTAAGATACAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGTAAACAGCCATGCCTGGACTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR CCA 90 bp TTTAACTCAGAAGTCCAGGCATGGCTGTTTACAAATGTTCAAACATaGTCTTGGGAAGCTCCTCTGTATCTTAGCTCTTCATTTCTCTAT +
Preference number: 1 (lower is better)
Translates to: FNSEVQAWLFTNVQT*SWEAPLYLSSSFLY
Trigger: ATAGAGAAATGAAGAGCTAAGATACAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGTAAACAGCCATGCCTGGACTTCTGAGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR TCA 90 bp TGCTATTTTCCAAAGGTCTCAATTAGATTTCCTCAGAAGCATACCTaGACTGTTAATCATTACAACTCCTTTGTGAAACATGGGACTGGT +
Preference number: 1 (lower is better)
Translates to: CYFPKVSIRFPQKHT*TVNHYNSFVKHGTG
Trigger: ACCAGTCCCATGTTTCACAAAGGAGTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGGAAATCTAATTGAGACCTTTGGAAAATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp CTACTAGTCAAACTTCTTAAAATGTTCGTTGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAAAAGCTCTTAGTAACATCTTTGGGT +
Preference number: 1 (lower is better)
Translates to: LLVKLLKMFVVFTSR*FSHSSKKLLVTSLG
Trigger: ACCCAAAGATGTTACTAAGAGCTTTTTACTACTGTGAGAGAACCAGCGTGATGTGAAGACAACGAACATTTTAAGAAGTTTGACTAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp AAATTTGGGATGAGTCAGTCCTTGGAAAATCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCGAGAGCCACAAACACTCAAAAATTA +
Preference number: 1 (lower is better)
Translates to: KFGMSQSLENLNSSH*TKSIIPRATNTQKL
Trigger: TAATTTTTGAGTGTTTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCAAGGACTGACTCATCCCAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp TCTTTGATAGAGCCATTTCTTAAAACTTTTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTTGACAACATGCACACTCACTCCTCT +
Preference number: 1 (lower is better)
Translates to: SLIEPFLKTFANKAM*TVFRNFDNMHTHSS
Trigger: AGAGGAGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAGTTCACATAGCCTTATTAGCAAAAGTTTTAAGAAATGGCTCTATCAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 90 bp ACTACAACAGTAGTTAAGATGTACTGGCTCTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTAGGTTTGTTAACATTAACACATGCT +
Preference number: 1 (lower is better)
Translates to: TTTVVKMYWLSTVSH*KGKNYVGLLTLTHA
Trigger: AGCATGTGTTAATGTTAACAAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATCTTAACTACTGTTGTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 90 bp TTAATGTCAGTGTTGATTGTTCATAAACTAAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCATATCATACTTAACACCACTATCAGG +
Preference number: 1 (lower is better)
Translates to: LMSVLIVHKLNKWPN*PLRIFHIILNTTIR
Trigger: CCTGATAGTGGTGTTAAGTATGATATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTTTAGTTTATGAACAATCAACACTGACATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp ATAGTAATAGGGCAAGTAAACTCAGTGAGGTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTTAGTTTCATATCATGTTCAGTTTGT +
Preference number: 1 (lower is better)
Translates to: IVIGQVNSVRLEEFV*GAFYVVSFISCSVC
Trigger: ACAAACTGAACATGATATGAAACTAACAACATAGAATGCCCCCCAAACAAATTCCTCTAACCTCACTGAGTTTACTTGCCCTATTACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 90 bp CATATAGTTAGTGCTCAACAAAGTATAGGCAGCCCATTAAAGAAGTaGAAGGAGAGAATCCTTAAACAATTGATGAGAAAGAAAAGCAAA +
Preference number: 1 (lower is better)
Translates to: HIVSAQQSIGSPLKK*KERILKQLMRKKSK
Trigger: TTTGCTTTTCTTTCTCATCAATTGTTTAAGGATTCTCTCCTTCCACTTCTTTAATGGGCTGCCTATACTTTGTTGAGCACTAACTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp GAGGAGGAGCAGGGGAGGGCAGGCAAATCTGGGAGAAGGTGTGGTTaGGATGGACTGCCTTGGAAAGAGAATAGAAAGTTGAGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: EEEQGRAGKSGRRCG*DGLPWKENRKLRGG
Trigger: CCCTCCTCTCAACTTTCTATTCTCTTTCCAAGGCAGTCCATCCAAACCACACCTTCTCCCAGATTTGCCTGCCCTCCCCTGCTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp GTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAACACCATTTCCCACTGGTCCAAATG +
Preference number: 2 (lower is better)
Translates to: VPGHCFCQHVKTGVP*IQGQCEHHFPLVQM
Trigger: CATTTGGACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCAGGACCCCATCTCCTaGAGTAGCCTCCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLQDPIS*SSLQLF
Trigger: GAAGAGCTGGAGGCTACTGCAGGAGATGGGGTCCTG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGCCCACTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKAHCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGGGC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCCACCCTTCCCCCTTaGATGTCTTCCTCATCTCTT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPTLPP*MSSSSL
Trigger: AAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 2 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPNRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGACAGGCTCCTCCTCTTaGTTAGAACTGTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKTGSSS*LELFRA
Trigger: TGCCCTGAACAGTTCTAAGCAAGAGGAGGAGCCTGT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp GGCCTTCTTCCTGTGTGTTTGATTCCATTGCCCCACCCTTCCCCCTaGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: GLLPVCLIPLPHPSP*NVFLISCTFSLVFA
Trigger: AGCAAAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGGGCAATGGAATCAAACACACAGGAAGAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCACTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: SPRPLLLPACENWCSLDSLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR TCA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 2 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACGGGGTGTCTTTACTTaGCAAGTAACTTACACTCTC +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLRGVFT*QVTYTL
Trigger: GAGAGTGTAAGTTACTTGTCAAGTAAAGACACCCCG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR GCA 90 bp AGGTCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 2 (lower is better)
Translates to: RSSFKGSPRVPAITYCGHPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...ATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCAAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 2 (lower is better)
Translates to: SPRPLLLPACENWCSLDSNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 2 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTATATCTTCTGAAGAACTaGGCAACTGACCTGCAAACA +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLYLLKN*ATDLQT
Trigger: TGTTTGCAGGTCAGTTGCTCAGTTCTTCAGAAGATA...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACTGGCTATGCGGATTCTaGATGCCAACCTTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDWLCGF*MPTLEY
Trigger: GTACTCCAAGGTTGGCATTCAGAATCCGCATAGCCA...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAGCCTCCAGCTCTTCTaGTTACTTTCCCCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLSLQLF*LLSPRK
Trigger: TTTCCTTGGGGAAAGTAATCAGAAGAGCTGGAGGCT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR GCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLNRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGAGGCACTAGAGTTATaGTCTGGCTTAGCTGCACTT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLEALEL*SGLAAL
Trigger: AAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp TTACTAGCTGTTCCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCAGGG +
Preference number: 2 (lower is better)
Translates to: LLAVPCSCGFISPRP*LLPACENWCSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGGAACAGCTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCAGTCTAGTCTTTGCTaGCTCATGACCTCAATTGTG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLQSSLC*LMTSIV
Trigger: CACAATTGAGGTCATGAGTCAGCAAAGACTAGACTG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR GCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTCTGCAGGCTATGTCTaGATAATACTCTCCGTTCAC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLSAGYV*IILSVH
Trigger: GTGAACGGAGAGTATTATGCAGACATAGCCTGCAGA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 2 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAAGGTGTGGTTTGGATaGACTGCCTTGGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLKVWFG*TALERE
Trigger: TTCTCTTTCCAAGGCAGTCCATCCAAACCACACCTT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTTTATAGGTCAACAATaGTCATCCAAGCCCACACGT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLFIGQQ*SSKPTR
Trigger: ACGTGTGGGCTTGGATGATCATTGTTGACCTATAAA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGAAGAACTGAGCAACTaGCCTGCAAACACTGAAGTT +
Preference number: 2 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDEELSN*PANTEV
Trigger: AACTTCAGTGTTTGCAGGTCAGTTGCTCAGTTCTTC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGTGGGCGATATGGTTTaGATATTTGTCTCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDVGDMV*IFVSSK
Trigger: CTTCGAGGAGACAAATATCCAAACCATATCGCCCAC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CAA 90 bp TATGAAGCACCATCCACTGTCAGCAGCAGCCTCAATGTTTCACTATaGCTCAACTGTAATAGTATAGGCTTTGGTGTGTTGGACTCAGTC +
Preference number: 2 (lower is better)
Translates to: YEAPSTVSSSLNVSL*LNCNSIGFGVLDSV
Trigger: GACTGAGTCCAACACACCAAAGCCTATACTATTACAGTTGAGCAATAGTGAAACATTGAGGCTGCTGCTGACAGTGGATGGTGCTTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: PRATNTQKLLLALTSSCVKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR TCA 90 bp AGGTCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: RSSFKGSPRVPAITYCGHVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...ATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTCTTCTGAATCATTATaGAGATGTGTCTGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLSSESL*RCVCCL
Trigger: CAAGCAGCAGACACATCTTCATAATGATTCAGAAGA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTACAGGCTCCTCCTCTTaGTTAGAACTGTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCTGSSS*LELFRA
Trigger: TGCCCTGAACAGTTCTAAGCAAGAGGAGGAGCCTGT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTCAATTGTGACACCTaGTCTAGTTATGTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLNCDT*SSYVLL
Trigger: GAGCAAAACATAACTAGAGCAGGTGTCACAATTGAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 2 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 2 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGTCAGAGACAGTGGTTaGTCATTTTCATTTGACTTC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLVRDSG*SFSFDF
Trigger: GAAGTCAAATGAAAATGACCAACCACTGTCTCTGAC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp AAACATATTTCCCTGCTTCCATGGAATGGGTATACCACCGTCTATTaGCAAATCATCTACCATGGAGAGACATTCCTAAACGTGGGCGAT +
Preference number: 2 (lower is better)
Translates to: KHISLLPWNGYTTVY*QIIYHGETFLNVGD
Trigger: ATCGCCCACGTTTAGGAATGTCTCTCCATGGTAGATGATTTGCAAATAGACGGTGGTATACCCATTCCATGGAAGCAGGGAAATATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CAA 90 bp AGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATTGTCATTTaGATCATGCAGGACACATGGACAAGCCCACTGCAAACACTGAAG +
Preference number: 2 (lower is better)
Translates to: STFQSSVAIKFAIVI*IMQDTWTSPLQTLK
Trigger: CTTCAGTGTTTGCAGTGGGCTTGTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLKLKVF*IIMKMC
Trigger: ACACATCTTCATAATGATTCAGAAGACCTTCAGCTT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCAT +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTNKWPN*PLRIFH
Trigger: ATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACTTTTTACTGTTTGTGTaGTGGTTAGGGAGAGTATCC +
Preference number: 2 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDFLLFV*WLGRVS
Trigger: GGATACTCTCCCTAACCACCACACAAACAGTAAAAA...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGAGGCACTAGAGTTATaGTCTGGCTTAGCTGCACTT +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCEALEL*SGLAAL
Trigger: AAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp AGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATTGTCATTTaGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: STFQSSVAIKFAIVI*IMQDTWTSPLSVEK
Trigger: CTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSAKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR TCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR TCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGAGAATCAATATCTTCTaGAGAACTGAGCAACTGACC +
Preference number: 2 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTRINIF*RTEQLT
Trigger: GGTCAGTTGCTCAGTTCTTCAGAAGATATTGATTCT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGG +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIWMYAA*QPADSW
Trigger: CCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTTCTGCAGGCTATGTCTaGATAATACTCTCCGTTCAC +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCSAGYV*IILSVH
Trigger: GTGAACGGAGAGTATTATGCAGACATAGCCTGCAGA...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAATATACATCTTCACTaGTCCATTGTTTTACTCCTC +
Preference number: 2 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLNIHLH*SIVLLL
Trigger: GAGGAGTAAAACAATGGAGCAGTGAAGATGTATATT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 2 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADISSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGAGGGCAGGCAAATCTaGGAGAAGGTGTGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIEGRQI*EKVWFG
Trigger: TCCAAACCACACCTTCTCCCAGATTTGCCTGCCCTC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 2 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTTCAAGAGATGGCTTaGTGGCTGCTCCCTTCTAGG +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIFQEMA*WLLPSR
Trigger: CCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGTTCGTGTATATACGTaGACGTGCACATGGACTGGG +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHVRVYT*TCTWTG
Trigger: CCCAGTCCATGTGCACGTGCACGTATATACACGAAC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 2 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 2 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSAPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATCTGGGAGAAGGTGTaGTTTGGATGGACTGCCTTG +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIIWEKV*FGWTAL
Trigger: CAAGGCAGTCCATCCAAACCACACCTTCTCCCAGAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTACAAATGTTCAAACATaGTCTTGGGAAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCTNVQT*SWEAPL
Trigger: CAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR CAA 90 bp ATTACAACAGCAGCAGTCATTTGGCCAGGATTTTACCAAATACCATaGGGTAAAGGAATGAAATTTCTAAGGGCAGTGTCGTGTTCTACT +
Preference number: 2 (lower is better)
Translates to: ITTAAVIWPGFYQIP*GKGMKFLRAVSCST
Trigger: AGTAGAACACGACACTGCCCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 2 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCLPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTCTTTACGTGGAAGATaGAGGGTGGTTTCTCTAAGT +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFSLRGR*RVVSLS
Trigger: ACTTAGAGAAACCACCCTTCATCTTCCACGTAAAGA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATTTGTTCTCACTCATGTaGCTGAAGTCAGCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLFSLM*LKSAGN
Trigger: GTTGCCAGCTGACTTCAGTCACATGAGTGAGAACAA...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADINRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 2 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGATCAGTATCAATTCTaGCCTGCTAGGAACAGGAAC +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANDQYQF*PARNRN
Trigger: GTTCCTGTTCCTAGCAGGCCAGAATTGATACTGATC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTTGTGAAACATGGGACTaGTTGATTACCCAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCCETWD*LITQCN
Trigger: ATTACACTGGGTAATCAACCAGTCCCATGTTTCACA...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 90 bp AGGCACATTACAGAGGCTTCTAGAATGACAGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAC +
Preference number: 2 (lower is better)
Translates to: RHITEASRMTAMFCI*IEVAIKPRYLLKLN
Trigger: GTTGAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACATTGCTGTCATTCTAGAAGCCTCTGTAATGTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 2 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTTTGCTGGCATAACTaGGCAGCTGAATGTCACTCT +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIFCWHN*AAECHS
Trigger: AGAGTGACATTCAGCTGCTCAGTTATGCCAGCAAAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 2 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSALSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGATCAGTATCAATTCTaGCCTGCTAGGAACAGGAAC +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRDQYQF*PARNRN
Trigger: GTTCCTGTTCCTAGCAGGCCAGAATTGATACTGATC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTGTGAAACATGGGACTaGTTGATTACCCAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFCETWD*LITQCN
Trigger: ATTACACTGGGTAATCAACCAGTCCCATGTTTCACA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTTATAGGTCAACAATaGTCATCCAAGCCCACACGT +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRFIGQQ*SSKPTR
Trigger: ACGTGTGGGCTTGGATGATCATTGTTGACCTATAAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTCTTTACGTGGAAGATaGAGGGTGGTTTCTCTAAGT +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADISLRGR*RVVSLS
Trigger: ACTTAGAGAAACCACCCTTCATCTTCCACGTAAAGA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 2 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCAT +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHNKWPN*PLRIFH
Trigger: ATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTCTTCATTTCTCTATaGTTTATTCCCCAGAAGAAT +
Preference number: 2 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLFISL*FIPQKN
Trigger: ATTCTTCTGGGGAATAAAGCATAGAGAAATGAAGAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADITEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADILNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTCAATTGTGACACCTaGTCTAGTTATGTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADILNCDT*SSYVLL
Trigger: GAGCAAAACATAACTAGAGCAGGTGTCACAATTGAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADILPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADINTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADILGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 2 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 2 (lower is better)
Translates to: TVWIYSNITCSQTTFADILFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 2 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAGGTGATCCACCCACCTaGGCCTCTCAAAGCGCTGGG +
Preference number: 3 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLGDPPT*ASQSAG
Trigger: CCCAGCGCTTTGAGAGGCCAAGGTGGGTGGATCACC...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR GCA 72 bp AGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAGCAAGCCACTAACCTC +
Preference number: 3 (lower is better)
Translates to: RAVTGNREFLPM*PLPGPKQATNL
Trigger: GAGGTTAGTGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp TCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCACTAACCTCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: SPGTENSFQCAL*LALSKPLTSFL
Trigger: CAGAAAGGAGGTTAGTGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp GGCTCCTCTTCTCTTCCACCAAGACCAAAAGCTTCCTaGGCCTCATCAGAAGCTGAGCAGATGCTAACAGCC +
Preference number: 3 (lower is better)
Translates to: GSSSLPPRPKAS*ASSEAEQMLTA
Trigger: GGCTGTTAGCATCTGCTCAGCTTCTGATGAGGCCCAGGAAGCTTTTGGTCTTGGTGGAAGAGAAGAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR TCA 72 bp GAGCTCAGTGCTGTCCTTCTGTTGTTCTCACTCATGTaGCTGAAGTCAGCTGGCAACTCAGCTGGAGCTGGA +
Preference number: 3 (lower is better)
Translates to: ELSAVLLLFSLM*LKSAGNSAGAG
Trigger: TCCAGCTCCAGCTGAGTTGCCAGCTGACTTCAGTCACATGAGTGAGAACAACAGAAGGACAGCACTGAGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 3 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCCCACCCTTCCCCCTaGAATGTCTTCCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPHPSP*NVFLIS
Trigger: AGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp GACAGACTCATCCATGTGTCTGGTGTAAGCAGGCTGTaGGCCAAGGTTTCTCAAGTGACCTCTCATCCTCCA +
Preference number: 3 (lower is better)
Translates to: DRLIHVSGVSRL*AKVSQVTSHPP
Trigger: TGGAGGATGAGAGGTCACTTGAGAAACCTTGGCTCACAGCCTGCTTACACCAGACACATGGATGAGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR TCA 72 bp TCATGCAGGACACATGGACAAGCCCACTGCAAACACTaGAGTTCCAGGATACTCCCTCTACTCTTGGCACTC +
Preference number: 3 (lower is better)
Translates to: SCRTHGQAHCKH*SSRILPLLLAL
Trigger: GAGTGCCAAGAGTAGAGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGGGCTTGTCCATGTGTCCTGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR GCA 72 bp TTCTTCTCTGCCAATTTCAAGAGATGGCTTGATGGCTaGTCCCTTCTAGGCCCTTCCTTATGCTCACGCAGG +
Preference number: 3 (lower is better)
Translates to: FFSANFKRWLDG*SLLGPSLCSRR
Trigger: CCTGCGTGAGCATAAGGAAGGGCCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAAATTGGCAGAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp ATGCTGCATGACAACCAGCAGACAGCTGGGAGTATGTaGGACTCACCACATTTTCCACAACAAGGGCAAACC +
Preference number: 3 (lower is better)
Translates to: MLHDNQQTAGSM*DSPHFPQQGQT
Trigger: GGTTTGCCCTTGTTGTGGAAAATGTGGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTGTCATGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp CAATACTACCCAATGCCCTTCTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGGGAGTATGTGAGACTC +
Preference number: 3 (lower is better)
Translates to: QYYPMPFWMYAA*QPADSWEYVRL
Trigger: GAGTCTCACATACTCCCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGCATTGGGTAGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 3 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR TCA 72 bp CTCTCAAGAGACCTGTGCTCTTTTATAGGTCAACAATaGTCATCCAAGCCCACACGTTCTCAAAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: LSRDLCSFIGQQ*SSKPTRSQSLG
Trigger: CCCCAGGCTTTGAGAACGTGTGGGCTTGGATGATCATTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp TCTGTACTTTCATCATCTTGTCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGTACTCAGCTAGTGGGC +
Preference number: 3 (lower is better)
Translates to: SVLSSSCPAGQR*MEKHQCTQLVG
Trigger: GCCCACTAGCTGAGTACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGGACAAGATGATGAAAGTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp GGCCATACTGAACCTCTTATTCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGCCCTCTGGAGGGACAT +
Preference number: 3 (lower is better)
Translates to: GHTEPLILLCAI*FTQQFCPLEGH
Trigger: ATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp ACCCTACATGCTGTCACGGTAAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAAGACAGGAAAAACTTG +
Preference number: 3 (lower is better)
Translates to: TLHAVTVNRQHK*LSVPRQDRKNL
Trigger: CAAGTTTTTCCTGTCTTGTCTGGGCACAGACAAGCACTTATGCTGACGGTTTACCGTGACAGCATGTAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp TTATCAGAAGCCAATAAATTACTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCTGTCACCGGGAACAGA +
Preference number: 3 (lower is better)
Translates to: LSEANKLLRNSG*TAIPRAVTGNR
Trigger: TCTGTTCCCGGTGACAGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAATTTATTGGCTTCTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp CCTGGTATCTCTCTTGCTTCCTCTCGTCATGTAATATaGTGGCTCCTCTTCTCTTCCACCAAGACCAAAAGC +
Preference number: 3 (lower is better)
Translates to: PGISLASSRHVI*WLLFSSTKTKS
Trigger: GCTTTTGGTCTTGGTGGAAGAGAAGAGGAGCCAGCATATTACATGACGAGAGGAAGCAAGAGAGATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp ATGATGGCTGCTGGGGCCATGGAAAAAGAGATTGACTaGGGAAGGCACATTACAGAGGCTTCTAGAATGACA +
Preference number: 3 (lower is better)
Translates to: MMAAGAMEKEID*GRHITEASRMT
Trigger: TGTCATTCTAGAAGCCTCTGTAATGTGCCTTCCCCAGTCAATCTCTTTTTCCATGGCCCCAGCAGCCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp GCAAACACTGAAGTTCCAGGATACTCCCTCTACTCTTaGCACTCTATCTCTGAGGACTTCATATCACGCCCT +
Preference number: 3 (lower is better)
Translates to: ANTEVPGYSLYS*HSISEDFISRP
Trigger: AGGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTATCCTGGAACTTCAGTGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp GAGCTGGATAGTCTAAGACAGACTCATCCATGTGTCTaGTGTAAGCAGGCTGTGAGCCAAGGTTTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: ELDSLRQTHPCV*CKQAVSQGFSS
Trigger: ACTTGAGAAACCTTGGCTCACAGCCTGCTTACACCAGACACATGGATGAGTCTGTCTTAGACTATCCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 3 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 3 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 3 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 3 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTATTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 3 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 3 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 3 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 3 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR GCA 72 bp TCATCCAGAGGCCATACTGAACCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAACAATTCTGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SSRGHTEPLILL*AICFTQQFCPL
Trigger: CAGAGGGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp TACCCTCATCCAGAGGCCATACTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTACCCAACAATTCTGCC +
Preference number: 3 (lower is better)
Translates to: YPHPEAILNLLF*SALYALPNNSA
Trigger: GGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGATGAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp GACCCACAAGTTCTCTGTACTTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGAAAAACACCAGTGTAC +
Preference number: 3 (lower is better)
Translates to: DPQVLCTFIILS*WAEVNGKTPVY
Trigger: GTACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGGACAAGATGATGAAAGTACAGAGAACTTGTGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp GGTATCTCTCTTGCTTCCTCTCGTCATGTAATATGCTaGCTCCTCTTCTCTTCCACCAAGACCAAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: GISLASSRHVIC*LLFSSTKTKSF
Trigger: GAAGCTTTTGGTCTTGGTGGAAGAGAAGAGGAGCCAGCATATTACATGACGAGAGGAAGCAAGAGAGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp CTTGAAGCAGCAAGTCACTTCTGTGACCCCTCCACATaGGTGCTCTGTATCAGCCTTTGTATAATCATCGTT +
Preference number: 3 (lower is better)
Translates to: LEAASHFCDPST*VLCISLCIIIV
Trigger: AACGATGATTATACAAAGGCTGATACAGAGCACCCATGTGGAGGGGTCACAGAAGTGACTTGCTGCTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 3 (lower is better)
Translates to: PRATNTQKLLLALTSSCVISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAACAGCAGCAGTCATTaGGCCAGGATTTTACCAAAT +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQNSSSH*ARILPN
Trigger: ATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 3 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGCTTCAGAGGTCAGCTaGAAGCAGCAAGTCACTGCA +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCASEVS*KQQVTA
Trigger: TGCAGTGACTTGCTGCTTCAAGCTGACCTCTGAAGC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAAAGAGAATAGAAAGTaGAGAGGAGGGGCAGTATTG +
Preference number: 3 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLKENRK*RGGAVL
Trigger: CAATACTGCCCCTCCTCTCAACTTTCTATTCTCTTT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp GGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTaGACGTGCACATGGACTGGGAAAGAACACATGACT +
Preference number: 3 (lower is better)
Translates to: GSDNVSCVRVYT*TCTWTGKEHMT
Trigger: AGTCATGTGTTCTTTCCCAGTCCATGTGCACGTGCACGTATATACACGAACACATGACACATTATCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR GCA 72 bp TGTTGGACTCAGTCACCGCCTAGTTGTGTGATCTCATaGAAACTACTCAATCCTTCCCATGGGGATAACAAA +
Preference number: 3 (lower is better)
Translates to: CWTQSPPSCVIS*KLLNPSHGDNK
Trigger: TTTGTTATCCCCATGGGAAGGATTGAGTAGTTTGCATGAGATCACACAACTAGGCGGTGACTGAGTCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR GCA 72 bp GAGAACTGGTTGCTTAAAAGAGCCTGGTATCTCTCTTaGTTCCTCTCGTCATGTAATATGCTGGCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: ENWLLKRAWYLS*FLSSCNMLAPL
Trigger: AAGAGGAGCCAGCATATTACATGACGAGAGGAAGCAAGAGAGATACCAGGCTCTTTTAAGCAACCAGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp AACAATGATCATCCAAGCCCACACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTGTGGGTTGTCAACCAA +
Preference number: 3 (lower is better)
Translates to: NNDHPSPHVLKA*GATIKLWVVNQ
Trigger: TTGGTTGACAACCCACAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTGTGGGCTTGGATGATCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp CCACAAGTTCTCTGTACTTTCATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAAACACCAGTGTACTCA +
Preference number: 3 (lower is better)
Translates to: PQVLCTFIILSC*AEVNGKTPVYS
Trigger: TGAGTACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGGACAAGATGATGAAAGTACAGAGAACTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp GGCACTTTCTCAGTAGCAATGCGTTCACATGAGAACTaGTTGCTTAAAAGAGCCTGGTATCTCTCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: GTFSVAMRSHEN*LLKRAWYLSCF
Trigger: GAAGCAAGAGAGATACCAGGCTCTTTTAAGCAACCAGTTCTCATGTGAACGCATTGCTACTGAGAAAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 3 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 3 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 3 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 3 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR TCA 72 bp AATCTTCTGTGGCCATCAAGTTTGCTATTGTCATTTTaGTCATGCAGGACACATGGACAAGCCCACTGTCAG +
Preference number: 3 (lower is better)
Translates to: NLLWPSSLLLSF*SCRTHGQAHCQ
Trigger: CTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTTGATGGCCACAGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR GCA 72 bp AGGCTATGTGAACTGTGTTCAGAAACTTTGACAACATaGACACTCACTCCTCTCAAAGTCAGTACCCAGGAT +
Preference number: 3 (lower is better)
Translates to: RLCELCSETLTT*TLTPLKVSTQD
Trigger: ATCCTGGGTACTGACTTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAGTTCACATAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp AAAAATTTTCAAGACCTGATTAAGTATTTCACCCTCTaGTCACCCAACAGCCAGGCTTCCTTGTCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: KNFQDLIKYFTL*SPNSQASLSPP
Trigger: AGGAGGAGACAAGGAAGCCTGGCTGTTGGGTGAGCAGAGGGTGAAATACTTAATCAGGTCTTGAAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp TGGGTATACCACCGTCTATTTGCAAATCATCTACCATaGAGAGACATTCCTAAACGTGGGCGATATGGTTTG +
Preference number: 3 (lower is better)
Translates to: WVYHRLFANHLP*RDIPKRGRYGL
Trigger: CAAACCATATCGCCCACGTTTAGGAATGTCTCTCCATGGTAGATGATTTGCAAATAGACGGTGGTATACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp GAAGTCCAGGCATGGCTGTTTACAAATGTTCAAACATaGTCTTGGGAAGCTCCTCTGTATCTTAGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: EVQAWLFTNVQT*SWEAPLYLSSS
Trigger: TGAAGAGCTAAGATACAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGTAAACAGCCATGCCTGGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp TCCCTTTCAAAACTAACTCCAATTCTATATCCTCTATaGAGCACCATCCACTGTCAGCAGCAGCCTCAATGT +
Preference number: 3 (lower is better)
Translates to: SLSKLTPILYPL*STIHCQQQPQC
Trigger: ACATTGAGGCTGCTGCTGACAGTGGATGGTGCTTCATAGAGGATATAGAATTGGAGTTAGTTTTGAAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR TCA 72 bp CACAGTAAAGCTTCACTCCGTAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGTCTGCTGCTTGACTTC +
Preference number: 3 (lower is better)
Translates to: HSKASLRKLKVF*IIMKMCLLLDF
Trigger: GAAGTCAAGCAGCAGACACATCTTCATAATGATTCAGAAGACCTTCAGCTTACGGAGTGAAGCTTTACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp AATCTTCTGTGGCCATCAAGTTTGCTATTGTCATTTTaGTCATGCAGGACACATGGACAAGCCCACTGCAAA +
Preference number: 3 (lower is better)
Translates to: NLLWPSSLLLSF*SCRTHGQAHCK
Trigger: TTTGCAGTGGGCTTGTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTTGATGGCCACAGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR GCA 72 bp CCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTaGTATTGTCATTTTGATCATGCAGGACACATGGAC +
Preference number: 3 (lower is better)
Translates to: PKHFSIFCGHQV*YCHFDHAGHMD
Trigger: GTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR CCA 72 bp CAGGCATGGCTGTTTACAAATGTTCAAACATGGTCTTaGGAAGCTCCTCTGTATCTTAGCTCTTCATTTCTC +
Preference number: 3 (lower is better)
Translates to: QAWLFTNVQTWS*EAPLYLSSSFL
Trigger: GAGAAATGAAGAGCTAAGATACAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGTAAACAGCCATGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CAA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 3 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCGTCAGCATAAGTGCTaGTCTGTGCCCAGACAAGAC +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIRQHKC*SVPRQD
Trigger: GTCTTGTCTGGGCACAGACAAGCACTTATGCTGACG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 3 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGGGAGAAGGTGTGGTTaGGATGGACTGCCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIGRRCG*DGLPWK
Trigger: TTTCCAAGGCAGTCCATCCAAACCACACCTTCTCCC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp TTAGATTCTCATAGGAGCATGAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGGTTGCACGCTCCTTAT +
Preference number: 3 (lower is better)
Translates to: LDSHRSMNPIVK*VCKGLRLHAPY
Trigger: ATAAGGAGCGTGCAACCTCAATCCCTTGCATACTCATTTCACAATAGGGTTCATGCTCCTATGAGAATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp CCAAACAAGAAGGGGCAAGCTGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTTTGTAGAAATGATATG +
Preference number: 3 (lower is better)
Translates to: PNKKGQADLMRL*STPELFCRNDM
Trigger: CATATCATTTCTACAAAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp TTCAAAATTTGCAATACCCTCATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTGCGCTATATGCTTTAC +
Preference number: 3 (lower is better)
Translates to: FKICNTLIQRPY*TSYSALRYMLY
Trigger: GTAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGATGAGGGTATTGCAAATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp ATTCTGCTCTGCGCTATATGCTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCTTTTAAGCACAATTTT +
Preference number: 3 (lower is better)
Translates to: ILLCAICFTQQF*PLEGHSFKHNF
Trigger: AAAATTGTGCTTAAAAGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CCA 72 bp CATGGAGAGACATTCCTAAACGTGGGCGATATGGTTTaGATATTTGTCTCCTCGAAGTCTCATGTTGAAATA +
Preference number: 3 (lower is better)
Translates to: HGETFLNVGDMV*IFVSSKSHVEI
Trigger: TATTTCAACATGAGACTTCGAGGAGACAAATATCCAAACCATATCGCCCACGTTTAGGAATGTCTCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp AAAGACGTGCAAACATATTTCCCTGCTTCCATGGAATaGGTATACCACCGTCTATTTGCAAATCATCTACCA +
Preference number: 3 (lower is better)
Translates to: KDVQTYFPASME*VYHRLFANHLP
Trigger: TGGTAGATGATTTGCAAATAGACGGTGGTATACCCATTCCATGGAAGCAGGGAAATATGTTTGCACGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp AAGTTTGCTATTGTCATTTTGATCATGCAGGACACATaGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACT +
Preference number: 3 (lower is better)
Translates to: KFAIVILIMQDT*TSPLSVEKKRT
Trigger: AGTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAAATGACAATAGCAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: PRATNTQKLLLALTSSCVCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: PRATNTQKLLLALTSSCVPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 3 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 3 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 3 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTTAGCATCATTCCCTaGGCATTACTCAACCCAGCA +
Preference number: 3 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFFSIIP*ALLNPA
Trigger: TGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 3 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATCTTCACTGCTCCATaGTTTTACTCCTCCCCCACC +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIIFTAP*FYSSPT
Trigger: GGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: WKILIVVTERSQSFREPQCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: WKILIVVTERSQSFREPQPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 3 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp GGGTCCCTGCCATTACTTATTGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGTAGTTGTGGATTTATA +
Preference number: 3 (lower is better)
Translates to: GSLPLLIVVITV*LLAVPCSCGFI
Trigger: TATAAATCCACAACTACAAGGAACAGCTAGTAATCAAACAGTGATGACCACAATAAGTAATGGCAGGGACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR GCA 72 bp GATAATGTGTCATGTGTTCGTGTATATACGTGCACGTaGACATGGACTGGGAAAGAACACATGACTATATTT +
Preference number: 3 (lower is better)
Translates to: DNVSCVRVYTCT*TWTGKEHMTIF
Trigger: AAATATAGTCATGTGTTCTTTCCCAGTCCATGTGCACGTGCACGTATATACACGAACACATGACACATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CCA 72 bp GGGCAAGTAAACTCAGTGAGGTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTTAGTTTCATATCATGT +
Preference number: 3 (lower is better)
Translates to: GQVNSVRLEEFV*GAFYVVSFISC
Trigger: ACATGATATGAAACTAACAACATAGAATGCCCCCCAAACAAATTCCTCTAACCTCACTGAGTTTACTTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTTAGCATCATTCCCTaGGCATTACTCAACCCAGCA +
Preference number: 3 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRFSIIP*ALLNPA
Trigger: TGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 3 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 3 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp TTTCCAATGCTGATGGAGAAAGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAGATGTTTTGCATACAT +
Preference number: 3 (lower is better)
Translates to: FPMLMEKGLNIC*PLDMEQMFCIH
Trigger: ATGTATGCAAAACATCTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCCTTTCTCCATCAGCATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp TCTGAGTCGTTTCCAGTCTTTAACTATTATAGGCAATaGTTCGGTGAACATGTCTTTTCATGTTTGTGCCAT +
Preference number: 3 (lower is better)
Translates to: SESFPVFNYYRQ*FGEHVFSCLCH
Trigger: ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAAGACTGGAAACGACTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 3 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGATATACCCCTATTTTaGCTAGACGCTTATGGCTTC +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIDIPLF*LDAYGF
Trigger: GAAGCCATAAGCGTCTAGCAAAAATAGGGGTATATC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR GCA 72 bp GTGTTGATTGTTCATAAACTAAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCATATCATACTTAACACC +
Preference number: 3 (lower is better)
Translates to: VLIVHKLNKWPN*PLRIFHIILNT
Trigger: GGTGTTAAGTATGATATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTTTAGTTTATGAACAATCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 3 (lower is better)
Translates to: SHLFVFSIIPLALLNPANKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SHLFVFSIIPLALLNPANFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 3 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 3 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 3 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 3 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 3 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 3 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCAAGACCTGTTAGACTaGGATTATACAAATTGGATG +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIQDLLD*DYTNWM
Trigger: CATCCAATTTGTATAATCCAAGTCTAACAGGTCTTG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGCTCTGTATCAGCCTTaGTATAATCATCGTTTAACT +
Preference number: 3 (lower is better)
Translates to: TVWIYSNITCSQTTFADIALYQP*YNHRLT
Trigger: AGTTAAACGATGATTATACAAAGGCTGATACAGAGC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
3UTR TCA 72 bp GAGCCATTTCTTAAAACTTTTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTTGACAACATGCACACT +
Preference number: 3 (lower is better)
Translates to: EPFLKTFANKAM*TVFRNFDNMHT
Trigger: AGTGTGCATGTTGTCAAAGTTTCTGAACACAGTTCACATAGCCTTATTAGCAAAAGTTTTAAGAAATGGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp GTAGTTAAGATGTACTGGCTCTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTAGGTTTGTTAACATTA +
Preference number: 3 (lower is better)
Translates to: VVKMYWLSTVSH*KGKNYVGLLTL
Trigger: TAATGTTAACAAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR TCA 72 bp CCAAAGGTCTCAATTAGATTTCCTCAGAAGCATACCTaGACTGTTAATCATTACAACTCCTTTGTGAAACAT +
Preference number: 3 (lower is better)
Translates to: PKVSIRFPQKHT*TVNHYNSFVKH
Trigger: ATGTTTCACAAAGGAGTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGGAAATCTAATTGAGACCTTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAGTGGTAATGGATTTGCACCGATCCATTCACCCACTCCCATTCAGTCCCTCTAGGCGCGGCTACGGCTaGGGAGACGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AVVMDLHRSIHPLPFSPSRRGYG*GDASGQ
Trigger: CTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCT...AGAGGGACTGAATGGGAGTGGGTGAATGGATCGGTGCAAATCCATTACCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451500.5
CDS-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGAGGCGCGGCTACGGCTaGGGAGACGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKRRGYG*GDASGQ
Trigger: CTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674172.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGGCCGTCTTTGGTTTTaGTCACGCGTCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPGRLWF*SRVTGA
Trigger: CGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLRRRE*AGRGQS
Trigger: GCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGTGAGGGGACACTTCTaGCCTGAGTCCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPVRGHF*PESRSL
Trigger: GAGTGAGCGGGACTCAGGGCAGAAGTGTCCCCTCAC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CATGAGAGTGAACCATGTTTAGGGTTCCAGGGTGGTTTCTCCAGCAGTGGTAATGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HESEPCLGFQGGFSSSGNGRNGL*QRNGSG
Trigger: TCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCC...ATTACCACTGCTGGAGAAACCACCCTGGAACCCTAAACATGGTTCACTCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451500.5
CDS-3UTR GCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGTGAGGGGACACTTCTaGCCTGAGTCCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTVRGHF*PESRSL
Trigger: GAGTGAGCGGGACTCAGGGCAGAAGTGTCCCCTCAC...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLRRRE*AGRGQS
Trigger: GCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDGRNGL*QRNGSG
Trigger: TCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTTATGGAATCTCGCATTaGGGCTGCCTGCACCGCACC +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTYGISH*GCLHRT
Trigger: GGTGCGGTGCAGGCAGCCGCAATGCGAGATTCCATA...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGGCGCGGCTACGGCTaGGGAGACGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFRRGYG*GDASGQ
Trigger: CTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307849.7
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAGGCGCGGCTACGGCTaGGGAGACGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVRRGYG*GDASGQ
Trigger: CTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAGGCGCGGCTACGGCTaGGGAGACGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCRRGYG*GDASGQ
Trigger: CTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAGATGGCTTGATGGCTaGTCCCTTCTAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPRWLDG*SLLGPS
Trigger: GGAAGGGCCTAGAAGGGAGCAGCCATCAAGCCATCT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAGACCTTGGGCAGGGGTaGCGAGAGAAGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PCSCGFISPRPLLLPACEDLGQG*REKGQK
Trigger: TTTCTGCCCCTTCTCTCGCCACCCCTGCCCAAGGTC...TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGACCTTGGGCAGGGGTaGCGAGAGAAGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQDLGQG*REKGQK
Trigger: TTTCTGCCCCTTCTCTCGCCACCCCTGCCCAAGGTC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQGRNGL*QRNGSG
Trigger: TCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGGGACACTTCTGCCCTaGGTCCCGCTCACTCACACG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQGTLLP*VPLTHT
Trigger: CGTGTGAGTGAGCGGGACTCAGGGCAGAAGTGTCCC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPWMYAA*QPADSW
Trigger: CCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTATGGAATCTCGCATTaGGGCTGCCTGCACCGCACC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNYGISH*GCLHRT
Trigger: GGTGCGGTGCAGGCAGCCGCAATGCGAGATTCCATA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp AGGTCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATGTGAGGGGACACTTCTaGCCTGAGTCCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RSSFKGSPRVPAITYCGHVRGHF*PESRSL
Trigger: GAGTGAGCGGGACTCAGGGCAGAAGTGTCCCCTCAC...ATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTACCCCTGTTGGAGCTaGTTAGTATTCCACGGGGTG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPYPCWS*LVFHGV
Trigger: CACCCCGTGGAATACTAAGCAGCTCCAACAGGGGTA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGGCCGTCTTTGGTTTTaGTCACGCGTCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQGRLWF*SRVTGA
Trigger: CGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLRRRE*AGRGQS
Trigger: GCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGGCCGTCTTTGGTTTTaGTCACGCGTCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPGRLWF*SRVLSP
Trigger: TGGAGATAGGACGCGTGACCAAAACCAAAGACGGCC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGGGACACTTCTGCCCTaGGTCCCGCTCACTCACACG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAGTLLP*VPLTHT
Trigger: CGTGTGAGTGAGCGGGACTCAGGGCAGAAGTGTCCC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTGGCACTCTATCTCTaGGGACTTCATATCACGCCC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLALYL*GLHITP
Trigger: GGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTCTCACTCATGTGACTaGAGTCAGCTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPSHSCD*SQLATQ
Trigger: CTGAGTTGCCAGCTGACTTCAGTCACATGAGTGAGA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTACAGGCTCCTCCTCTTaGTTAGAACTGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPTGSSS*LELFRA
Trigger: TGCCCTGAACAGTTCTAAGCAAGAGGAGGAGCCTGT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAGACCAAAAGCTTCCTaGGCCTCATCAGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPRPKAS*ASSEAE
Trigger: CTCAGCTTCTGATGAGGCCCAGGAAGCTTTTGGTCT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAGTAGGTCAGCAATTTTaGCAGAGCTCAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLVGQQF*QSSVLS
Trigger: GGACAGCACTGAGCTCTGCCAAAATTGCTGACCTAC...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGGAGAAGGTGTGGTTTaGATGGACTGCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPGEGVV*MDCLGK
Trigger: CTTTCCAAGGCAGTCCATCCAAACCACACCTTCTCC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp ACAAGTGGCCTGTGTATACTCGCTTCAGAGGTCAGCTaGAAGCAGCAAGTCACTTCTGTGACCCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TSGLCILASEVS*KQQVTSVTPPH
Trigger: ATGTGGAGGGGTCACAGAAGTGACTTGCTGCTTCAAGCTGACCTCTGAAGCGAGTATACACAGGCCACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKGRNGL*QRNGSG
Trigger: TCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGGGACACTTCTGCCCTaGGTCCCGCTCACTCACACG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFGTLLP*VPLTHT
Trigger: CGTGTGAGTGAGCGGGACTCAGGGCAGAAGTGTCCC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCCAAGGTTTCTCAAGTaGCCTCTCATCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNPRFLK*PLILQQ
Trigger: CTGCTGGAGGATGAGAGGTCACTTGAGAAACCTTGG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGGTGTAAGCAGGCTGTaGGCCAAGGTTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQGVSRL*AKVSQV
Trigger: CACTTGAGAAACCTTGGCTCACAGCCTGCTTACACC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTGTTCTCACTCATGTaGCTGAAGTCAGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLFSLM*LKSAGN
Trigger: GTTGCCAGCTGACTTCAGTCACATGAGTGAGAACAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCTGAATGTCACTCTTaGGGCTTTCAGTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPAECHS*GFQSCI
Trigger: GATGCAAGACTGAAAGCCTCAAGAGTGACATTCAGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAGCCTCCAGCTCTTCTaGTTACTTTCCCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPSLQLF*LLSPRK
Trigger: TTTCCTTGGGGAAAGTAATCAGAAGAGCTGGAGGCT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCCACCCTTCCCCCTTaGATGTCTTCCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPTLPP*MSSSSL
Trigger: AAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTCTTCCTGTGTGTTTaGTTCCATTGCCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPFFLCV*FHCPTL
Trigger: AAGGGTGGGGCAATGGAATCAAACACACAGGAAGAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLWMYAA*QPADSW
Trigger: CCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAGGCGCGGCTACGGCTaGGGAGACGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLRRGYG*GDASGQ
Trigger: CTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGGCCGTCTTTGGTTTTaGTCACGCGTCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCGRLWF*SRVTGA
Trigger: CGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCACG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLHGRL*FWSRVT
Trigger: CGTGACGCGTGACCAAAACCAAAGACGGCCATGAAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSALRRRE*AGRGQS
Trigger: GCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAG...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLRRRE*AGRGQS
Trigger: GCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLHGRL*FWSRVL
Trigger: TAGGACGCGTGACCAAAACCAAAGACGGCCATGAAG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674172.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTGTGACCCCTCCACATaGGTGCTCTGTATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLCDPST*VLCISL
Trigger: AAGGCTGATACAGAGCACCCATGTGGAGGGGTCACA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGAGGCACTAGAGTTATaGTCTGGCTTAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPEALEL*SGLAAL
Trigger: AAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCAACCAGCAGACAGCTaGGAGTATGTGAGACTCACC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQQPADS*EYVRLT
Trigger: GGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp CATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAACACCATTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: HCFCQHVKTGVP*IQGQCEHHFPL
Trigger: CAGTGGGAAATGGTGTTCACACTGGCCCTGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGGGACACTTCTGCCCTaGGTCCCGCTCACTCACACG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFGTLLP*VPLTHT
Trigger: CGTGTGAGTGAGCGGGACTCAGGGCAGAAGTGTCCC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 4 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTGGCACTCTATCTCTaGGGACTTCATATCACGCCC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLALYL*GLHITP
Trigger: GGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTGACCTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLTCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGGTCAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGGTGTAAGCAGGCTGTaGGCCAAGGTTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDGVSRL*AKVSQV
Trigger: CACTTGAGAAACCTTGGCTCACAGCCTGCTTACACC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTATGGAATCTCGCATTaGGGCTGCCTGCACCGCACC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAYGISH*GCLHRT
Trigger: GGTGCGGTGCAGGCAGCCGCAATGCGAGATTCCATA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGTGAGGGGACACTTCTaGCCTGAGTCCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKVRGHF*PESRSL
Trigger: GAGTGAGCGGGACTCAGGGCAGAAGTGTCCCCTCAC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTTGGCAGAGCTCAGTaGTGTCCTTCTGTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKFGRAQ*CPSVVL
Trigger: GAGAACAACAGAAGGACAGCACTGAGCTCTGCCAAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCAGGACCCCATCTCCTaGAGTAGCCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAQDPIS*SSLQLF
Trigger: GAAGAGCTGGAGGCTACTGCAGGAGATGGGGTCCTG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCACCTGGCTTGCAACTaGCCTCCCAAATTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNHLACN*PPKFRC
Trigger: ACACCTAAATTTGGGAGGGCAGTTGCAAGCCAGGTG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAAGTATTTCACCCTCTaGTCACCCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLKYFTL*SPNSQA
Trigger: AGCCTGGCTGTTGGGTGAGCAGAGGGTGAAATACTT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGGCCGTCTTTGGTTTTaGTCACGCGTCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQGRLWF*SRVTGA
Trigger: CGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGACCTTGGGCAGGGGTaGCGAGAGAAGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFDLGQG*REKGQK
Trigger: TTTCTGCCCCTTCTCTCGCCACCCCTGCCCAAGGTC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGACCTTGGGCAGGGGTaGCGAGAGAAGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFDLGQG*REKGQK
Trigger: TTTCTGCCCCTTCTCTCGCCACCCCTGCCCAAGGTC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307849.7
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGACCTTGGGCAGGGGTaGCGAGAGAAGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCDLGQG*REKGQK
Trigger: TTTCTGCCCCTTCTCTCGCCACCCCTGCCCAAGGTC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADILRRRE*AGRGQS
Trigger: GCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGGTCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATGGCCGTCTTTGGTTTTaGTCACGCGTCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: RSSFKGSPRVPAITYCGHGRLWF*SRVLSP
Trigger: TGGAGATAGGACGCGTGACCAAAACCAAAGACGGCC...ATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp CATGAGAGTGAACCATGTTTAGGGTTCCAGGGTGGTTTCTCCAGCAGTGGTAATCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: HESEPCLGFQGGFSSSGNLHGRL*FWSRVL
Trigger: TAGGACGCGTGACCAAAACCAAAGACGGCCATGAAG...ATTACCACTGCTGGAGAAACCACCCTGGAACCCTAAACATGGTTCACTCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451500.5
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLHGRL*FWSRVL
Trigger: TAGGACGCGTGACCAAAACCAAAGACGGCCATGAAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGACTCATCCATGTGTCTaGTGTAAGCAGGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQTHPCV*CKQAVS
Trigger: GCTCACAGCCTGCTTACACCAGACACATGGATGAGT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGTGACTGAAGTCAGCTaGCAACTCAGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQVTEVS*QLSWSW
Trigger: CCAGCTCCAGCTGAGTTGCCAGCTGACTTCAGTCAC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCCAAAGGAATTCATATaGACACCAATCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPPKEFI*TPICPA
Trigger: TGCTGGGCAGATTGGTGTCCATATGAATTCCTTTGG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGAGAAGGTGTGGTTTaGATGGACTGCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGEGVV*MDCLGK
Trigger: CTTTCCAAGGCAGTCCATCCAAACCACACCTTCTCC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACATCTGGGAGAAGGTGTaGTTTGGATGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNIWEKV*FGWTAL
Trigger: CAAGGCAGTCCATCCAAACCACACCTTCTCCCAGAT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp CTGCTCTCAAACTCAATATACATCTTCACTGCTCCATaGTTTTACTCCTCCCCCACCTGGCTTGCAACTGCC +
Preference number: 4 (lower is better)
Translates to: LLSNSIYIFTAP*FYSSPTWLATA
Trigger: GGCAGTTGCAAGCCAGGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGATGTATATTGAGTTTGAGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSAGRNGL*QRNGSG
Trigger: TCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCC...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCGGGACACTTCTGCCCTaGGTCCCGCTCACTCACACG +
Preference number: 4 (lower is better)
Translates to: ILLFMELFFCSLCAPLFCGTLLP*VPLTHT
Trigger: CGTGTGAGTGAGCGGGACTCAGGGCAGAAGTGTCCC...GCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCCAAGGTTTCTCAAGTaGCCTCTCATCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQPRFLK*PLILQQ
Trigger: CTGCTGGAGGATGAGAGGTCACTTGAGAAACCTTGG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAGCCTCCAGCTCTTCTaGTTACTTTCCCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSLQLF*LLSPRK
Trigger: TTTCCTTGGGGAAAGTAATCAGAAGAGCTGGAGGCT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCCCACCCTTCCCCCTTaGATGTCTTCCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQPTLPP*MSSSSL
Trigger: AAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTCTTCCTGTGTGTTTaGTTCCATTGCCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFFLCV*FHCPTL
Trigger: AAGGGTGGGGCAATGGAATCAAACACACAGGAAGAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTACCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGCCTGGTATCTCTCTTaGTTCCTCTCGTCATGTAAT +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKAWYLS*FLSSCN
Trigger: ATTACATGACGAGAGGAAGCAAGAGAGATACCAGGC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCACATGAGAACTGGTTaGTTAAAAGAGCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPHMRTG*LKEPGI
Trigger: GATACCAGGCTCTTTTAAGCAACCAGTTCTCATGTG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAGATGGCTTGATGGCTaGTCCCTTCTAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFARWLDG*SLLGPS
Trigger: GGAAGGGCCTAGAAGGGAGCAGCCATCAAGCCATCT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCAGGACCCCATCTCCTaGAGTAGCCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVQDPIS*SSLQLF
Trigger: GAAGAGCTGGAGGCTACTGCAGGAGATGGGGTCCTG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCGGCCGTCTTTGGTTTTaGTCACGCGTCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: ILLFMELFFCSLCAPLFCGRLWF*SRVTGA
Trigger: CGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCC...GCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307834.9
CDS-3UTR CCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCACG +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFLHGRL*FWSRVT
Trigger: CGTGACGCGTGACCAAAACCAAAGACGGCCATGAAG...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307834.9
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCACG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLHGRL*FWSRVT
Trigger: CGTGACGCGTGACCAAAACCAAAGACGGCCATGAAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGTGGTAATGGATTTGCACCGATCCATTCACCCACTCCCATTCAGTCCCTCTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: AVVMDLHRSIHPLPFSPSLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AGAGGGACTGAATGGGAGTGGGTGAATGGATCGGTGCAAATCCATTACCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451500.5
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCGGCCGTCTTTGGTTTTaGTCACGCGTCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFGRLWF*SRVLSP
Trigger: TGGAGATAGGACGCGTGACCAAAACCAAAGACGGCC...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp AGGTCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: RSSFKGSPRVPAITYCGHLHGRL*FWSRVL
Trigger: TAGGACGCGTGACCAAAACCAAAGACGGCCATGAAG...ATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCGCCCAGCAGGTGAGTaGCGGGCGAGGGAGACTTAC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRRPAGE*RARETY
Trigger: GTAAGTCTCCCTCGCCCGCCACTCACCTGCTGGGCG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCACGTGCACATGGACTaGGAAAGAACACATGACTAT +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKHVHMD*ERTHDY
Trigger: ATAGTCATGTGTTCTTTCCCAGTCCATGTGCACGTG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTATTACTGTTTGTGTGGTaGTTAGGGAGAGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLLLFVW*LGRVSS
Trigger: ACTGGATACTCTCCCTAACCACCACACAAACAGTAA...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCGTCATGTAATATGCTaGCTCCTCTTCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQRHVIC*LLFSST
Trigger: GGTGGAAGAGAAGAGGAGCCAGCATATTACATGACG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGAGGCACTAGAGTTATaGTCTGGCTTAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNEALEL*SGLAAL
Trigger: AAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCAACCAGCAGACAGCTaGGAGTATGTGAGACTCACC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQQPADS*EYVRLT
Trigger: GGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGGGACACTTCTGCCCTaGGTCCCGCTCACTCACACG +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFGTLLP*VPLTHT
Trigger: CGTGTGAGTGAGCGGGACTCAGGGCAGAAGTGTCCC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTGGCTATGCGGATTCTaGATGCCAACCTTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQWLCGF*MPTLEY
Trigger: GTACTCCAAGGTTGGCATTCAGAATCCGCATAGCCA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCGGGGTGTCTTTACTTaGCAAGTAACTTACACTCTC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQRGVFT*QVTYTL
Trigger: GAGAGTGTAAGTTACTTGTCAAGTAAAGACACCCCG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTCTCACTCATGTGACTaGAGTCAGCTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQSHSCD*SQLATQ
Trigger: CTGAGTTGCCAGCTGACTTCAGTCACATGAGTGAGA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGATTCAGGGCCAGTGTaGACACCATTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFADSGPV*TPFPVP
Trigger: GGGTACAGGAAATGGTGTTCACACTGGCCCTGAATC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435931.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTTTGCTGGCATAACTaGGCAGCTGAATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFCWHN*AAECHS
Trigger: AGAGTGACATTCAGCTGCTCAGTTATGCCAGCAAAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCCCACCCTTCCCCCTTaGATGTCTTCCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAPTLPP*MSSSSL
Trigger: AAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGCAAGCGTACTAACTaGCCCGTTCTTTGGATAAAA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGKRTN*PVLWIK
Trigger: TTTTATCCAAAGAACGGGGCAGTTAGTACGCTTGCC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGATATGTGGAGTTCAATaGAGAAACACCTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKICGVQ*RNTSDG
Trigger: GCCATCAGAGGTGTTTCTGCATTGAACTCCACATAT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTCTGCAGGCTATGTCTaGATAATACTCTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSAGYV*IILSVH
Trigger: GTGAACGGAGAGTATTATGCAGACATAGCCTGCAGA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTAGGCCCTTCCTTATaGTCACGCAGGGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLGPSL*SRRALG
Trigger: ACCAAGTGCCCTGCGTGAGCATAAGGAAGGGCCTAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTAGGCCCTTCCTTATaGTCACGCAGGGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLGPSL*SRRALG
Trigger: ACCAAGTGCCCTGCGTGAGCATAAGGAAGGGCCTAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCAGGACCCCATCTCCTaGAGTAGCCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFQDPIS*SSLQLF
Trigger: GAAGAGCTGGAGGCTACTGCAGGAGATGGGGTCCTG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCACCTGGCTTGCAACTaGCCTCCCAAATTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQHLACN*PPKFRC
Trigger: ACACCTAAATTTGGGAGGGCAGTTGCAAGCCAGGTG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCACG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALHGRL*FWSRVT
Trigger: CGTGACGCGTGACCAAAACCAAAGACGGCCATGAAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: PCSCGFISPRPLLLPACENTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCGACCTTGGGCAGGGGTaGCGAGAGAAGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ILLFMELFFCSLCAPLFCDLGQG*REKGQK
Trigger: TTTCTGCCCCTTCTCTCGCCACCCCTGCCCAAGGTC...GCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGGCCGTCTTTGGTTTTaGTCACGCGTCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAGRLWF*SRVLSP
Trigger: TGGAGATAGGACGCGTGACCAAAACCAAAGACGGCC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGATCAGTATCAATTCTaGCCTGCTAGGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLDQYQF*PARNRN
Trigger: GTTCCTGTTCCTAGCAGGCCAGAATTGATACTGATC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFASSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp GTTCCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VPCSCGFISPRP*LLPACENWCSL
Trigger: AAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
3UTR CAA 72 bp CTACATGCTGTCACGGTAAACCGTCAGCATAAGTGCTaGTCTGTGCCCAGACAAGACAGGAAAAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: LHAVTVNRQHKC*SVPRQDRKNLV
Trigger: AACCAAGTTTTTCCTGTCTTGTCTGGGCACAGACAAGCACTTATGCTGACGGTTTACCGTGACAGCATGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PCSCGFISPRPLLLPACEVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCAAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SPRPLLLPACENWCSLDSNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR TCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTCTTTACGTGGAAGATaGAGGGTGGTTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQSLRGR*RVVSLS
Trigger: ACTTAGAGAAACCACCCTTCATCTTCCACGTAAAGA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGGCCAGAGGATCACTTaGGCCCAGGAGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLGQRIT*AQEFKA
Trigger: GGCCTTGAACTCCTGGGCTCAAGTGATCCTCTGGCC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTTCAGAGGTCAGCTTaGAGCAGCAAGTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALQRSA*SSKSLL
Trigger: CAGAAGTGACTTGCTGCTTCAAGCTGACCTCTGAAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAGGTTTCAGTACGTGTaGGATGTCAGGGTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQRFQYV*DVRVSE
Trigger: CTCACTAACCCTGACATCTCACACGTACTGAAACCT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAAGAGAATAGAAAGTTaGGAGGAGGGGCAGTATTGT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQKRIES*EEGQYC
Trigger: ACAATACTGCCCCTCCTCTCAACTTTCTATTCTCTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTTTCAAGAGATGGCTTaGTGGCTGCTCCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAFQEMA*WLLPSR
Trigger: CCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAAA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCCCACCCTTCCCCCTTaGATGTCTTCCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFPTLPP*MSSSSL
Trigger: AAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTCTTCCTGTGTGTTTaGTTCCATTGCCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQFFLCV*FHCPTL
Trigger: AAGGGTGGGGCAATGGAATCAAACACACAGGAAGAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGGTGGTATAAAATTTaGAGGCCTTCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNWWYKI*RPSSCV
Trigger: CACACAGGAAGAAGGCCTTCAAATTTTATACCACCA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCWMYAA*QPADSW
Trigger: CCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCA...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGTGAGGGGACACTTCTaGCCTGAGTCCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRVRGHF*PESRSL
Trigger: GAGTGAGCGGGACTCAGGGCAGAAGTGTCCCCTCAC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGTGAGGGGACACTTCTaGCCTGAGTCCCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIVRGHF*PESRSL
Trigger: GAGTGAGCGGGACTCAGGGCAGAAGTGTCCCCTCAC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGAGACTGGTCTCTGGTaGCAAAAAGGTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFETGLW*QKGWGP
Trigger: TGGTCCCCAACCTTTTTGGCACCAGAGACCAGTCTC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTTCATATCACGCCCTaGCACAGGCTCCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLHITP*HRLLLL
Trigger: CAAGAGGAGGAGCCTGTGGCAGGGCGTGATATGAAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGTTGGAGTGCAGAGGTaGAATCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVVGVQR*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCTCTGCACTCCAAC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATACCCCTGTTGGAGCTaGTTAGTATTCCACGGGGTG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKYPCWS*LVFHGV
Trigger: CACCCCGTGGAATACTAAGCAGCTCCAACAGGGGTA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCAGGACCCCATCTCCTaGAGTAGCCTCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANQDPIS*SSLQLF
Trigger: GAAGAGCTGGAGGCTACTGCAGGAGATGGGGTCCTG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTTCTCTCTGTGCCAATaGACCACCCCAGAATCAAGC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAFSLCQ*TTPESS
Trigger: GCTTGATTCTGGGGTGGTGCATTGGCACAGAGAGAA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCACCTGGCTTGCAACTaGCCTCCCAAATTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCHLACN*PPKFRC
Trigger: ACACCTAAATTTGGGAGGGCAGTTGCAAGCCAGGTG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCCCTTCTGGATGTATaGTGCATGACAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAALLDV*CMTTSR
Trigger: TCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGGTCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: RSSFKGSPRVPAITYCGHPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...ATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALHGRL*FWSRVL
Trigger: TAGGACGCGTGACCAAAACCAAAGACGGCCATGAAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307849.7
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATTACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTACAAATGTTCAAACATaGTCTTGGGAAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLTNVQT*SWEAPL
Trigger: CAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTGTGACCCCTCCACATaGGTGCTCTGTATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFCDPST*VLCISL
Trigger: AAGGCTGATACAGAGCACCCATGTGGAGGGGTCACA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACACTAGAGTTATGGTCTaGCTTAGCTGCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNTRVMV*LSCTFA
Trigger: TGCAAAAGTGCAGCTAAGCCAGACCATAACTCTAGT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAAAACAGCAAACTCATaGCACCAGTATGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQKTANS*HQYGQT
Trigger: TGTTTGGCCATACTGGTGCCATGAGTTTGCTGTTTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGAGGGCAGGCAAATCTaGGAGAAGGTGTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFEGRQI*EKVWFG
Trigger: TCCAAACCACACCTTCTCCCAGATTTGCCTGCCCTC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGATCATGCAGGACACATaGACAAGCCCACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQIMQDT*TSPLQT
Trigger: TGTTTGCAGTGGGCTTGTCCATGTGTCCTGCATGAT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR CAA 72 bp ATATGGTTTGGATATTTGTCTCCTCGAAGTCTCATGTaGAAATATGATCCCCGCTGTTGGAGACGGGGCCTA +
Preference number: 4 (lower is better)
Translates to: IWFGYLSPRSLM*KYDPRCWRRGL
Trigger: TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGACAAATATCCAAACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR TCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATCCAACATCACAGGTaGGGAGACAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFIQHHR*GDNEAR
Trigger: CCTGGCCTCATTGTCTCCTCACCTGTGATGTTGGAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACTTTATAGGTCAACAATaGTCATCCAAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDFIGQQ*SSKPTR
Trigger: ACGTGTGGGCTTGGATGATCATTGTTGACCTATAAA...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTGGCACTCTATCTCTaGGGACTTCATATCACGCCC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLALYL*GLHITP
Trigger: GGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTTTGGCACTCTATCTCTaGGGACTTCATATCACGCCC +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLALYL*GLHITP
Trigger: GGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAA...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTGCTATTGTCATTTTaGTCATGCAGGACACATGGA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLLLSF*SCRTHG
Trigger: TCCATGTGTCCTGCATGATCAAAATGACAATAGCAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTCTCACTCATGTGACTaGAGTCAGCTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSHSCD*SQLATQ
Trigger: CTGAGTTGCCAGCTGACTTCAGTCACATGAGTGAGA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTTCAGAGGTCAGCTTaGAGCAGCAAGTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLQRSA*SSKSLL
Trigger: CAGAAGTGACTTGCTGCTTCAAGCTGACCTCTGAAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTTCAAGAGATGGCTTaGTGGCTGCTCCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKFQEMA*WLLPSR
Trigger: CCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTTCAGAGGTCAGCTTaGAGCAGCAAGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLQRSA*SSKSLQ
Trigger: TTGCAGTGACTTGCTGCTTCAAGCTGACCTCTGAAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGCCCACTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFAHCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGGGC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCGGCAAGCGTACTAACTaGCCCGTTCTTTGGATAAAA +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFGKRTN*PVLWIK
Trigger: TTTTATCCAAAGAACGGGGCAGTTAGTACGCTTGCC...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTCCGCAACTCTGGGTaGACAGCAATTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLRNSG*TAIPRA
Trigger: AGCCCTTGGAATTGCTGTGCACCCAGAGTTGCGGAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTATGCGGATTCTGAATaGCAACCTTGGAGTACAAAA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQYADSE*QPWSTK
Trigger: TTTTGTACTCCAAGGTTGGCATTCAGAATCCGCATA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGTTCGTGTATATACGTaGACGTGCACATGGACTGGG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFVRVYT*TCTWTG
Trigger: CCCAGTCCATGTGCACGTGCACGTATATACACGAAC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACATACCACCGTCTATTTaGAAATCATCTACCATGGAG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNIPPSI*KSSTME
Trigger: CTCCATGGTAGATGATTTGCAAATAGACGGTGGTAT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCAAACATATTTCCCTaGTTCCATGGAATGGGTATA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQANIFP*FHGMGI
Trigger: TATACCCATTCCATGGAAGCAGGGAAATATGTTTGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTGTGGCCATCAAGTTTaGTATTGTCATTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPCGHQV*YCHFDH
Trigger: ATGATCAAAATGACAATAGCAAACTTGATGGCCACA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACCCCTCCACATGGGTaGTCTGTATCAGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTPPHG*SVSAFV
Trigger: TACAAAGGCTGATACAGAGCACCCATGTGGAGGGGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTACCCCTCCACATGGGTaGTCTGTATCAGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVTPPHG*SVSAFV
Trigger: TACAAAGGCTGATACAGAGCACCCATGTGGAGGGGT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTCTCTCTGTGCCAATaGACCACCCCAGAATCAAGC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFSLCQ*TTPESS
Trigger: GCTTGATTCTGGGGTGGTGCATTGGCACAGAGAGAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGCCCTTCTGGATGTATaGTGCATGACAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVALLDV*CMTTSR
Trigger: TCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAGTATTTCACCCTCTaGTCACCCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKYFTL*SPNSQA
Trigger: AGCCTGGCTGTTGGGTGAGCAGAGGGTGAAATACTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCACG +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLHGRL*FWSRVT
Trigger: CGTGACGCGTGACCAAAACCAAAGACGGCCATGAAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGGCCGTCTTTGGTTTTaGTCACGCGTCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQGRLWF*SRVLSP
Trigger: TGGAGATAGGACGCGTGACCAAAACCAAAGACGGCC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGGCCGTCTTTGGTTTTaGTCACGCGTCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFGRLWF*SRVLSP
Trigger: TGGAGATAGGACGCGTGACCAAAACCAAAGACGGCC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGTGAAACATGGGACTaGTTGATTACCCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNCETWD*LITQCN
Trigger: ATTACACTGGGTAATCAACCAGTCCCATGTTTCACA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTGTGAAACATGGGACTaGTTGATTACCCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLCETWD*LITQCN
Trigger: ATTACACTGGGTAATCAACCAGTCCCATGTTTCACA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYLLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTACGTGCACGTGCACATaGACTGGGAAAGAACACATG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVTCTCT*TGKEHM
Trigger: CATGTGTTCTTTCCCAGTCCATGTGCACGTGCACGT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTTTTACTGTTTGTGTaGTGGTTAGGGAGAGTATCC +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNFLLFV*WLGRVS
Trigger: GGATACTCTCCCTAACCACCACACAAACAGTAAAAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCTTTTCAATCTTCTGTaGCCATCAAGTTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLFNLL*PSSLLL
Trigger: CAATAGCAAACTTGATGGCCACAGAAGATTGAAAAG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAACTCATCCATGTGTCTaGTGTAAGCAGGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKTHPCV*CKQAVS
Trigger: GCTCACAGCCTGCTTACACCAGACACATGGATGAGT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGTGACTGAAGTCAGCTaGCAACTCAGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANVTEVS*QLSWSW
Trigger: CCAGCTCCAGCTGAGTTGCCAGCTGACTTCAGTCAC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTGTTTCACAATTGCCTaGTCTTTACATCTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPCFTIA*SLHLLN
Trigger: ATTTAGGAGATGTAAAGACCAGGCAATTGTGAAACA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGAGGCACTAGAGTTATaGTCTGGCTTAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCEALEL*SGLAAL
Trigger: AAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTATCTGGGAGAAGGTGTaGTTTGGATGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFIWEKV*FGWTAL
Trigger: CAAGGCAGTCCATCCAAACCACACCTTCTCCCAGAT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTATCTGGGAGAAGGTGTaGTTTGGATGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFIWEKV*FGWTAL
Trigger: CAAGGCAGTCCATCCAAACCACACCTTCTCCCAGAT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACAACCAGCAGACAGCTaGGAGTATGTGAGACTCACC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQQPADS*EYVRLT
Trigger: GGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp CCATCCACTGTCAGCAGCAGCCTCAATGTTTCACTATaGCTCAACTGTAATAGTATAGGCTTTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PSTVSSSLNVSL*LNCNSIGFGVL
Trigger: CAACACACCAAAGCCTATACTATTACAGTTGAGCAATAGTGAAACATTGAGGCTGCTGCTGACAGTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
3UTR CAA 72 bp TCCCTGCTTCCATGGAATGGGTATACCACCGTCTATTaGCAAATCATCTACCATGGAGAGACATTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: SLLPWNGYTTVY*QIIYHGETFLN
Trigger: GTTTAGGAATGTCTCTCCATGGTAGATGATTTGCAAATAGACGGTGGTATACCCATTCCATGGAAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGATTCAGGGCCAGTGTaGACACCATTTCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANDSGPV*TPFPTG
Trigger: ACCAGTGGGAAATGGTGTTCACACTGGCCCTGAATC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTGGCACTCTATCTCTaGGGACTTCATATCACGCCC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLALYL*GLHITP
Trigger: GGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGGTGTAAGCAGGCTGTaGGCCAAGGTTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANGVSRL*AKVSQV
Trigger: CACTTGAGAAACCTTGGCTCACAGCCTGCTTACACC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGCTGAATGTCACTCTTaGGGCTTTCAGTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKAECHS*GFQSCI
Trigger: GATGCAAGACTGAAAGCCTCAAGAGTGACATTCAGC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGCTGAATGTCACTCTTaGGGCTTTCAGTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFAECHS*GFQSCI
Trigger: GATGCAAGACTGAAAGCCTCAAGAGTGACATTCAGC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQKLKVF*IIMKMC
Trigger: ACACATCTTCATAATGATTCAGAAGACCTTCAGCTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAGGTTTCAGTACGTGTaGGATGTCAGGGTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVRFQYV*DVRVSE
Trigger: CTCACTAACCCTGACATCTCACACGTACTGAAACCT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTTCAAGAGATGGCTTaGTGGCTGCTCCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQFQEMA*WLLPSR
Trigger: CCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTGTATTAGATTGGGTTTaGGTCTATTTGACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLVLDWV*VYLTEL
Trigger: TAGCTCTGTCAAATAGACTCAAACCCAATCTAATAC...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGCCTCCAGCTCTTCTaGTTACTTTCCCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSLQLF*LLSPRK
Trigger: TTTCCTTGGGGAAAGTAATCAGAAGAGCTGGAGGCT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTCTTCCTGTGTGTTTaGTTCCATTGCCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFFLCV*FHCPTL
Trigger: AAGGGTGGGGCAATGGAATCAAACACACAGGAAGAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAACAGCTGGGAGTATGTaGGACTCACCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKTAGSM*DSPHFP
Trigger: TGGAAAATGTGGTGAGTCTCACATACTCCCAGCTGT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACAGCTGGGAGTATGTaGGACTCACCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTAGSM*DSPHFP
Trigger: TGGAAAATGTGGTGAGTCTCACATACTCCCAGCTGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTGCTGACATCTCACTaGAATCTAATGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLLTSH*NLMMWK
Trigger: TTTCCACATCATTAGATTTCAGTGAGATGTCAGCAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGTCACTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSHCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGACT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTTCAGAGGTCAGCTTaGAGCAGCAAGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLQRSA*SSKSLQ
Trigger: TTGCAGTGACTTGCTGCTTCAAGCTGACCTCTGAAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTCTCCGAGGGTCCCTaGCATTACTTATTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLSEGP*HYLLWS
Trigger: TGACCACAATAAGTAATGGCAGGGACCCTCGGAGAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR GCA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKNRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVNRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFNRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTCCAATGTGCCCTCTaGCTGGCCCTAAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFFQCAL*LALSKP
Trigger: TGGCTTGCTTAGGGCCAGGCAGAGGGCACATTGGAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAACAGGCTCCTCCTCTTaGTTAGAACTGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQTGSSS*LELFRA
Trigger: TGCCCTGAACAGTTCTAAGCAAGAGGAGGAGCCTGT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTACAGGCTCCTCCTCTTaGTTAGAACTGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFTGSSS*LELFRA
Trigger: TGCCCTGAACAGTTCTAAGCAAGAGGAGGAGCCTGT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTTGGCAGAGCTCAGTaGTGTCCTTCTGTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFGRAQ*CPSVVL
Trigger: GAGAACAACAGAAGGACAGCACTGAGCTCTGCCAAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTCTGCAGGCTATGTCTaGATAATACTCTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCSAGYV*IILSVH
Trigger: GTGAACGGAGAGTATTATGCAGACATAGCCTGCAGA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTAGGCCCTTCCTTATaGTCACGCAGGGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLGPSL*SRRALG
Trigger: ACCAAGTGCCCTGCGTGAGCATAAGGAAGGGCCTAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAGATGGCTTGATGGCTaGTCCCTTCTAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFRWLDG*SLLGPS
Trigger: GGAAGGGCCTAGAAGGGAGCAGCCATCAAGCCATCT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAGATGGCTTGATGGCTaGTCCCTTCTAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLRWLDG*SLLGPS
Trigger: GGAAGGGCCTAGAAGGGAGCAGCCATCAAGCCATCT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATCATCTTTCTTCTCTaGCAATTTCAAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQIIFLL*QFQEMA
Trigger: AGCCATCTCTTGAAATTGGCAGAGAAGAAAGATGAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTCTCTCTGTGCCAATaGACCACCCCAGAATCAAGC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQFSLCQ*TTPESS
Trigger: GCTTGATTCTGGGGTGGTGCATTGGCACAGAGAGAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCCCTTCTGGATGTATaGTGCATGACAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQALLDV*CMTTSR
Trigger: TCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAGTATTTCACCCTCTaGTCACCCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKYFTL*SPNSQA
Trigger: AGCCTGGCTGTTGGGTGAGCAGAGGGTGAAATACTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLHGRL*FWSRVL
Trigger: TAGGACGCGTGACCAAAACCAAAGACGGCCATGAAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307849.7
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATTAACCGGGCATGGTaGCTCCCCTCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIINRAW*LPSVVP
Trigger: TGGGACTACAGAGGGGAGCCACCATGCCCGGTTAAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCTTTTCAATCTTCTGTaGCCATCAAGTTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLFNLL*PSSLLL
Trigger: CAATAGCAAACTTGATGGCCACAGAAGATTGAAAAG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATTTATGTGGTCTCATaGCAGTCTCAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKIYVVS*QSQGSK
Trigger: CTTGGAGCCCTGAGACTGCCATGAGACCACATAAAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGTAGGTCAGCAATTTTaGCAGAGCTCAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQVGQQF*QSSVLS
Trigger: GGACAGCACTGAGCTCTGCCAAAATTGCTGACCTAC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGTAGGTCAGCAATTTTaGCAGAGCTCAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFVGQQF*QSSVLS
Trigger: GGACAGCACTGAGCTCTGCCAAAATTGCTGACCTAC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGGAGAAGGTGTGGTTTaGATGGACTGCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFGEGVV*MDCLGK
Trigger: CTTTCCAAGGCAGTCCATCCAAACCACACCTTCTCC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGAGGGCAGGCAAATCTaGGAGAAGGTGTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANEGRQI*EKVWFG
Trigger: TCCAAACCACACCTTCTCCCAGATTTGCCTGCCCTC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGCCAATTTCAAGAGATaGCTTGATGGCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFANFKR*LDGCSL
Trigger: AAGGGAGCAGCCATCAAGCCATCTCTTGAAATTGGC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTATCATGCAGGACACATaGACAAGCCCACTGCAAACA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFIMQDT*TSPLQT
Trigger: TGTTTGCAGTGGGCTTGTCCATGTGTCCTGCATGAT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
3UTR CAA 72 bp TCATTCATTAGCTCAAGATTCTGTAGGTCAGCAATTTaGGCAGAGCTCAGTGCTGTCCTTCTGTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SFISSRFCRSAI*AELSAVLLLFS
Trigger: TGAGAACAACAGAAGGACAGCACTGAGCTCTGCCAAAATTGCTGACCTACAGAATCTTGAGCTAATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFANPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTCTTTACGTGGAAGATaGAGGGTGGTTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFASLRGR*RVVSLS
Trigger: ACTTAGAGAAACCACCCTTCATCTTCCACGTAAAGA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCCTGCTGGGCAGAGGTaGATGGAAAAACACCAGTGT +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHPAGQR*MEKHQC
Trigger: ACACTGGTGTTTTTCCATTCACCTCTGCCCAGCAGG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTGGCACTCTATCTCTaGGGACTTCATATCACGCCC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLALYL*GLHITP
Trigger: GGGCGTGATATGAAGTCCTCAGAGATAGAGTGCCAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCCAAGGTTTCTCAAGTaGCCTCTCATCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHPRFLK*PLILQQ
Trigger: CTGCTGGAGGATGAGAGGTCACTTGAGAAACCTTGG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTGCTGGCATAACTaGGCAGCTGAATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVFCWHN*AAECHS
Trigger: AGAGTGACATTCAGCTGCTCAGTTATGCCAGCAAAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTTTGCTGGCATAACTaGGCAGCTGAATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKFCWHN*AAECHS
Trigger: AGAGTGACATTCAGCTGCTCAGTTATGCCAGCAAAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCTTCACTCCGTAAGCTaGAGGTCTTCTGAATCATTA +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCLHSVS*RSSESL
Trigger: TAATGATTCAGAAGACCTTCAGCTTACGGAGTGAAG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACCCTAATTTTGCCCTaGTCAGAGGCACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTLILP*SEALEL
Trigger: TAACTCTAGTGCCTCTGATCAGGGCAAAATTAGGGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAGGTTTCAGTACGTGTaGGATGTCAGGGTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQRFQYV*DVRVSE
Trigger: CTCACTAACCCTGACATCTCACACGTACTGAAACCT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAGCCTCCAGCTCTTCTaGTTACTTTCCCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFSLQLF*LLSPRK
Trigger: TTTCCTTGGGGAAAGTAATCAGAAGAGCTGGAGGCT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCAGTCTAGTCTTTGCTaGCTCATGACCTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFQSSLC*LMTSIV
Trigger: CACAATTGAGGTCATGAGTCAGCAAAGACTAGACTG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAACAGCTGGGAGTATGTaGGACTCACCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQTAGSM*DSPHFP
Trigger: TGGAAAATGTGGTGAGTCTCACATACTCCCAGCTGT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTGGATGTATGCTGCATaGCAACCAGCAGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRWMYAA*QPADSW
Trigger: CCAGCTGTCTGCTGGTTGTCATGCAGCATACATCCA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGCCCACTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFAHCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGGGC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCTTTTATCTGCTACTTTaGACGATCTCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFFYLLL*TISLHG
Trigger: GCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAA...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTTTATCTGCTACTTTaGACGATCTCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQFYLLL*TISLHG
Trigger: GCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCCCGGCCATTGCTTCTaGCAGCATGTGAAAACTGGT +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHPGHCF*QHVKTG
Trigger: ACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGGCAAGCGTACTAACTaGCCCGTTCTTTGGATAAAA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFGKRTN*PVLWIK
Trigger: TTTTATCCAAAGAACGGGGCAGTTAGTACGCTTGCC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGGCAAGCGTACTAACTaGCCCGTTCTTTGGATAAAA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKGKRTN*PVLWIK
Trigger: TTTTATCCAAAGAACGGGGCAGTTAGTACGCTTGCC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATCTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCNKWPN*PLRIFH
Trigger: ATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTT...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAACCGTCAGCATAAGTaGTTGTCTGTGCCCAGACAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNRQHK*LSVPRQ
Trigger: TTGTCTGGGCACAGACAAGCACTTATGCTGACGGTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAGACCCAACCCTACATaGTGTCACGGTAAACCGTCA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANRPNPT*CHGKPS
Trigger: TGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGAATTCCTTCCAATGTaGCCTCTGCCTGGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFEFLPM*PLPGPK
Trigger: CTTAGGGCCAGGCAGAGGGCACATTGGAAGGAATTC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATACAGGCTCCTCCTCTTaGTTAGAACTGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANTGSSS*LELFRA
Trigger: TGCCCTGAACAGTTCTAAGCAAGAGGAGGAGCCTGT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATCTCGTCATGTAATATaGTGGCTCCTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKSRHVI*WLLFSS
Trigger: GGAAGAGAAGAGGAGCCAGCATATTACATGACGAGA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGTGGCCATCAAGTTTaGTATTGTCATTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNCGHQV*YCHFDH
Trigger: ATGATCAAAATGACAATAGCAAACTTGATGGCCACA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTTGGCAGAGCTCAGTaGTGTCCTTCTGTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQFGRAQ*CPSVVL
Trigger: GAGAACAACAGAAGGACAGCACTGAGCTCTGCCAAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTACCCCTGTTGGAGCTaGTTAGTATTCCACGGGGTG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLYPCWS*LVFHGV
Trigger: CACCCCGTGGAATACTAAGCAGCTCCAACAGGGGTA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGCCCTTCTGGATGTATaGTGCATGACAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANALLDV*CMTTSR
Trigger: TCTGCTGGTTGTCATGCAGCATACATCCAGAAGGGC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAAGTATTTCACCCTCTaGTCACCCAACAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANKYFTL*SPNSQA
Trigger: AGCCTGGCTGTTGGGTGAGCAGAGGGTGAAATACTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCAGGAGACTGGTCTCTaGTGCCAAAAAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRQETGL*CQKGWG
Trigger: TCCCCAACCTTTTTGGCACCAGAGACCAGTCTCCTG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGATCAGTATCAATTCTaGCCTGCTAGGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFDQYQF*PARNRN
Trigger: GTTCCTGTTCCTAGCAGGCCAGAATTGATACTGATC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGATCAGTATCAATTCTaGCCTGCTAGGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKDQYQF*PARNRN
Trigger: GTTCCTGTTCCTAGCAGGCCAGAATTGATACTGATC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTCCTTTGTGAAACATaGGACTGGTTGATTACCCAG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLLCET*DWLITQ
Trigger: CTGGGTAATCAACCAGTCCCATGTTTCACAAAGGAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATTACTCCGCAACTCTaGGTGCACAGCAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFITPQL*VHSNSK
Trigger: CTTGGAATTGCTGTGCACCCAGAGTTGCGGAGTAAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAGTTCAAGGCCAGCCTaGGGCAACATGATGAAACCC +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFSSRPA*GNMMKP
Trigger: GGGTTTCATCATGTTGCCCCAGGCTGGCCTTGAACT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCGTTCACATGAGAACTaGTTGCTTAAAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFRSHEN*LLKRAW
Trigger: CCAGGCTCTTTTAAGCAACCAGTTCTCATGTGAACG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATGGATCCCTCGTGAATaGTTTGGCACTTTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKWIPRE*FGTFSV
Trigger: TACTGAGAAAGTGCCAAACCATTCACGAGGGATCCA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGTGGGCGATATGGTTTaGATATTTGTCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKVGDMV*IFVSSK
Trigger: CTTCGAGGAGACAAATATCCAAACCATATCGCCCAC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATTTCCCTGCTTCCATaGAATGGGTATACCACCGTC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFISLLP*NGYTTV
Trigger: GACGGTGGTATACCCATTCCATGGAAGCAGGGAAAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTCAGAAGTCCAGGCATaGCTGTTTACAAATGTTCAA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQSEVQA*LFTNVQ
Trigger: TTGAACATTTGTAAACAGCCATGCCTGGACTTCTGA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGTTTCACAATTGCCTaGTCTTTACATCTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNCFTIA*SLHLLN
Trigger: ATTTAGGAGATGTAAAGACCAGGCAATTGTGAAACA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCCAAAGGAATTCATATaGACACCAATCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFPKEFI*TPICPA
Trigger: TGCTGGGCAGATTGGTGTCCATATGAATTCCTTTGG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAAGGTGTGGTTTGGATaGACTGCCTTGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCKVWFG*TALERE
Trigger: TTCTCTTTCCAAGGCAGTCCATCCAAACCACACCTT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATATCTGGGAGAAGGTGTaGTTTGGATGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANIWEKV*FGWTAL
Trigger: CAAGGCAGTCCATCCAAACCACACCTTCTCCCAGAT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGAGGGCAGGCAAATCTaGGAGAAGGTGTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLEGRQI*EKVWFG
Trigger: TCCAAACCACACCTTCTCCCAGATTTGCCTGCCCTC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCCAATTTCAAGAGATaGCTTGATGGCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQANFKR*LDGCSL
Trigger: AAGGGAGCAGCCATCAAGCCATCTCTTGAAATTGGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCAACCAGCAGACAGCTaGGAGTATGTGAGACTCACC +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFQPADS*EYVRLT
Trigger: GGTGAGTCTCACATACTCCCAGCTGTCTGCTGGTTG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAACTGGTGTTCCCTTaGTTCAGGGCCAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKLVFP*FRASVN
Trigger: GTTCACACTGGCCCTGAATCAAGGGAACACCAGTTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFASGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAACCCTATTGTGAAATaGGTATGCAAGGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVNPIVK*VCKGLR
Trigger: CCTCAATCCCTTGCATACTCATTTCACAATAGGGTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTTATAGGTCAACAATaGTCATCCAAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFIGQQ*SSKPTR
Trigger: ACGTGTGGGCTTGGATGATCATTGTTGACCTATAAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCCCTTCAACAGAGGTTaGGACATATTGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLPFNRG*DILWGS
Trigger: AGACCCCCACAATATGTCTCAACCTCTGTTGAAGGG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTTTTCTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFFCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGAAAAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQKLKVF*IIMKMC
Trigger: ACACATCTTCATAATGATTCAGAAGACCTTCAGCTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTTCACTCCGTAAGCTaGAGGTCTTCTGAATCATTA +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLHSVS*RSSESL
Trigger: TAATGATTCAGAAGACCTTCAGCTTACGGAGTGAAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCTTCACTCCGTAAGCTaGAGGTCTTCTGAATCATTA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFLHSVS*RSSESL
Trigger: TAATGATTCAGAAGACCTTCAGCTTACGGAGTGAAG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAACCCTAATTTTGCCCTaGTCAGAGGCACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQTLILP*SEALEL
Trigger: TAACTCTAGTGCCTCTGATCAGGGCAAAATTAGGGT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAAAATCCCAAGCCCATaGCGAAACAAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAKIPSP*RNKQKC
Trigger: ACATTTCTGTTTGTTTCGTCATGGGCTTGGGATTTT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAGAGAATAGAAAGTTaGGAGGAGGGGCAGTATTGT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKRIES*EEGQYC
Trigger: ACAATACTGCCCCTCCTCTCAACTTTCTATTCTCTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTTCAAGAGATGGCTTaGTGGCTGCTCCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFQEMA*WLLPSR
Trigger: CCTAGAAGGGAGCAGCCATCAAGCCATCTCTTGAAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTGGTGGTATAAAATTTaGAGGCCTTCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFWWYKI*RPSSCV
Trigger: CACACAGGAAGAAGGCCTTCAAATTTTATACCACCA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTGGTGGTATAAAATTTaGAGGCCTTCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFWWYKI*RPSSCV
Trigger: CACACAGGAAGAAGGCCTTCAAATTTTATACCACCA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: ILLFMELFFCSLCAPLFCAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...GCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTTCTGTTCACTCTGTaGCCCTTTGTTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLLFTL*PFVLLS
Trigger: GGACAGCAGAACAAAGGGGCACAGAGTGAACAGAAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGGCAAGCGTACTAACTaGCCCGTTCTTTGGATAAAA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQGKRTN*PVLWIK
Trigger: TTTTATCCAAAGAACGGGGCAGTTAGTACGCTTGCC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGCTTCTCCTAGAACCTaGCCAAACAAGAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIASPRT*PNKKGQ
Trigger: TTGCCCCTTCTTGTTTGGGCAGGTTCTAGGAGAAGC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFNKWPN*PLRIFH
Trigger: ATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTCTGCAGGCTATGTCTaGATAATACTCTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFSAGYV*IILSVH
Trigger: GTGAACGGAGAGTATTATGCAGACATAGCCTGCAGA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFASKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACCTGCTTCCATGGAATaGGTATACCACCGTCTATTT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQPASME*VYHRLF
Trigger: AAATAGACGGTGGTATACCCATTCCATGGAAGCAGG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCACTCATCCATGTGTCTaGTGTAAGCAGGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLTHPCV*CKQAVS
Trigger: GCTCACAGCCTGCTTACACCAGACACATGGATGAGT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGTCAGAGACAGTGGTTaGTCATTTTCATTTGACTTC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAVRDSG*SFSFDF
Trigger: GAAGTCAAATGAAAATGACCAACCACTGTCTCTGAC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACCAAAGGAATTCATATaGACACCAATCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQPKEFI*TPICPA
Trigger: TGCTGGGCAGATTGGTGTCCATATGAATTCCTTTGG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTACTAGAGTTATGGTCTaGCTTAGCTGCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCTRVMV*LSCTFA
Trigger: TGCAAAAGTGCAGCTAAGCCAGACCATAACTCTAGT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTTTGCTAGACGCTTATaGCTTCCAATTTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFFARRL*LPIFPH
Trigger: GTGGGGAAAAATTGGAAGCCATAAGCGTCTAGCAAA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTTGCTAGACGCTTATaGCTTCCAATTTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKFARRL*LPIFPH
Trigger: GTGGGGAAAAATTGGAAGCCATAAGCGTCTAGCAAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAGGTGTGGTTTGGATaGACTGCCTTGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKVWFG*TALERE
Trigger: TTCTCTTTCCAAGGCAGTCCATCCAAACCACACCTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGGAGAAGGTGTGGTTTaGATGGACTGCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRGEGVV*MDCLGK
Trigger: CTTTCCAAGGCAGTCCATCCAAACCACACCTTCTCC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTGGGTTGGGTTCACTaGAATTTGGCACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLGWVH*NLALLN
Trigger: ATTCAGAAGTGCCAAATTTCAGTGAACCCAACCCAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCAAGAAGGGGCAAGCTaGTCTGATGAGACTTTGATC +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFQEGAS*SDETLI
Trigger: GATCAAAGTCTCATCAGATCAGCTTGCCCCTTCTTG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTTATAGGTCAACAATaGTCATCCAAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFFIGQQ*SSKPTR
Trigger: ACGTGTGGGCTTGGATGATCATTGTTGACCTATAAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCATCCAGAGGCCATACTaGACCTCTTATTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLIQRPY*TSYSAL
Trigger: CAGAGCAGAATAAGAGGTTCAGTATGGCCTCTGGAT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATTCTATATCCTCTATaGAGCACCATCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFILYPL*STIHCQ
Trigger: CTGACAGTGGATGGTGCTTCATAGAGGATATAGAAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTGCTATTGTCATTTTaGTCATGCAGGACACATGGA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLLLSF*SCRTHG
Trigger: TCCATGTGTCCTGCATGATCAAAATGACAATAGCAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTGTTCTCACTCATGTaGCTGAAGTCAGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLFSLM*LKSAGN
Trigger: GTTGCCAGCTGACTTCAGTCACATGAGTGAGAACAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATCTTCTGAATCATTATaGAGATGTGTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKSSESL*RCVCCL
Trigger: CAAGCAGCAGACACATCTTCATAATGATTCAGAAGA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTCTTCTGAATCATTATaGAGATGTGTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFSSESL*RCVCCL
Trigger: CAAGCAGCAGACACATCTTCATAATGATTCAGAAGA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTTCACTCCGTAAGCTaGAGGTCTTCTGAATCATTA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLHSVS*RSSESL
Trigger: TAATGATTCAGAAGACCTTCAGCTTACGGAGTGAAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAAATCCCAAGCCCATaGCGAAACAAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKIPSP*RNKQKC
Trigger: ACATTTCTGTTTGTTTCGTCATGGGCTTGGGATTTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAGGTTTCAGTACGTGTaGGATGTCAGGGTTAGTGAG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLRFQYV*DVRVSE
Trigger: CTCACTAACCCTGACATCTCACACGTACTGAAACCT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAGTATTGTAGCCATGTaGATAATGGGAACGTCATGT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFSIVAM*IMGTSC
Trigger: ACATGACGTTCCCATTATTCACATGGCTACAATACT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAAGAGAATAGAAAGTTaGGAGGAGGGGCAGTATTGT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQKRIES*EEGQYC
Trigger: ACAATACTGCCCCTCCTCTCAACTTTCTATTCTCTT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGTATTAGATTGGGTTTaGGTCTATTTGACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAVLDWV*VYLTEL
Trigger: TAGCTCTGTCAAATAGACTCAAACCCAATCTAATAC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCAGTCTAGTCTTTGCTaGCTCATGACCTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANQSSLC*LMTSIV
Trigger: CACAATTGAGGTCATGAGTCAGCAAAGACTAGACTG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTACAGCTGGGAGTATGTaGGACTCACCACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFTAGSM*DSPHFP
Trigger: TGGAAAATGTGGTGAGTCTCACATACTCCCAGCTGT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTTGCTGACATCTCACTaGAATCTAATGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCLLTSH*NLMMWK
Trigger: TTTCCACATCATTAGATTTCAGTGAGATGTCAGCAA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAGTCACTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFSHCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGTGACT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTTTTATCTGCTACTTTaGACGATCTCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFFYLLL*TISLHG
Trigger: GCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCTGCCCGTTTTATCTaGTACTTTGCACGATCTCAC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLAARFI*YFARSH
Trigger: GTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGAAACTTTGACAACATaGACACTCACTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVETLTT*TLTPLK
Trigger: TTTGAGAGGAGTGAGTGTGCATGTTGTCAAAGTTTC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGGCAAGCGTACTAACTaGCCCGTTCTTTGGATAAAA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANGKRTN*PVLWIK
Trigger: TTTTATCCAAAGAACGGGGCAGTTAGTACGCTTGCC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTCATCATCTTGTCCTaGTGGGCAGAGGTGAATGGA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFIILS*WAEVNG
Trigger: TCCATTCACCTCTGCCCAGCAGGACAAGATGATGAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGGAGATTATACAGTTTTaGATTTCCTCCATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTEIIQF*ISSISE
Trigger: TTCACTGATGGAGGAAATGCAAAACTGTATAATCTC...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTCAATTGTGACACCTaGTCTAGTTATGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLNCDT*SSYVLL
Trigger: GAGCAAAACATAACTAGAGCAGGTGTCACAATTGAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTCAATTGTGACACCTaGTCTAGTTATGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLNCDT*SSYVLL
Trigger: GAGCAAAACATAACTAGAGCAGGTGTCACAATTGAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGACATCCTTTCCACATaGATGCATACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRDILST*MHTLWS
Trigger: TGACCAGAGGGTATGCATCCATGTGGAAAGGATGTC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCCAGCATGTGAAAACTaGTGTTCCCTTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFPACEN*CSLDSG
Trigger: CCCTGAATCAAGGGAACACCAGTTTTCACATGCTGG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTGTGAAACATGGGACTaGTTGATTACCCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFCETWD*LITQCN
Trigger: ATTACACTGGGTAATCAACCAGTCCCATGTTTCACA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCACGTTCTCAAAGCCTaGGGAGCCACAATAAAATTG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANHVLKA*GATIKL
Trigger: CAATTTTATTGTGGCTCCCCAGGCTTTGAGAACGTG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTACTCCCTCTACTCTTaGCACTCTATCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIYSLYS*HSISED
Trigger: GTCCTCAGAGATAGAGTGCCAAGAGTAGAGGGAGTA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCATCATGCAGGACACATaGACAAGCCCACTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLIMQDT*TSPLSV
Trigger: TACTGACAGTGGGCTTGTCCATGTGTCCTGCATGAT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGATTTATGTGGTCTCATaGCAGTCTCAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRIYVVS*QSQGSK
Trigger: CTTGGAGCCCTGAGACTGCCATGAGACCACATAAAT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATATTTATGTGGTCTCATaGCAGTCTCAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHIYVVS*QSQGSK
Trigger: CTTGGAGCCCTGAGACTGCCATGAGACCACATAAAT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTACTAGAGTTATGGTCTaGCTTAGCTGCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFTRVMV*LSCTFA
Trigger: TGCAAAAGTGCAGCTAAGCCAGACCATAACTCTAGT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGAGGCACTAGAGTTATaGTCTGGCTTAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIEALEL*SGLAAL
Trigger: AAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTTGCTAGACGCTTATaGCTTCCAATTTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFFARRL*LPIFPH
Trigger: GTGGGGAAAAATTGGAAGCCATAAGCGTCTAGCAAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAAAACAGCAAACTCATaGCACCAGTATGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQKTANS*HQYGQT
Trigger: TGTTTGGCCATACTGGTGCCATGAGTTTGCTGTTTT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAAACAGCAAACTCATaGCACCAGTATGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKTANS*HQYGQT
Trigger: TGTTTGGCCATACTGGTGCCATGAGTTTGCTGTTTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAAGGTGTGGTTTGGATaGACTGCCTTGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANKVWFG*TALERE
Trigger: TTCTCTTTCCAAGGCAGTCCATCCAAACCACACCTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCCAATTTCAAGAGATaGCTTGATGGCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLANFKR*LDGCSL
Trigger: AAGGGAGCAGCCATCAAGCCATCTCTTGAAATTGGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGCCAATTTCAAGAGATaGCTTGATGGCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIANFKR*LDGCSL
Trigger: AAGGGAGCAGCCATCAAGCCATCTCTTGAAATTGGC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp GAGGCACTAGAGTTATGGTCTGGCTTAGCTGCACTTTaGCAGTATCATAAACCAAGAGTAATTCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: EALELWSGLAAL*QYHKPRVILNV
Trigger: AACATTGAGAATTACTCTTGGTTTATGATACTGCAAAAGTGCAGCTAAGCCAGACCATAACTCTAGTGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTGTGGTCATCACTGTTTaGTTACTAGCTGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSAVVITV*LLAVPC
Trigger: ACAAGGAACAGCTAGTAATCAAACAGTGATGACCAC...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTTAATAGTAGTCACTaGACGAAGTCAATCATTCCG +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLNSSH*TKSIIP
Trigger: CGGAATGATTGACTTCGTTCAGTGACTACTATTAAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAGTGGGTACCACTTATaGCATGTACATAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQSGYHL*HVHKFH
Trigger: GTGGAATTTATGTACATGTCATAAGTGGTACCCACT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFSVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAGTGTAATCACTGGCTaGAACCTCAGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADISVITG*NLSTLF
Trigger: AAACAGTGTGCTGAGGTTTCAGCCAGTGATTACACT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGGGCTTAACATTTGTTaGCCCTTAGATATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRGLNIC*PLDMEQ
Trigger: CTGCTCCATATCTAAGGGTCAACAAATGTTAAGCCC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATTTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTTCAGCCAGTTCTTTaGTGGCAAGTCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIFQPVL*WQVLLH
Trigger: ATGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGAAGAACTGAGCAACTaGCCTGCAAACACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFEELSN*PANTEV
Trigger: AACTTCAGTGTTTGCAGGTCAGTTGCTCAGTTCTTC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTATCTTCTGAAGAACTaGGCAACTGACCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANYLLKN*ATDLQT
Trigger: TGTTTGCAGGTCAGTTGCTCAGTTCTTCAGAAGATA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGACCTGATATGCATGTaGCTCAGATATGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHDLICM*LRYVEF
Trigger: GAACTCCACATATCTGAGTCACATGCATATCAGGTC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTTTGCTGGCATAACTaGGCAGCTGAATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFCWHN*AAECHS
Trigger: AGAGTGACATTCAGCTGCTCAGTTATGCCAGCAAAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTACCCTAATTTTGCCCTaGTCAGAGGCACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFTLILP*SEALEL
Trigger: TAACTCTAGTGCCTCTGATCAGGGCAAAATTAGGGT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCAGTCTAGTCTTTGCTaGCTCATGACCTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRQSSLC*LMTSIV
Trigger: CACAATTGAGGTCATGAGTCAGCAAAGACTAGACTG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTGGTGGTATAAAATTTaGAGGCCTTCTTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANWWYKI*RPSSCV
Trigger: CACACAGGAAGAAGGCCTTCAAATTTTATACCACCA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTTTGCTGACATCTCACTaGAATCTAATGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLLTSH*NLMMWK
Trigger: TTTCCACATCATTAGATTTCAGTGAGATGTCAGCAA...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTGCTGACATCTCACTaGAATCTAATGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLLTSH*NLMMWK
Trigger: TTTCCACATCATTAGATTTCAGTGAGATGTCAGCAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFATRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCCTCAGGGTTTCAAATaGAGATCTCCCAAATGTACA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANPQGFK*RSPKCT
Trigger: TGTACATTTGGGAGATCTGCATTTGAAACCCTGAGG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTTACCCAACAATTCTaGCCTCTGGAGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFFTQQF*PLEGHS
Trigger: AGAATGTCCCTCCAGAGGGCAGAATTGTTGGGTAAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTGCTCTGCGCTATATaGTTTACCCAACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADILLCAI*FTQQFC
Trigger: GCAGAATTGTTGGGTAAAGCATATAGCGCAGAGCAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANNKWPN*PLRIFH
Trigger: ATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGTATATACGTGCACGTaGACATGGACTGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLVYTCT*TWTGKE
Trigger: TTCTTTCCCAGTCCATGTGCACGTGCACGTATATAC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAGGTGCGCACCATTATaGCCAGTAAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKRCAPL*PVNFCI
Trigger: AATACAAAAATTTACTGGGCATAATGGTGCGCACCT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR GCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTCTTCATTTCTCTATaGTTTATTCCCCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALFISL*FIPQKN
Trigger: ATTCTTCTGGGGAATAAAGCATAGAGAAATGAAGAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTCTGCAGGCTATGTCTaGATAATACTCTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRSAGYV*IILSVH
Trigger: GTGAACGGAGAGTATTATGCAGACATAGCCTGCAGA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATCATCTTTCTTCTCTaGCAATTTCAAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKIIFLL*QFQEMA
Trigger: AGCCATCTCTTGAAATTGGCAGAGAAGAAAGATGAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTATCATCTTTCTTCTCTaGCAATTTCAAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCIIFLL*QFQEMA
Trigger: AGCCATCTCTTGAAATTGGCAGAGAAGAAAGATGAT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTCAATTGTGACACCTaGTCTAGTTATGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLNCDT*SSYVLL
Trigger: GAGCAAAACATAACTAGAGCAGGTGTCACAATTGAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCGAATAATATCCCCTaGCTGTATAAGACCTCCGAT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPNNIP*LYKTSD
Trigger: ATCGGAGGTCTTATACAGCCAGGGGATATTATTCGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAACACCATTTCCCACTaGTCCAAATGTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRNTISH*SKCTCT
Trigger: GGTACAGGTACATTTGGACCAGTGGGAAATGGTGTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFANTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQSKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGTAGTTAAGATGTACTaGCTCTCCACTGTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFVVKMY*LSTVSH
Trigger: ATGACTTACAGTGGAGAGCCAGTACATCTTAACTAC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGATCAGTATCAATTCTaGCCTGCTAGGAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLDQYQF*PARNRN
Trigger: GTTCCTGTTCCTAGCAGGCCAGAATTGATACTGATC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTAGCATCATTCCCTTaGCATTACTCAACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLASFP*HYSTQQ
Trigger: TTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATATTCTCAGCCTAAAATaGCTTGGAACAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANILSLK*LGTNSQ
Trigger: CTGGCTGTTTGTTCCAAGCCATTTTAGGCTGAGAAT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATACTGAGATCTTTACGTaGAAGATGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANTEIFT*KMKGGF
Trigger: GAAACCACCCTTCATCTTCCACGTAAAGATCTCAGT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATCATCTTGTCCTGCTaGGCAGAGGTGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIIILSC*AEVNGK
Trigger: TTTTCCATTCACCTCTGCCCAGCAGGACAAGATGAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGGCTGTACTCTGGCATaGTTAAGACTTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIGCTLA*LRLGEI
Trigger: GATTTCTCCAAGTCTTAACCATGCCAGAGTACAGCC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCTTTTCAATCTTCTGTaGCCATCAAGTTTGCTATTG +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFLFNLL*PSSLLL
Trigger: CAATAGCAAACTTGATGGCCACAGAAGATTGAAAAG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATACAAATGTTCAAACATaGTCTTGGGAAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANTNVQT*SWEAPL
Trigger: CAGAGGAGCTTCCCAAGACCATGTTTGAACATTTGT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCCAAAGGAATTCATATaGACACCAATCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLPKEFI*TPICPA
Trigger: TGCTGGGCAGATTGGTGTCCATATGAATTCCTTTGG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAGGTGTGGTTTGGATaGACTGCCTTGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKVWFG*TALERE
Trigger: TTCTCTTTCCAAGGCAGTCCATCCAAACCACACCTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp ACAGAGGCTTCTAGAATGACAGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTA +
Preference number: 4 (lower is better)
Translates to: TEASRMTAMFCI*IEVAIKPRYLL
Trigger: TAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACATTGCTGTCATTCTAGAAGCCTCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATCCACTGTAAGTCATTaGAAGGGCAAAAATTACGTA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQSTVSH*KGKNYV
Trigger: TACGTAATTTTTGCCCTTTCAATGACTTACAGTGGA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGATCTGATGAGACTTTaGTCCACTCCAGAACTGTTT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFDLMRL*STPELF
Trigger: AAACAGTTCTGGAGTGGATCAAAGTCTCATCAGATC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAAACATGGGACTGGTTaGTTACCCAGTGTAATCACT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFKHGTG*LPSVIT
Trigger: AGTGATTACACTGGGTAATCAACCAGTCCCATGTTT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATATTACAACTCCTTTGTaGAACATGGGACTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANITTPL*NMGLVD
Trigger: ATCAACCAGTCCCATGTTTCACAAAGGAGTTGTAAT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTTATAGGTCAACAATaGTCATCCAAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFIGQQ*SSKPTR
Trigger: ACGTGTGGGCTTGGATGATCATTGTTGACCTATAAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTCTTTACGTGGAAGATaGAGGGTGGTTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFSLRGR*RVVSLS
Trigger: ACTTAGAGAAACCACCCTTCATCTTCCACGTAAAGA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTCTCTGTACAGAACTaGGATCTTTACGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLSVQN*DLYVED
Trigger: ATCTTCCACGTAAAGATCTCAGTTCTGTACAGAGAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCAGAGGCTTCTAGAATaGCAGCAATGTTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLQRLLE*QQCSVS
Trigger: AGATACAGAACATTGCTGTCATTCTAGAAGCCTCTG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCTTTTTCTGCAAACACTaGAGTTCCAGGATACTCCCT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIFFCKH*SSRILP
Trigger: AGGGAGTATCCTGGAACTTCAGTGTTTGCAGAAAAA...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAGTATTGTAGCCATGTaGATAATGGGAACGTCATGT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANSIVAM*IMGTSC
Trigger: ACATGACGTTCCCATTATTCACATGGCTACAATACT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGTATTAGATTGGGTTTaGGTCTATTTGACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQVLDWV*VYLTEL
Trigger: TAGCTCTGTCAAATAGACTCAAACCCAATCTAATAC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCTCTTATTCTGCTCTaGGCTATATGCTTTACCCAA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPLILL*AICFTQ
Trigger: TTGGGTAAAGCATATAGCGCAGAGCAGAATAAGAGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAACAAATGGCCCAACTaGCCCTTAAGGATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRNKWPN*PLRIFH
Trigger: ATGGAAAATCCTTAAGGGGCAGTTGGGCCATTTGTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATCATCTTTCTTCTCTaGCAATTTCAAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFIIFLL*QFQEMA
Trigger: AGCCATCTCTTGAAATTGGCAGAGAAGAAAGATGAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAATATACATCTTCACTaGTCCATTGTTTTACTCCTC +
Preference number: 4 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCNIHLH*SIVLLL
Trigger: GAGGAGTAAAACAATGGAGCAGTGAAGATGTATATT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTCAATTGTGACACCTaGTCTAGTTATGTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLNCDT*SSYVLL
Trigger: GAGCAAAACATAACTAGAGCAGGTGTCACAATTGAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTGTCCTCGATAATCTaGGTTGGGTTCACTGAAATT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADILSSII*VGFTEI
Trigger: AATTTCAGTGAACCCAACCCAGATTATCGAGGACAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTAGTAAAAAGGGGAAGTaGGTACCACTTATGACATGT +
Preference number: 4 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSASKKGK*VPLMTC
Trigger: ACATGTCATAAGTGGTACCCACTTCCCCTTTTTACT...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTTGTAGAAATGATATaGGGGACCCAATTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFVEMI*GTQFWW
Trigger: CCACCAGAATTGGGTCCCCCATATCATTTCTACAAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGTCTTCACATCACGCTaGTTCTCTCACAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRVFTSR*FSHSSK
Trigger: TTTACTACTGTGAGAGAACCAGCGTGATGTGAAGAC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGCCACAATAAAATTGTaGGTTGTCAACCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIATIKL*VVNQDP
Trigger: AGGGTCTTGGTTGACAACCCACAATTTTATTGTGGC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTTTTAACAAGTTCCTaGGAAGCCTCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADILLTSS*EASCRW
Trigger: CCATCTACATGAGGCTTCCCAGGAACTTGTTAAAAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTGCTTAAAAGAGCCTaGTATCTCTCTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLLKRA*YLSCFL
Trigger: GAGGAAGCAAGAGAGATACCAGGCTCTTTTAAGCAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGTCAGAGACAGTGGTTaGTCATTTTCATTTGACTTC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANVRDSG*SFSFDF
Trigger: GAAGTCAAATGAAAATGACCAACCACTGTCTCTGAC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTACTAGAGTTATGGTCTaGCTTAGCTGCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFTRVMV*LSCTFA
Trigger: TGCAAAAGTGCAGCTAAGCCAGACCATAACTCTAGT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTTGCTAGACGCTTATaGCTTCCAATTTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFARRL*LPIFPH
Trigger: GTGGGGAAAAATTGGAAGCCATAAGCGTCTAGCAAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp TTAGTTCAGAAACCTGGAGTAATTTGGTTACAATATTaGAATTCCAAACTCAGGCAGTCTCCAGTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LVQKPGVIWLQY*NSKLRQSPVKH
Trigger: GTGCTTTACTGGAGACTGCCTGAGTTTGGAATTCAAATATTGTAACCAAATTACTCCAGGTTTCTGAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCGCTAATAAGGCTATGTaGACTGTGTTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: ILLFMELFFCSLCAPLFCANKAM*TVFRNF
Trigger: AAAGTTTCTGAACACAGTTCACATAGCCTTATTAGC...GCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR TCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCAGCCAGTATCTCAATaGCACCAGAAAAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFQPVSQ*HQKKSF
Trigger: AAATGACTTTTTCTGGTGTCATTGAGATACTGGCTG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGTTTCTAGAACCCTCTaGAATGCATTAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIVSRTL*NALEDL
Trigger: AAGGTCTTCTAATGCATTTCAGAGGGTTCTAGAAAC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCTCAGAAGCATACCTaGACTGTTAATCATTACAAC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPQKHT*TVNHYN
Trigger: GTTGTAATGATTAACAGTTCAGGTATGCTTCTGAGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAGAATCAATATCTTCTaGAGAACTGAGCAACTGACC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLRINIF*RTEQLT
Trigger: GGTCAGTTGCTCAGTTCTTCAGAAGATATTGATTCT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTGCTATTGTCATTTTaGTCATGCAGGACACATGGA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLLLSF*SCRTHG
Trigger: TCCATGTGTCCTGCATGATCAAAATGACAATAGCAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTCTTCTGAATCATTATaGAGATGTGTCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRSSESL*RCVCCL
Trigger: CAAGCAGCAGACACATCTTCATAATGATTCAGAAGA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANKLKVF*IIMKMC
Trigger: ACACATCTTCATAATGATTCAGAAGACCTTCAGCTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAAATCCCAAGCCCATaGCGAAACAAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKIPSP*RNKQKC
Trigger: ACATTTCTGTTTGTTTCGTCATGGGCTTGGGATTTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAAAATCCCAAGCCCATaGCGAAACAAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIKIPSP*RNKQKC
Trigger: ACATTTCTGTTTGTTTCGTCATGGGCTTGGGATTTT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAGTATTGTAGCCATGTaGATAATGGGAACGTCATGT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFSIVAM*IMGTSC
Trigger: ACATGACGTTCCCATTATTCACATGGCTACAATACT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTTTATCTGCTACTTTaGACGATCTCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFFYLLL*TISLHG
Trigger: GCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTTTATCTGCTACTTTaGACGATCTCACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFYLLL*TISLHG
Trigger: GCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQTRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTCTCAAGAGACCTGTaGTCTTTTATAGGTCAACAA +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLSRDL*SFIGQQ
Trigger: TTGTTGACCTATAAAAGAGCACAGGTCTCTTGAGAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCTGAACCTCTTATTCTaGTCTGCGCTATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLNLLF*SALYAL
Trigger: TAAAGCATATAGCGCAGAGCAGAATAAGAGGTTCAG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAATATACATCTTCACTaGTCCATTGTTTTACTCCTC +
Preference number: 4 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNIHLH*SIVLLL
Trigger: GAGGAGTAAAACAATGGAGCAGTGAAGATGTATATT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: WKILIVVTERSQSFREPQLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTGTGAAACATGGGACTaGTTGATTACCCAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFCETWD*LITQCN
Trigger: ATTACACTGGGTAATCAACCAGTCCCATGTTTCACA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAAAATCGCTATTCATTaGAACAGAACCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIKIAIH*NRTISP
Trigger: GGGGGAAATGGTTCTGTTCCAATGAATAGCGATTTT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATACAGCAGCAGTCATTTaGCCAGGATTTTACCAAATA +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHTAAVI*PGFYQI
Trigger: TATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCCATGTTCTTCTTCATaGAAGCACATTCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHPCSSS*KHILAF
Trigger: AAATGCCAGAATGTGCTTCCATGAAGAAGAACATGG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTCAGAAGTCCAGGCATaGCTGTTTACAAATGTTCAA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFSEVQA*LFTNVQ
Trigger: TTGAACATTTGTAAACAGCCATGCCTGGACTTCTGA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGTCAGAGACAGTGGTTaGTCATTTTCATTTGACTTC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRVRDSG*SFSFDF
Trigger: GAAGTCAAATGAAAATGACCAACCACTGTCTCTGAC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAACAAAAATTTGGGATaGGTCAGTCCTTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFNKNLG*VSPWKI
Trigger: GATTTTCCAAGGACTGACTCATCCCAAATTTTTGTT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCAGCATTCCATACCTaGCAGCATTTAAATTTTCTA +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPAFHT*QHLNFL
Trigger: TAGAAAATTTAAATGCTGTCAGGTATGGAATGCTGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCATATTAGAGAACTGTaGTCTTCTTTCTCCACTAGA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLHIREL*SSFSTR
Trigger: TCTAGTGGAGAAAGAAGATCACAGTTCTCTAATATG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCTCCCAAATGTACACTaGTGTTATTCTAGTAATGCA +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLPNVH*CYSSNA
Trigger: TGCATTACTAGAATAACATCAGTGTACATTTGGGAG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCAAGCTGAAGGTCTTCTaGATCATTATGAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLKLKVF*IIMKMC
Trigger: ACACATCTTCATAATGATTCAGAAGACCTTCAGCTT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR TCA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGTATTAGATTGGGTTTaGGTCTATTTGACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRVLDWV*VYLTEL
Trigger: TAGCTCTGTCAAATAGACTCAAACCCAATCTAATAC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAATATACATCTTCACTaGTCCATTGTTTTACTCCTC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANNIHLH*SIVLLL
Trigger: GAGGAGTAAAACAATGGAGCAGTGAAGATGTATATT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTGTTTTCATACTTGTaGAACCTAAGGCTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLFSYL*NLRLKD
Trigger: GTCTTTAAGCCTTAGGTTCCACAAGTATGAAAACAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTAGAGGAATTTGTTTaGGGGGCATTCTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLEEFV*GAFYVV
Trigger: AACAACATAGAATGCCCCCCAAACAAATTCCTCTAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CCA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTGTTTCACAATTGCCTaGTCTTTACATCTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: SHLFVFSIIPLALLNPANCFTIA*SLHLLN
Trigger: ATTTAGGAGATGTAAAGACCAGGCAATTGTGAAACA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
3UTR CAA 72 bp AGGACTTCAGACTGCATGTTACTATATGAATTCAATTaGACTCACCTCCAGTATGTTTATCTACCACAACTA +
Preference number: 4 (lower is better)
Translates to: RTSDCMLLYEFN*THLQYVYLPQL
Trigger: TAGTTGTGGTAGATAAACATACTGGAGGTGAGTCAAATTGAATTCATATAGTAACATGCAGTCTGAAGTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCACTAGGACTTCAGACTaGATGTTACTATATGAATTC +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADITRTSD*MLLYEF
Trigger: GAATTCATATAGTAACATGCAGTCTGAAGTCCTAGT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR GCA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTGTGGCCATCAAGTTTaGTATTGTCATTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: RATNTQKLLLALTSSCVFCGHQV*YCHFDH
Trigger: ATGATCAAAATGACAATAGCAAACTTGATGGCCACA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR GCA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTCTTCATTTCTCTATaGTTTATTCCCCAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TVWIYSNITCSQTTFADILFISL*FIPQKN
Trigger: ATTCTTCTGGGGAATAAAGCATAGAGAAATGAAGAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CCA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATAATACAACAAAAATTTaGGATGAGTCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHNTTKI*DESVLG
Trigger: TCCAAGGACTGACTCATCCCAAATTTTTGTTGTATT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CCA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTAGGGCAAACAATCTaGCACAACTTTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLGQTI*HNFLYS
Trigger: TGAATACAAAAAGTTGTGCCAGATTGTTTGCCCTAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS TCA 90 bp GGGCGCGCGCCCAGCCTGTCCCGGGCTCCGGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGAGACAGAACACCGCACACCCAGCGT +
Preference number: 5 (lower is better)
Translates to: GRAPSLSRAPGRNGL*QRNGSGDRTPHTQR
Trigger: ACGCTGGGTGTGCGGTGTTCTGTCTCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCCCGGAGCCCGGGACAGGCTGGGCGCGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000462712.5
ENST00000491331.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CCA 90 bp CTATTCATATTGGGACAGGCGCGGCTACGGCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGCTTCCCACCCTCCCGGGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: LFILGQARLRLRRRE*AGRGQSFPPSRDRG
Trigger: GCCCCTGTCCCGGGAGGGTGGGAAGCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCTGTCCCAATATGAATAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CCA 90 bp GTGATGCTGCCCGTTTTATCTGCTACTTTGCACGATCTCACTTCATaGCCGTCTTTGGTTTTGGTCACGCGTCACGGGCGCGCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: VMLPVLSATLHDLTS*PSLVLVTRHGRAPS
Trigger: GCTGGGCGCGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000462712.5
ENST00000491331.5
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CAA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTTGGCCGTCTTTGGTTTaGGTCACGCGTCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTWPSLV*VTRHGR
Trigger: GCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCA...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307834.9
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTGGCCGTCTTTGGTTTaGGTCACGCGTCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQWPSLV*VTRHGR
Trigger: GCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGGCCGTCTTTGGTTTaGGTCACGCGTCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNWPSLV*VTRHGR
Trigger: GCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTGGCCGTCTTTGGTTTaGGTCACGCGTCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLWPSLV*VTRHGR
Trigger: GCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGTGATCCACCCACCTaGGCCTCTCAAAGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGDPPT*ASQSAG
Trigger: CCCAGCGCTTTGAGAGGCCAAGGTGGGTGGATCACC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCTCCCCCACCTGGCTaGCAACTGCCCTCCCAAATT +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPPPPG*QLPSQI
Trigger: AATTTGGGAGGGCAGTTGCAAGCCAGGTGGGGGAGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTGACCCTATTCATATaGGGACAGGCGCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNLTLFI*GQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATTGCTTCTGCCAGCATGTGAATTGACCCTATTCATATaGGGACAGGCGCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: PCSCGFISPRPLLLPACELTLFI*GQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAA...TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGGCCGTCTTTGGTTTaGGTCACGCGTCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNWPSLV*VTRPIS
Trigger: GGAGATAGGACGCGTGACCAAAACCAAAGACGGCCA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CATGAGAGTGAACCATGTTTAGGGTTCCAGGGTGGTTTCTCCAGCAGTGGTAATTGGCCGTCTTTGGTTTaGGTCACGCGTCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: HESEPCLGFQGGFSSSGNWPSLV*VTRPIS
Trigger: GGAGATAGGACGCGTGACCAAAACCAAAGACGGCCA...ATTACCACTGCTGGAGAAACCACCCTGGAACCCTAAACATGGTTCACTCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451500.5
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCGTCAGCATAAGTGCTaGTCTGTGCCCAGACAAGAC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNRQHKC*SVPRQD
Trigger: GTCTTGTCTGGGCACAGACAAGCACTTATGCTGACG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGGAGAAGGTGTGGTTaGGATGGACTGCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGRRCG*DGLPWK
Trigger: TTTCCAAGGCAGTCCATCCAAACCACACCTTCTCCC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTCCTCCCCCACCTGGCTaGCAACTGCCCTCCCAAATT +
Preference number: 5 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCPPPPG*QLPSQI
Trigger: AATTTGGGAGGGCAGTTGCAAGCCAGGTGGGGGAGG...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS CCA 90 bp GTGATGCTGCCCGTTTTATCTGCTACTTTGCACGATCTCACTTCATaGCCGTCTTTGGTTTTGGTCACGCGTCCTATCTCCAGGACAATA +
Preference number: 5 (lower is better)
Translates to: VMLPVLSATLHDLTS*PSLVLVTRPISRTI
Trigger: TATTGTCCTGGAGATAGGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTGACCCTATTCATATaGGGACAGGCGCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLTLFI*GQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGTAGGTCAGCAATTTaGGCAGAGCTCAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNCRSAI*AELSAV
Trigger: GACAGCACTGAGCTCTGCCAAAATTGCTGACCTACA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGCTTCAGAGGTCAGCTaGAAGCAGCAAGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNASEVS*KQQVTS
Trigger: AGAAGTGACTTGCTGCTTCAAGCTGACCTCTGAAGC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCCTCCCCCACCTGGCTaGCAACTGCCCTCCCAAATT +
Preference number: 5 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCPPPPG*QLPSQI
Trigger: AATTTGGGAGGGCAGTTGCAAGCCAGGTGGGGGAGG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGATCTTCACTGCTCCATaGTTTTACTCCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQIFTAP*FYSSPT
Trigger: GGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGAT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCAGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: SPRPLLLPACENWCSLDSVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTATGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCACTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: SPRPLLLPACENWCSLDSLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQLSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGGCTTAGCTGCACTTTaGCAGTATCATAAACCAAGA +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPGLAAL*QYHKPR
Trigger: TCTTGGTTTATGATACTGCAAAAGTGCAGCTAAGCC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGATATACCCCTATTTTaGCTAGACGCTTATGGCTTC +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPDIPLF*LDAYGF
Trigger: GAAGCCATAAGCGTCTAGCAAAAATAGGGGTATATC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGGGAGAAGGTGTGGTTaGGATGGACTGCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQGRRCG*DGLPWK
Trigger: TTTCCAAGGCAGTCCATCCAAACCACACCTTCTCCC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGCTCACGCAGGGCACTaGGTAAAGAGAAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQAHAGH*VKRKEP
Trigger: TGGCTCTTTTCTCTTTACCAAGTGCCCTGCGTGAGC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CCA 90 bp TTTCCACATGGATGCATACCCTCTGGTCAACCGAATAATATCCCCTaGCTGTATAAGACCTCCGATCTCATCCCACACGGAAATAGTGAT +
Preference number: 5 (lower is better)
Translates to: FPHGCIPSGQPNNIP*LYKTSDLIPHGNSD
Trigger: ATCACTATTTCCGTGTGGGATGAGATCGGAGGTCTTATACAGCCAGGGGATATTATTCGGTTGACCAGAGGGTATGCATCCATGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000409510.5
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000462712.5
ENST00000491331.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CCA 90 bp GCCTGTACCATACTTTATGAATACAACCCAATGTCTAGGCTAACATaGAGGCTGAATTACCTTACACCCCTAGAGAGGATGGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ACTILYEYNPMSRLT*RLNYLTPLERMAPP
Trigger: TGGAGGAGCCATCCTCTCTAGGGGTGTAAGGTAATTCAGCCTCCATGTTAGCCTAGACATTGGGTTGTATTCATAAAGTATGGTACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462712.5
CDS-3UTR CAA 90 bp TTCACTCTGTGCCCCTTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: FTLCPFVLLSSIIWVGFTVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...AGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAAGGGGCACAGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCAGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: SPRPLLLPACENWCSLDSGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTGACCCTATTCATATaGGGACAGGCGCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLTLFI*GQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTGGCCGTCTTTGGTTTaGGTCACGCGTCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFWPSLV*VTRPIS
Trigger: GGAGATAGGACGCGTGACCAAAACCAAAGACGGCCA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307849.7
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTGGCCGTCTTTGGTTTaGGTCACGCGTCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVWPSLV*VTRPIS
Trigger: GGAGATAGGACGCGTGACCAAAACCAAAGACGGCCA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTTAGCATCATTCCCTaGGCATTACTCAACCCAGCA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNFSIIP*ALLNPA
Trigger: TGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTTAGCATCATTCCCTaGGCATTACTCAACCCAGCA +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFSIIP*ALLNPA
Trigger: TGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCTCCTCGAAGTCTCATGTTGAAATATGATCCCCGCTGTTGGAGACGGGGCCTAGTCAAATTCCATATTTaGTTCTCCATCTTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: SPRSLMLKYDPRCWRRGLVKFHI*FSIFPS
Trigger: AGAGGGGAAGATGGAGAACAAAATATGGAATTTGAC...TAGGCCCCGTCTCCAACAGCGGGGATCATATTTCAACATGAGACTTCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTGGGAGAAGGTGTGGTTaGGATGGACTGCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCGRRCG*DGLPWK
Trigger: TTTCCAAGGCAGTCCATCCAAACCACACCTTCTCCC...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCTCACGCAGGGCACTaGGTAAAGAGAAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAAHAGH*VKRKEP
Trigger: TGGCTCTTTTCTCTTTACCAAGTGCCCTGCGTGAGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGTGTGTTTGATTCCATaGCCCCACCCTTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKVCLIP*PHPSPL
Trigger: CAAGGGGGAAGGGTGGGGCAATGGAATCAAACACAC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGTGTGTTTGATTCCATaGCCCCACCCTTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVVCLIP*PHPSPL
Trigger: CAAGGGGGAAGGGTGGGGCAATGGAATCAAACACAC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCAC +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFTSWPS*VLVTRH
Trigger: GTGACGCGTGACCAAAACCAAAGACGGCCATGAAGT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCTTGTAGTTGTGGATTTATAAGTCCCCGGCCATTGCTTCTGCCAGCATGTGAATGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PCSCGFISPRPLLLPACECGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACAACTACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTTGATTCAGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: SPRPLLLPACENWCSLDSAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...TGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CAA 90 bp ACAGCAATTCCAAGGGCTGTCACCGGGAACAGAGAATTCCTTCCAATGTGCCCTGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: TAIPRAVTGNREFLPMCPAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...AGGGCACATTGGAAGGAATTCTCTGTTCCCGGTGACAGCCCTTGGAATTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCCT +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVTSWPS*VLVTRP
Trigger: AGGACGCGTGACCAAAACCAAAGACGGCCATGAAGT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCCT +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFTSWPS*VLVTRP
Trigger: AGGACGCGTGACCAAAACCAAAGACGGCCATGAAGT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCCT +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFTSWPS*VLVTRP
Trigger: AGGACGCGTGACCAAAACCAAAGACGGCCATGAAGT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307849.7
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCCT +
Preference number: 5 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCTSWPS*VLVTRP
Trigger: AGGACGCGTGACCAAAACCAAAGACGGCCATGAAGT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFATMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTGATCATGCAGGACACATGGACAAGCCCACTGTCAGTAGAAAAGAAGAGGACGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 5 (lower is better)
Translates to: FDHAGHMDKPTVSRKEEDGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...GTCCTCTTCTTTTCTACTGACAGTGGGCTTGTCCATGTGTCCTGCATGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAACAGCAGCAGTCATTaGGCCAGGATTTTACCAAAT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNNSSSH*ARILPN
Trigger: ATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTCTCGTCGCCCAGGTaGGAGTGCAGAGGTGCAATC +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLSSPR*ECRGAI
Trigger: GATTGCACCTCTGCACTCCAACCTGGGCGACGAGAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGTATACCACCGTCTATTaGCAAATCATCTACCATGGA +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKYTTVY*QIIYHG
Trigger: TCCATGGTAGATGATTTGCAAATAGACGGTGGTATA...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGGCTTAGCTGCACTTTaGCAGTATCATAAACCAAGA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNGLAAL*QYHKPR
Trigger: TCTTGGTTTATGATACTGCAAAAGTGCAGCTAAGCC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGGCTTAGCTGCACTTTaGCAGTATCATAAACCAAGA +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQGLAAL*QYHKPR
Trigger: TCTTGGTTTATGATACTGCAAAAGTGCAGCTAAGCC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGATATACCCCTATTTTaGCTAGACGCTTATGGCTTC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNDIPLF*LDAYGF
Trigger: GAAGCCATAAGCGTCTAGCAAAAATAGGGGTATATC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTGCTCACGCAGGGCACTaGGTAAAGAGAAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCAHAGH*VKRKEP
Trigger: TGGCTCTTTTCTCTTTACCAAGTGCCCTGCGTGAGC...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCTCCCCCACCTGGCTaGCAACTGCCCTCCCAAATT +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPPPPG*QLPSQI
Trigger: AATTTGGGAGGGCAGTTGCAAGCCAGGTGGGGGAGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGTGTGTTTGATTCCATaGCCCCACCCTTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQVCLIP*PHPSPL
Trigger: CAAGGGGGAAGGGTGGGGCAATGGAATCAAACACAC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGA +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQKISGS*TLFILG
Trigger: TCCCAATATGAATAGGGTCAACGACCCACTTATTTT...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTGGCCGTCTTTGGTTTaGGTCACGCGTCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANWPSLV*VTRPIS
Trigger: GGAGATAGGACGCGTGACCAAAACCAAAGACGGCCA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTTTAGCATCATTCCCTaGGCATTACTCAACCCAGCA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQFSIIP*ALLNPA
Trigger: TGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTATGTGGTCTCATGGCAGTCTCAGGGCTCCAAGCACTTCAAGAGAGAGCAAGATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: FMWSHGSLRAPSTSRESKIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...CTTGCTCTCTCTTGAAGTGCTTGGAGCCCTGAGACTGCCATGAGACCACATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCCCTTCAACAGAGGTaGAGACATATTGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQALQQR*RHIVGV
Trigger: GACCCCCACAATATGTCTCAACCTCTGTTGAAGGGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACGTCAGCATAAGTGCTaGTCTGTGCCCAGACAAGAC +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQRQHKC*SVPRQD
Trigger: GTCTTGTCTGGGCACAGACAAGCACTTATGCTGACG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAGAATCGCCTCAATCTaGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQRIASI*EAEVAV
Trigger: CACTGCAACCTCTGCCTCCAAGATTGAGGCGATTCT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFALSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGCGGGGTGTCTTTACTaGACAAGTAACTTACACTCT +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQAGCLY*TSNLHS
Trigger: AGAGTGTAAGTTACTTGTCAAGTAAAGACACCCCGC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAATAATATAGCAGGATaGCTGGGTCACAAGGCAAAT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNNNIAG*LGHKAN
Trigger: ATTTGCCTTGTGACCCAGCAATCCTGCTATATTATT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTGTAGGTCAGCAATTTaGGCAGAGCTCAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFCRSAI*AELSAV
Trigger: GACAGCACTGAGCTCTGCCAAAATTGCTGACCTACA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGCTTCAGAGGTCAGCTaGAAGCAGCAAGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFASEVS*KQQVTS
Trigger: AGAAGTGACTTGCTGCTTCAAGCTGACCTCTGAAGC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTATAGTTGTTTCACAATaGCCTGGTCTTTACATCTCC +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLIVVSQ*PGLYIS
Trigger: GGAGATGTAAAGACCAGGCAATTGTGAAACAACTAT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTATCTTCACTGCTCCATaGTTTTACTCCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCIFTAP*FYSSPT
Trigger: GGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGAT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATCTTCACTGCTCCATaGTTTTACTCCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVIFTAP*FYSSPT
Trigger: GGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGTGTGTTTGATTCCATaGCCCCACCCTTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANVCLIP*PHPSPL
Trigger: CAAGGGGGAAGGGTGGGGCAATGGAATCAAACACAC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCTTCTTCCTGTGTGTTaGATTCCATTGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFLLPVC*IPLPHP
Trigger: AGGGTGGGGCAATGGAATCAAACACACAGGAAGAAG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CCA 90 bp AAGACCCCACTGGTCCAAATGTACCTGTACCCATATTACTATTCATaGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: KTPLVQMYLYPYYYS*NYSSVHSVPLCSAV
Trigger: GACAGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATATGGGTACAGGTACATTTGGACCAGTGGGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462824.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTGTTCTGCTGTCCTCGATAATCTGGGTTGGGTTCACTGAAATTTGGCACTTCTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FVLLSSIIWVGFTEIWHFCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...GAAGTGCCAAATTTCAGTGAACCCAACCCAGATTATCGAGGACAGCAGAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTGACCCTATTCATATaGGGACAGGCGCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLTLFI*GQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTGACCCTATTCATATaGGGACAGGCGCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLTLFI*GQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAGATCTTTGTAATGAAGACCCAACCCTACATGCTGTCACGGTAAACCGTCAGTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 5 (lower is better)
Translates to: ADLCNEDPTLHAVTVNRQYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...CTGACGGTTTACCGTGACAGCATGTAGGGTTGGGTCTTCATTACAAAGATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCACCCTTCCCCCTTGAATGTCTTCCTCATCTCTTGTACCTTCAGTCTAGTCTTAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: PPFPLECLPHLLYLQSSLNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...AAGACTAGACTGAAGGTACAAGAGATGAGGAAGACATTCAAGGGGGAAGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACGTGGGCGATATGGTTaGGATATTTGTCTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKRGRYG*DICLLE
Trigger: TTCGAGGAGACAAATATCCAAACCATATCGCCCACG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACGCTCTGTATCAGCCTTaGTATAATCATCGTTTAACT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNALYQP*YNHRLT
Trigger: AGTTAAACGATGATTATACAAAGGCTGATACAGAGC...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp TGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACTGTATTAGATTGGGTTaGAGTCTATTTGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: CPYFSVFPFFNRRLEQLNCIRLG*SLFDRA
Trigger: AGCTCTGTCAAATAGACTCAAACCCAATCTAATACA...GTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTATCTTCACTGCTCCATaGTTTTACTCCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFIFTAP*FYSSPT
Trigger: GGTGGGGGAGGAGTAAAACAATGGAGCAGTGAAGAT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCCCACCCTTCCCCCTaGAATGTCTTCCTCATCTCT +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPHPSP*NVFLIS
Trigger: AGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCCCCACCCTTCCCCCTaGAATGTCTTCCTCATCTCT +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFPHPSP*NVFLIS
Trigger: AGAGATGAGGAAGACATTCAAGGGGGAAGGGTGGGG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTATAAGTCCCCGGCCATaGCTTCTGCCAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFISPRP*LLPACE
Trigger: TTCACATGCTGGCAGAAGCAATGGCCGGGGACTTAT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFACGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp TCATCTTTTAAAGGCTCTCCGAGGGTCCCTGCCATTACTTATTGTGGTCATCACGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: SSFKGSPRVPAITYCGHHAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...GTGATGACCACAATAAGTAATGGCAGGGACCCTCGGAGAGCCTTTAAAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307834.9
ENST00000307849.7
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQKISGS*TLFILG
Trigger: TCCCAATATGAATAGGGTCAACGACCCACTTATTTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGA +
Preference number: 5 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYKISGS*TLFILG
Trigger: TCCCAATATGAATAGGGTCAACGACCCACTTATTTT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674172.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCCT +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFTSWPS*VLVTRP
Trigger: AGGACGCGTGACCAAAACCAAAGACGGCCATGAAGT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTTAGCATCATTCCCTaGGCATTACTCAACCCAGCA +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKFSIIP*ALLNPA
Trigger: TGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AACACCTCTGATGGCAGTGATAATGTGTCATGTGTTCGTGTATATACGTGCACGCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: NTSDGSDNVSCVRVYTCTLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...CGTGCACGTATATACACGAACACATGACACATTATCACTGCCATCAGAGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410026.7
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCGTCAGCATAAGTGCTaGTCTGTGCCCAGACAAGAC +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFRQHKC*SVPRQD
Trigger: GTCTTGTCTGGGCACAGACAAGCACTTATGCTGACG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCGTCAGCATAAGTGCTaGTCTGTGCCCAGACAAGAC +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRRQHKC*SVPRQD
Trigger: GTCTTGTCTGGGCACAGACAAGCACTTATGCTGACG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCATGAAGGGCTAGGTTaGGCTGTACTCTGGCATGGT +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLHEGLG*AVLWHG
Trigger: ACCATGCCAGAGTACAGCCAAACCTAGCCCTTCATG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAGATGTGTCTGCTGCTaGACTTCTCCTTTAGGAACT +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFRCVCC*TSPLGT
Trigger: AGTTCCTAAAGGAGAAGTCAAGCAGCAGACACATCT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAGATGTGTCTGCTGCTaGACTTCTCCTTTAGGAACT +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKRCVCC*TSPLGT
Trigger: AGTTCCTAAAGGAGAAGTCAAGCAGCAGACACATCT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGGGAGAAGGTGTGGTTaGGATGGACTGCCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFGRRCG*DGLPWK
Trigger: TTTCCAAGGCAGTCCATCCAAACCACACCTTCTCCC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGCTCACGCAGGGCACTaGGTAAAGAGAAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRAHAGH*VKRKEP
Trigger: TGGCTCTTTTCTCTTTACCAAGTGCCCTGCGTGAGC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCTTCAGAGGTCAGCTaGAAGCAGCAAGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLASEVS*KQQVTA
Trigger: TGCAGTGACTTGCTGCTTCAAGCTGACCTCTGAAGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGCTTCAGAGGTCAGCTaGAAGCAGCAAGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIASEVS*KQQVTA
Trigger: TGCAGTGACTTGCTGCTTCAAGCTGACCTCTGAAGC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674360.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAACCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGACAATGAGGCCAGGATaGGAAGCCCAGCATTCCATA +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRTMRPG*EAQHSI
Trigger: TATGGAATGCTGGGCTTCCAATCCTGGCCTCATTGT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 5 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFARVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAACAGCAGCAGTCATTaGGCCAGGATTTTACCAAAT +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFNSSSH*ARILPN
Trigger: ATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AATAAATGCCCCTACTTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 5 (lower is better)
Translates to: NKCPYFSVFPFFNRRLEQYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...CTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAAGTAGGGGCATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTGTACTTTCATCATCTaGTCCTGCTGGGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRCTFII*SCWAEV
Trigger: CACCTCTGCCCAGCAGGACAAGATGATGAAAGTACA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GCAAGCTCAATGCCCAAGCACTTTTCAATCTTCTGTGGCCATCAAGTTTGCTATAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: ASSMPKHFSIFCGHQVCYNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...ATAGCAAACTTGATGGCCACAGAAGATTGAAAAGTGCTTGGGCATTGAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATCTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTGTAGGTCAGCAATTTaGGCAGAGCTCAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFCRSAI*AELSAV
Trigger: GACAGCACTGAGCTCTGCCAAAATTGCTGACCTACA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAGATGTGTCTGCTGCTaGACTTCTCCTTTAGGAACT +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFRCVCC*TSPLGT
Trigger: AGTTCCTAAAGGAGAAGTCAAGCAGCAGACACATCT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGATATACCCCTATTTTaGCTAGACGCTTATGGCTTC +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKDIPLF*LDAYGF
Trigger: GAAGCCATAAGCGTCTAGCAAAAATAGGGGTATATC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAAAGAGAATAGAAAGTaGAGAGGAGGGGCAGTATTG +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFKENRK*RGGAVL
Trigger: CAATACTGCCCCTCCTCTCAACTTTCTATTCTCTTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAAAGAGAATAGAAAGTaGAGAGGAGGGGCAGTATTG +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKKENRK*RGGAVL
Trigger: CAATACTGCCCCTCCTCTCAACTTTCTATTCTCTTT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCTTCTTCCTGTGTGTTaGATTCCATTGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADILLPVC*IPLPHP
Trigger: AGGGTGGGGCAATGGAATCAAACACACAGGAAGAAG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTTCTTCCTGTGTGTTaGATTCCATTGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLLPVC*IPLPHP
Trigger: AGGGTGGGGCAATGGAATCAAACACACAGGAAGAAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTTCTTCCTGTGTGTTaGATTCCATTGCCCCACCCT +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLLPVC*IPLPHP
Trigger: AGGGTGGGGCAATGGAATCAAACACACAGGAAGAAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS TCA 90 bp AAATCCTCGACTGACCCTGACAAAGAGCAGTCATTAAGAAATGAGTaGCCTCTAACGGTTTTTCACGTAACTGACCTCCATTATTATCAA +
Preference number: 5 (lower is better)
Translates to: KSSTDPDKEQSLRNE*PLTVFHVTDLHYYQ
Trigger: TTGATAATAATGGAGGTCAGTTACGTGAAAAACCGTTAGAGGTCACTCATTTCTTAATGACTGCTCTTTGTCAGGGTCAGTCGAGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462712.5
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIKTGVP*IQGQCE
Trigger: TTCACACTGGCCCTGAATCAAGGGAACACCAGTTTT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFCGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGA +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFKISGS*TLFILG
Trigger: TCCCAATATGAATAGGGTCAACGACCCACTTATTTT...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GACGAAACAAACAGAAATGTGCATGCTGCTGTATCTAGGTCCTTTAAAAGCTGTAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: DETNRNVHAAVSRSFKSCSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...ACAGCTTTTAAAGGACCTAGATACAGCAGCATGCACATTTCTGTTTGTTTCGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAACAGCAGCAGTCATTaGGCCAGGATTTTACCAAAT +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNSSSH*ARILPN
Trigger: ATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CTGTATCAGCCTTTGTATAATCATCGTTTAACTCAGAAGTCCAGGCATGGCTGTTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 5 (lower is better)
Translates to: LYQPLYNHRLTQKSRHGCYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...ACAGCCATGCCTGGACTTCTGAGTTAAACGATGATTATACAAAGGCTGATACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGCTGAGATTGCACCATaGCAATCCAGCCTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFAEIAP*QSSLSK
Trigger: TTTACTCAGGCTGGATTGCAATGGTGCAATCTCAGC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFANLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCTTTCAGCCAGTTCTTaGATGGCAAGTCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFLSASS*MASPPS
Trigger: TGAAGGAGGACTTGCCATCAAAGAACTGGCTGAAAG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTTCAGTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTGCTCTGTATCAGCCTTaGTATAATCATCGTTTAACT +
Preference number: 5 (lower is better)
Translates to: FSVFPFFNRRLEQLNSFAALYQP*YNHRLT
Trigger: AGTTAAACGATGATTATACAAAGGCTGATACAGAGC...AGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674262.1
ENST00000674406.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATAGTTGTTTCACAATaGCCTGGTCTTTACATCTCC +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKIVVSQ*PGLYIS
Trigger: GGAGATGTAAAGACCAGGCAATTGTGAAACAACTAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAGATGTGTCTGCTGCTaGACTTCTCCTTTAGGAACT +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANRCVCC*TSPLGT
Trigger: AGTTCCTAAAGGAGAAGTCAAGCAGCAGACACATCT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAAAGAGAATAGAAAGTaGAGAGGAGGGGCAGTATTG +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFKENRK*RGGAVL
Trigger: CAATACTGCCCCTCCTCTCAACTTTCTATTCTCTTT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAAAGAGAATAGAAAGTaGAGAGGAGGGGCAGTATTG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQKENRK*RGGAVL
Trigger: CAATACTGCCCCTCCTCTCAACTTTCTATTCTCTTT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TATTACTATTCATGGAATTATTCTTCTGTTCACTCTGTGCCCCTTTGTTCTGCTTGTGGTCATCACTGTTaGATTACTAGCTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: YYYSWNYSSVHSVPLCSACGHHC*ITSCSL
Trigger: CAAGGAACAGCTAGTAATCAAACAGTGATGACCACA...AGCAGAACAAAGGGGCACAGAGTGAACAGAAGAATAATTCCATGAATAGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000451500.5
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAAATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTCACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATGAAACATGGGACTGGTaGATTACCCAGTGTAATCAC +
Preference number: 5 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHETWDW*ITQCNH
Trigger: GTGATTACACTGGGTAATCAACCAGTCCCATGTTTC...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAATTCTTAAAATGTTCGTaGTCTTCACATCACGCTGGT +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQFLKCS*SSHHAG
Trigger: ACCAGCGTGATGTGAAGACAACGAACATTTTAAGAA...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGGAGCCACAATAAAATaGTGGGTTGTCAACCAAGAC +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFGATIK*WVVNQD
Trigger: GTCTTGGTTGACAACCCACAATTTTATTGTGGCTCC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAGCCTAATTCAAAATTaGCAATACCCTCATCCAGAG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQSLIQN*QYPHPE
Trigger: CTCTGGATGAGGGTATTGCAAATTTTGAATTAGGCT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GGCTATAAAGCTGATGTCTTAAGTAACTCACCCATGAAATGGGTGCAGGTTTTTCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: GYKADVLSNSPMKWVQVFQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...AAAAACCTGCACCCATTTCATGGGTGAGTTACTTAAGACATCAGCTTTATAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAACAGCAGCAGTCATTaGGCCAGGATTTTACCAAAT +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANNSSSH*ARILPN
Trigger: ATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GATGTACTGGCTCTCCACTGTAAGTCATTGAAAGGGCAAAAATTACGTAGGTTTAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: DVLALHCKSLKGQKLRRFNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...AAACCTACGTAATTTTTGCCCTTTCAATGACTTACAGTGGAGAGCCAGTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATTGAGGCTTTCAGTCTaGCATCTTTATAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKLRLSV*HLYSCF
Trigger: GAAACAACTATAAAGATGCAAGACTGAAAGCCTCAA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTGTATTAGATTGGGTTaGAGTCTATTTGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVCIRLG*SLFDRA
Trigger: AGCTCTGTCAAATAGACTCAAACCCAATCTAATACA...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTGTTCCCATTCTTCAACAGGAGACTCGAGCAGCTTAACAGTTTTGCTATAAAATGTATTAGATTGGGTTaGAGTCTATTTGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: VFPFFNRRLEQLNSFAIKCIRLG*SLFDRA
Trigger: AGCTCTGTCAAATAGACTCAAACCCAATCTAATACA...TTTTATAGCAAAACTGTTAAGCTGCTCGAGTCTCCTGTTGAAGAATGGGAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp CCGAGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTCAAGACCTGTTAGACTaGGATTATACAAATTGGATG +
Preference number: 5 (lower is better)
Translates to: PRATNTQKLLLALTSSCVQDLLD*DYTNWM
Trigger: CATCCAATTTGTATAATCCAAGTCTAACAGGTCTTG...AACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGTTTTATCTGCTACTTaGCACGATCTCACTTCATGG +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFVLSAT*HDLTSW
Trigger: CCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAAC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCCCCTGCCATTACTTATaGTGGTCATCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIPCHYL*WSSLFD
Trigger: ATCAAACAGTGATGACCACAATAAGTAATGGCAGGG...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCTGTGTTCAGAAACTTaGACAACATGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHLCSET*TTCTLT
Trigger: AGTGAGTGTGCATGTTGTCAAAGTTTCTGAACACAG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAAGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TGGAAAATCTTAATAGTAGTCACTGAACGAAGTCAATCATTCCGAGAGCCACAACACTTTTCTTTGATTTaGGAGGCTTCCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: WKILIVVTERSQSFREPQHFSLI*EASLKK
Trigger: TTTCTTAAGGGAAGCCTCCAAAATCAAAGAAAAGTG...TTGTGGCTCTCGGAATGATTGACTTCGTTCAGTGACTACTATTAAGATTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATAAAAATCGCTATTCATaGGAACAGAACCATTTCCCC +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANKNRYS*EQNHFP
Trigger: GGGGAAATGGTTCTGTTCCAATGAATAGCGATTTTT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAACAGCAGCAGTCATTaGGCCAGGATTTTACCAAAT +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRNSSSH*ARILPN
Trigger: ATTTGGTAAAATCCTGGCCAAATGACTGCTGCTGTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGGCTTAGCTGCACTTTaGCAGTATCATAAACCAAGA +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLGLAAL*QYHKPR
Trigger: TCTTGGTTTATGATACTGCAAAAGTGCAGCTAAGCC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp GTCGTGTTCTACTTCAATTGTTTTTACCAAACCACCACTCACCAAAAGGCATTTCAAGACCTGTTAGACTaGGATTATACAAATTGGATG +
Preference number: 5 (lower is better)
Translates to: VVFYFNCFYQTTTHQKAFQDLLD*DYTNWM
Trigger: CATCCAATTTGTATAATCCAAGTCTAACAGGTCTTG...AAATGCCTTTTGGTGAGTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGGGATGAGTCAGTCCTaGGAAAATCTTAATAGTAGT +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRGMSQS*ENLNSS
Trigger: ACTACTATTAAGATTTTCCAAGGACTGACTCATCCC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFKISGS*TLFILG
Trigger: TCCCAATATGAATAGGGTCAACGACCCACTTATTTT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGTAACTCACTTTTCTTaGATTTTGGAGGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFVTHFS*ILEASL
Trigger: AAGGGAAGCCTCCAAAATCAAAGAAAAGTGAGTTAC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCTCTTAGTAACATCTTaGGGTCCAATGTTAACATGG +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLLVTS*GPMLTW
Trigger: CCATGTTAACATTGGACCCAAAGATGTTACTAAGAG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTCGTGTTCTACTTCAATaGTTTTTACCAAACCACCAC +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFRVLLQ*FLPNHH
Trigger: GTGGTGGTTTGGTAAAAACAATTGAAGTAGAACACG...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTATGGAGCAGATGTTTaGCATACATTAGCTCACATA +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANYGADV*HTLAHI
Trigger: TATGTGAGCTAATGTATGCAAAACATCTGCTCCATA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGCAATGTTCTGTATCTaGATAGAGGTTGCGATAAAG +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFAMFCI*IEVAIK
Trigger: CTTTATCGCAACCTCTATCAAGATACAGAACATTGC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATAGTTGTTTCACAATaGCCTGGTCTTTACATCTCC +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIIVVSQ*PGLYIS
Trigger: GGAGATGTAAAGACCAGGCAATTGTGAAACAACTAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TCACATCTATTTGTTTTTAGCATCATTCCCTTGGCATTACTCAACCCAGCAAATTTGAGGCTTTCAGTCTaGCATCTTTATAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: SHLFVFSIIPLALLNPANLRLSV*HLYSCF
Trigger: GAAACAACTATAAAGATGCAAGACTGAAAGCCTCAA...ATTTGCTGGGTTGAGTAATGCCAAGGGAATGATGCTAAAAACAAATAGATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTGCTGCAATTGCTTCTTaGATAGAGCCATTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFAAIAS*IEPFLK
Trigger: TTTAAGAAATGGCTCTATCAAAGAAGCAATTGCAGC...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000307849.7
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGATCTGGCACAACTTTTaGTATTCAAATGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRIWHNF*YSNAME
Trigger: CTCCATAGCATTTGAATACAAAAAGTTGTGCCAGAT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGAAACTTATTTCAAAGTaGATAGCTGAGAGCACTAGG +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRKLISK*IAESTR
Trigger: CCTAGTGCTCTCAGCTATCAACTTTGAAATAAGTTT...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTCATCTTTCAGTTTTaGTATTACAGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLFIFQF*YYSSFS
Trigger: GGAGAAGCTGCTGTAATACAAAAACTGAAAGATGAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ACAGTATGGATTTATTCCAACATAACTTGTTCTCAAACCACATTTGCTGACATCATCATGTTCAGTTTGTaGTTTCTAGAACCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: TVWIYSNITCSQTTFADIIMFSL*FLEPSE
Trigger: TTCAGAGGGTTCTAGAAACAACAAACTGAACATGAT...GATGTCAGCAAATGTGGTTTGAGAACAAGTTATGTTGGAATAAATCCATACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp TTTAACTATTATAGGCAATGCTTCGGTGAACATGTCTTTTCATGTTTGTGCCATCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: FNYYRQCFGEHVFSCLCHQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...ATGGCACAAACATGAAAAGACATGTTCACCGAAGCATTGCCTATAATAGTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCAACTACTTTTCAATTaGGCCAGCCTTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLQLLFN*ASLLLV
Trigger: TACTAAAAGAAGGCTGGCCAAATTGAAAAGTAGTTG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp AGAGCCACAAACACTCAAAAATTACTGCTAGCATTGACAAGTTCTTGTGTTTTTAATCTAGAGATGACTTaGGCACATATGAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: RATNTQKLLLALTSSCVFNLEMT*AHMKFP
Trigger: GGGAAATTTCATATGTGCCAAAGTCATCTCTAGATT...AAAAACACAAGAACTTGTCAATGCTAGCAGTAATTTTTGAGTGTTTGTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000410026.7
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTTGAGGCTTTCAGTCTaGCATCTTTATAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLLRLSV*HLYSCF
Trigger: GAAACAACTATAAAGATGCAAGACTGAAAGCCTCAA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATTTGGCCAGGATTTTACCAAATACCATTGGGTAAAGGAATGAAATTTCTAAGGTTGAGGCTTTCAGTCTaGCATCTTTATAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: IWPGFYQIPLGKGMKFLRLRLSV*HLYSCF
Trigger: GAAACAACTATAAAGATGCAAGACTGAAAGCCTCAA...CCTTAGAAATTTCATTCCTTTACCCAATGGTATTTGGTAAAATCCTGGCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCTGTATTAGATTGGGTTaGAGTCTATTTGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLCIRLG*SLFDRA
Trigger: AGCTCTGTCAAATAGACTCAAACCCAATCTAATACA...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS-3UTR CAA 90 bp ATGTTCTGTATCTTGATAGAGGTTGCGATAAAGCCTAGGTATTTGTTAAAACTCCAAGACCTGTTAGACTaGGATTATACAAATTGGATG +
Preference number: 5 (lower is better)
Translates to: MFCILIEVAIKPRYLLKLQDLLD*DYTNWM
Trigger: CATCCAATTTGTATAATCCAAGTCTAACAGGTCTTG...GAGTTTTAACAAATACCTAGGCTTTATCGCAACCTCTATCAAGATACAGAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CCA 72 bp TTGGGACAGGCGCGGCTACGGCTGCGGAGACGCGAGTaGGCAGGGCGGGGTCAAAGCTTCCCACCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LGQARLRLRRRE*AGRGQSFPPSR
Trigger: CCGGGAGGGTGGGAAGCTTTGACCCCGCCCTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCTGTCCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS TCA 72 bp CCCAGCCTGTCCCGGGCTCCGGGAAGGAACGGGCTGTaGCAGCGAAACGGGAGCGGAGACAGAACACCGCAC +
Preference number: 6 (lower is better)
Translates to: PSLSRAPGRNGL*QRNGSGDRTPH
Trigger: GTGCGGTGTTCTGTCTCCGCTCCCGTTTCGCTGTCACAGCCCGTTCCTTCCCGGAGCCCGGGACAGGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000410026.7
ENST00000425611.9
ENST00000451500.5
ENST00000462712.5
ENST00000491331.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CCA 72 bp CTGCTACTTTGCACGATCTCACTTCATGGCCGTCTTTaGTTTTGGTCACGCGTCACGGGCGCGCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LLLCTISLHGRL*FWSRVTGARPA
Trigger: GGCTGGGCGCGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000462712.5
ENST00000491331.5
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS CAA 72 bp ACTTTGCACGATCTCACTTCATGGCCGTCTTTGGTTTaGGTCACGCGTCACGGGCGCGCGCCCAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: TLHDLTSWPSLV*VTRHGRAPSLS
Trigger: GGACAGGCTGGGCGCGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000462712.5
ENST00000491331.5
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS CAA 72 bp TCTGCTACTTTGCACGATCTCACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCACGGGCGCGCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SATLHDLTSWPS*VLVTRHGRAPS
Trigger: GCTGGGCGCGCGCCCGTGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307834.9
ENST00000410026.7
ENST00000462712.5
ENST00000491331.5
ENST00000674187.1
ENST00000674360.1
ENST00000674406.1
CDS CAA 72 bp CTTATAAAAATAAGTGGGTCGTTGACCCTATTCATATaGGGACAGGCGCGGCTACGGCTGCGGAGACGCGAG +
Preference number: 6 (lower is better)
Translates to: LIKISGSLTLFI*GQARLRLRRRE
Trigger: CTCGCGTCTCCGCAGCCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAACGACCCACTTATTTTTATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CAA 90 bp TTAATATCTCTTATAAAAATAAGTGGGTCGTTGACCCTATTCATATaGGGACAGGCGCGGCTACGGCTGCGGAGACGCGAGTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LISLIKISGSLTLFI*GQARLRLRRREWAG
Trigger: CCCTGCCCACTCGCGTCTCCGCAGCCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAACGACCCACTTATTTTTATAAGAGATATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CAA 90 bp GTCCCCGGCCATTGCTTCTGCCAGCATGTGAAAACTGGTGTTCCCTaGATTCAGGGCCAGTGTGAACACCATTTCCTGTACCCATATTAC +
Preference number: 6 (lower is better)
Translates to: VPGHCFCQHVKTGVP*IQGQCEHHFLYPYY
Trigger: GTAATATGGGTACAGGAAATGGTGTTCACACTGGCCCTGAATCAAGGGAACACCAGTTTTCACATGCTGGCAGAAGCAATGGCCGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435931.1
CDS CCA 72 bp GGATGCATACCCTCTGGTCAACCGAATAATATCCCCTaGCTGTATAAGACCTCCGATCTCATCCCACACGGA +
Preference number: 6 (lower is better)
Translates to: GCIPSGQPNNIP*LYKTSDLIPHG
Trigger: TCCGTGTGGGATGAGATCGGAGGTCTTATACAGCCAGGGGATATTATTCGGTTGACCAGAGGGTATGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000409510.5
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000462712.5
ENST00000491331.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CAA 90 bp TCATCCCACACGGAAATAGTGATGCTGCCCGTTTTATCTGCTACTTaGCACGATCTCACTTCATGGCCGTCTTTGGTTTTGGTCACGCGT +
Preference number: 6 (lower is better)
Translates to: SSHTEIVMLPVLSAT*HDLTSWPSLVLVTR
Trigger: ACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGCATCACTATTTCCGTGTGGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000409510.5
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000462712.5
ENST00000491331.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS CAA 72 bp ACTTTGCACGATCTCACTTCATGGCCGTCTTTGGTTTaGGTCACGCGTCCTATCTCCAGGACAATAAAGACG +
Preference number: 6 (lower is better)
Translates to: TLHDLTSWPSLV*VTRPISRTIKT
Trigger: CGTCTTTATTGTCCTGGAGATAGGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CAA 72 bp TCTGCTACTTTGCACGATCTCACTTCATGGCCGTCTTaGGTTTTGGTCACGCGTCCTATCTCCAGGACAATA +
Preference number: 6 (lower is better)
Translates to: SATLHDLTSWPS*VLVTRPISRTI
Trigger: TATTGTCCTGGAGATAGGACGCGTGACCAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CAA 90 bp TTTTTCAGTCCGGGCTTAATATCTCTTATAAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGACAGGCGCGGCTACGGCTGCGGAGA +
Preference number: 6 (lower is better)
Translates to: FFSPGLISLIKISGS*TLFILGQARLRLRR
Trigger: TCTCCGCAGCCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAACGACCCACTTATTTTTATAAGAGATATTAAGCCCGGACTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CAA 72 bp CCGGGCTTAATATCTCTTATAAAAATAAGTGGGTCGTaGACCCTATTCATATTGGGACAGGCGCGGCTACGG +
Preference number: 6 (lower is better)
Translates to: PGLISLIKISGS*TLFILGQARLR
Trigger: CCGTAGCCGCGCCTGTCCCAATATGAATAGGGTCAACGACCCACTTATTTTTATAAGAGATATTAAGCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307849.7
ENST00000425611.9
ENST00000451500.5
ENST00000674172.1
ENST00000674262.1
ENST00000674414.1
CDS CAA 72 bp ACGGAAATAGTGATGCTGCCCGTTTTATCTGCTACTTaGCACGATCTCACTTCATGGCCGTCTTTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: TEIVMLPVLSAT*HDLTSWPSLVL
Trigger: CAAAACCAAAGACGGCCATGAAGTGAGATCGTGCAAAGTAGCAGATAAAACGGGCAGCATCACTATTTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000307834.9
ENST00000307849.7
ENST00000409510.5
ENST00000410026.7
ENST00000425611.9
ENST00000435931.1
ENST00000451500.5
ENST00000462712.5
ENST00000491331.5
ENST00000674172.1
ENST00000674187.1
ENST00000674262.1
ENST00000674360.1
ENST00000674406.1
ENST00000674414.1
CDS TCA 72 bp ACTGACCCTGACAAAGAGCAGTCATTAAGAAATGAGTaGCCTCTAACGGTTTTTCACGTAACTGACCTCCAT +
Preference number: 6 (lower is better)
Translates to: TDPDKEQSLRNE*PLTVFHVTDLH
Trigger: ATGGAGGTCAGTTACGTGAAAAACCGTTAGAGGTCACTCATTTCTTAATGACTGCTCTTTGTCAGGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462712.5
CDS TCA 72 bp GACCTCCATTATTATCAACACCTCTGTATGAATACATaGAGGTCAGGACAGAATCCTGAACCTTTCAGTAAC +
Preference number: 6 (lower is better)
Translates to: DLHYYQHLCMNT*RSGQNPEPFSN
Trigger: GTTACTGAAAGGTTCAGGATTCTGTCCTGACCTTCATGTATTCATACAGAGGTGTTGATAATAATGGAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462712.5