Pregenerated sensors for NAA20 (Homo sapiens)
Ensembl gene IDs: ENSG00000173418Ensembl transcript IDs: ENST00000310450.8, ENST00000334982.9, ENST00000398602.2, ENST00000463154.5, ENST00000480550.1, ENST00000481837.1, ENST00000484480.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCTGCCTAAGAACCACTaGCCAGGGTTATTCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: EEETGASLFPSIHTVNTMLPKNH*PGLFNV Trigger: GACATTGAATAACCCTGGGCAGTGGTTCTTAGGCAG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310450.8 |
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| CDS-3UTR GCA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATGTCGGCGGTGCCCTCTaGCCAGAAGAGGCGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RTEEETGASLFPSIHTVNVGGAL*PEEARP Trigger: GGGCCGCGCCTCTTCTGGGCAGAGGGCACCGCCGAC...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATCTCGCAAGCCCCCTCTaGGGCCTGGCCGTCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RTEEETGASLFPSIHTVNLASPL*GLAVGG Trigger: ACCGCCGACGGCCAGGCCGCAGAGGGGGCTTGCGAG...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCACCCCAGCGCCTCCTaGCAGCGACCACGAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMHPSAS*QRPRAE Trigger: CTCCGCTCGTGGTCGCTGTCAGGAGGCGCTGGGGTG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATTCGCCAAGGCCGGCGTaGGTCGACTCCAGGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: RTEEETGASLFPSIHTVNSPRPA*VDSRPT Trigger: GGTGGGCCTGGAGTCGACGCACGCCGGCCTTGGCGA...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCGGAGGCCCGAGCGCTaGCCCAGAACCTGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMRRPER*PRTCQL Trigger: GAGCTGGCAGGTTCTGGGGCAGCGCTCGGGCCTCCG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACCCTGGCCGTCGGCGGTaGCCTCTGCCCAGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNPGRRR*PLPRRG Trigger: GCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGG...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCGCTGCCCCAGAACCTaGCAGCTCGCAGGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMRCPRT*QLAGSR Trigger: TCTGGACCCTGCGAGCTGGCAGGTTCTGGGGCAGCG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACCATGAGAAGCCCAGGTCGTaGGCTCCAGGCCGCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETGASLFPSIHTVNTMNHEKPRS*APGRVS Trigger: GGAGACGCGGCCTGGAGCCCACGACCTGGGCTTCTC...ATGGTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCATCCCAACAGCTGCTaGCCAGCTTCCGATCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMHPNSC*PASDPR Trigger: GCGAGGATCGGAAGCTGGTCAGCAGCTGTTGGGATG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTTCACTCACATGTTGTTaGAGCGGAACAGGTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTSLTCC*SGTGRR Trigger: GCGACGACCTGTTCCGCTTCAACAACATGTGAGTGA...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACTCCAGAGACAAAGTTTaGGCACCTCGGCCAAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNSRDKV*APRPRS Trigger: CGACCTTGGCCGAGGTGCTCAAACTTTGTCTCTGGA...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATCATCAGGCTCCCCGTTaGTGGCCGAATAGTACTCTA | + |
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Preference number: 4 (lower is better) Translates to: RTEEETGASLFPSIHTVNHQAPR*WPNSTL Trigger: TAGAGTACTATTCGGCCAGCAACGGGGAGCCTGATG...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACACCACGGCCACCAGGTaGGCTTCACGATGTACACAT | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNTTATR*ASRCTH Trigger: ATGTGTACATCGTGAAGCCCACCTGGTGGCCGTGGT...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCTGCAGGGGACGCAGTaGTCAGTGTCATTTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMLQGTQ*SVSFHL Trigger: CAAATGAAATGACACTGATCACTGCGTCCCCTGCAG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACCATCAGGCTCCCCGTTaGTGGCCGAATAGTACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNHQAPR*WPNSTL Trigger: TAGAGTACTATTCGGCCAGCAACGGGGAGCCTGATG...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTAAGGCGTCGAAATTCTaGGGCAACAGACAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTKASKF*GNRQSC Trigger: ACAGCTCTGTCTGTTGCCCCAGAATTTCGACGCCTT...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATCTGCCTAAGAACCACTaGCCAGGGTTATTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTEEETGASLFPSIHTVNLPKNH*PGLFNV Trigger: GACATTGAATAACCCTGGGCAGTGGTTCTTAGGCAG...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACAAGGCGTCGAAATTCTaGGGCAACAGACAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNKASKF*GNRQSC Trigger: ACAGCTCTGTCTGTTGCCCCAGAATTTCGACGCCTT...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTAACAATGAAATACTCTaGCCAGTGGGCGAGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTNNEIL*PVGEVL Trigger: CAATACCTCGCCCACTGGCCAGAGTATTTCATTGTT...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACCATAAGGCGTCGAAATTCTaGGGCAACAGACAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETGASLFPSIHTVNTMNHKASKF*GNRQSC Trigger: ACAGCTCTGTCTGTTGCCCCAGAATTTCGACGCCTT...ATGGTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGCCGAATAGTACTCTATaGCCGTCCTATATACACTGT | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMPNSTL*PSYIHC Trigger: ACAGTGTATATAGGACGGTCATAGAGTACTATTCGG...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTCCGAATAGTACTCTATaGCCGTCCTATATACACTGT | + |
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Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTPNSTL*PSYIHC Trigger: ACAGTGTATATAGGACGGTCATAGAGTACTATTCGG...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACAACAATGAAATACTCTaGCCAGTGGGCGAGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNNNEIL*PVGEVL Trigger: CAATACCTCGCCCACTGGCCAGAGTATTTCATTGTT...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAAATATATGCAGCAGTaGTTCTCAGGCACAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMKYMQQ*FSGTEL Trigger: CAGTTCTGTGCCTGAGAACCACTGCTGCATATATTT...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATGAATACTATGAACCATaGGAGTGGTATGTTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RTEEETGASLFPSIHTVNEYYEP*EWYVSF Trigger: GAAGGAAACATACCACTCTCATGGTTCATAGTATTC...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTGAATACTATGAACCATaGGAGTGGTATGTTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTEYYEP*EWYVSF Trigger: GAAGGAAACATACCACTCTCATGGTTCATAGTATTC...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTAGTATCCCTGGAAAGTaGTTTCCTCATATCATAAGC | + |
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Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTSIPGK*FPHIIS Trigger: GCTTATGATATGAGGAAAGCACTTTCCAGGGATACT...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTTCTTCTCAGTATCCCTaGAAAGTGCTTTCCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: TEEETGASLFPSIHTVNTSSQYP*KVLSSY Trigger: ATATGAGGAAAGCACTTTCCAGGGATACTGAGAAGA...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGTCTTCTCAGTATCCCTaGAAAGTGCTTTCCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMSSQYP*KVLSSY Trigger: ATATGAGGAAAGCACTTTCCAGGGATACTGAGAAGA...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACAAATATATGCAGCAGTaGTTCTCAGGCACAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNKYMQQ*FSGTEL Trigger: CAGTTCTGTGCCTGAGAACCACTGCTGCATATATTT...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGGATGAGGTAATGGTATaGTGGATTTCTTCTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: EEETGASLFPSIHTVNTMDEVMV*WISSQY Trigger: ATACTGAGAAGAAATCCATCATACCATTACCTCATC...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACGATGAGGTAATGGTATaGTGGATTTCTTCTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: EETGASLFPSIHTVNTMNDEVMV*WISSQY Trigger: ATACTGAGAAGAAATCCATCATACCATTACCTCATC...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR CCA 90 bp | GAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACCATTCTTCTCAGTATCCCTaGAAAGTGCTTTCCTCATAT | + |
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Preference number: 4 (lower is better) Translates to: ETGASLFPSIHTVNTMNHSSQYP*KVLSSY Trigger: ATATGAGGAAAGCACTTTCCAGGGATACTGAGAAGA...ATGGTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS-3UTR TCA 90 bp | GAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACCATGATGAGGTAATGGTATaGTGGATTTCTTCTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: ETGASLFPSIHTVNTMNHDEVMV*WISSQY Trigger: ATACTGAGAAGAAATCCATCATACCATTACCTCATC...ATGGTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310450.8 ENST00000334982.9 ENST00000398602.2 |
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| CDS CCA 90 bp | AGGTCGCCAAGGCCGGCGTGCGTCGACTCCAGGCCCACCTCTCCCTaGACCCTGTGGCCCCAGGGAGGCGCCCACGTTGGCCGGCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RSPRPACVDSRPTSP*TLWPQGGAHVGRRG Trigger: CCCCCGCCGGCCAACGTGGGCGCCTCCCTGGGGCCACAGGGTCCAGGGAGAGGTGGGCCTGGAGTCGACGCACGCCGGCCTTGGCGACCT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS CCA 90 bp | CAGCTGCTGACCAGCTTCCGATCCTCGCAAGCCCCCTCTGCGGCCTaGCCGTCGGCGGTGCCCTCTGCCCAGAAGAGGCGCGGCCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: QLLTSFRSSQAPSAA*PSAVPSAQKRRGPA Trigger: GGCCGGGCCGCGCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGGCCGCAGAGGGGGCTTGCGAGGATCGGAAGCTGGTCAGCAGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS GCA 90 bp | GCTTCCGATCCTCGCAAGCCCCCTCTGCGGCCTGGCCGTCGGCGGTaGCCTCTGCCCAGAAGAGGCGCGGCCCGGCCACGAACCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: ASDPRKPPLRPGRRR*PLPRRGAARPRTSK Trigger: CTTGCTGGTTCGTGGCCGGGCCGCGCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGGCCGCAGAGGGGGCTTGCGAGGATCGGAAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS GCA 90 bp | ATCCTCGCAAGCCCCCTCTGCGGCCTGGCCGTCGGCGGTGCCCTCTaGCCAGAAGAGGCGCGGCCCGGCCACGAACCAGCAAGCAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: ILASPLCGLAVGGAL*PEEARPGHEPASSR Trigger: CCTACTGCTTGCTGGTTCGTGGCCGGGCCGCGCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGGCCGCAGAGGGGGCTTGCGAGGAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS CCA 90 bp | GCCACGAACCAGCAAGCAGTAGGGCAGGGCGAGAAGCCCAGGTCGTaGGCTCCAGGCCGCGTCTCCAGCTCGCCCCATCACCCCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: ATNQQAVGQGEKPRS*APGRVSSSPHHPSA Trigger: GGCGCTGGGGTGATGGGGCGAGCTGGAGACGCGGCCTGGAGCCCACGACCTGGGCTTCTCGCCCTGCCCTACTGCTTGCTGGTTCGTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS GCA 90 bp | ATCCCAACAGCTGCTGACCAGCTTCCGATCCTCGCAAGCCCCCTCTaGGGCCTGGCCGTCGGCGGTGCCCTCTGCCCAGAAGAGGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: IPTAADQLPILASPL*GLAVGGALCPEEAR Trigger: CCGCGCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGGCCGCAGAGGGGGCTTGCGAGGATCGGAAGCTGGTCAGCAGCTGTTGGGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS TCA 90 bp | CGCTGCCCCAGAACCTGCCAGCTCGCAGGGTCCAGAGACAAAGTTTaGGCACCTCGGCCAAGGTCGCCAAGGCCGGCGTGCGTCGACTCC | + |
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Preference number: 5 (lower is better) Translates to: RCPRTCQLAGSRDKV*APRPRSPRPACVDS Trigger: GGAGTCGACGCACGCCGGCCTTGGCGACCTTGGCCGAGGTGCTCAAACTTTGTCTCTGGACCCTGCGAGCTGGCAGGTTCTGGGGCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS TCA 90 bp | ACGGCCACCAGGTGGGCTTCACGATGTACACATCCCAACAGCTGCTaGCCAGCTTCCGATCCTCGCAAGCCCCCTCTGCGGCCTGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: TATRWASRCTHPNSC*PASDPRKPPLRPGR Trigger: ACGGCCAGGCCGCAGAGGGGGCTTGCGAGGATCGGAAGCTGGTCAGCAGCTGTTGGGATGTGTACATCGTGAAGCCCACCTGGTGGCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS CCA 90 bp | AGGTCTGGCCTTAACTCGAATCCAAAGAAACTGCATCCAGGGCTCTaGGCACAGCGAGCCTCCCCTAAGATCTGCCGTGACTCCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: RSGLNSNPKKLHPGL*AQRASPKICRDSSQ Trigger: CTGTGAGGAGTCACGGCAGATCTTAGGGGAGGCTCGCTGTGCCCAGAGCCCTGGATGCAGTTTCTTTGGATTCGAGTTAAGGCCAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481837.1 |
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| CDS GCA 90 bp | TTACTGCAAATCAGAGGTCTGGCCTTAACTCGAATCCAAAGAAACTaGATCCAGGGCTCTGGGCACAGCGAGCCTCCCCTAAGATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLQIRGLALTRIQRN*IQGSGHSEPPLRSA Trigger: GGCAGATCTTAGGGGAGGCTCGCTGTGCCCAGAGCCCTGGATGCAGTTTCTTTGGATTCGAGTTAAGGCCAGACCTCTGATTTGCAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481837.1 |
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| CDS CCA 90 bp | GACAGCATCTGCTGCAGGGGACGCAGTGATCAGTGTCATTTCATTTaGATACAATTTAACCACGGCCACCAGGTGGGCTTCACGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: DSICCRGRSDQCHFI*IQFNHGHQVGFTMY Trigger: GTACATCGTGAAGCCCACCTGGTGGCCGTGGTTAAATTGTATCCAAATGAAATGACACTGATCACTGCGTCCCCTGCAGCAGATGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS TCA 90 bp | GGGTGCGCAGCTACAGTAACTAAACTTGCAAACACTAACCATGACTaGGACAGCATCTGCTGCAGGGGACGCAGTGATCAGTGTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: GCAATVTKLANTNHD*DSICCRGRSDQCHF Trigger: GAAATGACACTGATCACTGCGTCCCCTGCAGCAGATGCTGTCTCAGTCATGGTTAGTGTTTGCAAGTTTAGTTACTGTAGCTGCGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481837.1 |
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| CDS-3UTR CAA 90 bp | GAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGGTCCAGAGACAAAGTTaGAGCACCTCGGCCAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: EEETGASLFPSIHTVNTMVQRQS*STSAKV Trigger: GACCTTGGCCGAGGTGCTCAAACTTTGTCTCTGGAC...CATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTGTCACTCACATGTTGTaGAAGCGGAACAGGTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: TEEETGASLFPSIHTVNTVTHML*KRNRSS Trigger: CGACGACCTGTTCCGCTTCAACAACATGTGAGTGAC...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR CAA 90 bp | AGAACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATCGTGTCACTCACATGTaGTTGAAGCGGAACAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: RTEEETGASLFPSIHTVNRVTHM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATGTGAGTGACACG...ATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS-3UTR CAA 90 bp | ACTGAGGAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTGGATCCAAGTTAATGTaGTTGAAGCGGAACAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: TEEETGASLFPSIHTVNTGSKLM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTAACTTGGATCC...AGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTCCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310450.8 ENST00000334982.9 |
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| CDS-3UTR CAA 90 bp | GAGGAGACTGGAGCAAGTCTTTTCCCTAGCATACATACAGTGAATACTATGAACGGATCCAAGTTAATGTaGTTGAAGCGGAACAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: EETGASLFPSIHTVNTMNGSKLM*LKRNRS Trigger: CGACCTGTTCCGCTTCAACAACATTAACTTGGATCC...GTTCATAGTATTCACTGTATGTATGCTAGGGAAAAGACTTGCTCCAGTCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310450.8 ENST00000334982.9 |
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| CDS GCA 72 bp | CCTCGCAAGCCCCCTCTGCGGCCTGGCCGTCGGCGGTaGCCTCTGCCCAGAAGAGGCGCGGCCCGGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: PRKPPLRPGRRR*PLPRRGAARPR Trigger: TCGTGGCCGGGCCGCGCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGGCCGCAGAGGGGGCTTGCGAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS GCA 72 bp | AGCCCCCTCTGCGGCCTGGCCGTCGGCGGTGCCCTCTaGCCAGAAGAGGCGCGGCCCGGCCACGAACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPLCGLAVGGAL*PEEARPGHEPA Trigger: TGCTGGTTCGTGGCCGGGCCGCGCCTCTTCTGGGCAGAGGGCACCGCCGACGGCCAGGCCGCAGAGGGGGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS TCA 72 bp | CGCGTCTCCAGCTCGCCCCATCACCCCAGCGCCTCCTaGCAGCGACCACGAGCGGAGGCCCGAGCGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RVSSSPHHPSAS*QRPRAEARALP Trigger: GGGCAGCGCTCGGGCCTCCGCTCGTGGTCGCTGTCAGGAGGCGCTGGGGTGATGGGGCGAGCTGGAGACGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS GCA 72 bp | TTCCGAAGACCGTTCGCCAAGACCCCGCGCCCGCCCTaGCGGAAGTCTCCCGGAGCGTGGCCGCCGCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FRRPFAKTPRPP*RKSPGAWPPRN Trigger: GTTCCGCGGCGGCCACGCTCCGGGAGACTTCCGGCAGGGCGGGCGCGGGGTCTTGGCGAACGGTCTTCGGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310450.8 ENST00000484480.5 |
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| CDS GCA 72 bp | CCTCCTGACAGCGACCACGAGCGGAGGCCCGAGCGCTaGCCCAGAACCTGCCAGCTCGCAGGGTCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PPDSDHERRPER*PRTCQLAGSRD Trigger: GTCTCTGGACCCTGCGAGCTGGCAGGTTCTGGGGCAGCGCTCGGGCCTCCGCTCGTGGTCGCTGTCAGGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS CAA 90 bp | GCGCTGCCCCAGAACCTGCCAGCTCGCAGGGTCCAGAGACAAAGTTaGAGCACCTCGGCCAAGGTCGCCAAGGCCGGCGTGCGTCGACTC | + |
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Preference number: 6 (lower is better) Translates to: ALPQNLPARRVQRQS*STSAKVAKAGVRRL Trigger: GAGTCGACGCACGCCGGCCTTGGCGACCTTGGCCGAGGTGCTCAAACTTTGTCTCTGGACCCTGCGAGCTGGCAGGTTCTGGGGCAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS CAA 72 bp | CAGAACCTGCCAGCTCGCAGGGTCCAGAGACAAAGTTaGAGCACCTCGGCCAAGGTCGCCAAGGCCGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: QNLPARRVQRQS*STSAKVAKAGV Trigger: CACGCCGGCCTTGGCGACCTTGGCCGAGGTGCTCAAACTTTGTCTCTGGACCCTGCGAGCTGGCAGGTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398602.2 |
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| CDS TCA 72 bp | AGGTGGGCTTCACGATGTACACATCCCAACAGCTGCTaGCCAGCTTCCGATCCTCGCAAGCCCCCTCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RWASRCTHPNSC*PASDPRKPPLR Trigger: CCGCAGAGGGGGCTTGCGAGGATCGGAAGCTGGTCAGCAGCTGTTGGGATGTGTACATCGTGAAGCCCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398602.2 ENST00000481837.1 |
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| CDS CCA 72 bp | CTTAACTCGAATCCAAAGAAACTGCATCCAGGGCTCTaGGCACAGCGAGCCTCCCCTAAGATCTGCCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LNSNPKKLHPGL*AQRASPKICRD Trigger: GTCACGGCAGATCTTAGGGGAGGCTCGCTGTGCCCAGAGCCCTGGATGCAGTTTCTTTGGATTCGAGTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481837.1 |
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| CDS TCA 72 bp | CATCAGGCTCCCCGTTGCTGGCCGAATAGTACTCTATaGCCGTCCTATATACACTGTAGCCCAACTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HQAPRCWPNSTL*PSYIHCSPTAC Trigger: ACAAGCAGTTGGGCTACAGTGTATATAGGACGGTCATAGAGTACTATTCGGCCAGCAACGGGGAGCCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000334982.9 ENST00000398602.2 ENST00000463154.5 ENST00000480550.1 ENST00000484480.5 |
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| CDS GCA 72 bp | GTGACTCCTCACAGAGGAAAGGTGTGTACACCGGGGTaGGCAGCTACAGTAACTAAACTTGCAAACACTAAC | + |
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Preference number: 6 (lower is better) Translates to: VTPHRGKVCTPG*AATVTKLANTN Trigger: GTTAGTGTTTGCAAGTTTAGTTACTGTAGCTGCGCACCCCGGTGTACACACCTTTCCTCTGTGAGGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481837.1 |
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