RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for N6AMT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156239

Ensembl transcript IDs: ENST00000303775.10, ENST00000351429.7, ENST00000460212.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGGGGAATGGTGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTaGTGGCAGACTGGGCACTCAGAGATAGCCTTGGCCAGGTCAGCC +
Preference number: 1 (lower is better)
Translates to: PWGMVSYQGLSVGLC*WQTGHSEIALARSA
Trigger: GGCTGACCTGGCCAAGGCTATCTCTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACACCATTCCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 90 bp TGGGGAATGGTGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTaGCAGACTGGGCACTCAGAGATAGCCTTGGCCAGGTCAGCCTTG +
Preference number: 1 (lower is better)
Translates to: WGMVSYQGLSVGLCC*QTGHSEIALARSAL
Trigger: CAAGGCTGACCTGGCCAAGGCTATCTCTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACACCATTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp TATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATATaGCCCAAGTGGCAGAGCAGCTTGCACAGCAGCCTGGACCTGTTG +
Preference number: 1 (lower is better)
Translates to: YLPLPLKHHWICWII*PKWQSSLHSSLDLL
Trigger: CAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTTGGGTCATATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp ACCACTGGATCTGCTGGATCATATGACCCAAGTGGCAGAGCAGCTTaGACAGCAGCCTGGACCTGTTGCAGACTCTTTTCTTGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: TTGSAGSYDPSGRAA*TAAWTCCRLFSCSG
Trigger: CCCAGAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTTGGGTCATATGATCCAGCAGATCCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp GACCTGCCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTaGAACACCACTGGATCTGCTGGATCATATGACCCAAGTGGCAGA +
Preference number: 1 (lower is better)
Translates to: DLPEASNSIPICHCH*NTTGSAGSYDPSGR
Trigger: TCTGCCACTTGGGTCATATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp CTAAGTCTTCTCTTTCTCTGTCAGCTGATCACAGGGAAGTCCCCATaGAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGTAGCAGAA +
Preference number: 1 (lower is better)
Translates to: LSLLFLCQLITGKSP*SHRCRLEERRQVAE
Trigger: TTCTGCTACCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGACAGAGAAAGAGAAGACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp CAGGAGGATTTCCCTTCACCACTGTCCTTCAAGGTAGCCCAGAGGTaGGATGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCAT +
Preference number: 1 (lower is better)
Translates to: QEDFPSPLSFKVAQR*DVVLQLSTLGWYLH
Trigger: ATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACATCTCACCTCTGGGCTACCTTGAAGGACAGTGGTGAAGGGAAATCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp TATGACCCAAGTGGCAGAGCAGCTTGCACAGCAGCCTGGACCTGTTaGAGACTCTTTTCTTGTTCTGGGCCCTACTCAAAACTAGCAGCT +
Preference number: 1 (lower is better)
Translates to: YDPSGRAACTAAWTC*RLFSCSGPYSKLAA
Trigger: AGCTGCTAGTTTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTTGGGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 90 bp GCTGGATCATATGACCCAAGTGGCAGAGCAGCTTGCACAGCAGCCTaGACCTGTTGCAGACTCTTTTCTTGTTCTGGGCCCTACTCAAAA +
Preference number: 1 (lower is better)
Translates to: AGSYDPSGRAACTAA*TCCRLFSCSGPYSK
Trigger: TTTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTTGGGTCATATGATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 90 bp TGTAATGAACCTGCCACTAGGCAACTGACTGATGACCCTGGGGAATaGTGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGA +
Preference number: 1 (lower is better)
Translates to: CNEPATRQLTDDPGE*CHIRGSVLVSVAGR
Trigger: TCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACACCATTCCCCAGGGTCATCAGTCAGTTGCCTAGTGGCAGGTTCATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp CTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATaGCCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTG +
Preference number: 1 (lower is better)
Translates to: LSQWACSFRQATCAQ*PRQVRGSPGTLLYL
Trigger: CAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR GCA 90 bp TGGGGACTACGGAAATTTGGCCTACTTCTTCATGTAACTTCCTTGTaGCTTCAGGGCCTCTCAGGCCCAATCATGTGTATACCACTTCCA +
Preference number: 1 (lower is better)
Translates to: WGLRKFGLLLHVTSL*LQGLSGPIMCIPLP
Trigger: TGGAAGTGGTATACACATGATTGGGCCTGAGAGGCCCTGAAGGCACAAGGAAGTTACATGAAGAAGTAGGCCAAATTTCCGTAGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp CGGCTTTGCTCTAAAATCCTAAACCAAGATTCACCTATAGGGACCTaGCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTGAA +
Preference number: 1 (lower is better)
Translates to: RLCSKILNQDSPIGT*QKLQTASLSATATE
Trigger: TTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGCAGGTCCCTATAGGTGAATCTTGGTTTAGGATTTTAGAGCAAAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 90 bp ATTTACGCCCTCAACAAACTGGATGATGTCCACCCACCTTGGGGATaGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTG +
Preference number: 1 (lower is better)
Translates to: IYALNKLDDVHPPWG*LSPLLSPPVQMQIL
Trigger: CAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCCCAAGGTGGGTGGACATCATCCAGTTTGTTGAGGGCGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp AGTCAGGAACAATCACCCAGCCAGCACTGTAACTCATTTGTCTATTaGGTTAGAGGCATAAGAAGCCCCAAATGGCTGAGGAGCAGTCTT +
Preference number: 1 (lower is better)
Translates to: SQEQSPSQHCNSFVY*VRGIRSPKWLRSSL
Trigger: AAGACTGCTCCTCAGCCATTTGGGGCTTCTTATGCCTCTAACTCAATAGACAAATGAGTTACAGTGCTGGCTGGGTGATTGTTCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp CAGGCCCAATCATGTGTATACCACTTCCATCTGATGACAGAGTGTTaGTGTGCATATCCAACTTTGTGCGTTGGTGGCTCAGATAACATC +
Preference number: 1 (lower is better)
Translates to: QAQSCVYHFHLMTEC*CAYPTLCVGGSDNI
Trigger: GATGTTATCTGAGCCACCAACGCACAAAGTTGGATATGCACAGCAACACTCTGTCATCAGATGGAAGTGGTATACACATGATTGGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp GAATATCTGGCTATTTTTCCTTCTAAGCAAAGTCAACAGGGGGACTaGTCAAAGTTGTGTCCACCAGGAGGATTTCCCTTCACCACTGTC +
Preference number: 1 (lower is better)
Translates to: EYLAIFPSKQSQQGD*SKLCPPGGFPFTTV
Trigger: GACAGTGGTGAAGGGAAATCCTCCTGGTGGACACAACTTTGAGCAGTCCCCCTGTTGACTTTGCTTAGAAGGAAAAATAGCCAGATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp AAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTaGCTGTCACCTTTCTCTTTCATAGCTAGCTGTTTTATAGATTGG +
Preference number: 1 (lower is better)
Translates to: KSEALQEPFSICLGL*LSPFSFIASCFIDW
Trigger: CCAATCTATAAAACAGCTAGCTATGAAAGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR CCA 90 bp ATGGCTACTTTGCTCATGAAACAATTGGGTGATGACAGGTGTGGCTaGAGAAAGAGGCCTACTAGTATCCACAGAACAGGTTATCTTGTC +
Preference number: 1 (lower is better)
Translates to: MATLLMKQLGDDRCG*RKRPTSIHRTGYLV
Trigger: GACAAGATAACCTGTTCTGTGGATACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATCACCCAATTGTTTCATGAGCAAAGTAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp CATAGACAGTCTTCTAGAGAACCTTGTCCCAGCCCTACAAGGCACTaGTATATAGCTGGTGTTATTACTGTCTTCAAAATGCCATTCCAC +
Preference number: 1 (lower is better)
Translates to: HRQSSREPCPSPTRH*YIAGVITVFKMPFH
Trigger: GTGGAATGGCATTTTGAAGACAGTAATAACACCAGCTATATAGCAGTGCCTTGTAGGGCTGGGACAAGGTTCTCTAGAAGACTGTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 90 bp AACTCCCTGACCATCCAGCCAAACCACTGGCCACGGCCTATGAATTaGCATATAATTGAATATCTGGCTATTTTTCCTTCTAAGCAAAGT +
Preference number: 1 (lower is better)
Translates to: NSLTIQPNHWPRPMN*HIIEYLAIFPSKQS
Trigger: ACTTTGCTTAGAAGGAAAAATAGCCAGATATTCAATTATATGCCAATTCATAGGCCGTGGCCAGTGGTTTGGCTGGATGGTCAGGGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp CCATGTCACTGGATCCCTACCAATTTCACTAAGGTAGAAGGCCCTTaGATTGTAGTCATATTTATTTCCTACCCTCTGATGCAAATGTCT +
Preference number: 1 (lower is better)
Translates to: PCHWIPTNFTKVEGP*IVVIFISYPLMQMS
Trigger: AGACATTTGCATCAGAGGGTAGGAAATAAATATGACTACAATTCAAGGGCCTTCTACCTTAGTGAAATTGGTAGGGATCCAGTGACATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp CCTTTGGTGAGCATTCACATGGGGCACAAATATCTTCACCCTTTTTaGCCATTCAGTGTCTATCCACATACTTCATCTCCAAATTTCTTT +
Preference number: 1 (lower is better)
Translates to: PLVSIHMGHKYLHPF*PFSVYPHTSSPNFF
Trigger: AAAGAAATTTGGAGATGAAGTATGTGGATAGACACTGAATGGGCAAAAAGGGTGAAGATATTTGTGCCCCATGTGAATGCTCACCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATaGCCTAAGGAATCCTGTGTATTCCCAACATACTTTACCTTACCA +
Preference number: 1 (lower is better)
Translates to: SFPLTLITGHDNTKR*PKESCVFPTYFTLP
Trigger: TGGTAAGGTAAAGTATGTTGGGAATACACAGGATTCCTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 90 bp TATTACTGTCTTCAAAATGCCATTCCACTGCTCTATGTAGCCAGTTaGTTCAAGATAGTAGGGAACATGGTAAGAAAATTCCATGATCAT +
Preference number: 1 (lower is better)
Translates to: YYCLQNAIPLLYVAS*FKIVGNMVRKFHDH
Trigger: ATGATCATGGAATTTTCTTACCATGTTCCCTACTATCTTGAATCAACTGGCTACATAGAGCAGTGGAATGGCATTTTGAAGACAGTAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 90 bp TTGTGCCTGTCACCTTTCTCTTTCATAGCTAGCTGTTTTATAGATTaGTCTAATATATCTTTTACCAGTACTACAAGAAAGTGGCTTACA +
Preference number: 1 (lower is better)
Translates to: LCLSPFSFIASCFID*SNISFTSTTRKWLT
Trigger: TGTAAGCCACTTTCTTGTAGTACTGGTAAAAGATATATTAGACCAATCTATAAAACAGCTAGCTATGAAAGAGAAAGGTGACAGGCACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGCATGTAACTTCCTTGTaGCTTCAGGGCCTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SQGSPHEATDAGWKREGRHVTSL*LQGLSG
Trigger: GCCTGAGAGGCCCTGAAGGCACAAGGAAGTTACATG...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGCTTGCACAGCAGCCTaGACCTGTTGCAGACTCTTT +
Preference number: 2 (lower is better)
Translates to: SQGSPHEATDAGWKREGRACTAA*TCCRLF
Trigger: AAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGGCTGGCCCTGCCATCTaGAAGCAAACTGCCTTTATG +
Preference number: 2 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQAGPAI*KQTAFM
Trigger: CATAAAGGCAGTTTGCTTTCAGATGGCAGGGCCAGC...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCATCTGCTGGATCATATaGCCCAAGTGGCAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: EALQEPFSICLGLCLSPFICWII*PKWQSS
Trigger: GCTGCTCTGCCACTTGGGTCATATGATCCAGCAGAT...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGTAGTTCCTACTTCTTaGTCACTAGGTCAAATCAGC +
Preference number: 2 (lower is better)
Translates to: SQGSPHEATDAGWKREGRVVPTS*SLGQIS
Trigger: GCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTAC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATGAAGGTGTGTTGCTaGCCCTGCCATCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: ARSFKQHPYLPLPLKHHWMKVCC*PCHLKA
Trigger: TGCTTTCAGATGGCAGGGCCAGCAACACACCTTCAT...CCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGCTTGCACAGCAGCCTaGACCTGTTGCAGACTCTTT +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSACTAA*TCCRLF
Trigger: AAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGC...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGAAATTGGAAAATGTTaGCTCCAAAACCCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: SQGSPHEATDAGWKREGREIGKC*LQNPKR
Trigger: CCTCTTTGGGTTTTGGAGGCAACATTTTCCAATTTC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTAGTGGCAGAGCAGCTTaGACAGCAGCCTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: GMAISFTESPSSNANLVCSGRAA*TAAWTC
Trigger: ACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACT...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGATGACAGGTGTGGCTaGAGAAAGAGGCCTACTAGT +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSDDRCG*RKRPTS
Trigger: ACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATC...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTCACCCACCTTGGGGATaGCTATCTCCTTTACTGAGT +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSHPPWG*LSPLLS
Trigger: ACTCAGTAAAGGAGATAGCCATCCCCAAGGTGGGTG...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp GTCACCAGGGCTAATAGCGAATGGTGTCCTTCCTATTCTGACCCCTaGATTCCTGGACCTGTGAATCCCAGTCATAAGAGAAATGCACCA +
Preference number: 2 (lower is better)
Translates to: VTRANSEWCPSYSDP*IPGPVNPSHKRNAP
Trigger: TGGTGCATTTCTCTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACACCATTCGCTATTAGCCCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGTATCTTCACCCTTTTTaGCCATTCAGTGTCTATCCA +
Preference number: 2 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQYLHPF*PFSVYP
Trigger: TGGATAGACACTGAATGGGCAAAAAGGGTGAAGATA...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTATGAAGGTGTGTTGCTaGCCCTGCCATCTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAMKVCC*PCHLKA
Trigger: TGCTTTCAGATGGCAGGGCCAGCAACACACCTTCAT...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTGATGACAGGTGTGGCTaGAGAAAGAGGCCTACTAGT +
Preference number: 2 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFADDRCG*RKRPTS
Trigger: ACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATC...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp AGACCCAGGAAGGCCTGTGGTATAATTCAGTCTGAATCCAAAGGCTaGAGAACCAGGGAAGCCAGTGATGTAAATCCATCTGAGGACAGA +
Preference number: 2 (lower is better)
Translates to: RPRKACGIIQSESKG*RTREASDVNPSEDR
Trigger: TCTGTCCTCAGATGGATTTACATCACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGACTGAATTATACCACAGGCCTTCCTGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTGGAGGACATACTTATaGCAATCACAGTCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: EALQEPFSICLGLCLSPFWRTYL*QSQSVF
Trigger: AAACACAGACTGTGATTGTCATAAGTATGTCCTCCA...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGATTGCGTCTCTCAGTaGAAAATATTCCACCCTATG +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSDCVSQ*KIFHPM
Trigger: CATAGGGTGGAATATTTTCCACTGAGAGACGCAATC...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp TTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTaGCTCATGAAACAATTGGGTGATGACAGGTGTGGCTGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LLSPCITSILVTMAT*LMKQLGDDRCGWRK
Trigger: CTTTCTCCAGCCACACCTGTCATCACCCAATTGTTTCATGAGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGTAATGGCACGGCTTTaGTCTAAAATCCTAAACCAA +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSVMARL*SKILNQ
Trigger: TTGGTTTAGGATTTTAGAGCAAAGCCGTGCCATTAC...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGGACAGAGTGTTGCTGTaGATATCCAACTTTGTGCGT +
Preference number: 2 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKDRVLL*ISNFVR
Trigger: ACGCACAAAGTTGGATATGCACAGCAACACTCTGTC...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTCATGCCCCATGTCACTaGATCCCTACCAATTTCACT +
Preference number: 2 (lower is better)
Translates to: GMAISFTESPSSNANLVCHAPCH*IPTNFT
Trigger: AGTGAAATTGGTAGGGATCCAGTGACATGGGGCATG...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTATATTTGGCACCCTGTaGCCTATTCAAGTTGACATA +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSIFGTL*PIQVDI
Trigger: TATGTCAACTTGAATAGGCCACAGGGTGCCAAATAT...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp TGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCATATCATACAGAACACATAACATCCAGTTCATaGTGGGAAGCTCAGGTTGCA +
Preference number: 2 (lower is better)
Translates to: CSAAAIHFRVVPAYHTEHITSSS*WEAQVA
Trigger: TGCAACCTGAGCTTCCCATCATGAACTGGATGTTAT...GTGTTCTGTATGATATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTCCACGGCCTATGAATTaGCATATAATTGAATATCTG +
Preference number: 2 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSPRPMN*HIIEYL
Trigger: CAGATATTCAATTATATGCCAATTCATAGGCCGTGG...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp CATACTTCATCTCCAAATTTCTTTGTCACCAATTTTCCAGTTATATaGAACTCCCTGACCATCCAGCCAAACCACTGGCCACGGCCTATG +
Preference number: 2 (lower is better)
Translates to: HTSSPNFFVTNFPVI*NSLTIQPNHWPRPM
Trigger: CATAGGCCGTGGCCAGTGGTTTGGCTGGATGGTCAGGGAGTTCAATATAACTGGAAAATTGGTGACAAAGAAATTTGGAGATGAAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp ATAACCTCTATTCTTGTCACCATGGCTACTTTGCTCATGAAACAATaGGGTGATGACAGGTGTGGCTGGAGAAAGAGGCCTACTAGTATC +
Preference number: 2 (lower is better)
Translates to: ITSILVTMATLLMKQ*GDDRCGWRKRPTSI
Trigger: GATACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATCACCCAATTGTTTCATGAGCAAAGTAGCCATGGTGACAAGAATAGAGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGTTATTTCCTACCCTCTaGTGCAAATGTCTTTCCACT +
Preference number: 2 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKLFPTL*CKCLST
Trigger: AGTGGAAAGACATTTGCATCAGAGGGTAGGAAATAA...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTCCAAACCTTCATTCCTaGAAGGTCTGGATCATTAGT +
Preference number: 2 (lower is better)
Translates to: GMAISFTESPSSNANLVCPNLHS*KVWIIS
Trigger: ACTAATGATCCAGACCTTTCAGGAATGAAGGTTTGG...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCACTGAATCCAAAGGCTTaGGAACCAGGGAAGCCAGTG +
Preference number: 2 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWALNPKA*EPGKPV
Trigger: CACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAG...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR-3UTR GCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTTATCTTCACCCTTTTTaGCCATTCAGTGTCTATCCA +
Preference number: 2 (lower is better)
Translates to: GMAISFTESPSSNANLVCYLHPF*PFSVYP
Trigger: TGGATAGACACTGAATGGGCAAAAAGGGTGAAGATA...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGGCACTGCTATATAGCTaGTGTTATTACTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKALLYS*CYYCLQ
Trigger: TTGAAGACAGTAATAACACCAGCTATATAGCAGTGC...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CCA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTGATTGCGTCTCTCAGTaGAAAATATTCCACCCTATG +
Preference number: 2 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFDCVSQ*KIFHPM
Trigger: CATAGGGTGGAATATTTTCCACTGAGAGACGCAATC...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp CCCTTTGGTGAGCATTCACATGGGGCACAAATATCTTCACCCTTTTaGCCCATTCAGTGTCTATCCACATACTTCATCTCCAAATTTCTT +
Preference number: 2 (lower is better)
Translates to: PFGEHSHGAQISSPF*PIQCLSTYFISKFL
Trigger: AAGAAATTTGGAGATGAAGTATGTGGATAGACACTGAATGGGCAAAAAGGGTGAAGATATTTGTGCCCCATGTGAATGCTCACCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp TCTGGATCATTAGTGGTCCTGTCTGAATTAGGCTGTAGTTTTCCATaGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAG +
Preference number: 2 (lower is better)
Translates to: SGSLVVLSELGCSFP*TLITGHDNTKRCPK
Trigger: CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACTACAGCCTAATTCAGACAGGACCACTAATGATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTACTTTTGCTGTGAACTaGGTTTCTTGTAATGCTGTG +
Preference number: 2 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFTFAVN*VSCNAV
Trigger: CACAGCATTACAAGAAACTCAGTTCACAGCAAAAGT...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCAACAATGAAGGTGTGTTaGTGGCCCTGCCATCTGAAA +
Preference number: 2 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWATMKVC*WPCHLK
Trigger: TTTCAGATGGCAGGGCCAGCAACACACCTTCATTGT...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR GCA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTGAAATTGGAAAATGTTaGCTCCAAAACCCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFEIGKC*LQNPKR
Trigger: CCTCTTTGGGTTTTGGAGGCAACATTTTCCAATTTC...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 90 bp ATGATCAAAGCTAGTATTTATTCCACCATTTATTCTGTATTCCCTTaGCCTTCAGCAAGCACTTCATCTGGTCATGGTACTTACCTGGTG +
Preference number: 2 (lower is better)
Translates to: MIKASIYSTIYSVFP*PSASTSSGHGTYLV
Trigger: CACCAGGTAAGTACCATGACCAGATGAAGTGCTTGCTGAAGGCAAAGGGAATACAGAATAAATGGTGGAATAAATACTAGCTTTGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR TCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCACTCTATGTAGCCAGTTaGTTCAAGATAGTAGGGAAC +
Preference number: 2 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWALYVAS*FKIVGN
Trigger: GTTCCCTACTATCTTGAATCAACTGGCTACATAGAG...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp CACCACACACGAGCTGAAGAGGCACGGCTTCTCCCCTaGATAAGGAGCAAACTCCTCGTGGCTCCACCCCAT +
Preference number: 3 (lower is better)
Translates to: HHTRAEEARLLP*IRSKLLVAPPH
Trigger: ATGGGGTGGAGCCACGAGGAGTTTGCTCCTTATGCAGGGGAGAAGCCGTGCCTCTTCAGCTCGTGTGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR CCA 72 bp TCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTaGGCACTCAGAGATAGCCTTGGCCAGGTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: SGAQCWSLLLAD*ALRDSLGQVSL
Trigger: AAGGCTGACCTGGCCAAGGCTATCTCTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCAAGTGGCAGAGCAGCTaGCACAGCAGCCTGGACCTG +
Preference number: 3 (lower is better)
Translates to: EALQEPFSICLGLCLSPFKWQSS*HSSLDL
Trigger: CAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTT...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp GTGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTaGCAGACTGGGCACTCAGAGATAGCCTTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: VSYQGLSVGLCC*QTGHSEIALAR
Trigger: CCTGGCCAAGGCTATCTCTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp CTCTTTCTCTGTCAGCTGATCACAGGGAAGTCCCCATaGAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: LFLCQLITGKSP*SHRCRLEERRQ
Trigger: CTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGACAGAGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp TATGACCCAAGTGGCAGAGCAGCTTGCACAGCAGCCTaGACCTGTTGCAGACTCTTTTCTTGTTCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: YDPSGRAACTAA*TCCRLFSCSGP
Trigger: GGGCCCAGAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTTGGGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp ACCCTGGGGAATGGTGTCATATCAGGGGCTCAGTGTTaGTCTCTGTTGCTGGCAGACTGGGCACTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: TLGNGVISGAQC*SLLLADWALRD
Trigger: ATCTCTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACACCATTCCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp TGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATaGCCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTT +
Preference number: 3 (lower is better)
Translates to: WACSFRQATCAQ*PRQVRGSPGTL
Trigger: AAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR GCA 72 bp GGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATaGCAGGCCACCACACACGAGCTGAAGAGGCACGGC +
Preference number: 3 (lower is better)
Translates to: GPSCRFYTSQIE*QATTHELKRHG
Trigger: GCCGTGCCTCTTCAGCTCGTGTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR CCA 72 bp CCTGCCACTAGGCAACTGACTGATGACCCTGGGGAATaGTGTCATATCAGGGGCTCAGTGTTGGTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: PATRQLTDDPGE*CHIRGSVLVSV
Trigger: AACAGAGACCAACACTGAGCCCCTGATATGACACCATTCCCCAGGGTCATCAGTCAGTTGCCTAGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTAAGTGGCAGAGCAGCTaGCACAGCAGCCTGGACCTG +
Preference number: 3 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAKWQSS*HSSLDL
Trigger: CAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTT...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp TTCCCTTCACCACTGTCCTTCAAGGTAGCCCAGAGGTaGGATGTAGTGCTGCAGCTATCCACTTTAGGGTGG +
Preference number: 3 (lower is better)
Translates to: FPSPLSFKVAQR*DVVLQLSTLGW
Trigger: CCACCCTAAAGTGGATAGCTGCAGCACTACATCTCACCTCTGGGCTACCTTGAAGGACAGTGGTGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp AGTGGCAGAGCAGCTTGCACAGCAGCCTGGACCTGTTaGAGACTCTTTTCTTGTTCTGGGCCCTACTCAAAA +
Preference number: 3 (lower is better)
Translates to: SGRAACTAAWTC*RLFSCSGPYSK
Trigger: TTTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp TCTGCTGGATCATATGACCCAAGTGGCAGAGCAGCTTaGACAGCAGCCTGGACCTGTTGCAGACTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SAGSYDPSGRAA*TAAWTCCRLFS
Trigger: AGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTTGGGTCATATGATCCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGTGTAGTTCCTACTTCTaGCTCACTAGGTCAAATCAG +
Preference number: 3 (lower is better)
Translates to: SADHREVPMKPPMQAGRECSSYF*LTRSNQ
Trigger: CTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACA...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGTATTGTGCCTCTTTCTaGGTTTTAAGAGCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: SQGSPHEATDAGWKREGRYCASF*VLRAAR
Trigger: TCTTGCTGCTCTTAAAACCAAGAAAGAGGCACAATA...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTAGCAGCCTGGACCTGTaGCAGACTCTTTTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSSSLDL*QTLFLF
Trigger: GAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCT...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGTCTGATGACAGAGTGTaGCTGTGCATATCCAACTTT +
Preference number: 3 (lower is better)
Translates to: SADHREVPMKPPMQAGRESDDRV*LCISNF
Trigger: AAAGTTGGATATGCACAGCAACACTCTGTCATCAGA...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp TCCTCGTGGCTCCACCCCATGTGTGGGCGCTTAGTCTaGGCCACATTGATTTATTTCCCTTACTGCACATGT +
Preference number: 3 (lower is better)
Translates to: SSWLHPMCGRLV*ATLIYFPYCTC
Trigger: ACATGTGCAGTAAGGGAAATAAATCAATGTGGCTCAGACTAAGCGCCCACACATGGGGTGGAGCCACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR TCA 72 bp AGGTGGATCAATGTAATGAACCTGCCACTAGGCAACTaGCTGATGACCCTGGGGAATGGTGTCATATCAGGG +
Preference number: 3 (lower is better)
Translates to: RWINVMNLPLGN*LMTLGNGVISG
Trigger: CCCTGATATGACACCATTCCCCAGGGTCATCAGTCAGTTGCCTAGTGGCAGGTTCATTACATTGATCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp CTCAACAAACTGGATGATGTCCACCCACCTTGGGGATaGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATG +
Preference number: 3 (lower is better)
Translates to: LNKLDDVHPPWG*LSPLLSPPVQM
Trigger: CATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCCCAAGGTGGGTGGACATCATCCAGTTTGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATAGCCAGATCAATTCCATaGCCTTACCACATAATGCTG +
Preference number: 3 (lower is better)
Translates to: QHPYLPLPLKHHWICWIIARSIP*PYHIML
Trigger: CAGCATTATGTGGTAAGGCAATGGAATTGATCTGGC...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGGCTGTAGTTTTCCATaGACCTTAATCACAGGGCAT +
Preference number: 3 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSGCSFP*TLITGH
Trigger: ATGCCCTGTGATTAAGGTCAATGGAAAACTACAGCC...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp CTGATACACACCGGAGATACGACAATGAAGGTGTGTTaGTGGCCCTGCCATCTGAAAGCAAACTGCCTTTAT +
Preference number: 3 (lower is better)
Translates to: LIHTGDTTMKVC*WPCHLKANCLY
Trigger: ATAAAGGCAGTTTGCTTTCAGATGGCAGGGCCAGCAACACACCTTCATTGTCGTATCTCCGGTGTGTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp ATACACACCGGAGATACGACAATGAAGGTGTGTTGCTaGCCCTGCCATCTGAAAGCAAACTGCCTTTATGGA +
Preference number: 3 (lower is better)
Translates to: IHTGDTTMKVCC*PCHLKANCLYG
Trigger: TCCATAAAGGCAGTTTGCTTTCAGATGGCAGGGCCAGCAACACACCTTCATTGTCGTATCTCCGGTGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp ATTCCCTTTGCCTTCAGCAAGCACTTCATCTGGTCATaGTACTTACCTGGTGGTGACCCAAACCTTCATTCC +
Preference number: 3 (lower is better)
Translates to: IPFAFSKHFIWS*YLPGGDPNLHS
Trigger: GGAATGAAGGTTTGGGTCACCACCAGGTAAGTACCATGACCAGATGAAGTGCTTGCTGAAGGCAAAGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGCACTCAGAGATAGCCTaGGCCAGGTCAGCCTTGGTG +
Preference number: 3 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKHSEIA*ARSALV
Trigger: CACCAAGGCTGACCTGGCCAAGGCTATCTCTGAGTG...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTCAGGAAGCAAAAATTTaGCTAGTGGGTCACCAGGGC +
Preference number: 3 (lower is better)
Translates to: GMAISFTESPSSNANLVCQEAKI*LVGHQG
Trigger: GCCCTGGTGACCCACTAGCAAAATTTTTGCTTCCTG...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCACACTCAGAGATAGCCTaGGCCAGGTCAGCCTTGGTG +
Preference number: 3 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAHSEIA*ARSALV
Trigger: CACCAAGGCTGACCTGGCCAAGGCTATCTCTGAGTG...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp CAATCACCCAGCCAGCACTGTAACTCATTTGTCTATTaGGTTAGAGGCATAAGAAGCCCCAAATGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: QSPSQHCNSFVY*VRGIRSPKWLR
Trigger: CCTCAGCCATTTGGGGCTTCTTATGCCTCTAACTCAATAGACAAATGAGTTACAGTGCTGGCTGGGTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp CAAGCACTTCATCTGGTCATGGTACTTACCTGGTGGTaGCCCAAACCTTCATTCCTGAAAGGTCTGGATCAT +
Preference number: 3 (lower is better)
Translates to: QALHLVMVLTWW*PKPSFLKGLDH
Trigger: ATGATCCAGACCTTTCAGGAATGAAGGTTTGGGTCACCACCAGGTAAGTACCATGACCAGATGAAGTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp TTGCTCATGAAACAATTGGGTGATGACAGGTGTGGCTaGAGAAAGAGGCCTACTAGTATCCACAGAACAGGT +
Preference number: 3 (lower is better)
Translates to: LLMKQLGDDRCG*RKRPTSIHRTG
Trigger: ACCTGTTCTGTGGATACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATCACCCAATTGTTTCATGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp TGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCATATCATACAGAACACTTGCAGACTCTTTTCTaGTTCTGGGCCCTACTCAAA +
Preference number: 3 (lower is better)
Translates to: CSAAAIHFRVVPAYHTEHLQTLF*FWALLK
Trigger: TTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAA...GTGTTCTGTATGATATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp TTCATGATGGGAAGCTCAGGTTGCACGGTAACTTGGTaGCTCATTAAGTATCAGTCTCTACTAAGGCCCAGT +
Preference number: 3 (lower is better)
Translates to: FMMGSSGCTVTW*LIKYQSLLRPS
Trigger: ACTGGGCCTTAGTAGAGACTGATACTTAATGAGTCACCAAGTTACCGTGCAACCTGAGCTTCCCATCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp TTCCATGATCATGGGCCCACTGCCACACTTTTGCTGTaGACTGAGTTTCTTGTAATGCTGTGTGGAATACCA +
Preference number: 3 (lower is better)
Translates to: FHDHGPTATLLL*TEFLVMLCGIP
Trigger: TGGTATTCCACACAGCATTACAAGAAACTCAGTTCACAGCAAAAGTGTGGCAGTGGGCCCATGATCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp CTGATGACAGAGTGTTGCTGTGCATATCCAACTTTGTaGGTTGGTGGCTCAGATAACATCCAGTTCATGATG +
Preference number: 3 (lower is better)
Translates to: LMTECCCAYPTL*VGGSDNIQFMM
Trigger: CATCATGAACTGGATGTTATCTGAGCCACCAACGCACAAAGTTGGATATGCACAGCAACACTCTGTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp ACCTTGTCCCAGCCCTACAAGGCACTGCTATATAGCTaGTGTTATTACTGTCTTCAAAATGCCATTCCACTG +
Preference number: 3 (lower is better)
Translates to: TLSQPYKALLYS*CYYCLQNAIPL
Trigger: CAGTGGAATGGCATTTTGAAGACAGTAATAACACCAGCTATATAGCAGTGCCTTGTAGGGCTGGGACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp CTATGTAAGACCTCTAGGCCAGCAGTGCATAAGTCATaGGAACAGGAAGCAAAAATTTTGCTAGTGGGTCAC +
Preference number: 3 (lower is better)
Translates to: LCKTSRPAVHKS*EQEAKILLVGH
Trigger: GTGACCCACTAGCAAAATTTTTGCTTCCTGTTCCCATGACTTATGCACTGCTGGCCTAGAGGTCTTACATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp TACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTaGGCATGTTCATTCAGGCAAGCCACGTGTGCACAA +
Preference number: 3 (lower is better)
Translates to: YCTCVEKWNLSQ*ACSFRQATCAQ
Trigger: TTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR-3UTR CAA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTTTGCAGACTCTTTTCTaGTTCTGGGCCCTACTCAAA +
Preference number: 3 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFLQTLF*FWALLK
Trigger: TTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAA...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGCAGGAAGCAAAAATTTaGCTAGTGGGTCACCAGGGC +
Preference number: 3 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKQEAKI*LVGHQG
Trigger: GCCCTGGTGACCCACTAGCAAAATTTTTGCTTCCTG...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCAGGAACCCTTCTCTATTaGCCTAGGCTTGTGCCTGTC +
Preference number: 3 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAGTLLY*PRLVPV
Trigger: GACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCC...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR GCA 72 bp TCTAAAATCCTAAACCAAGATTCACCTATAGGGACCTaGCAGAAGCTTCAAACAGCATCCCTATCTGCCACT +
Preference number: 3 (lower is better)
Translates to: SKILNQDSPIGT*QKLQTASLSAT
Trigger: AGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGCAGGTCCCTATAGGTGAATCTTGGTTTAGGATTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp ATTCAAGATAGTAGGGAACATGGTAAGAAAATTCCATaGTCATGGGCCCACTGCCACACTTTTGCTGTGAAC +
Preference number: 3 (lower is better)
Translates to: IQDSREHGKKIP*SWAHCHTFAVN
Trigger: GTTCACAGCAAAAGTGTGGCAGTGGGCCCATGATCATGGAATTTTCTTACCATGTTCCCTACTATCTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp GAAGCCAGTGATGTAAATCCATCTGAGGACAGAAGATaGGATGTCACAGCTCAAACAATGAGGCAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: EASDVNPSEDRR*DVTAQTMRQEK
Trigger: TTTTTCCTGCCTCATTGTTTGAGCTGTGACATCTCATCTTCTGTCCTCAGATGGATTTACATCACTGGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp TCTTCTAGAGAACCTTGTCCCAGCCCTACAAGGCACTaGTATATAGCTGGTGTTATTACTGTCTTCAAAATG +
Preference number: 3 (lower is better)
Translates to: SSREPCPSPTRH*YIAGVITVFKM
Trigger: CATTTTGAAGACAGTAATAACACCAGCTATATAGCAGTGCCTTGTAGGGCTGGGACAAGGTTCTCTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR-3UTR CAA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCATTTACCCTTGTCAACTaGGCACCCATAAACATCTCT +
Preference number: 3 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAFTLVN*APINIS
Trigger: AGAGATGTTTATGGGTGCCAAGTTGACAAGGGTAAA...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp TTGACCTTAATCACAGGGCATGATAACACTAAGAGATaGCCTAAGGAATCCTGTGTATTCCCAACATACTTT +
Preference number: 3 (lower is better)
Translates to: LTLITGHDNTKR*PKESCVFPTYF
Trigger: AAAGTATGTTGGGAATACACAGGATTCCTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR TCA 72 bp ATATCTTTTACCAGTACTACAAGAAAGTGGCTTACATaGTTATGGAGGCTAAGAGGTCCCATGATCTGTCAT +
Preference number: 3 (lower is better)
Translates to: ISFTSTTRKWLT*LWRLRGPMICH
Trigger: ATGACAGATCATGGGACCTCTTAGCCTCCATAATCATGTAAGCCACTTTCTTGTAGTACTGGTAAAAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR TCA 72 bp AGCCACATTGATTTATTTCCCTTACTGCACATGTGTTaGGAAATGGAATCTTTCACAGTGGGCATGTTCATT +
Preference number: 3 (lower is better)
Translates to: SHIDLFPLLHMC*EMESFTVGMFI
Trigger: AATGAACATGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAATCAATGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR GCA 72 bp TATTGTGCCTCTTTCTTGGTTTTAAGAGCAGCAAGATaGAAGTACTTATCCTTCACCGTAGAAGAAATATCC +
Preference number: 3 (lower is better)
Translates to: YCASFLVLRAAR*KYLSFTVEEIS
Trigger: GGATATTTCTTCTACGGTGAAGGATAAGTACTTGCATCTTGCTGCTCTTAAAACCAAGAAAGAGGCACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp AAAGAGACTAGTTATTTGTTGGTAATGGCACGGCTTTaGTCTAAAATCCTAAACCAAGATTCACCTATAGGG +
Preference number: 3 (lower is better)
Translates to: KETSYLLVMARL*SKILNQDSPIG
Trigger: CCCTATAGGTGAATCTTGGTTTAGGATTTTAGAGCAAAGCCGTGCCATTACCAACAAATAACTAGTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR GCA 72 bp CTAGTATTTATTCCACCATTTATTCTGTATTCCCTTTaGCTTCAGCAAGCACTTCATCTGGTCATGGTACTT +
Preference number: 3 (lower is better)
Translates to: LVFIPPFILYSL*LQQALHLVMVL
Trigger: AAGTACCATGACCAGATGAAGTGCTTGCTGAAGGCAAAGGGAATACAGAATAAATGGTGGAATAAATACTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CCA 72 bp TTGATTTATTTCCCTTACTGCACATGTGTTGAGAAATaGAATCTTTCACAGTGGGCATGTTCATTCAGGCAA +
Preference number: 3 (lower is better)
Translates to: LIYFPYCTCVEK*NLSQWACSFRQ
Trigger: TTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCGCTCGTACACGTCGCTaGAGGCGCCGCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: EALQEPFSICLGLCLSPFARTRR*RRRGPR
Trigger: ACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGC...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGCGGCCCACGTGCCCGTaGAACGGCGTAGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGRERPTCP*NGVAKF
Trigger: GAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCG...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGCTCGTACACGTCGCTaGAGGCGCCGCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSARTRR*RRRGPR
Trigger: ACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGC...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCAGCTCGTACACGTCGCTaGAGGCGCCGCGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPARTRR*RRRGPR
Trigger: ACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGC...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGAGTGGCAGAGCAGCTTaGACAGCAGCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRSGRAA*TAAWTC
Trigger: ACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACT...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGAGCGAAGTTCTCCCCTaGCATAGTCCTTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRSEVLP*HSPSLR
Trigger: ACGCAGCGAAGGACTATGGCAGGGGAGAACTTCGCT...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGCTGGCCCTGCCATCTaGAAGCAAACTGCCTTTATG +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRAGPAI*KQTAFM
Trigger: CATAAAGGCAGTTTGCTTTCAGATGGCAGGGCCAGC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGCAGTTCGGCAGCCGCTaGCTCCAGCGCGTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQTASLSATATETPLDLLQFGSR*LQRVQK
Trigger: CTTTTGGACGCGCTGGAGGCAGCGGCTGCCGAACTG...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGGCATATTTCCACTCCTaGCAGTTCGGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQAYFHS*QFGSRC
Trigger: GCAGCGGCTGCCGAACTGGCAGGAGTGGAAATATGC...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCACGGCCCACGTGCCCGTaGAACGGCGTAGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPRPTCP*NGVAKF
Trigger: GAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCG...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR CAA 72 bp CTCTGTTGCTGGCAGACTGGGCACTCAGAGATAGCCTaGGCCAGGTCAGCCTTGGTGAGTAGAAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LCCWQTGHSEIA*ARSALVSRSPR
Trigger: ACGTGGACTTCTACTCACCAAGGCTGACCTGGCCAAGGCTATCTCTGAGTGCCCAGTCTGCCAGCAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp GACCCTGGGGAATGGTGTCATATCAGGGGCTCAGTGTaGGTCTCTGTTGCTGGCAGACTGGGCACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: DPGEWCHIRGSV*VSVAGRLGTQR
Trigger: TCTCTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACACCATTCCCCAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCGCCACGTGTGCACAATaGCCTAGGCAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EALQEPFSICLGLCLSPFATCAQ*PRQVRG
Trigger: GCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGC...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGAGCGAAGTTCTCCCCTaGCATAGTCCTTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQSEVLP*HSPSLR
Trigger: ACGCAGCGAAGGACTATGGCAGGGGAGAACTTCGCT...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGCGGCCCACGTGCCCGTaGAACGGCGTAGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKRPTCP*NGVAKF
Trigger: GAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCG...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGGCTTGCACAGCAGCCTaGACCTGTTGCAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGREACTAA*TCCRLF
Trigger: AAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGC...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGTCTTTCTCTGTCAGCTaGTCACAGGGAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGRESFSVS*SQGSPH
Trigger: ATGGGGACTTCCCTGTGATCAGCTGACAGAGAAAGA...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGCTGAATCCAAAGGCTTaGGAACCAGGGAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQLNPKA*EPGKPV
Trigger: CACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAG...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCGCACGGCTTCTCCCCTaGATAAGGAGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: EALQEPFSICLGLCLSPFARLLP*IRSKLL
Trigger: GAGGAGTTTGCTCCTTATGCAGGGGAGAAGCCGTGC...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp GCCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGTCAGGGGCTCAGTGTTaGTCTCTGTTGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ARSFKQHPYLPLPLKHHWSGAQC*SLLLAD
Trigger: GTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGA...CCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCGCTGGCCCTGCCATCTaGAAGCAAACTGCCTTTATG +
Preference number: 4 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLAGPAI*KQTAFM
Trigger: CATAAAGGCAGTTTGCTTTCAGATGGCAGGGCCAGC...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGACGCCACGTGTGCACAATaGCCTAGGCAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GIFHSGHVHSGKPRVHNDATCAQ*PRQVRG
Trigger: GCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGC...GTCATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCAGCGAAGTTCTCCCCTaGCATAGTCCTTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICSEVLP*HSPSLR
Trigger: ACGCAGCGAAGGACTATGGCAGGGGAGAACTTCGCT...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTCAGTTCGGCAGCCGCTaGCTCCAGCGCGTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: GMAISFTESPSSNANLVCQFGSR*LQRVQK
Trigger: CTTTTGGACGCGCTGGAGGCAGCGGCTGCCGAACTG...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGACGTTGCTGAGCCCATaGATAACCTCTATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRTLLSP*ITSILV
Trigger: GACAAGAATAGAGGTTATGCATGGGCTCAGCAACGT...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGATGAAGGTGTGTTGCTaGCCCTGCCATCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQMKVCC*PCHLKA
Trigger: TGCTTTCAGATGGCAGGGCCAGCAACACACCTTCAT...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCGCTTGCACAGCAGCCTaGACCTGTTGCAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: EALQEPFSICLGLCLSPFACTAA*TCCRLF
Trigger: AAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGC...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGATGACAGGTGTGGCTaGAGAAAGAGGCCTACTAGT +
Preference number: 4 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQDDRCG*RKRPTS
Trigger: ACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATC...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp AAGTGGCAGAGCAGCTTGCACAGCAGCCTGGACCTGTaGCAGACTCTTTTCTTGTTCTGGGCCCTACTCAAA +
Preference number: 4 (lower is better)
Translates to: KWQSSLHSSLDL*QTLFLFWALLK
Trigger: TTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCAAGGTAGCCCAGAGGTaGGATGTAGTGCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICKVAQR*DVVLQL
Trigger: TAGCTGCAGCACTACATCTCACCTCTGGGCTACCTT...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGTTACACCTCACAAATTaGATGCCAGGCCACCACACA +
Preference number: 4 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQLHLTN*MPGHHT
Trigger: TGTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAA...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp AGAAATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACGCATATTTCCACTCCTaGCAGTTCGGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RNGIFHSGHVHSGKPRVHAYFHS*QFGSRC
Trigger: GCAGCGGCTGCCGAACTGGCAGGAGTGGAAATATGC...GTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGACAATGAAGGTGTGTTaGTGGCCCTGCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQTMKVC*WPCHLK
Trigger: TTTCAGATGGCAGGGCCAGCAACACACCTTCATTGT...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGAGTGGCAGAGCAGCTTaGACAGCAGCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKSGRAA*TAAWTC
Trigger: ACAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACT...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGACTCTTTTCTTGTTCTaGGCCCTACTCAAAACTAGC +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRTLFLF*ALLKTS
Trigger: GCTAGTTTTGAGTAGGGCCCAGAACAAGAAAAGAGT...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGGGACTACGGAAATTTaGCCTACTTCTTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRGTTEI*PTSSCN
Trigger: GTTACATGAAGAAGTAGGCCAAATTTCCGTAGTCCC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCATCAGGGGCTCAGTGTTaGTCTCTGTTGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPSGAQC*SLLLAD
Trigger: GTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGA...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGATTGCGTCTCTCAGTaGAAAATATTCCACCCTATG +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRDCVSQ*KIFHPM
Trigger: CATAGGGTGGAATATTTTCCACTGAGAGACGCAATC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GCCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGCTGTCATCTATAAGCTaGAGACCCAGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ARSFKQHPYLPLPLKHHWLSSIS*RPRKAC
Trigger: ACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAG...CCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCCTGTCATCTATAAGCTaGAGACCCAGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: EALQEPFSICLGLCLSPFLSSIS*RPRKAC
Trigger: ACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAG...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp AGGTCCCATGATCTGTCATCTATAAGCTGGAGACCCAGGAAGGCCTGTGGTATAAAGGTAGCCCAGAGGTaGGATGTAGTGCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: RSHDLSSISWRPRKACGIKVAQR*DVVLQL
Trigger: TAGCTGCAGCACTACATCTCACCTCTGGGCTACCTT...TATACCACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAGATCATGGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGTTGCTAACCCTTTGGTaGGCATTCACATGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LQTASLSATATETPLDLLLLTLW*AFTWGT
Trigger: TGTGCCCCATGTGAATGCTCACCAAAGGGTTAGCAA...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTGCATATTTCCACTCCTaGCAGTTCGGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GMAISFTESPSSNANLVCAYFHS*QFGSRC
Trigger: GCAGCGGCTGCCGAACTGGCAGGAGTGGAAATATGC...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGGTAATGGCACGGCTTTaGTCTAAAATCCTAAACCAA +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRVMARL*SKILNQ
Trigger: TTGGTTTAGGATTTTAGAGCAAAGCCGTGCCATTAC...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCACATGTAACTTCCTTGTaGCTTCAGGGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPHVTSL*LQGLSG
Trigger: GCCTGAGAGGCCCTGAAGGCACAAGGAAGTTACATG...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGATTTGCCTAGGCTTGTaGCTGTCACCTTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQICLGL*LSPFSF
Trigger: GAAAGAGAAAGGTGACAGGCACAAGCCTAGGCAAAT...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCGAACCCTTCTCTATTTaGCTAGGCTTGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLEPFSI*LGLCLS
Trigger: TGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTC...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGGCACGGCTTCTCCCCTaGATAAGGAGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKARLLP*IRSKLL
Trigger: GAGGAGTTTGCTCCTTATGCAGGGGAGAAGCCGTGC...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp ATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGGCACGGCTTCTCCCCTaGATAAGGAGCAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: MESFTVGMFIQASHVCTMARLLP*IRSKLL
Trigger: GAGGAGTTTGCTCCTTATGCAGGGGAGAAGCCGTGC...CATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGAGCAAGCACTTCATCTaGTCATGGTACTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQSKHFI*SWYLPG
Trigger: ACCAGGTAAGTACCATGACCAGATGAAGTGCTTGCT...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGATATTTGGCACCCTGTaGCCTATTCAAGTTGACATA +
Preference number: 4 (lower is better)
Translates to: SQGSPHEATDAGWKREGRIFGTL*PIQVDI
Trigger: TATGTCAACTTGAATAGGCCACAGGGTGCCAAATAT...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCGATGTCCACCCACCTTaGGGATGGCTATCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICDVHPP*GWLSPL
Trigger: TAAAGGAGATAGCCATCCCCAAGGTGGGTGGACATC...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp CCTTCTAAGCAAAGTCAACAGGGGGACTGCTCAAAGTaGTGTCCACCAGGAGGATTTCCCTTCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: PSKQSQQGDCSK*CPPGGFPFTTV
Trigger: GACAGTGGTGAAGGGAAATCCTCCTGGTGGACACAACTTTGAGCAGTCCCCCTGTTGACTTTGCTTAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGACTTGCTAACCCTTTGGTaGGCATTCACATGGGGCACA +
Preference number: 4 (lower is better)
Translates to: GIFHSGHVHSGKPRVHNDLLTLW*AFTWGT
Trigger: TGTGCCCCATGTGAATGCTCACCAAAGGGTTAGCAA...GTCATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGCTCTATGTAGCCAGTTaGTTCAAGATAGTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQLYVAS*FKIVGN
Trigger: GTTCCCTACTATCTTGAATCAACTGGCTACATAGAG...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGTGGAGGACATACTTATaGCAATCACAGTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGREWRTYL*QSQSVF
Trigger: AAACACAGACTGTGATTGTCATAAGTATGTCCTCCA...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp ATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGCTGAATCCAAAGGCTTaGGAACCAGGGAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: MESFTVGMFIQASHVCTMLNPKA*EPGKPV
Trigger: CACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAG...CATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGTGGTATAATTCAGTCTaGATCCAAAGGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGREWYNSV*IQRLEN
Trigger: GTTCTCAAGCCTTTGGATTCAGACTGAATTATACCA...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATATTACACCTCACAAATTaGATGCCAGGCCACCACACA +
Preference number: 4 (lower is better)
Translates to: QHPYLPLPLKHHWICWIILHLTN*MPGHHT
Trigger: TGTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAA...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGGAAATTGGAAAATGTTaGCTCCAAAACCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGREEIGKC*LQNPKR
Trigger: CCTCTTTGGGTTTTGGAGGCAACATTTTCCAATTTC...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCGAACCCTTCTCTATTTaGCTAGGCTTGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICEPFSI*LGLCLS
Trigger: TGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTC...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGCATGCCCCATGTCACTaGATCCCTACCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: LQTASLSATATETPLDLLHAPCH*IPTNFT
Trigger: AGTGAAATTGGTAGGGATCCAGTGACATGGGGCATG...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCACTGTCATCTATAAGCTaGAGACCCAGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPLSSIS*RPRKAC
Trigger: ACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAG...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGACATGTGTTGAGAAATaGAATCTTTCACAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SADHREVPMKPPMQAGRETCVEK*NLSQWA
Trigger: TGCCCACTGTGAAAGATTCCATTTCTCAACACATGT...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp GCTGATACACACCGGAGATACGACAATGAAGGTGTGTaGCTGGCCCTGCCATCTGAAAGCAAACTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ADTHRRYDNEGV*LALPSESKLPL
Trigger: TAAAGGCAGTTTGCTTTCAGATGGCAGGGCCAGCAACACACCTTCATTGTCGTATCTCCGGTGTGTATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATAATAACATCCAGTTCATaGTGGGAAGCTCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: QHPYLPLPLKHHWICWIIITSSS*WEAQVA
Trigger: TGCAACCTGAGCTTCCCATCATGAACTGGATGTTAT...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCAGAAATATCCTAACATaGCCCATGTCACTGGATCCC +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICRNILT*PMSLDP
Trigger: GGGATCCAGTGACATGGGGCATGTTAGGATATTTCT...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGGTAATGGCACGGCTTTaGTCTAAAATCCTAAACCAA +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQVMARL*SKILNQ
Trigger: TTGGTTTAGGATTTTAGAGCAAAGCCGTGCCATTAC...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGGTCCCATGATCTGTCATCTATAAGCTGGAGACCCAGGAAGGCCTGTGGTATAGAACCCTTCTCTATTTaGCTAGGCTTGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RSHDLSSISWRPRKACGIEPFSI*LGLCLS
Trigger: TGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTC...TATACCACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAGATCATGGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTCACCCACCTTGGGGATaGCTATCTCCTTTACTGAGT +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAHPPWG*LSPLLS
Trigger: ACTCAGTAAAGGAGATAGCCATCCCCAAGGTGGGTG...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTGATGTCCACCCACCTTaGGGATGGCTATCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFADVHPP*GWLSPL
Trigger: TAAAGGAGATAGCCATCCCCAAGGTGGGTGGACATC...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCACTTTTGCTGTGAACTaGGTTTCTTGTAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLTFAVN*VSCNAV
Trigger: CACAGCATTACAAGAAACTCAGTTCACAGCAAAAGT...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGCTCTATGTAGCCAGTTaGTTCAAGATAGTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LQTASLSATATETPLDLLLYVAS*FKIVGN
Trigger: GTTCCCTACTATCTTGAATCAACTGGCTACATAGAG...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGAACTCATTTGTCTATTaGGTTAGAGGCATAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQNSFVY*VRGIRS
Trigger: GCTTCTTATGCCTCTAACTCAATAGACAAATGAGTT...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGGTATAATTCAGTCTaGATCCAAAGGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLWYNSV*IQRLEN
Trigger: GTTCTCAAGCCTTTGGATTCAGACTGAATTATACCA...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGTTACTGCACATGTGTTaGGAAATGGAATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQLLHMC*EMESFT
Trigger: TGTGAAAGATTCCATTTCTCAACACATGTGCAGTAA...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp AGAAATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACTTACACCTCACAAATTaGATGCCAGGCCACCACACA +
Preference number: 4 (lower is better)
Translates to: RNGIFHSGHVHSGKPRVHLHLTN*MPGHHT
Trigger: TGTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAA...GTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTGCTGCCTCTATTCCGTaGCTTCCTACCAAATCTGTA +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAAASIP*LPTKSV
Trigger: TACAGATTTGGTAGGAAGTCACGGAATAGAGGCAGC...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351429.7
CDS-3UTR GCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGACAATGAAGGTGTGTTaGTGGCCCTGCCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKTMKVC*WPCHLK
Trigger: TTTCAGATGGCAGGGCCAGCAACACACCTTCATTGT...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGTAGTTCCTACTTCTTaGTCACTAGGTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: LQTASLSATATETPLDLLVVPTS*SLGQIS
Trigger: GCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTAC...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGGTCCCATGATCTGTCATCTATAAGCTGGAGACCCAGGAAGGCCTGTGGTATAAGAAATATCCTAACATaGCCCATGTCACTGGATCCC +
Preference number: 4 (lower is better)
Translates to: RSHDLSSISWRPRKACGIRNILT*PMSLDP
Trigger: GGGATCCAGTGACATGGGGCATGTTAGGATATTTCT...TATACCACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAGATCATGGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGGTCCCATGATCTGTCATCTATAAGCTGGAGACCCAGGAAGGCCTGTGGTATAGACAGAGTGTTGCTGTaGATATCCAACTTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RSHDLSSISWRPRKACGIDRVLL*ISNFVR
Trigger: ACGCACAAAGTTGGATATGCACAGCAACACTCTGTC...TATACCACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAGATCATGGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCAACGTTGCTGAGCCCATaGATAACCTCTATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPTLLSP*ITSILV
Trigger: GACAAGAATAGAGGTTATGCATGGGCTCAGCAACGT...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTCATGCCCCATGTCACTaGATCCCTACCAATTTCACT +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAHAPCH*IPTNFT
Trigger: AGTGAAATTGGTAGGGATCCAGTGACATGGGGCATG...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTGATGACAGGTGTGGCTaGAGAAAGAGGCCTACTAGT +
Preference number: 4 (lower is better)
Translates to: GMAISFTESPSSNANLVCDDRCG*RKRPTS
Trigger: ACTAGTAGGCCTCTTTCTCCAGCCACACCTGTCATC...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCATATTTGGCACCCTGTaGCCTATTCAAGTTGACATA +
Preference number: 4 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLIFGTL*PIQVDI
Trigger: TATGTCAACTTGAATAGGCCACAGGGTGCCAAATAT...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCACATGTGTTGAGAAATaGAATCTTTCACAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EALQEPFSICLGLCLSPFTCVEK*NLSQWA
Trigger: TGCCCACTGTGAAAGATTCCATTTCTCAACACATGT...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCACTTTTGCTGTGAACTaGGTTTCTTGTAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICTFAVN*VSCNAV
Trigger: CACAGCATTACAAGAAACTCAGTTCACAGCAAAAGT...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCAGCCACGTGTGCACAATaGCCTAGGCAAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAATCAQ*PRQVRG
Trigger: GCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGC...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR GCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTGACAGAGTGTTGCTGTaGATATCCAACTTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFADRVLL*ISNFVR
Trigger: ACGCACAAAGTTGGATATGCACAGCAACACTCTGTC...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGAAATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACATTTGCCTAGGCTTGTaGCTGTCACCTTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RNGIFHSGHVHSGKPRVHICLGL*LSPFSF
Trigger: GAAAGAGAAAGGTGACAGGCACAAGCCTAGGCAAAT...GTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CCA 90 bp GCCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGCCACGGCCTATGAATTaGCATATAATTGAATATCTG +
Preference number: 4 (lower is better)
Translates to: ARSFKQHPYLPLPLKHHWPRPMN*HIIEYL
Trigger: CAGATATTCAATTATATGCCAATTCATAGGCCGTGG...CCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATAGCAGTGCATAAGTCATaGGAACAGGAAGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: QHPYLPLPLKHHWICWIIAVHKS*EQEAKI
Trigger: AATTTTTGCTTCCTGTTCCCATGACTTATGCACTGC...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp ATTCTTGTCACCATGGCTACTTTGCTCATGAAACAATaGGGTGATGACAGGTGTGGCTGGAGAAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILVTMATLLMKQ*GDDRCGWRKRP
Trigger: AGGCCTCTTTCTCCAGCCACACCTGTCATCACCCAATTGTTTCATGAGCAAAGTAGCCATGGTGACAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp GCTAATAGCGAATGGTGTCCTTCCTATTCTGACCCCTaGATTCCTGGACCTGTGAATCCCAGTCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: ANSEWCPSYSDP*IPGPVNPSHKR
Trigger: TCTCTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACACCATTCGCTATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTATAACATCCAGTTCATaGTGGGAAGCTCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GMAISFTESPSSNANLVCITSSS*WEAQVA
Trigger: TGCAACCTGAGCTTCCCATCATGAACTGGATGTTAT...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp AAGAAAGTGGCTTACATGATTATGGAGGCTAAGAGGTCCCATGATCTGTCATCTTCTTTCTCTGTCAGCTaGTCACAGGGAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KKVAYMIMEAKRSHDLSSSFSVS*SQGSPH
Trigger: ATGGGGACTTCCCTGTGATCAGCTGACAGAGAAAGA...AGATGACAGATCATGGGACCTCTTAGCCTCCATAATCATGTAAGCCACTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGCCAAACCTTCATTCCTaGAAGGTCTGGATCATTAGT +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKPNLHS*KVWIIS
Trigger: ACTAATGATCCAGACCTTTCAGGAATGAAGGTTTGG...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGCTGAATCCAAAGGCTTaGGAACCAGGGAAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKLNPKA*EPGKPV
Trigger: CACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAG...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGGTAGTTCCTACTTCTTaGTCACTAGGTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKVVPTS*SLGQIS
Trigger: GCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTAC...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGCATGTAACTTCCTTGTaGCTTCAGGGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKHVTSL*LQGLSG
Trigger: GCCTGAGAGGCCCTGAAGGCACAAGGAAGTTACATG...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AAGAAAGTGGCTTACATGATTATGGAGGCTAAGAGGTCCCATGATCTGTCATCTATGAAGGTGTGTTGCTaGCCCTGCCATCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KKVAYMIMEAKRSHDLSSMKVCC*PCHLKA
Trigger: TGCTTTCAGATGGCAGGGCCAGCAACACACCTTCAT...AGATGACAGATCATGGGACCTCTTAGCCTCCATAATCATGTAAGCCACTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTTCTTGTAATGCTGTGTaGAATACCATGGTCATAGAT +
Preference number: 4 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSSCNAV*NTMVID
Trigger: ATCTATGACCATGGTATTCCACACAGCATTACAAGA...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATATCTTGTAATGCTGTGTaGAATACCATGGTCATAGAT +
Preference number: 4 (lower is better)
Translates to: QHPYLPLPLKHHWICWIISCNAV*NTMVID
Trigger: ATCTATGACCATGGTATTCCACACAGCATTACAAGA...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCGCACTGCTATATAGCTaGTGTTATTACTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VHNDLGKSEALQEPFSICALLYS*CYYCLQ
Trigger: TTGAAGACAGTAATAACACCAGCTATATAGCAGTGC...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTATAAGAAGCCCCAAATaGCTGAGGAGCAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAIRSPK*LRSSLK
Trigger: TTTAAGACTGCTCCTCAGCCATTTGGGGCTTCTTAT...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp GGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGACACATGTGTTGAGAAATaGAATCTTTCACAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GIFHSGHVHSGKPRVHNDTCVEK*NLSQWA
Trigger: TGCCCACTGTGAAAGATTCCATTTCTCAACACATGT...GTCATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
3UTR CAA 72 bp CATCTGATGACAGAGTGTTGCTGTGCATATCCAACTTaGTGCGTTGGTGGCTCAGATAACATCCAGTTCATG +
Preference number: 4 (lower is better)
Translates to: HLMTECCCAYPT*CVGGSDNIQFM
Trigger: CATGAACTGGATGTTATCTGAGCCACCAACGCACAAAGTTGGATATGCACAGCAACACTCTGTCATCAGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp CCATGCATAACCTCTATTCTTGTCACCATGGCTACTTaGCTCATGAAACAATTGGGTGATGACAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PCITSILVTMAT*LMKQLGDDRCG
Trigger: GCCACACCTGTCATCACCCAATTGTTTCATGAGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCAATCTGCTGGATCATATaGCCCAAGTGGCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAICWII*PKWQSS
Trigger: GCTGCTCTGCCACTTGGGTCATATGATCCAGCAGAT...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTTGGAGGACATACTTATaGCAATCACAGTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAWRTYL*QSQSVF
Trigger: AAACACAGACTGTGATTGTCATAAGTATGTCCTCCA...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp AGAAATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACGAAATTGGAAAATGTTaGCTCCAAAACCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RNGIFHSGHVHSGKPRVHEIGKC*LQNPKR
Trigger: CCTCTTTGGGTTTTGGAGGCAACATTTTCCAATTTC...GTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCATATCATACAGAACACACTCTTTTCTTGTTCTaGGCCCTACTCAAAACTAGC +
Preference number: 4 (lower is better)
Translates to: CSAAAIHFRVVPAYHTEHTLFLF*ALLKTS
Trigger: GCTAGTTTTGAGTAGGGCCCAGAACAAGAAAAGAGT...GTGTTCTGTATGATATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AGAAATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACGCAGTGCATAAGTCATaGGAACAGGAAGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: RNGIFHSGHVHSGKPRVHAVHKS*EQEAKI
Trigger: AATTTTTGCTTCCTGTTCCCATGACTTATGCACTGC...GTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTAGCAAGCACTTCATCTaGTCATGGTACTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFSKHFI*SWYLPG
Trigger: ACCAGGTAAGTACCATGACCAGATGAAGTGCTTGCT...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp GAGCATTCACATGGGGCACAAATATCTTCACCCTTTTaGCCCATTCAGTGTCTATCCACATACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: EHSHGAQISSPF*PIQCLSTYFIS
Trigger: GGAGATGAAGTATGTGGATAGACACTGAATGGGCAAAAAGGGTGAAGATATTTGTGCCCCATGTGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp AAGGCCTGTGGTATAATTCAGTCTGAATCCAAAGGCTaGAGAACCAGGGAAGCCAGTGATGTAAATCCATCT +
Preference number: 4 (lower is better)
Translates to: KACGIIQSESKG*RTREASDVNPS
Trigger: AGATGGATTTACATCACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGACTGAATTATACCACAGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR TCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTTGGTATAATTCAGTCTaGATCCAAAGGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GMAISFTESPSSNANLVCWYNSV*IQRLEN
Trigger: GTTCTCAAGCCTTTGGATTCAGACTGAATTATACCA...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp TGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCATATCATACAGAACACTATCTTCACCCTTTTTaGCCATTCAGTGTCTATCCA +
Preference number: 4 (lower is better)
Translates to: CSAAAIHFRVVPAYHTEHYLHPF*PFSVYP
Trigger: TGGATAGACACTGAATGGGCAAAAAGGGTGAAGATA...GTGTTCTGTATGATATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TGTCCTTCCTATTCTGACCCCTTGATTCCTGGACCTGTGAATCCCAGTCATAAGCCACGGCCTATGAATTaGCATATAATTGAATATCTG +
Preference number: 4 (lower is better)
Translates to: CPSYSDPLIPGPVNPSHKPRPMN*HIIEYL
Trigger: CAGATATTCAATTATATGCCAATTCATAGGCCGTGG...CTTATGACTGGGATTCACAGGTCCAGGAATCAAGGGGTCAGAATAGGAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp TGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCATATCATACAGAACACAACTCATTTGTCTATTaGGTTAGAGGCATAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CSAAAIHFRVVPAYHTEHNSFVY*VRGIRS
Trigger: GCTTCTTATGCCTCTAACTCAATAGACAAATGAGTT...GTGTTCTGTATGATATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTTTACTGCACATGTGTTaGGAAATGGAATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GMAISFTESPSSNANLVCLLHMC*EMESFT
Trigger: TGTGAAAGATTCCATTTCTCAACACATGTGCAGTAA...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGATAAGAAGCCCCAAATaGCTGAGGAGCAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKIRSPK*LRSSLK
Trigger: TTTAAGACTGCTCCTCAGCCATTTGGGGCTTCTTAT...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCACCAAACCTTCATTCCTaGAAGGTCTGGATCATTAGT +
Preference number: 4 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAPNLHS*KVWIIS
Trigger: ACTAATGATCCAGACCTTTCAGGAATGAAGGTTTGG...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCAGGGACTACGGAAATTTaGCCTACTTCTTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAGTTEI*PTSSCN
Trigger: GTTACATGAAGAAGTAGGCCAAATTTCCGTAGTCCC...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp GCTAGTATTTATTCCACCATTTATTCTGTATTCCCTTaGCCTTCAGCAAGCACTTCATCTGGTCATGGTACT +
Preference number: 4 (lower is better)
Translates to: ASIYSTIYSVFP*PSASTSSGHGT
Trigger: AGTACCATGACCAGATGAAGTGCTTGCTGAAGGCAAAGGGAATACAGAATAAATGGTGGAATAAATACTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR TCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCATTATTTCCTACCCTCTaGTGCAAATGTCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWALFPTL*CKCLST
Trigger: AGTGGAAAGACATTTGCATCAGAGGGTAGGAAATAA...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR GCA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCATATCTTCACCCTTTTTaGCCATTCAGTGTCTATCCA +
Preference number: 4 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAYLHPF*PFSVYP
Trigger: TGGATAGACACTGAATGGGCAAAAAGGGTGAAGATA...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp AAGAAAGTGGCTTACATGATTATGGAGGCTAAGAGGTCCCATGATCTGTCATCTAAATGCACCATATACTaGATGTTGATTCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: KKVAYMIMEAKRSHDLSSKCTIY*MLIQSI
Trigger: TATGCTCTGAATCAACATCCAGTATATGGTGCATTT...AGATGACAGATCATGGGACCTCTTAGCCTCCATAATCATGTAAGCCACTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp CCAAGAGCTGTTTCTCAAAAAGAGACTAGTTATTTGTaGGTAATGGCACGGCTTTGCTCTAAAATCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PRAVSQKETSYL*VMARLCSKILN
Trigger: GTTTAGGATTTTAGAGCAAAGCCGTGCCATTACCAACAAATAACTAGTCTCTTTTTGAGAAACAGCTCTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
3UTR CAA 72 bp TCTTCAAAATGCCATTCCACTGCTCTATGTAGCCAGTaGATTCAAGATAGTAGGGAACATGGTAAGAAAATT +
Preference number: 4 (lower is better)
Translates to: SSKCHSTALCSQ*IQDSREHGKKI
Trigger: AATTTTCTTACCATGTTCCCTACTATCTTGAATCAACTGGCTACATAGAGCAGTGGAATGGCATTTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CCA 90 bp TCCACTAAGTCTAATGTAGTTCCTACTTCTTGCTCACTAGGTCAAATCAGCATAAAATGCACCATATACTaGATGTTGATTCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: STKSNVVPTSCSLGQISIKCTIY*MLIQSI
Trigger: TATGCTCTGAATCAACATCCAGTATATGGTGCATTT...TATGCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACATTAGACTTAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS CCA 90 bp GCGGGCTCGTACACGTCGCTGAAGGCGCCGCGGCCCACGTGCCCGTaGAACGGCGTAGCGAAGTTCTCCCCTGCCATAGTCCTTCGCTGC +
Preference number: 5 (lower is better)
Translates to: AGSYTSLKAPRPTCP*NGVAKFSPAIVLRC
Trigger: GCAGCGAAGGACTATGGCAGGGGAGAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS GCA 90 bp TCCTCCGCGGGCTCGTACACGTCGCTGAAGGCGCCGCGGCCCACGTaGCCGTGGAACGGCGTAGCGAAGTTCTCCCCTGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SSAGSYTSLKAPRPT*PWNGVAKFSPAIVL
Trigger: AAGGACTATGGCAGGGGAGAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGCCCGCGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGTGGCAGAGCAGCTaGCACAGCAGCCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: SADHREVPMKPPMQAGREKWQSS*HSSLDL
Trigger: CAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTT...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TCAGCTGATCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGCACTCAGAGATAGCCTaGGCCAGGTCAGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SADHREVPMKPPMQAGREHSEIA*ARSALV
Trigger: CACCAAGGCTGACCTGGCCAAGGCTATCTCTGAGTG...CTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGATCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TCACAGGGAAGTCCCCATGAAGCCACCGATGCAGGCTGGAAGAGAGAAGGCAGGTCTATTTGCCTAGGCTaGTGCCTGTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQGSPHEATDAGWKREGRSICLG*CLSPFS
Trigger: AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGA...CCTGCCTTCTCTCTTCCAGCCTGCATCGGTGGCTTCATGGGGACTTCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CATTCAGGCAAGCCACGTGTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGCAGGAAGCAAAAATTTaGCTAGTGGGTCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: HSGKPRVHNDLGKSEALQQEAKI*LVGHQG
Trigger: GCCCTGGTGACCCACTAGCAAAATTTTTGCTTCCTG...CTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCACACGTGGCTTGCCTGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCCAGGAAGCAAAAATTTaGCTAGTGGGTCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLQEAKI*LVGHQG
Trigger: GCCCTGGTGACCCACTAGCAAAATTTTTGCTTCCTG...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTCTGAATCCAAAGGCTaGAGAACCAGGGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLSESKG*RTREAS
Trigger: ACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGA...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCGGAACCCTTCTCTATTaGCCTAGGCTTGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VHNDLGKSEALQEPFSICGTLLY*PRLVPV
Trigger: GACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCC...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTAAGTGGCAGAGCAGCTaGCACAGCAGCCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFKWQSS*HSSLDL
Trigger: CAGGTCCAGGCTGCTGTGCAAGCTGCTCTGCCACTT...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GAGGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCGCCAGATCAATTCCATaGCCTTACCACATAATGCTG +
Preference number: 5 (lower is better)
Translates to: EALQEPFSICLGLCLSPFARSIP*PYHIML
Trigger: CAGCATTATGTGGTAAGGCAATGGAATTGATCTGGC...GAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGGTCCCATGATCTGTCATCTATAAGCTGGAGACCCAGGAAGGCCTGTGGTATAAGCAGCCTGGACCTGTaGCAGACTCTTTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RSHDLSSISWRPRKACGISSLDL*QTLFLF
Trigger: GAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCT...TATACCACAGGCCTTCCTGGGTCTCCAGCTTATAGATGACAGATCATGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCGAGACTAGTTATTTGTaGGTAATGGCACGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLETSYL*VMARLC
Trigger: GCAAAGCCGTGCCATTACCAACAAATAACTAGTCTC...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCTCTATTTGCCTAGGCTaGTGCCTGTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VHNDLGKSEALQEPFSICSICLG*CLSPFS
Trigger: AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGA...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATATTTACACCTCACAAATaGAATGCCAGGCCACCACAC +
Preference number: 5 (lower is better)
Translates to: QHPYLPLPLKHHWICWIIFTPHK*NARPPH
Trigger: GTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAAA...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TGTCATATCAGGGGCTCAGTGTTGGTCTCTGTTGCTGGCAGACTGGGCACTCAGTATTGTGCCTCTTTCTaGGTTTTAAGAGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: CHIRGSVLVSVAGRLGTQYCASF*VLRAAR
Trigger: TCTTGCTGCTCTTAAAACCAAGAAAGAGGCACAATA...CTGAGTGCCCAGTCTGCCAGCAACAGAGACCAACACTGAGCCCCTGATATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GCCAGAAGCTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGTCTGATGACAGAGTGTaGCTGTGCATATCCAACTTT +
Preference number: 5 (lower is better)
Translates to: ARSFKQHPYLPLPLKHHWSDDRV*LCISNF
Trigger: AAAGTTGGATATGCACAGCAACACTCTGTCATCAGA...CCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAGCTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCATATCTTCACCCTTTTaGCCCATTCAGTGTCTATCC +
Preference number: 5 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLISSPF*PIQCLS
Trigger: GGATAGACACTGAATGGGCAAAAAGGGTGAAGATAT...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GTGCACAATGACCTAGGCAAGTCAGAGGCTCTCCAGGAACCCTTCTCTATTTGCGGCTGTAGTTTTCCATaGACCTTAATCACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: VHNDLGKSEALQEPFSICGCSFP*TLITGH
Trigger: ATGCCCTGTGATTAAGGTCAATGGAAAACTACAGCC...GCAAATAGAGAAGGGTTCCTGGAGAGCCTCTGACTTGCCTAGGTCATTGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GGCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTGTTTAAACAGATATTaGGCACCCTGTGGCCTATTC +
Preference number: 5 (lower is better)
Translates to: GSPGTLLYLPRLVPVTFLCLNRY*APCGLF
Trigger: GAATAGGCCACAGGGTGCCAAATATCTGTTTAAACA...GAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTTCTGAATCCAAAGGCTaGAGAACCAGGGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFASESKG*RTREAS
Trigger: ACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGA...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGAAATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACTCTGAATCCAAAGGCTaGAGAACCAGGGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: RNGIFHSGHVHSGKPRVHSESKG*RTREAS
Trigger: ACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGA...GTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp CAGTCTGAATCCAAAGGCTTGAGAACCAGGGAAGCCAGTGATGTAAATCCATCTGGAACCCTTCTCTATTaGCCTAGGCTTGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QSESKGLRTREASDVNPSGTLLY*PRLVPV
Trigger: GACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCC...AGATGGATTTACATCACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGTGTAGTTCCTACTTCTaGCTCACTAGGTCAAATCAG +
Preference number: 5 (lower is better)
Translates to: LQTASLSATATETPLDLLCSSYF*LTRSNQ
Trigger: CTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACA...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGTCTGATGACAGAGTGTaGCTGTGCATATCCAACTTT +
Preference number: 5 (lower is better)
Translates to: LQTASLSATATETPLDLLSDDRV*LCISNF
Trigger: AAAGTTGGATATGCACAGCAACACTCTGTCATCAGA...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGATCATACTTGGTAGCAAGCCTTaGACCAAATCTGTAATAACT +
Preference number: 5 (lower is better)
Translates to: QHPYLPLPLKHHWICWIILGSKP*TKSVIT
Trigger: AGTTATTACAGATTTGGTCAAAGGCTTGCTACCAAG...TATGATCCAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303775.10
CDS-3UTR CAA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTAGCAGCCTGGACCTGTaGCAGACTCTTTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFSSLDL*QTLFLF
Trigger: GAACAAGAAAAGAGTCTGCAACAGGTCCAGGCTGCT...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GCTCTCCAGGAACCCTTCTCTATTTGCCTAGGCTTGTGCCTGTCACCTTTCTCTCTTACTGCACATGTGTaGAGAAATGGAATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: ALQEPFSICLGLCLSPFSLTAHV*RNGIFH
Trigger: GTGAAAGATTCCATTTCTCAACACATGTGCAGTAAG...AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGAGAAGGGTTCCTGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCACTTGGTAGCAAGCCTTaGACCAAATCTGTAATAACT +
Preference number: 5 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPLGSKP*TKSVIT
Trigger: AGTTATTACAGATTTGGTCAAAGGCTTGCTACCAAG...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000460212.1
CDS-3UTR CAA 90 bp GGGATGGCTATCTCCTTTACTGAGTCCCCCAGTTCAAATGCAAATCTTGTCTGTTTGCAGACTCTTTTCTaGTTCTGGGCCCTACTCAAA +
Preference number: 5 (lower is better)
Translates to: GMAISFTESPSSNANLVCLQTLF*FWALLK
Trigger: TTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAA...ACAGACAAGATTTGCATTTGAACTGGGGGACTCAGTAAAGGAGATAGCCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCAAATTTTCCAGTTATATaGAACTCCCTGACCATCCAG +
Preference number: 5 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPNFPVI*NSLTIQ
Trigger: CTGGATGGTCAGGGAGTTCAATATAACTGGAAAATT...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTTTTACCCTTGTCAACTaGGCACCCATAAACATCTCT +
Preference number: 5 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFAFTLVN*APINIS
Trigger: AGAGATGTTTATGGGTGCCAAGTTGACAAGGGTAAA...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp ATGGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGTGTTTAAACAGATATTaGGCACCCTGTGGCCTATTC +
Preference number: 5 (lower is better)
Translates to: MESFTVGMFIQASHVCTMCLNRY*APCGLF
Trigger: GAATAGGCCACAGGGTGCCAAATATCTGTTTAAACA...CATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CTTCAAACAGCATCCCTATCTGCCACTGCCACTGAAACACCACTGGATCTGCTGGTTCAAATGCAAATCTaGTCTGTAAACACACTCAAG +
Preference number: 5 (lower is better)
Translates to: LQTASLSATATETPLDLLVQMQI*SVNTLK
Trigger: CTTGAGTGTGTTTACAGACAAGATTTGCATTTGAAC...CAGCAGATCCAGTGGTGTTTCAGTGGCAGTGGCAGATAGGGATGCTGTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGAGGGGTCCTTCATGCAGGTTTTACACCTCACAAATTGAATGCCAGGCCACCACTTACTGCACATGTGTaGAGAAATGGAATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: RGVLHAGFTPHKLNARPPLTAHV*RNGIFH
Trigger: GTGAAAGATTCCATTTCTCAACACATGTGCAGTAAG...TGGTGGCCTGGCATTCAATTTGTGAGGTGTAAAACCTGCATGAAGGACCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTTTTACACCTCACAAATaGAATGCCAGGCCACCACAC +
Preference number: 5 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFFTPHK*NARPPH
Trigger: GTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAAA...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp GGAATCTTTCACAGTGGGCATGTTCATTCAGGCAAGCCACGTGTGCACAATGACAAAACTAGCAGCTTTTaGAGTCAATTGGTAAACAGG +
Preference number: 5 (lower is better)
Translates to: GIFHSGHVHSGKPRVHNDKTSSF*SQLVNR
Trigger: CCTGTTTACCAATTGACTCAAAAAGCTGCTAGTTTT...GTCATTGTGCACACGTGGCTTGCCTGAATGAACATGCCCACTGTGAAAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CACGTTGCTGAGCCCATGCATAACCTCTATTCTTGTCACCATGGCTACTTTGCTAATTTTCCAGTTATATaGAACTCCCTGACCATCCAG +
Preference number: 5 (lower is better)
Translates to: HVAEPMHNLYSCHHGYFANFPVI*NSLTIQ
Trigger: CTGGATGGTCAGGGAGTTCAATATAACTGGAAAATT...AGCAAAGTAGCCATGGTGACAAGAATAGAGGTTATGCATGGGCTCAGCAACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TCCTGTGTATTCCCAACATACTTTACCTTACCACCATTCGGGGTAGTCCAGTTTGGCTGTAGTTTTCCATaGACCTTAATCACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: SCVFPTYFTLPPFGVVQFGCSFP*TLITGH
Trigger: ATGCCCTGTGATTAAGGTCAATGGAAAACTACAGCC...AAACTGGACTACCCCGAATGGTGGTAAGGTAAAGTATGTTGGGAATACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp CAGTCTGAATCCAAAGGCTTGAGAACCAGGGAAGCCAGTGATGTAAATCCATCTTTTACCCTTGTCAACTaGGCACCCATAAACATCTCT +
Preference number: 5 (lower is better)
Translates to: QSESKGLRTREASDVNPSFTLVN*APINIS
Trigger: AGAGATGTTTATGGGTGCCAAGTTGACAAGGGTAAA...AGATGGATTTACATCACTGGCTTCCCTGGTTCTCAAGCCTTTGGATTCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AAGAAAGTGGCTTACATGATTATGGAGGCTAAGAGGTCCCATGATCTGTCATCTGCCAGATCAATTCCATaGCCTTACCACATAATGCTG +
Preference number: 5 (lower is better)
Translates to: KKVAYMIMEAKRSHDLSSARSIP*PYHIML
Trigger: CAGCATTATGTGGTAAGGCAATGGAATTGATCTGGC...AGATGACAGATCATGGGACCTCTTAGCCTCCATAATCATGTAAGCCACTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TGTAGTGCTGCAGCTATCCACTTTAGGGTGGTACCTGCATATCATACAGAACACTATTGTGCCTCTTTCTaGGTTTTAAGAGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: CSAAAIHFRVVPAYHTEHYCASF*VLRAAR
Trigger: TCTTGCTGCTCTTAAAACCAAGAAAGAGGCACAATA...GTGTTCTGTATGATATGCAGGTACCACCCTAAAGTGGATAGCTGCAGCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGTCTATTTGCCTAGGCTaGTGCCTGTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKSICLG*CLSPFS
Trigger: AGAGAAAGGTGACAGGCACAAGCCTAGGCAAATAGA...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGTTGCAGACTCTTTTCTaGTTCTGGGCCCTACTCAAA +
Preference number: 5 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKLQTLF*FWALLK
Trigger: TTTGAGTAGGGCCCAGAACAAGAAAAGAGTCTGCAA...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AAGAAAGTGGCTTACATGATTATGGAGGCTAAGAGGTCCCATGATCTGTCATCTATATCTTCACCCTTTTaGCCCATTCAGTGTCTATCC +
Preference number: 5 (lower is better)
Translates to: KKVAYMIMEAKRSHDLSSISSPF*PIQCLS
Trigger: GGATAGACACTGAATGGGCAAAAAGGGTGAAGATAT...AGATGACAGATCATGGGACCTCTTAGCCTCCATAATCATGTAAGCCACTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp ATTTATTTCCCTTACTGCACATGTGTTGAGAAATGGAATCTTTCACAGTGGGCATTTACACCTCACAAATaGAATGCCAGGCCACCACAC +
Preference number: 5 (lower is better)
Translates to: IYFPYCTCVEKWNLSQWAFTPHK*NARPPH
Trigger: GTGTGGTGGCCTGGCATTCAATTTGTGAGGTGTAAA...TGCCCACTGTGAAAGATTCCATTTCTCAACACATGTGCAGTAAGGGAAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS-3UTR CAA 90 bp TCCACTAAGTCTAATGTAGTTCCTACTTCTTGCTCACTAGGTCAAATCAGCATAGAGACTAGTTATTTGTaGGTAATGGCACGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: STKSNVVPTSCSLGQISIETSYL*VMARLC
Trigger: GCAAAGCCGTGCCATTACCAACAAATAACTAGTCTC...TATGCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACATTAGACTTAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp AGTTTTCCATTGACCTTAATCACAGGGCATGATAACACTAAGAGATGCCCTAAGGCTCTATGTAGCCAGTaGATTCAAGATAGTAGGGAA +
Preference number: 5 (lower is better)
Translates to: SFPLTLITGHDNTKRCPKALCSQ*IQDSRE
Trigger: TTCCCTACTATCTTGAATCAACTGGCTACATAGAGC...CTTAGGGCATCTCTTAGTGTTATCATGCCCTGTGATTAAGGTCAATGGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TCCACTAAGTCTAATGTAGTTCCTACTTCTTGCTCACTAGGTCAAATCAGCATAGCTCTATGTAGCCAGTaGATTCAAGATAGTAGGGAA +
Preference number: 5 (lower is better)
Translates to: STKSNVVPTSCSLGQISIALCSQ*IQDSRE
Trigger: TTCCCTACTATCTTGAATCAACTGGCTACATAGAGC...TATGCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACATTAGACTTAGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TCCACTAAGTCTAATGTAGTTCCTACTTCTTGCTCACTAGGTCAAATCAGCATAAAAACTAGCAGCTTTTaGAGTCAATTGGTAAACAGG +
Preference number: 5 (lower is better)
Translates to: STKSNVVPTSCSLGQISIKTSSF*SQLVNR
Trigger: CCTGTTTACCAATTGACTCAAAAAGCTGCTAGTTTT...TATGCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACATTAGACTTAGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS-3UTR CAA 90 bp TCCACTAAGTCTAATGTAGTTCCTACTTCTTGCTCACTAGGTCAAATCAGCATAGTTCAAATGCAAATCTaGTCTGTAAACACACTCAAG +
Preference number: 5 (lower is better)
Translates to: STKSNVVPTSCSLGQISIVQMQI*SVNTLK
Trigger: CTTGAGTGTGTTTACAGACAAGATTTGCATTTGAAC...TATGCTGATTTGACCTAGTGAGCAAGAAGTAGGAACTACATTAGACTTAGTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303775.10
ENST00000351429.7
CDS GCA 72 bp GGCTCGTACACGTCGCTGAAGGCGCCGCGGCCCACGTaGCCGTGGAACGGCGTAGCGAAGTTCTCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: GSYTSLKAPRPT*PWNGVAKFSPA
Trigger: GGCAGGGGAGAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTACGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1
CDS CCA 72 bp TACACGTCGCTGAAGGCGCCGCGGCCCACGTGCCCGTaGAACGGCGTAGCGAAGTTCTCCCCTGCCATAGTC +
Preference number: 6 (lower is better)
Translates to: YTSLKAPRPTCP*NGVAKFSPAIV
Trigger: GACTATGGCAGGGGAGAACTTCGCTACGCCGTTCCACGGGCACGTGGGCCGCGGCGCCTTCAGCGACGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303775.10
ENST00000351429.7
ENST00000460212.1