RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166886

Ensembl transcript IDs: ENST00000300131.8, ENST00000342556.6, ENST00000554718.1, ENST00000554839.1, ENST00000555857.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTCAGATAGGTGCTGCGGTCCAGCCCCCAGCTGGAGGAGACCCTaGGTCCAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCA +
Preference number: 1 (lower is better)
Translates to: CSDRCCGPAPSWRRP*VQPRPPEGASEGIP
Trigger: TGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTGGACTCAGGGTCTCCTCCAGCTGGGGGCTGGACCGCAGCACCTATCTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR CCA 90 bp CCCCCTTTCCCCCTTGTCCAAACTGAGTCCAACTGCTCACACCACTaGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: PPFPLVQTESNCSHH*CKPKENGSVLCEGG
Trigger: CCCTCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGGGAAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR GCA 90 bp TCCCAGGGAAGTCCCCCTTTCCCCCTTGTCCAAACTGAGTCCAACTaGTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTG +
Preference number: 1 (lower is better)
Translates to: SQGSPPFPLVQTESN*SHHWCKPKENGSVL
Trigger: CAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGGGAAAGGGGGACTTCCCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCGCTCTGGGCAGGGGTaGGGGCACCACGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRRSGQG*GHHAPS
Trigger: GGAGGGTGCGTGGTGCCCTCACCCCTGCCCAGAGCG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAGCGTGGGGGTCTGTGTaGGCCAGAAGTCTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLAWGSV*ARSLRS
Trigger: GGACCTCAGACTTCTGGCTCACACAGACCCCCACGC...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGCGTGGGGGTCTGTGTaGGCCAGAAGTCTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYAWGSV*ARSLRS
Trigger: GGACCTCAGACTTCTGGCTCACACAGACCCCCACGC...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGAAACCCCAGATGCCCTaGAGGCAGAGTCCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRKPQMP*RQSPCP
Trigger: GGGGCAAGGACTCTGCCTCCAGGGCATCTGGGGTTT...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACCCCCTTGTCCAAACTaGGTCCAACTGCTCACACCA +
Preference number: 2 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLPPCPN*VQLLTP
Trigger: TGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGGG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGACTAGATTCCGGGGATaGAGAGCGTGGGGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRTRFRG*RAWGSV
Trigger: CACAGACCCCCACGCTCTCCATCCCCGGAATCTAGT...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATACTAGATTCCGGGGATaGAGAGCGTGGGGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYTRFRG*RAWGSV
Trigger: CACAGACCCCCACGCTCTCCATCCCCGGAATCTAGT...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACCCCCTTGTCCAAACTaGGTCCAACTGCTCACACCA +
Preference number: 2 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVPPCPN*VQLLTP
Trigger: TGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGGG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAGTTGCCACTTTTAGCTaGACCTTCCCAGGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLVATFS*TFPGKS
Trigger: GGACTTCCCTGGGAAGGTCCAGCTAAAAGTGGCAAC...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCCAGGCCCCCAATTCTaGGGGCAAATGTTGCCACTT +
Preference number: 2 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYPGPQF*GQMLPL
Trigger: AAGTGGCAACATTTGCCCCCAGAATTGGGGGCCTGG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGGGGATAGATGGGAATaGGAGGGCAAACTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRGDRWE*EGKLQH
Trigger: GTGCTGCAGTTTGCCCTCCCATTCCCATCTATCCCC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAGACTTGGGGGATAGATaGGAATGGGAGGGCAAACTG +
Preference number: 2 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLDLGDR*EWEGKL
Trigger: CAGTTTGCCCTCCCATTCCCATCTATCCCCCAAGTC...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTGCTTGTTATTGCTTaGAGCCCCACAGTCTTATGC +
Preference number: 2 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLLVIA*SPTVLC
Trigger: GCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATTGCTCACACCACTGGTaGAAACCTAAAGAGAATGGG +
Preference number: 2 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYCSHHW*KPKENG
Trigger: CCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAAAACCCCAGATGCCCTaGAGGCAGAGTCCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGKPQMP*RQSPCP
Trigger: GGGGCAAGGACTCTGCCTCCAGGGCATCTGGGGTTT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCGCTCTGGGCAGGGGTaGGGGCACCACGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: MGGQTAALVKLIKETNQKRSGQG*GHHAPS
Trigger: GGAGGGTGCGTGGTGCCCTCACCCCTGCCCAGAGCG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGTGTGAGCCAGAAGTCTaGGGTCCTGGGTCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQCEPEV*GPGSED
Trigger: GTCTTCAGACCCAGGACCTCAGACTTCTGGCTCACA...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAAAGGATCCAGGGTTGTaGCTAGATTCCGGGGATGGA +
Preference number: 2 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGKDPGL*LDSGDG
Trigger: TCCATCCCCGGAATCTAGTCACAACCCTGGATCCTT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGAAGGATCCAGGGTTGTaGCTAGATTCCGGGGATGGA +
Preference number: 2 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEKDPGL*LDSGDG
Trigger: TCCATCCCCGGAATCTAGTCACAACCCTGGATCCTT...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR GCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACTCTCTCCAGGCCTCTaGTTGTTATTGCTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGLSPGL*LLLLEA
Trigger: GGCTTCAAGCAATAACAAGCAGAGGCCTGGAGAGAG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR TCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGCTGCTTGTTATTGCTTaGAGCCCCACAGTCTTATGC +
Preference number: 2 (lower is better)
Translates to: NCSHHWCKPKENGSVLCELLVIA*SPTVLC
Trigger: GCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAG...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGTGCTCACACCACTGGTaGAAACCTAAAGAGAATGGG +
Preference number: 2 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQCSHHW*KPKENG
Trigger: CCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGCAAACTGAGTCCAACTaGTCACACCACTGGTGCAAA +
Preference number: 2 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQQTESN*SHHWCK
Trigger: TTTGCACCAGTGGTGTGAGCAGTTGGACTCAGTTTG...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCTCTCTCCAGGCCTCTaGTTGTTATTGCTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: MGGQTAALVKLIKETNQKLSPGL*LLLLEA
Trigger: GGCTTCAAGCAATAACAAGCAGAGGCCTGGAGAGAG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGGCCTCTGCTTGTTATTaGTTGAAGCCCCACAGTCTT +
Preference number: 2 (lower is better)
Translates to: MGGQTAALVKLIKETNQKASACY*LKPHSL
Trigger: AAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGC...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGAACTGCTCACACCACTaGTGCAAACCTAAAGAGAAT +
Preference number: 2 (lower is better)
Translates to: MGGQTAALVKLIKETNQKNCSHH*CKPKEN
Trigger: ATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CAA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACTGGAGGCAGAGTCCTaGCCCCCTCGCTCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLLEAES*PPRSGQ
Trigger: CTGCCCAGAGCGAGGGGGCAAGGACTCTGCCTCCAG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR TCA 72 bp AGGTGCTGCGGTCCAGCCCCCAGCTGGAGGAGACCCTaGGTCCAACCCAGGCCTCCCGAGGGGGCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: RCCGPAPSWRRP*VQPRPPEGASE
Trigger: TTCACTGGCCCCCTCGGGAGGCCTGGGTTGGACTCAGGGTCTCCTCCAGCTGGGGGCTGGACCGCAGCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CAA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATTTCTGGGGGCAAATGTaGCCACTTTTAGCTGGACCT +
Preference number: 3 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYFWGQM*PLLAGP
Trigger: AGGTCCAGCTAAAAGTGGCAACATTTGCCCCCAGAA...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CAA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTGCTTGTTATTGCTaGAAGCCCCACAGTCTTATG +
Preference number: 3 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLSACYC*KPHSLM
Trigger: CATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGA...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CAA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTATCTGCTTGTTATTGCTaGAAGCCCCACAGTCTTATG +
Preference number: 3 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVSACYC*KPHSLM
Trigger: CATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGA...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR-3UTR CAA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGGCCTCTGCTTGTTATaGCTTGAAGCCCCACAGTCT +
Preference number: 3 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGGLCLL*LEAPQS
Trigger: AGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR CCA 72 bp CCCCTTGTCCAAACTGAGTCCAACTGCTCACACCACTaGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGT +
Preference number: 3 (lower is better)
Translates to: PLVQTESNCSHH*CKPKENGSVLC
Trigger: ACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
3UTR GCA 72 bp CTTGTCCAAACTGAGTCCAACTGCTCACACCACTGGTaGAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAG +
Preference number: 3 (lower is better)
Translates to: LVQTESNCSHHW*KPKENGSVLCE
Trigger: CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTTGGACTCAGTTTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACCGGCGCTCGGCGCCTaGTGCGTGCTGCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLPALGA*CVLPSS
Trigger: GGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGCGCTCGGCGCCTGCTaGGTGCTGCCCTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRALGAC*VLPSSP
Trigger: CGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACTCGGGCACTGGGCTTaGGTCTGGGCTGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLLGHWA*VWAAGS
Trigger: GGACCCTGCAGCCCAGACTCAAGCCCAGTGCCCGAG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCCCGAGGGGGCCAGTaGAGGGATCCCACACCCACC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLSRGGQ*RDPTPT
Trigger: GGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGA...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGGAGATCACCCGGGCTaGCCTTCTCGGTGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRGDHPG*PSRCPA
Trigger: CGCCGGGCACCGAGAAGGGCAGCCCGGGTGATCTCC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACAGCGTCCGAGGCAGTaGCATGGCTCGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLQRPRQ*HGSGTG
Trigger: CCCAGTGCCCGAGCCATGGCACTGCCTCGGACGCTG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTGGAGTGCTCCGGCCTaGCCAGATCCGGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRWSAPA*PDPGVP
Trigger: GGGGACCCCCGGATCTGGCCAGGCCGGAGCACTCCA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTCGGGCACTGGGCTTaGGTCTGGGCTGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLGHWA*VWAAGS
Trigger: GGACCCTGCAGCCCAGACTCAAGCCCAGTGCCCGAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACCCGCCTCACACAGCTaGTGCACGTCGTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVPASHS*CTSSPP
Trigger: GGGAGGGGACGACGTGCAGCAGCTGTGTGAGGCGGG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGAGCTGGAGGAGACCCTaGGTCCAACCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRSWRRP*VQPRPP
Trigger: GGGAGGCCTGGGTTGGACTCAGGGTCTCCTCCAGCT...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCTTCCCCGCGCACGATaGCGTGTCCACCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRLPRAR*RVHRCP
Trigger: TGGACAGCGGTGGACACGGCATCGTGCGCGGGGAAG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGCCTCACACAGCTGCTaGACGTCGTCCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRASHSC*TSSPPC
Trigger: GCAGGGAGGGGACGACGTGCAGCAGCTGTGTGAGGC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGGCCCACTCTCTCAGTaGCTTCTGCAGGCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYGPLSQ*LLQAPD
Trigger: GTCCGGCGCCTGCAGAAGGCACTGAGAGAGTGGGCC...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTTTCACGCTGCTCCTaGGACCCTCCACCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLSRCS*DPPPAR
Trigger: CCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACCCAACGTCCGACTCTaGAGTGCTCCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVPNVRL*SAPAWP
Trigger: TGGCCAGGCCGGAGCACTCCAGAGTCGGACGTTGGG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTCCACCAGCGCGGGATaGGGTCCTGGGGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRSTSAG*GPGAGH
Trigger: ATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGGGGAAGGCGCTCTGTaGATGGACGGCCGGAGATCA +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRGEGAL*MDGRRS
Trigger: TGATCTCCGGCCGTCCATGCACAGAGCGCCTTCCCC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAGGCTGCCATGCCCATTaGTCATGCTCCCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLGCHAH*SCSLSG
Trigger: CCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCC...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCGGCTCCATAGCCCATaGGCTGGCAATGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRRLHSP*AGNARG
Trigger: GCCTCTGGCATTGCCAGCCCATGGGCTATGGAGCCG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAACCCTCACTGCCGGCTaGCCTCAGCCTCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLTLTAG*PQPPLS
Trigger: TGAAAGTGGAGGCTGAGGCCAGCCGGCAGTGAGGGT...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACATGCCCATTGCTCATaGTCCCTTTCCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLHAHCS*SLSGYP
Trigger: CGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCTGCCATGCCCATTaGTCATGCTCCCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVGCHAH*SCSLSG
Trigger: CCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCC...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCTCCTCTTCTCCTCCTaGCCCAACGTCCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRLLFSS*PNVRLW
Trigger: CCAGAGTCGGACGTTGGGGCAGGAGGAGAAGAGGAG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTCCTCTTCTCCTCCTaGCCCAACGTCCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLLFSS*PNVRLW
Trigger: CCAGAGTCGGACGTTGGGGCAGGAGGAGAAGAGGAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCCTCCACTTTCACGCTaGTCCTGCGACCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRPPLSR*SCDPPP
Trigger: TGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTCAGTCCAACCCTCACTaGCGGCTGGCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGQSNPH*RLASAS
Trigger: GGAGGCTGAGGCCAGCCGGCAGTGAGGGTTGGACTG...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATAACTGCTCAGATAGGTaGTGCGGTCCAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYNCSDR*CGPAPS
Trigger: GCTGGGGGCTGGACCGCAGCACCTATCTGAGCAGTT...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGAGTAGGAAAGGAGGTTaGCGCGCTGCAGGACCCGGT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRSRKGG*RAAGPG
Trigger: ACCGGGTCCTGCAGCGCGCCAACCTCCTTTCCTACT...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGCCTGCCTTTTCCCCTaGGCTGCCATGCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYACLFP*AAMPIA
Trigger: AGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGC...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAATAGGACTCAGGGCCTaGGGGAGGCTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLIGLRA*GRLLDF
Trigger: GAAATCCAGCAGCCTCCCCCAGGCCCTGAGTCCTAT...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTGTCCTCCTCCAGGCTaGGGCGGTATGGGGGTACAT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRCPPPG*GGMGVH
Trigger: ATGTACCCCCATACCGCCCCAGCCTGGAGGAGGACA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAACTAGATTCCGGGGATaGAGAGCGTGGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLTRFRG*RAWGSV
Trigger: CACAGACCCCCACGCTCTCCATCCCCGGAATCTAGT...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTGAGGTCCTGGGTCTaGAGACACCAGTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLRSWV*RHQSNP
Trigger: AGGGTTGGACTGGTGTCTTCAGACCCAGGACCTCAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTATTGATGGTGAGCTCGTaGAGGCTGAGCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVLMVSS*RLSCLP
Trigger: GGGCAAGCAGCTCAGCCTGCACGAGCTCACCATCAA...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTTGATGGTGAGCTCGTaGAGGCTGAGCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRLMVSS*RLSCLP
Trigger: GGGCAAGCAGCTCAGCCTGCACGAGCTCACCATCAA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCGTCCATCAGTGTCTaGTGCAGGATGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLSSISV*CRMCRL
Trigger: GAGCCGACACATCCTGCAGCAGACACTGATGGACGA...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGGGAACAGCAGGCACTaGTTGACTGAAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRGNSRH*LTEEPW
Trigger: CCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTTCCC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACATGCGTACCATCTCTaGCTCCAGTCGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVHAYHL*LQSVWT
Trigger: GGTCCAGACCGACTGGAGCCAGAGATGGTACGCATG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACTCTCTCGGGCTACTTaGCGGGACAAAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLLSRAT*RDKEKS
Trigger: GCTCTTCTCTTTGTCCCGCCAAGTAGCCCGAGAGAG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAACTAGATTCCGGGGATaGAGAGCGTGGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVTRFRG*RAWGSV
Trigger: CACAGACCCCCACGCTCTCCATCCCCGGAATCTAGT...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAACAGCAGGCACTGGTTaGCTGAAGAGCCCTGGATTG +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVTAGTG*LKSPGL
Trigger: CAATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGT...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTATGTGAGCCAGAAGTCTaGGGTCCTGGGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVCEPEV*GPGSED
Trigger: GTCTTCAGACCCAGGACCTCAGACTTCTGGCTCACA...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATTCCATCTCAAAGATGTaGCCAACGCTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYSISKM*PTLRAS
Trigger: GCTGGCACGGAGCGTTGGGCACATCTTTGAGATGGA...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTATCCATCTCAAAGATGTaGCCAACGCTCCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVSISKM*PTLRAS
Trigger: GCTGGCACGGAGCGTTGGGCACATCTTTGAGATGGA...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTAACTGCTCAGATAGGTaGTGCGGTCCAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGNCSDR*CGPAPS
Trigger: GCTGGGGGCTGGACCGCAGCACCTATCTGAGCAGTT...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTGCCTGCCTTTTCCCCTaGGCTGCCATGCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGACLFP*AAMPIA
Trigger: AGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGC...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTTCAGGGTGAAGCCTaGAGCCCTTCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLQGEA*SPSRRT
Trigger: TGTCCTCCTTGAAGGGCTCCAGGCTTCACCCTGAAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTCAGGCTGGGGCGGTATaGGGGTACATAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGQAGAV*GYIGLR
Trigger: CCTGAGTCCTATGTACCCCCATACCGCCCCAGCCTG...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCCCCTCCCTGCTGGATaGAGGTCTCATAGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRPLPAG*RSHSRK
Trigger: TTTCCTACTATGAGACCTTCATCCAGCAGGGAGGGG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCAGTCTCAGAGATCTTaGAGAGCGGGATGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRQSQRS*RAGCWR
Trigger: TCTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTCCCAGTTCTTCAGGGTaGAGCCTGGAGCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGPSSSG*SLEPFK
Trigger: CTTGAAGGGCTCCAGGCTTCACCCTGAAGAACTGGG...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTCCTTTTCCCCTGGGCTaGCATGCCCATTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGPFPLG*HAHCSC
Trigger: GCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGG...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCACTTTCCACCACCATaGGTACCATCTCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYHFPPP*VPSLAP
Trigger: TGGAGCCAGAGATGGTACGCATGGTGGTGGAAAGTG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACACTTTCCACCACCATaGGTACCATCTCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVHFPPP*VPSLAP
Trigger: TGGAGCCAGAGATGGTACGCATGGTGGTGGAAAGTG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGTGCCCAACGCTCCGTaGCAGCTTCTTATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRVPNAP*QLLIQL
Trigger: AAGCTGAATAAGAAGCTGGCACGGAGCGTTGGGCAC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCATGACCCCACAGCCTaGAAATGTCCATCCAGACTC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRHDPTA*KCPSRL
Trigger: GAGTCTGGATGGACATTTGCAGGCTGTGGGGTCATG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTCCATCAGTGTCTGCTaGAGGATGTGTCGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRSISVC*RMCRLH
Trigger: ATGGAGCCGACACATCCTGCAGCAGACACTGATGGA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR GCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACTCTCTCCAGGCCTCTaGTTGTTATTGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLLSPGL*LLLLEA
Trigger: GGCTTCAAGCAATAACAAGCAGAGGCCTGGAGAGAG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTGGGAACAGCAGGCACTaGTTGACTGAAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGGNSRH*LTEEPW
Trigger: CCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTTCCC...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGACTTGGGGGATAGATaGGAATGGGAGGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRDLGDR*EWEGKL
Trigger: CAGTTTGCCCTCCCATTCCCATCTATCCCCCAAGTC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACGCTCTGGGCAGGGGTaGGGGCACCACGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGRSGQG*GHHAPS
Trigger: GGAGGGTGCGTGGTGCCCTCACCCCTGCCCAGAGCG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACCGGCGCTCGGCGCCTaGTGCGTGCTGCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGPALGA*CVLPSS
Trigger: GGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACTCTCTCCAGGCCTCTaGTTGTTATTGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVLSPGL*LLLLEA
Trigger: GGCTTCAAGCAATAACAAGCAGAGGCCTGGAGAGAG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGGAAAGACGCTCTAACTaGTCAGATAGGTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRERRSN*SDRCCG
Trigger: ACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTC...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCCTTCCTCGAACTCCTaGAAATGTCCATCCAGACTC +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRPSSNS*KCPSRL
Trigger: GAGTCTGGATGGACATTTGCAGGAGTTCGAGGAAGG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342556.6
CDS-3UTR CCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTGGGGATAGATGGGAATaGGAGGGCAAACTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGGDRWE*EGKLQH
Trigger: GTGCTGCAGTTTGCCCTCCCATTCCCATCTATCCCC...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTAAGGATCCAGGGTTGTaGCTAGATTCCGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGKDPGL*LDSGDG
Trigger: TCCATCCCCGGAATCTAGTCACAACCCTGGATCCTT...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAGGCTTGAGTCTGGGCTaGAGGGTCCGGCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGGLSLG*RVRRAL
Trigger: CAGCGCCCGCCGGACCCTGCAGCCCAGACTCAAGCC...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGCCTCTGCTTGTTATTaGTTGAAGCCCCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYASACY*LKPHSL
Trigger: AAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGC...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTATGCTCACACCACTGGTaGAAACCTAAAGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVCSHHW*KPKENG
Trigger: CCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACAGCGTCCGAGGCAGTaGCATGGCTCGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGQRPRQ*HGSGTG
Trigger: CCCAGTGCCCGAGCCATGGCACTGCCTCGGACGCTG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAGCGGCTGCTCGGCTGTaGGGGAAGGCGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGAAARL*GKALCA
Trigger: TGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGC...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTAATCTCCTCTTCCTTCTaGCTGTCATTATCATCCATC +
Preference number: 4 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLISSSF*LSLSSI
Trigger: GATGGATGATAATGACAGCCAGAAGGAAGAGGAGAT...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTCGAAACGGCCATAGATaGTGCTGTATTTGCGGATCT +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGRNGHR*CCICGS
Trigger: AGATCCGCAAATACAGCATCATCTATGGCCGTTTCG...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGGCGCCTGCTGCGTGCTaGCCTCTTCCCCGCGCACGA +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQAPAAC*PLPRAR
Trigger: TCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGC...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGATCACCCGGGCTaGCCTTCTCGGTGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEGDHPG*PSRCPA
Trigger: CGCCGGGCACCGAGAAGGGCAGCCCGGGTGATCTCC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGCTTGAGTCTGGGCTaGAGGGTCCGGCGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEGLSLG*RVRRAL
Trigger: CAGCGCCCGCCGGACCCTGCAGCCCAGACTCAAGCC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAAGGACCCGGTACAGCTaGAGCTCCCCCAGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGRTRYS*SSPSVR
Trigger: TCGGACGCTGGGGGAGCTGCAGCTGTACCGGGTCCT...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAGCCTCACACAGCTGCTaGACGTCGTCCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGASHSC*TSSPPC
Trigger: GCAGGGAGGGGACGACGTGCAGCAGCTGTGTGAGGC...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAACTGCGGGCACTGCCTaGCTTTTCCCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGTAGTA*LFPWAA
Trigger: GGCAGCCCAGGGGAAAAGGCAGGCAGTGCCCGCAGT...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGATGCAGGCGCCGGACATaGAGGGGCTTGGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGCRRRT*RGLVAM
Trigger: CATGGCCACCAAGCCCCTCCATGTCCGGCGCCTGCA...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACGCGGGATGGGGTCCTaGGGCAGGACATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGRGMGS*GRTSVQ
Trigger: CTGGACAGATGTCCTGCCCCAGGACCCCATCCCGCG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGAACTGCTCACACCACTaGTGCAAACCTAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRNCSHH*CKPKEN
Trigger: ATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAGCGTGGGGGTCTGTGTaGGCCAGAAGTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGAWGSV*ARSLRS
Trigger: GGACCTCAGACTTCTGGCTCACACAGACCCCCACGC...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGTCCCGAGGGGGCCAGTaGAGGGATCCCACACCCACC +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQSRGGQ*RDPTPT
Trigger: GGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGA...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACTACTGTACACAATCTaGAAAGAAAGACGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVLLYTI*KERRSN
Trigger: GTTAGAGCGTCTTTCTTTTCAGATTGTGTACAGTAG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGGCCCACTCTCTCAGTaGCTTCTGCAGGCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGGPLSQ*LLQAPD
Trigger: GTCCGGCGCCTGCAGAAGGCACTGAGAGAGTGGGCC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACGTCCGACTCTGGAGTaGTCCGGCCTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGRPTLE*SGLARS
Trigger: GGATCTGGCCAGGCCGGAGCACTCCAGAGTCGGACG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGATCGTGCAGGCTGAGCTaGTTGCCCTCCCGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGSCRLS*LPSRRL
Trigger: TAAGCGGCGGGAGGGCAAGCAGCTCAGCCTGCACGA...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACCCATGGGCTGGCAATaGCAGAGGCAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGPMGWQ*QRQVSR
Trigger: CCTGCTGACCTGCCTCTGGCATTGCCAGCCCATGGG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR CCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGCGGCTGCTCGGCTGTaGGGGAAGGCGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEAAARL*GKALCA
Trigger: TGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGAGCTGGAGGAGACCCTaGGTCCAACCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCESWRRP*VQPRPP
Trigger: GGGAGGCCTGGGTTGGACTCAGGGTCTCCTCCAGCT...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGAGGACCCGGTACAGCTaGAGCTCCCCCAGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQRTRYS*SSPSVR
Trigger: TCGGACGCTGGGGGAGCTGCAGCTGTACCGGGTCCT...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGAGGAGGTTGGCGCGCTaGAGGACCCGGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCERRLAR*RTRYSC
Trigger: GCAGCTGTACCGGGTCCTGCAGCGCGCCAACCTCCT...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGAGGAGGTTGGCGCGCTaGAGGACCCGGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQRRLAR*RTRYSC
Trigger: GCAGCTGTACCGGGTCCTGCAGCGCGCCAACCTCCT...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGACTGCGGGCACTGCCTaGCTTTTCCCCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQTAGTA*LFPWAA
Trigger: GGCAGCCCAGGGGAAAAGGCAGGCAGTGCCCGCAGT...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGCTTTCACGCTGCTCCTaGGACCCTCCACCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQLSRCS*DPPPAR
Trigger: CCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAAG...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGCAGTCCAACCCTCACTaGCGGCTGGCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQQSNPH*RLASAS
Trigger: GGAGGCTGAGGCCAGCCGGCAGTGAGGGTTGGACTG...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAAAGGCGCTCTGTGCATaGACGGCCGGAGATCACCCG +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGKALCA*TAGDHP
Trigger: CGGGTGATCTCCGGCCGTCCATGCACAGAGCGCCTT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGCCCAACGTCCGACTCTaGAGTGCTCCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQPNVRL*SAPAWP
Trigger: TGGCCAGGCCGGAGCACTCCAGAGTCGGACGTTGGG...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTATCTCCTCTTCCTTCTaGCTGTCATTATCATCCATC +
Preference number: 4 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGISSSF*LSLSSI
Trigger: GATGGATGATAATGACAGCCAGAAGGAAGAGGAGAT...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGATGTCCTCCTCCAGGCTaGGGCGGTATGGGGGTACAT +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGCPPPG*GGMGVH
Trigger: ATGTACCCCCATACCGCCCCAGCCTGGAGGAGGACA...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGTCCACCAGCGCGGGATaGGGTCCTGGGGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQSTSAG*GPGAGH
Trigger: ATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGA...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACAGGCACTGGTTGACTaGAGAGCCCTGGATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGQALVD*RALDWW
Trigger: CCACCAATCCAGGGCTCTTCAGTCAACCAGTGCCTG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACGTCAGCCTTGGACATaGCCCCACAGCCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGRQPWT*PHSLQM
Trigger: CATTTGCAGGCTGTGGGGTCATGTCCAAGGCTGACG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACTGAGGTCCTGGGTCTaGAGACACCAGTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGLRSWV*RHQSNP
Trigger: AGGGTTGGACTGGTGTCTTCAGACCCAGGACCTCAG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGAAGGCGCTCTGTGCATaGACGGCCGGAGATCACCCG +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQKALCA*TAGDHP
Trigger: CGGGTGATCTCCGGCCGTCCATGCACAGAGCGCCTT...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACAGGCTGGGGCGGTATaGGGGTACATAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGQAGAV*GYIGLR
Trigger: CCTGAGTCCTATGTACCCCCATACCGCCCCAGCCTG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGAACTCTGCGAGAGGTaGCTTCGCAGGCACACAGGG +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGELCER*LRRHTG
Trigger: CCCTGTGTGCCTGCGAAGCCACCTCTCGCAGAGTTC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAACCCTCACTGCCGGCTaGCCTCAGCCTCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGTLTAG*PQPPLS
Trigger: TGAAAGTGGAGGCTGAGGCCAGCCGGCAGTGAGGGT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACAGGCACTGGTTGACTaGAGAGCCCTGGATTGGTGG +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGQALVD*RALDWW
Trigger: CCACCAATCCAGGGCTCTTCAGTCAACCAGTGCCTG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACCCAGTTCTTCAGGGTaGAGCCTGGAGCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGPSSSG*SLEPFK
Trigger: CTTGAAGGGCTCCAGGCTTCACCCTGAAGAACTGGG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGTCCCCTGGGCTGCCATaGCCATTGCTCATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQSPGLP*PLLMLP
Trigger: AGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGA...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGCGTGTTGTCCCTCATaGAGAACTGGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGACCPS*RTGQQP
Trigger: AGGCTGCTGCCCAGTTCTGCATGAGGGACAACACGC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGCCTCCACTTTCACGCTaGTCCTGCGACCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEPPLSR*SCDPPP
Trigger: TGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGG...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAAGAGCCCTGGATTGGTaGCCCACTCTCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGRALDW*PTLSVP
Trigger: AGGCACTGAGAGAGTGGGCCACCAATCCAGGGCTCT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGACAGTCTCAGAGATCTTaGAGAGCGGGATGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGQSQRS*RAGCWR
Trigger: TCTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTG...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCAGGCACACAGGGGCTaGGGCGGCCCACGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKQAHRG*GGPRGR
Trigger: ACGACCGCGTGGGCCGCCTCAGCCCCTGTGTGCCTG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS-3UTR TCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACCCCCTTGTCCAAACTaGGTCCAACTGCTCACACCA +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGPPCPN*VQLLTP
Trigger: TGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGGG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGCATGCCCATTGCTCATaGTCCCTTTCCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEHAHCS*SLSGYP
Trigger: CGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATG...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGCCTTTTCCCCTGGGCTaGCATGCCCATTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEPFPLG*HAHCSC
Trigger: GCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGG...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGCGTGTTGTCCCTCATaGAGAACTGGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEACCPS*RTGQQP
Trigger: AGGCTGCTGCCCAGTTCTGCATGAGGGACAACACGC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGAGAGCCCTGGATTGGTaGCCCACTCTCTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCERALDW*PTLSVP
Trigger: AGGCACTGAGAGAGTGGGCCACCAATCCAGGGCTCT...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGCATGCGTACCATCTCTaGCTCCAGTCGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQHAYHL*LQSVWT
Trigger: GGTCCAGACCGACTGGAGCCAGAGATGGTACGCATG...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACTTCAGGGTGAAGCCTaGAGCCCTTCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGLQGEA*SPSRRT
Trigger: TGTCCTCCTTGAAGGGCTCCAGGCTTCACCCTGAAG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACCAGGCCCCCAATTCTaGGGGCAAATGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGPGPQF*GQMLPL
Trigger: AAGTGGCAACATTTGCCCCCAGAATTGGGGGCCTGG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGGGGATAGATGGGAATaGGAGGGCAAACTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGGDRWE*EGKLQH
Trigger: GTGCTGCAGTTTGCCCTCCCATTCCCATCTATCCCC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGATGCCCACAAGTGCCATaGTCTCCAGAAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGCPQVP*SPETPP
Trigger: AGGAGGAGTTTCTGGAGATCATGGCACTTGTGGGCA...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGACAGCAGGCACTGGTTaGCTGAAGAGCCCTGGATTG +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCETAGTG*LKSPGL
Trigger: CAATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGT...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGATGCTGGATTTCAGGGTaGCTCTGTTCTCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGCWISG*LCSPTS
Trigger: AGAGGTTGGAGAACAGAGTCACCCTGAAATCCAGCA...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGGCGCCTGCTGCGTGCTaGCCTCTTCCCCGCGCACGA +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKAPAAC*PLPRAR
Trigger: TCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGC...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TCTCCAGGCCTCTGCTTGTTATTGCTTGAAGCCCCACAGTCTTATGCCCATGGAGAAAGACGCTCTAACTaGTCAGATAGGTGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: SPGLCLLLLEAPQSYAHGERRSN*SDRCCG
Trigger: ACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTC...TCCATGGGCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGTGGAGTGCTCCGGCCTaGCCAGATCCGGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKWSAPA*PDPGVP
Trigger: GGGGACCCCCGGATCTGGCCAGGCCGGAGCACTCCA...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGTTGCCACTTTTAGCTaGACCTTCCCAGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGVATFS*TFPGKS
Trigger: GGACTTCCCTGGGAAGGTCCAGCTAAAAGTGGCAAC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGCCAGGCCCCCAATTCTaGGGGCAAATGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQPGPQF*GQMLPL
Trigger: AAGTGGCAACATTTGCCCCCAGAATTGGGGGCCTGG...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGTGCCCAACGCTCCGTaGCAGCTTCTTATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEVPNAP*QLLIQL
Trigger: AAGCTGAATAAGAAGCTGGCACGGAGCGTTGGGCAC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGACTTGGGGGATAGATaGGAATGGGAGGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEDLGDR*EWEGKL
Trigger: CAGTTTGCCCTCCCATTCCCATCTATCCCCCAAGTC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCTTCCCCGCGCACGATaGCGTGTCCACCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKLPRAR*RVHRCP
Trigger: TGGACAGCGGTGGACACGGCATCGTGCGCGGGGAAG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCGTCCGACTCTGGAGTaGTCCGGCCTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKRPTLE*SGLARS
Trigger: GGATCTGGCCAGGCCGGAGCACTCCAGAGTCGGACG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGACAAACTGAGTCCAACTaGTCACACCACTGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGQTESN*SHHWCK
Trigger: TTTGCACCAGTGGTGTGAGCAGTTGGACTCAGTTTG...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGTGCAGGCGCCGGACATaGAGGGGCTTGGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKCRRRT*RGLVAM
Trigger: CATGGCCACCAAGCCCCTCCATGTCCGGCGCCTGCA...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGGCGTGGGGGTCTGTGTaGGCCAGAAGTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKAWGSV*ARSLRS
Trigger: GGACCTCAGACTTCTGGCTCACACAGACCCCCACGC...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGTCCCCTGGGCTGCCATaGCCATTGCTCATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKSPGLP*PLLMLP
Trigger: AGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGA...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAAACTGCTCACACCACTaGTGCAAACCTAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGNCSHH*CKPKEN
Trigger: ATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCCCCCTTGTCCAAACTaGGTCCAACTGCTCACACCA +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKPPCPN*VQLLTP
Trigger: TGGTGTGAGCAGTTGGACTCAGTTTGGACAAGGGGG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR GCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGAGGAGGACAAGTAGGTaGTCTCTCGGGCTACTTGGC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKRRTSR*SLGLLG
Trigger: GCCAAGTAGCCCGAGAGAGCACCTACTTGTCCTCCT...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCTCTCTCGGGCTACTTaGCGGGACAAAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKLSRAT*RDKEKS
Trigger: GCTCTTCTCTTTGTCCCGCCAAGTAGCCCGAGAGAG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCCCCTCCCTGCTGGATaGAGGTCTCATAGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKPLPAG*RSHSRK
Trigger: TTTCCTACTATGAGACCTTCATCCAGCAGGGAGGGG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGAAGGATCCAGGGTTGTaGCTAGATTCCGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKKDPGL*LDSGDG
Trigger: TCCATCCCCGGAATCTAGTCACAACCCTGGATCCTT...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCTGCTTGTTATTGCTTaGAGCCCCACAGTCTTATGC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKLLVIA*SPTVLC
Trigger: GCATAAGACTGTGGGGCTTCAAGCAATAACAAGCAG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR TCA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGCTACTGTACACAATCTaGAAAGAAAGACGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: MGGQTAALVKLIKETNQKLLYTI*KERRSN
Trigger: GTTAGAGCGTCTTTCTTTTCAGATTGTGTACAGTAG...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 90 bp CTGGGCTGCAGGGTCCGGCGGGCGCTGTCCCCTCCGCCCGGCGGCTaGTCGGCTGTGGGGGAAGGCGCTCTGTGCATGGACGGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: LGCRVRRALSPPPGG*SAVGEGALCMDGRR
Trigger: TCTCCGGCCGTCCATGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGCCGGGCGGAGGGGACAGCGCCCGCCGGACCCTGCAGCCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp CGGGCTGCCCTTCTCGGTGCCCGGCGCTCGGCGCCTGCTGCGTGCTaGCCTCTTCCCCGCGCACGATGCCGTGTCCACCGCTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RAALLGARRSAPAAC*PLPRARCRVHRCPG
Trigger: GCCTGGACAGCGGTGGACACGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp ACCCGGGCTGCCCTTCTCGGTGCCCGGCGCTCGGCGCCTGCTGCGTaGTGCCCTCTTCCCCGCGCACGATGCCGTGTCCACCGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TRAALLGARRSAPAA*CPLPRARCRVHRCP
Trigger: TGGACAGCGGTGGACACGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp GATCACCCGGGCTGCCCTTCTCGGTGCCCGGCGCTCGGCGCCTGCTaGGTGCTGCCCTCTTCCCCGCGCACGATGCCGTGTCCACCGCTG +
Preference number: 5 (lower is better)
Translates to: DHPGCPSRCPALGAC*VLPSSPRTMPCPPL
Trigger: CAGCGGTGGACACGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCGGGTGATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp GGAGATCACCCGGGCTGCCCTTCTCGGTGCCCGGCGCTCGGCGCCTaGTGCGTGCTGCCCTCTTCCCCGCGCACGATGCCGTGTCCACCG +
Preference number: 5 (lower is better)
Translates to: GDHPGCPSRCPALGA*CVLPSSPRTMPCPP
Trigger: CGGTGGACACGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCGGGTGATCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp TGGGGGAAGGCGCTCTGTGCATGGACGGCCGGAGATCACCCGGGCTaGCCTTCTCGGTGCCCGGCGCTCGGCGCCTGCTGCGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: WGKALCAWTAGDHPG*PSRCPALGACCVLP
Trigger: GGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCGGGTGATCTCCGGCCGTCCATGCACAGAGCGCCTTCCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp TCCCCTCCGCCCGGCGGCTGCTCGGCTGTGGGGGAAGGCGCTCTGTaGATGGACGGCCGGAGATCACCCGGGCTGCCCTTCTCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SPPPGGCSAVGEGAL*MDGRRSPGLPFSVP
Trigger: GGGCACCGAGAAGGGCAGCCCGGGTGATCTCCGGCCGTCCATGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGCCGGGCGGAGGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CCA 90 bp GGTGGCTTCGCAGGCACACAGGGGCTGAGGCGGCCCACGCGGTCGTaGGAGACGAGGCGGGCGAGCCGCAGCCCCTCGTCCATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: GGFAGTQGLRRPTRS*ETRRASRSPSSISV
Trigger: GACACTGATGGACGAGGGGCTGCGGCTCGCCCGCCTCGTCTCCCACGACCGCGTGGGCCGCCTCAGCCCCTGTGTGCCTGCGAAGCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS TCA 90 bp CTTCCTCGAACTCTGCGAGAGGTGGCTTCGCAGGCACACAGGGGCTaGGGCGGCCCACGCGGTCGTGGGAGACGAGGCGGGCGAGCCGCA +
Preference number: 5 (lower is better)
Translates to: LPRTLREVASQAHRG*GGPRGRGRRGGRAA
Trigger: TGCGGCTCGCCCGCCTCGTCTCCCACGACCGCGTGGGCCGCCTCAGCCCCTGTGTGCCTGCGAAGCCACCTCTCGCAGAGTTCGAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS GCA 90 bp ACCCTCACTGCCGGCTGGCCTCAGCCTCCACTTTCACGCTGCTCCTaGGACCCTCCACCAGCGCGGGATGGGGTCCTGGGGCAGGACATC +
Preference number: 5 (lower is better)
Translates to: TLTAGWPQPPLSRCS*DPPPARDGVLGQDI
Trigger: GATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGGCTGAGGCCAGCCGGCAGTGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 90 bp AGTCCAACCCTCACTGCCGGCTGGCCTCAGCCTCCACTTTCACGCTaGTCCTGCGACCCTCCACCAGCGCGGGATGGGGTCCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SPTLTAGWPQPPLSR*SCDPPPARDGVLGQ
Trigger: CTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGGCTGAGGCCAGCCGGCAGTGAGGGTTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACTGGAGGCAGAGTCCTaGCCCCCTCGCTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVLEAES*PPRSGQ
Trigger: CTGCCCAGAGCGAGGGGGCAAGGACTCTGCCTCCAG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTGCAGGCTGAGCTGCTaGCCCTCCCGCCGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRCRLSC*PSRRLE
Trigger: CTCTAAGCGGCGGGAGGGCAAGCAGCTCAGCCTGCA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 90 bp TGGGAGACGAGGCGGGCGAGCCGCAGCCCCTCGTCCATCAGTGTCTaGTGCAGGATGTGTCGGCTCCATAGCCCATGGGCTGGCAATGCC +
Preference number: 5 (lower is better)
Translates to: WETRRASRSPSSISV*CRMCRLHSPWAGNA
Trigger: GGCATTGCCAGCCCATGGGCTATGGAGCCGACACATCCTGCAGCAGACACTGATGGACGAGGGGCTGCGGCTCGCCCGCCTCGTCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS CCA 90 bp GCCTCCACTTTCACGCTGCTCCTGCGACCCTCCACCAGCGCGGGATaGGGTCCTGGGGCAGGACATCTGTCCAGCAGCCCTTCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: ASTFTLLLRPSTSAG*GPGAGHLSSSPSSN
Trigger: GTTCGAGGAAGGGCTGCTGGACAGATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGTGGGCAGCAGCCTCGTaGATGGTGAGCTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRWAAAS*MVSSCR
Trigger: CCTGCACGAGCTCACCATCAACGAGGCTGCTGCCCA...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTGGGGCGGCGTCAGCCTaGGACATGACCCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGGAASA*DMTPQP
Trigger: AGGCTGTGGGGTCATGTCCAAGGCTGACGCCGCCCC...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS GCA 90 bp GAGACGAGGCGGGCGAGCCGCAGCCCCTCGTCCATCAGTGTCTGCTaGAGGATGTGTCGGCTCCATAGCCCATGGGCTGGCAATGCCAGA +
Preference number: 5 (lower is better)
Translates to: ETRRASRSPSSISVC*RMCRLHSPWAGNAR
Trigger: TCTGGCATTGCCAGCCCATGGGCTATGGAGCCGACACATCCTGCAGCAGACACTGATGGACGAGGGGCTGCGGCTCGCCCGCCTCGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS CCA 90 bp TTTCACGCTGCTCCTGCGACCCTCCACCAGCGCGGGATGGGGTCCTaGGGCAGGACATCTGTCCAGCAGCCCTTCCTCGAACTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: FHAAPATLHQRGMGS*GRTSVQQPFLELCE
Trigger: CTCGCAGAGTTCGAGGAAGGGCTGCTGGACAGATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS CCA 90 bp TCGTCCATCAGTGTCTGCTGCAGGATGTGTCGGCTCCATAGCCCATaGGCTGGCAATGCCAGAGGCAGGTCAGCAGGGGGCGGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: SSISVCCRMCRLHSP*AGNARGRSAGGGVS
Trigger: GCTGACGCCGCCCCCTGCTGACCTGCCTCTGGCATTGCCAGCCCATGGGCTATGGAGCCGACACATCCTGCAGCAGACACTGATGGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS CCA 90 bp TTTCACGCTGCTCCTGCGACCCTCCACCAGCGCGGGATGGGGTCCTaGGGCAGGACATCTGTCCAGCAGCCCTTCCTCGAACTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FHAAPATLHQRGMGS*GRTSVQQPFLELLQ
Trigger: TTGCAGGAGTTCGAGGAAGGGCTGCTGGACAGATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342556.6
CDS-3UTR CAA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCTGAAGAGCCCTGGATaGGTGGCCCACTCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRLKSPG*VAHSLS
Trigger: ACTGAGAGAGTGGGCCACCAATCCAGGGCTCTTCAG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATCTGAAGAGCCCTGGATaGGTGGCCCACTCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: NPGLPRGPVKGSHTHRPYLKSPG*VAHSLS
Trigger: ACTGAGAGAGTGGGCCACCAATCCAGGGCTCTTCAG...ATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTGGGCTGCCATGCCCATaGCTCATGCTCCCTTTCCGG +
Preference number: 5 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGGLPCP*LMLPFR
Trigger: CCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCC...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTTGGGCAGCAGCCTCGTaGATGGTGAGCTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGWAAAS*MVSSCR
Trigger: CCTGCACGAGCTCACCATCAACGAGGCTGCTGCCCA...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS TCA 90 bp CACCCGCCTCACACAGCTGCTGCACGTCGTCCCCTCCCTGCTGGATaGAGGTCTCATAGTAGGAAAGGAGGTTGGCGCGCTGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: HPPHTAAARRPLPAG*RSHSRKGGWRAAGP
Trigger: GGGTCCTGCAGCGCGCCAACCTCCTTTCCTACTATGAGACCTTCATCCAGCAGGGAGGGGACGACGTGCAGCAGCTGTGTGAGGCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS TCA 90 bp GATTCCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTaGGGTCCTGGGTCTGAAGACACCAGTCCAACCCTCACTGCCGGC +
Preference number: 5 (lower is better)
Translates to: DSGDGERGGLCEPEV*GPGSEDTSPTLTAG
Trigger: GCCGGCAGTGAGGGTTGGACTGGTGTCTTCAGACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS CCA 90 bp CCGGAAGATCCTCTCCACACTTTCCACCACCATGCGTACCATCTCTaGCTCCAGTCGGTCTGGACCACCCCCAGTCCCACCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PEDPLHTFHHHAYHL*LQSVWTTPSPTCCQ
Trigger: CTGGCAGCAGGTGGGACTGGGGGTGGTCCAGACCGACTGGAGCCAGAGATGGTACGCATGGTGGTGGAAAGTGTGGAGAGGATCTTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
CDS-3UTR CAA 90 bp CAACCCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTACGTAATAAGAGCGTGTaGTCCCTCATGCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: QPRPPEGASEGIPHPPPLRNKSV*SLMQNW
Trigger: CCAGTTCTGCATGAGGGACAACACGCTCTTATTACG...TAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 90 bp CCCTTGGGAAGCTCCGGAAGATCCTCTCCACACTTTCCACCACCATaGGTACCATCTCTGGCTCCAGTCGGTCTGGACCACCCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: PLGSSGRSSPHFPPP*VPSLAPVGLDHPQS
Trigger: GGACTGGGGGTGGTCCAGACCGACTGGAGCCAGAGATGGTACGCATGGTGGTGGAAAGTGTGGAGAGGATCTTCCGGAGCTTCCCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
CDS CCA 90 bp GTCCCTCATGCAGAACTGGGCAGCAGCCTCGTTGATGGTGAGCTGTaGAGGGAGGGCAGCCAGGAGAGTCAGAATTCGAACTTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: VPHAELGSSLVDGEL*REGSQESQNSNFPA
Trigger: AGCGGGGAAGTTCGAATTCTGACTCTCCTGGCTGCCCTCCCTCCACAGCTCACCATCAACGAGGCTGCTGCCCAGTTCTGCATGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS-3UTR CAA 90 bp CCAGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTACTGTTCTCCAACCTCTaGTTTCAGCTTCTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: PGLPRGPVKGSHTHRPYVLFSNL*FQLLQW
Trigger: CCACTGAAGAAGCTGAAACAAGAGGTTGGAGAACAG...TACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AGGCCTCCCGAGGGGGCCAGTGAAGGGATCCCACACCCACCGCCCCTATGTAGGCTGTTCTCCAACCTCTaGTTTCAGCTTCTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: RPPEGASEGIPHPPPLCRLFSNL*FQLLQW
Trigger: CCACTGAAGAAGCTGAAACAAGAGGTTGGAGAACAG...CCTACATAGGGGCGGTGGGTGTGGGATCCCTTCACTGGCCCCCTCGGGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS CCA 90 bp AGCTCCACTCTCCGTAATAAGAGCGTGTTGTCCCTCATGCAGAACTaGGCAGCAGCCTCGTTGATGGTGAGCTGTGGAGGGAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSTLRNKSVLSLMQN*AAASLMVSCGGRAA
Trigger: GGCTGCCCTCCCTCCACAGCTCACCATCAACGAGGCTGCTGCCCAGTTCTGCATGAGGGACAACACGCTCTTATTACGGAGAGTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS-3UTR CAA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTCGTAATAAGAGCGTGTaGTCCCTCATGCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGRNKSV*SLMQNW
Trigger: CCAGTTCTGCATGAGGGACAACACGCTCTTATTACG...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTTTCTGGGGGCAAATGTaGCCACTTTTAGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGFWGQM*PLLAGP
Trigger: AGGTCCAGCTAAAAGTGGCAACATTTGCCCCCAGAA...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS TCA 90 bp ATCTTGAAGAGCGGGATGCTGGAGACGGGAACAGCAGGCACTGGTTaGCTGAAGAGCCCTGGATTGGTGGCCCACTCTCTCAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: ILKSGMLETGTAGTG*LKSPGLVAHSLSAF
Trigger: GAAGGCACTGAGAGAGTGGGCCACCAATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS TCA 90 bp CATTGCTCATGCTCCCTTTCCGGGTACCCGCAGTCTCAGAGATCTTaGAGAGCGGGATGCTGGAGACGGGAACAGCAGGCACTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: HCSCSLSGYPQSQRS*RAGCWRREQQALVD
Trigger: GTCAACCAGTGCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTGCGGGTACCCGGAAAGGGAGCATGAGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CCA 90 bp AGAGATCTTGAAGAGCGGGATGCTGGAGACGGGAACAGCAGGCACTaGTTGACTGAAGAGCCCTGGATTGGTGGCCCACTCTCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: RDLEERDAGDGNSRH*LTEEPWIGGPLSQC
Trigger: GCACTGAGAGAGTGGGCCACCAATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 90 bp GTTCTTCAGGGTGAAGCCTGGAGCCCTTCAAGGAGGACAAGTAGGTaGTCTCTCGGGCTACTTGGCGGGACAAAGAGAAGAGCTCCACTC +
Preference number: 5 (lower is better)
Translates to: VLQGEAWSPSRRTSR*SLGLLGGTKRRAPL
Trigger: GAGTGGAGCTCTTCTCTTTGTCCCGCCAAGTAGCCCGAGAGAGCACCTACTTGTCCTCCTTGAAGGGCTCCAGGCTTCACCCTGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554839.1
CDS-3UTR CAA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGGCTCGGGCACTGGGCTaGAGTCTGGGCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQARALG*SLGCRV
Trigger: GACCCTGCAGCCCAGACTCAAGCCCAGTGCCCGAGC...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGATGCAGGCTGAGCTGCTaGCCCTCCCGCCGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGCRLSC*PSRRLE
Trigger: CTCTAAGCGGCGGGAGGGCAAGCAGCTCAGCCTGCA...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp CCGGGGATGGAGAGCGTGGGGGTCTGTGTGAGCCAGAAGTCTGAGGTCCTGGGTTCTGCTTGTTATTGCTaGAAGCCCCACAGTCTTATG +
Preference number: 5 (lower is better)
Translates to: PGMESVGVCVSQKSEVLGSACYC*KPHSLM
Trigger: CATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGA...ACCCAGGACCTCAGACTTCTGGCTCACACAGACCCCCACGCTCTCCATCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGGCTGCCATGCCCATaGCTCATGCTCCCTTTCCGG +
Preference number: 5 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEGLPCP*LMLPFR
Trigger: CCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS CCA 90 bp AATGAGGCCCATCCATCAGACGCTTGCTTTGGTTTTGACACTACATaGGAGCTTTCTGAGGTGGGAAGACAGAGGTCAGCACCCACAGCT +
Preference number: 5 (lower is better)
Translates to: NEAHPSDACFGFDTT*ELSEVGRQRSAPTA
Trigger: AGCTGTGGGTGCTGACCTCTGTCTTCCCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS-3UTR CAA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAGCAGTCTCAGAGATCTaGAAGAGCGGGATGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGAVSEI*KSGMLE
Trigger: CTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTGC...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGCTCTCTCGGGCTACTaGGCGGGACAAAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEALSGY*AGQREE
Trigger: CTCTTCTCTTTGTCCCGCCAAGTAGCCCGAGAGAGC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGAAACAGCAGGCACTGGTaGACTGAAGAGCCCTGGATT +
Preference number: 5 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGNSRHW*TEEPWI
Trigger: AATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTT...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGGTCCCCCTTTCCCCCTaGTCCAAACTGAGTCCAACT +
Preference number: 5 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQVPLSP*SKLSPT
Trigger: AGTTGGACTCAGTTTGGACAAGGGGGAAAGGGGGAC...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGTCCCCCTTTCCCCCTaGTCCAAACTGAGTCCAACT +
Preference number: 5 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEVPLSP*SKLSPT
Trigger: AGTTGGACTCAGTTTGGACAAGGGGGAAAGGGGGAC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 90 bp ACACCCCTTCACCATTGGACAAATGAGGCCCATCCATCAGACGCTTaGTTTGGTTTTGACACTACATGGGAGCTTTCTGAGGTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: TPLHHWTNEAHPSDA*FGFDTTWELSEVGR
Trigger: TCTTCCCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATTTGTCCAATGGTGAAGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS-3UTR CAA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGGCTCGGGCACTGGGCTaGAGTCTGGGCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: MGGQTAALVKLIKETNQKARALG*SLGCRV
Trigger: GACCCTGCAGCCCAGACTCAAGCCCAGTGCCCGAGC...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp AACTGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGCCTCTGCTTGTTATaGCTTGAAGCCCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: NCSHHWCKPKENGSVLCEGLCLL*LEAPQS
Trigger: AGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCC...CTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp TGCTCACACCACTGGTGCAAACCTAAAGAGAATGGGAGTGTGTTGTGTGAGGGATTCTGGGGGCAAATGTaGCCACTTTTAGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: CSHHWCKPKENGSVLCEGFWGQM*PLLAGP
Trigger: AGGTCCAGCTAAAAGTGGCAACATTTGCCCCCAGAA...TCCCTCACACAACACACTCCCATTCTCTTTAGGTTTGCACCAGTGGTGTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp ACACAATCTGAAAAGAAAGACGCTCTAACTGCTCAGATAGGTGCTGCGGTCCAGTCTGCTTGTTATTGCTaGAAGCCCCACAGTCTTATG +
Preference number: 5 (lower is better)
Translates to: TQSEKKDALTAQIGAAVQSACYC*KPHSLM
Trigger: CATAAGACTGTGGGGCTTCAAGCAATAACAAGCAGA...CTGGACCGCAGCACCTATCTGAGCAGTTAGAGCGTCTTTCTTTTCAGATTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGGCAGTCTCAGAGATCTaGAAGAGCGGGATGCTGGAG +
Preference number: 5 (lower is better)
Translates to: MGGQTAALVKLIKETNQKAVSEI*KSGMLE
Trigger: CTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTGC...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS-3UTR CAA 90 bp ATGGGAGGGCAAACTGCAGCACTTGTTAAATTAATTAAAGAAACAAACCAGAAGGGCCTCTGCTTGTTATaGCTTGAAGCCCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: MGGQTAALVKLIKETNQKGLCLL*LEAPQS
Trigger: AGACTGTGGGGCTTCAAGCAATAACAAGCAGAGGCC...CTTCTGGTTTGTTTCTTTAATTAATTTAACAAGTGCTGCAGTTTGCCCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 72 bp CCGGGCTGCCCTTCTCGGTGCCCGGCGCTCGGCGCCTaGTGCGTGCTGCCCTCTTCCCCGCGCACGATGCCG +
Preference number: 6 (lower is better)
Translates to: PGCPSRCPALGA*CVLPSSPRTMP
Trigger: CGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CCA 72 bp GCAGGCACACAGGGGCTGAGGCGGCCCACGCGGTCGTaGGAGACGAGGCGGGCGAGCCGCAGCCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: AGTQGLRRPTRS*ETRRASRSPSS
Trigger: GGACGAGGGGCTGCGGCTCGCCCGCCTCGTCTCCCACGACCGCGTGGGCCGCCTCAGCCCCTGTGTGCCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS GCA 72 bp AGGGTCCGGCGGGCGCTGTCCCCTCCGCCCGGCGGCTaGTCGGCTGTGGGGGAAGGCGCTCTGTGCATGGAC +
Preference number: 6 (lower is better)
Translates to: RVRRALSPPPGG*SAVGEGALCMD
Trigger: GTCCATGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGCCGGGCGGAGGGGACAGCGCCCGCCGGACCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp CTTCTCGGTGCCCGGCGCTCGGCGCCTGCTGCGTGCTaGCCTCTTCCCCGCGCACGATGCCGTGTCCACCGC +
Preference number: 6 (lower is better)
Translates to: LLGARRSAPAAC*PLPRARCRVHR
Trigger: GCGGTGGACACGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp GCCCTTCTCGGTGCCCGGCGCTCGGCGCCTGCTGCGTaGTGCCCTCTTCCCCGCGCACGATGCCGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: ALLGARRSAPAA*CPLPRARCRVH
Trigger: GTGGACACGGCATCGTGCGCGGGGAAGAGGGCAGCACGCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp GCGCTCTGTGCATGGACGGCCGGAGATCACCCGGGCTaGCCTTCTCGGTGCCCGGCGCTCGGCGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ALCAWTAGDHPG*PSRCPALGACC
Trigger: GCAGCAGGCGCCGAGCGCCGGGCACCGAGAAGGGCAGCCCGGGTGATCTCCGGCCGTCCATGCACAGAGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp CCCGGCGGCTGCTCGGCTGTGGGGGAAGGCGCTCTGTaGATGGACGGCCGGAGATCACCCGGGCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PGGCSAVGEGAL*MDGRRSPGLPF
Trigger: GAAGGGCAGCCCGGGTGATCTCCGGCCGTCCATGCACAGAGCGCCTTCCCCCACAGCCGAGCAGCCGCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS TCA 72 bp ACTCTGCGAGAGGTGGCTTCGCAGGCACACAGGGGCTaGGGCGGCCCACGCGGTCGTGGGAGACGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: TLREVASQAHRG*GGPRGRGRRGG
Trigger: CCCGCCTCGTCTCCCACGACCGCGTGGGCCGCCTCAGCCCCTGTGTGCCTGCGAAGCCACCTCTCGCAGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS GCA 72 bp GCCGGCTGGCCTCAGCCTCCACTTTCACGCTGCTCCTaGGACCCTCCACCAGCGCGGGATGGGGTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AGWPQPPLSRCS*DPPPARDGVLG
Trigger: CCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGCAGCGTGAAAGTGGAGGCTGAGGCCAGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS CCA 72 bp AGCCTCCTCTTCTCCTCCTGCCCCAACGTCCGACTCTaGAGTGCTCCGGCCTGGCCAGATCCGGGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: SLLFSSCPNVRL*SAPAWPDPGVP
Trigger: GGGGACCCCCGGATCTGGCCAGGCCGGAGCACTCCAGAGTCGGACGTTGGGGCAGGAGGAGAAGAGGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
CDS GCA 72 bp GAAAGGAGGTTGGCGCGCTGCAGGACCCGGTACAGCTaGAGCTCCCCCAGCGTCCGAGGCAGTGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: ERRLARCRTRYS*SSPSVRGSAMA
Trigger: AGCCATGGCACTGCCTCGGACGCTGGGGGAGCTGCAGCTGTACCGGGTCCTGCAGCGCGCCAACCTCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 72 bp CGGGCGAGCCGCAGCCCCTCGTCCATCAGTGTCTGCTaGAGGATGTGTCGGCTCCATAGCCCATGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: RASRSPSSISVC*RMCRLHSPWAG
Trigger: GCCAGCCCATGGGCTATGGAGCCGACACATCCTGCAGCAGACACTGATGGACGAGGGGCTGCGGCTCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS CCA 72 bp GCTCCTGCGACCCTCCACCAGCGCGGGATGGGGTCCTaGGGCAGGACATCTGTCCAGCAGCCCTTCCTCGAA +
Preference number: 6 (lower is better)
Translates to: APATLHQRGMGS*GRTSVQQPFLE
Trigger: TTCGAGGAAGGGCTGCTGGACAGATGTCCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 72 bp AGGCGGGCGAGCCGCAGCCCCTCGTCCATCAGTGTCTaGTGCAGGATGTGTCGGCTCCATAGCCCATGGGCT +
Preference number: 6 (lower is better)
Translates to: RRASRSPSSISV*CRMCRLHSPWA
Trigger: AGCCCATGGGCTATGGAGCCGACACATCCTGCAGCAGACACTGATGGACGAGGGGCTGCGGCTCGCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS GCA 72 bp CTGCGGGCACTGCCTGCCTTTTCCCCTGGGCTGCCATaGCCATTGCTCATGCTCCCTTTCCGGGTACCCGCA +
Preference number: 6 (lower is better)
Translates to: LRALPAFSPGLP*PLLMLPFRVPA
Trigger: TGCGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGCAGTGCCCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
CDS CCA 72 bp AGTGTCTGCTGCAGGATGTGTCGGCTCCATAGCCCATaGGCTGGCAATGCCAGAGGCAGGTCAGCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: SVCCRMCRLHSP*AGNARGRSAGG
Trigger: GCCCCCTGCTGACCTGCCTCTGGCATTGCCAGCCCATGGGCTATGGAGCCGACACATCCTGCAGCAGACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300131.8
CDS CCA 72 bp GGGTCTGAAGACACCAGTCCAACCCTCACTGCCGGCTaGCCTCAGCCTCCACTTTCACGCTGCTCCTGCGAC +
Preference number: 6 (lower is better)
Translates to: GSEDTSPTLTAG*PQPPLSRCSCD
Trigger: GTCGCAGGAGCAGCGTGAAAGTGGAGGCTGAGGCCAGCCGGCAGTGAGGGTTGGACTGGTGTCTTCAGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS GCA 72 bp CACTGCCTGCCTTTTCCCCTGGGCTGCCATGCCCATTaGTCATGCTCCCTTTCCGGGTACCCGCAGTCTCAG +
Preference number: 6 (lower is better)
Translates to: HCLPFPLGCHAH*SCSLSGYPQSQ
Trigger: CTGAGACTGCGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CCA 72 bp CCTCTCCACACTTTCCACCACCATGCGTACCATCTCTaGCTCCAGTCGGTCTGGACCACCCCCAGTCCCACC +
Preference number: 6 (lower is better)
Translates to: PLHTFHHHAYHL*LQSVWTTPSPT
Trigger: GGTGGGACTGGGGGTGGTCCAGACCGACTGGAGCCAGAGATGGTACGCATGGTGGTGGAAAGTGTGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
CDS CAA 72 bp GCACTGCCTGCCTTTTCCCCTGGGCTGCCATGCCCATaGCTCATGCTCCCTTTCCGGGTACCCGCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: ALPAFSPGLPCP*LMLPFRVPAVS
Trigger: TGAGACTGCGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CCA 72 bp GAAGAGCGGGATGCTGGAGACGGGAACAGCAGGCACTaGTTGACTGAAGAGCCCTGGATTGGTGGCCCACTC +
Preference number: 6 (lower is better)
Translates to: EERDAGDGNSRH*LTEEPWIGGPL
Trigger: GAGTGGGCCACCAATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CAA 90 bp AAACTGCGGGCACTGCCTGCCTTTTCCCCTGGGCTGCCATGCCCATaGCTCATGCTCCCTTTCCGGGTACCCGCAGTCTCAGAGATCTTG +
Preference number: 6 (lower is better)
Translates to: KLRALPAFSPGLPCP*LMLPFRVPAVSEIL
Trigger: CAAGATCTCTGAGACTGCGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAGGCAGTGCCCGCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
CDS TCA 72 bp CACACAGCTGCTGCACGTCGTCCCCTCCCTGCTGGATaGAGGTCTCATAGTAGGAAAGGAGGTTGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: HTAAARRPLPAG*RSHSRKGGWRA
Trigger: AGCGCGCCAACCTCCTTTCCTACTATGAGACCTTCATCCAGCAGGGAGGGGACGACGTGCAGCAGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300131.8
ENST00000342556.6
CDS TCA 72 bp TGCTCCCTTTCCGGGTACCCGCAGTCTCAGAGATCTTaGAGAGCGGGATGCTGGAGACGGGAACAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: CSLSGYPQSQRS*RAGCWRREQQA
Trigger: TGCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTGCGGGTACCCGGAAAGGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp CTGCCTTTTCCCCTGGGCTGCCATGCCCATTGCTCATaGTCCCTTTCCGGGTACCCGCAGTCTCAGAGATCT +
Preference number: 6 (lower is better)
Translates to: LPFPLGCHAHCS*SLSGYPQSQRS
Trigger: AGATCTCTGAGACTGCGGGTACCCGGAAAGGGAGCATGAGCAATGGGCATGGCAGCCCAGGGGAAAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp GGGCAGCCAGGAGAGTCAGAATTCGAACTTCCCCGCTaGCTCACCAGACCTCCTCACACCCCTTCACCATTG +
Preference number: 6 (lower is better)
Translates to: GQPGESEFELPR*LTRPPHTPSPL
Trigger: CAATGGTGAAGGGGTGTGAGGAGGTCTGGTGAGGCAGCGGGGAAGTTCGAATTCTGACTCTCCTGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS CAA 72 bp ATGCTCCCTTTCCGGGTACCCGCAGTCTCAGAGATCTaGAAGAGCGGGATGCTGGAGACGGGAACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: MLPFRVPAVSEI*KSGMLETGTAG
Trigger: GCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGATCTCTGAGACTGCGGGTACCCGGAAAGGGAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS CAA 90 bp GATCTTGAAGAGCGGGATGCTGGAGACGGGAACAGCAGGCACTGGTaGACTGAAGAGCCCTGGATTGGTGGCCCACTCTCTCAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: DLEERDAGDGNSRHW*TEEPWIGGPLSQCL
Trigger: AAGGCACTGAGAGAGTGGGCCACCAATCCAGGGCTCTTCAGTCAACCAGTGCCTGCTGTTCCCGTCTCCAGCATCCCGCTCTTCAAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554718.1
ENST00000555857.1
CDS GCA 72 bp GGTGAAGCCTGGAGCCCTTCAAGGAGGACAAGTAGGTaGTCTCTCGGGCTACTTGGCGGGACAAAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GEAWSPSRRTSR*SLGLLGGTKRR
Trigger: TCTTCTCTTTGTCCCGCCAAGTAGCCCGAGAGAGCACCTACTTGTCCTCCTTGAAGGGCTCCAGGCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554839.1
CDS CAA 90 bp TGGCGGGACAAAGAGAAGAGCTCCACTCTCCGTAATAAGAGCGTGTaGTCCCTCATGCAGAACTGGGCAGCAGCCTCGTTGATGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WRDKEKSSTLRNKSV*SLMQNWAAASLMVS
Trigger: GCTCACCATCAACGAGGCTGCTGCCCAGTTCTGCATGAGGGACAACACGCTCTTATTACGGAGAGTGGAGCTCTTCTCTTTGTCCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554839.1
CDS CCA 72 bp GCTGCCTCACCAGACCTCCTCACACCCCTTCACCATTaGACAAATGAGGCCCATCCATCAGACGCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: AASPDLLTPLHH*TNEAHPSDACF
Trigger: AAAGCAAGCGTCTGATGGATGGGCCTCATTTGTCCAATGGTGAAGGGGTGTGAGGAGGTCTGGTGAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS CAA 72 bp AAAGAGAAGAGCTCCACTCTCCGTAATAAGAGCGTGTaGTCCCTCATGCAGAACTGGGCAGCAGCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: KEKSSTLRNKSV*SLMQNWAAASL
Trigger: CAACGAGGCTGCTGCCCAGTTCTGCATGAGGGACAACACGCTCTTATTACGGAGAGTGGAGCTCTTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300131.8
ENST00000342556.6
ENST00000554839.1
CDS CAA 90 bp ACCATTGGACAAATGAGGCCCATCCATCAGACGCTTGCTTTGGTTTaGACACTACATGGGAGCTTTCTGAGGTGGGAAGACAGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: TIGQMRPIHQTLALV*TLHGSFLRWEDRGQ
Trigger: CTGACCTCTGTCTTCCCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATTTGTCCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS CAA 90 bp CCCTTCACCATTGGACAAATGAGGCCCATCCATCAGACGCTTGCTTaGGTTTTGACACTACATGGGAGCTTTCTGAGGTGGGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: PFTIGQMRPIHQTLA*VLTLHGSFLRWEDR
Trigger: TCTGTCTTCCCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATTTGTCCAATGGTGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS CCA 72 bp CATCCATCAGACGCTTGCTTTGGTTTTGACACTACATaGGAGCTTTCTGAGGTGGGAAGACAGAGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: HPSDACFGFDTT*ELSEVGRQRSA
Trigger: TGCTGACCTCTGTCTTCCCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS CAA 72 bp CAAATGAGGCCCATCCATCAGACGCTTGCTTTGGTTTaGACACTACATGGGAGCTTTCTGAGGTGGGAAGAC +
Preference number: 6 (lower is better)
Translates to: QMRPIHQTLALV*TLHGSFLRWED
Trigger: GTCTTCCCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS GCA 72 bp CACCATTGGACAAATGAGGCCCATCCATCAGACGCTTaGTTTGGTTTTGACACTACATGGGAGCTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: HHWTNEAHPSDA*FGFDTTWELSE
Trigger: CTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATTTGTCCAATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1
CDS CAA 72 bp ATTGGACAAATGAGGCCCATCCATCAGACGCTTGCTTaGGTTTTGACACTACATGGGAGCTTTCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: IGQMRPIHQTLA*VLTLHGSFLRW
Trigger: CCACCTCAGAAAGCTCCCATGTAGTGTCAAAACCAAAGCAAGCGTCTGATGGATGGGCCTCATTTGTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554839.1