RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for N4BP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078177

Ensembl transcript IDs: ENST00000261435.11, ENST00000511480.5, ENST00000513269.1, ENST00000515550.1

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAGGAGCAAGTACCGGGCAGTAACTCACATCCTTCCCCTTAGTTaGCAGTTCAGGATGTTTGTGTGGCTTGAAGTTGAACCCTTCGGA +
Preference number: 1 (lower is better)
Translates to: ERSKYRAVTHILPLS*QFRMFVWLEVEPFG
Trigger: TCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTACTTGCTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp TACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTaGATTCCACATCGGTGGAGGTGGCGGAGGAGGCAACAGCAATGG +
Preference number: 1 (lower is better)
Translates to: YKAMVSLEEVKSRNH*IPHRWRWRRRQQQW
Trigger: CCATTGCTGTTGCCTCCTCCGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp TTCAGAGAACCTGAAGCTATGGCTTATGAGGTACTTAATGACAGCTaGTTTGATGCGAGCAACTCCTCCCTGGCTGTGGTTTCCTCTCCC +
Preference number: 1 (lower is better)
Translates to: FREPEAMAYEVLNDS*FDASNSSLAVVSSP
Trigger: GGGAGAGGAAACCACAGCCAGGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTACCTCATAAGCCATAGCTTCAGGTTCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp TGTGCAGCTGTGGTTACAACAGGAGCTACAAAGCCATGGTTTCCTTaGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGA +
Preference number: 1 (lower is better)
Translates to: CAAVVTTGATKPWFP*KRSKAGIIGFHIGG
Trigger: TCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCCTGTTGTAACCACAGCTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp GATCTCCAGTGTGCAGCTGTGGTTACAACAGGAGCTACAAAGCCATaGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCAC +
Preference number: 1 (lower is better)
Translates to: DLQCAAVVTTGATKP*FPWKRSKAGIIGFH
Trigger: GTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCCTGTTGTAACCACAGCTGCACACTGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp GTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTaGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCC +
Preference number: 1 (lower is better)
Translates to: VQGVMPIPDSLWSEI*PSLEWDSISRFYLP
Trigger: GGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 90 bp AACCCTTCGGAAGGTAGAAACACATCAGAGACCCGAGTAGATTTCTaGTCCCCACCTGTACCTGGTAAATCAAGCCCTGGAAGGTTTAAA +
Preference number: 1 (lower is better)
Translates to: NPSEGRNTSETRVDF*SPPVPGKSSPGRFK
Trigger: TTTAAACCTTCCAGGGCTTGATTTACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGTCTCTGATGTGTTTCTACCTTCCGAAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 90 bp CAGCACTGGGAAATATACTTGTCATCGATTCATGGTTTTCAGGAGTaGCAGCTCTCATTTCCGCCTGCTCTGAGTTTCCTCTTTCTGCAT +
Preference number: 1 (lower is better)
Translates to: QHWEIYLSSIHGFQE*QLSFPPALSFLFLH
Trigger: ATGCAGAAAGAGGAAACTCAGAGCAGGCGGAAATGAGAGCTGTCACTCCTGAAAACCATGAATCGATGACAAGTATATTTCCCAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp TTTAGACCCACAGCAGCACTGGGAAATATACTTGTCATCGATTCATaGTTTTCAGGAGTGACAGCTCTCATTTCCGCCTGCTCTGAGTTT +
Preference number: 1 (lower is better)
Translates to: FRPTAALGNILVIDS*FSGVTALISACSEF
Trigger: AAACTCAGAGCAGGCGGAAATGAGAGCTGTCACTCCTGAAAACCATGAATCGATGACAAGTATATTTCCCAGTGCTGCTGTGGGTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 90 bp GGCTCACTTAAACCAGTCTTTGGCATTCTTGATCTGTGTTCCCTCTaGGCTAAAGAATCAGATGAAGGCCAGTCACCCATAATGTTGAAT +
Preference number: 1 (lower is better)
Translates to: GSLKPVFGILDLCSL*AKESDEGQSPIMLN
Trigger: ATTCAACATTATGGGTGACTGGCCTTCATCTGATTCTTTAGCTCAGAGGGAACACAGATCAAGAATGCCAAAGACTGGTTTAAGTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 90 bp CACATGCCTACTTCTTTTCCAGGGTCTCTCTTAGGCATTTGCTCTTaGCATTCAGCTAACGTTTGTGGTTCTACTACTCCAGAAACAGTT +
Preference number: 1 (lower is better)
Translates to: HMPTSFPGSLLGICS*HSANVCGSTTPETV
Trigger: AACTGTTTCTGGAGTAGTAGAACCACAAACGTTAGCTGAATGTCAAGAGCAAATGCCTAAGAGAGACCCTGGAAAAGAAGTAGGCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 90 bp TGCTACAACCTGCGATGGAGTCACTTGCTACATTTAAAGAACTACTaGGAAGAGAATCTTCCGGGTAGTTACTTTCCAAAGCCAATGTGT +
Preference number: 1 (lower is better)
Translates to: CYNLRWSHLLHLKNY*EENLPGSYFPKPMC
Trigger: ACACATTGGCTTTGGAAAGTAACTACCCGGAAGATTCTCTTCTCAGTAGTTCTTTAAATGTAGCAAGTGACTCCATCGCAGGTTGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp GCATCACAAGTAGACTGTGAGTCAGCGTTACTAATACCAATCCCATaGCTAAACTCTGGCACAGGAGAATTAGAATTCTCTAAAGTTCCT +
Preference number: 1 (lower is better)
Translates to: ASQVDCESALLIPIP*LNSGTGELEFSKVP
Trigger: AGGAACTTTAGAGAATTCTAATTCTCCTGTGCCAGAGTTTAGCCATGGGATTGGTATTAGTAACGCTGACTCACAGTCTACTTGTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR GCA 90 bp TGTGACTTTCTGCCATCCTCTACACTTTCATGTGGAGATCCTCGTTaGTGGACACAATCTGTATTCACAGATACACTGTTAACTAATTTG +
Preference number: 1 (lower is better)
Translates to: CDFLPSSTLSCGDPR*WTQSVFTDTLLTNL
Trigger: CAAATTAGTTAACAGTGTATCTGTGAATACAGATTGTGTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAGGATGGCAGAAAGTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 90 bp GTTACGCCTTGCAAGTTCCTTTGGTTTAAACTTCCACCATGTGTCTaGTTCCCGAAAAAGGACTTTATATTTGTGTTTCTGAGACAAAGC +
Preference number: 1 (lower is better)
Translates to: VTPCKFLWFKLPPCV*FPKKDFIFVFLRQS
Trigger: GCTTTGTCTCAGAAACACAAATATAAAGTCCTTTTTCGGGAACCAGACACATGGTGGAAGTTTAAACCAAAGGAACTTGCAAGGCGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR GCA 90 bp CTCATATCTTTAGGAGTAGTAGCTTTTAGAATACCTGGAAAGGACTaGTTACTGCTATATAAAAGTTCTTCCTGGCTGTTAGGAAGTATG +
Preference number: 1 (lower is better)
Translates to: LISLGVVAFRIPGKD*LLLYKSSSWLLGSM
Trigger: CATACTTCCTAACAGCCAGGAAGAACTTTTATATAGCAGTAAGCAGTCCTTTCCAGGTATTCTAAAAGCTACTACTCCTAAAGATATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATaGGATTCCACATCGGTGGAGGTGGCGGAGGAGGCAACAGCAATG +
Preference number: 2 (lower is better)
Translates to: LQSHGFLGRGQKQES*DSTSVEVAEEATAM
Trigger: CATTGCTGTTGCCTCCTCCGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp GAGAACCTGAAGCTATGGCTTATGAGGTACTTAATGACAGCTGGTTaGATGCGAGCAACTCCTCCCTGGCTGTGGTTTCCTCTCCCCGTA +
Preference number: 2 (lower is better)
Translates to: ENLKLWLMRYLMTAG*MRATPPWLWFPLPV
Trigger: TACGGGGAGAGGAAACCACAGCCAGGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTACCTCATAAGCCATAGCTTCAGGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTCGATCTCGGGTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHSISGH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGACCCGAGATCGA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCACAACTGGACACCCTCTaGGGTTTCCACATTAGTCCT +
Preference number: 2 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPQLDTL*GFHISP
Trigger: AGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTG...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTCCTGTGGTTCAGTCTaGGTGCACATGCCTACTTCT +
Preference number: 2 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFSCGSV*VHMPTS
Trigger: AGAAGTAGGCATGTGCACCCAGACTGAACCACAGGA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp CTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTaGAAGTTGAACCCTTCGGAAGGTAGAAACACATCAGAGACCCGA +
Preference number: 2 (lower is better)
Translates to: LTSFPLVGSSGCLCG*KLNPSEGRNTSETR
Trigger: TCGGGTCTCTGATGTGTTTCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp GTGTGCAGCTGTGGTTACAACAGGAGCTACAAAGCCATGGTTTCCTaGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGG +
Preference number: 2 (lower is better)
Translates to: VCSCGYNRSYKAMVS*EEVKSRNHWIPHRW
Trigger: CCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCCTGTTGTAACCACAGCTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp CCGATAAGCTTCTTTGGCCTTGCTGTAGCACTCCATCCTCTTCTGTaGGTGAAGGAAAGCCTCTGCTCTGTAGTCATCATAGTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: PISFFGLAVALHPLL*VKESLCSVVIIVWV
Trigger: TACCCAGACTATGATGACTACAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAGTGCTACAGCAAGGCCAAAGAAGCTTATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp TCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTGAAGTaGAACCCTTCGGAAGGTAGAAACACATCAGAGACCCGAGTAGAT +
Preference number: 2 (lower is better)
Translates to: SFPLVGSSGCLCGLK*NPSEGRNTSETRVD
Trigger: ATCTACTCGGGTCTCTGATGTGTTTCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTGTGAGTATTTCCTTTaGGCATCATGTCTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFCEYFL*ASCLCS
Trigger: CGAGCACAGACATGATGCTCAAAGGAAATACTCACA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR TCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACCCGAGTAGATTTCTaGTCCCCACCTGTACCTGGT +
Preference number: 2 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSTRVDF*SPPVPG
Trigger: ACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGT...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATCTTTGCTTACCCCATaGATGTTACGCCTTGCAAGT +
Preference number: 2 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPSLLTP*MLRLAS
Trigger: ACTTGCAAGGCGTAACATTCATGGGGTAAGCAAAGA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTCGATCTCGGGTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYSISGH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGACCCGAGATCGA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR GCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTGTTTTTGAGAGCTTGTaGCCCAACAGGCCTCATGTG +
Preference number: 2 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTVFESL*PNRPHV
Trigger: CACATGAGGCCTGTTGGGGCACAAGCTCTCAAAAAC...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp AGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTaGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCC +
Preference number: 2 (lower is better)
Translates to: SSGGNANSRQSMVRD*AIAGVGFNISVLSS
Trigger: GGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTTTTCATTTGACTTCTaGCCACGGAATACCACACCT +
Preference number: 2 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFFSFDF*PRNTTP
Trigger: AGGTGTGGTATTCCGTGGGCAGAAGTCAAATGAAAA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATTCAGGATGTTTGTGTaGCTTGAAGTTGAACCCTTC +
Preference number: 2 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPFRMFV*LEVEPF
Trigger: GAAGGGTTCAACTTCAAGCCACACAAACATCCTGAA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTCACAGGTCATTTCACTaGGCAGCATTTCAGAACTTC +
Preference number: 2 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTHRSFH*AAFQNF
Trigger: GAAGTTCTGAAATGCTGCTCAGTGAAATGACCTGTG...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTGGCCAGGCTGGTCTTaGACTTCTGACCTCAGGCGA +
Preference number: 2 (lower is better)
Translates to: SPSPKANLSHCLILENYTWPGWS*TSDLRR
Trigger: TCGCCTGAGGTCAGAAGTTCAAGACCAGCCTGGCCA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR TCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGAGGATTTTTCATTTTaGAGTGGTCCACTATTTGCA +
Preference number: 2 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFEDFSF*SGPLFA
Trigger: TGCAAATAGTGGACCACTTCAAAATGAAAAATCCTC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATATCCCGGAAGACCTCTaGGAAGAACAAGAACTAGTC +
Preference number: 2 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYIPEDL*EEQELV
Trigger: GACTAGTTCTTGTTCTTCTCAGAGGTCTTCCGGGAT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGTCACCCAGGCTGAGTaGAGTGGTGTGATCTCGATC +
Preference number: 2 (lower is better)
Translates to: SPSPKANLSHCLILENYTVTQAE*SGVISI
Trigger: GATCGAGATCACACCACTGCACTCAGCCTGGGTGAC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR GCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGGTCACCCAGGCTGAGTaGAGTGGTGTGATCTCGATC +
Preference number: 2 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWVTQAE*SGVISI
Trigger: GATCGAGATCACACCACTGCACTCAGCCTGGGTGAC...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGGAGCTACAAAGCCATaGTTTCCTTGGAAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYGATKP*FPWKRS
Trigger: TGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATATAAAAGTTCTTCCTaGCTGTTAGGAAGTATGTCA +
Preference number: 2 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPYKSSS*LLGSMS
Trigger: TGACATACTTCCTAACAGCCAGGAAGAACTTTTATA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp TTTCTCTTTAGACTTCTGGCCAGTATGAGATGTGACATTCTCATTTaGGTGAACAAACTCTTGGGCTACAACTGTTTTTACAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: FLFRLLASMRCDILI*VNKLLGYNCFYRVP
Trigger: GGGGACCCTGTAAAAACAGTTGTAGCCCAAGAGTTTGTTCACCAAAATGAGAATGTCACATCTCATACTGGCCAGAAGTCTAAAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCTGGTCTTGAACTTCTaGCCTCAGGCGATCCACCTA +
Preference number: 2 (lower is better)
Translates to: SPSPKANLSHCLILENYTLVLNF*PQAIHL
Trigger: TAGGTGGATCGCCTGAGGTCAGAAGTTCAAGACCAG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR GCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTCTGTTGCCTGTAGTTTaGTTTCAGAGTCAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTLLPVV*FQSQKN
Trigger: ATTTTTCTGACTCTGAAAGCAAACTACAGGCAACAG...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTAAGCCTGAGGTTCACTaGCATCCAAATCTACAGGAG +
Preference number: 2 (lower is better)
Translates to: SIELSVSVLLYPFTATISKPEVH*HPNLQE
Trigger: CTCCTGTAGATTTGGATGCCAGTGAACCTCAGGCTT...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTCCATCACACGATTTTTaGAAATTCTCAAACTCTGTA +
Preference number: 2 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTPSHDF*KFSNSV
Trigger: TACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGG...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCAAAAATGAGTATACTTaGTCATCAGGAGAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSKNEYT*SSGEEF
Trigger: GAACTCTTCTCCTGATGACCAAGTATACTCATTTTT...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGAGGTTTAAACAAGCCTaGGGTTCACTGGCATCCAAA +
Preference number: 2 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWRFKQA*GSLASK
Trigger: TTTGGATGCCAGTGAACCTCAGGCTTGTTTAAACCT...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTCTGCTGCACCTACTTaGTTCTCAGAAGCAACGAAA +
Preference number: 2 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWSAAPT*FSEATK
Trigger: TTTCGTTGCTTCTGAGAACCAAGTAGGTGCAGCAGA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTTGCTACAACCTGCGATaGAGTCACTTGCTACATTTA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFCYNLR*SHLLHL
Trigger: TAAATGTAGCAAGTGACTCCATCGCAGGTTGTAGCA...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCTTTCTGTTTTTGATTaGGACTGCTACAACCTGCGA +
Preference number: 2 (lower is better)
Translates to: SPSPKANLSHCLILENYTLSVFD*DCYNLR
Trigger: TCGCAGGTTGTAGCAGTCTCAATCAAAAACAGAAAG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAGGTCTTCAGTTAGCTaGATGTCCAAAAATGAATCC +
Preference number: 2 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIRSSVS*MSKNES
Trigger: GGATTCATTTTTGGACATGCAGCTAACTGAAGACCT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTCTCAAATGCTTCTTTTaGACGATTCTGGTTCCATTC +
Preference number: 2 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFLKCFF*TILVPF
Trigger: GAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAG...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTATCTTCTTCTCAAATaGTTCTTTTGCACGATTCTG +
Preference number: 2 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYYLLLK*FFCTIL
Trigger: CAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATACTTTAGGATTCTTTTaGTACCAGCTCAATCCTATA +
Preference number: 2 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYTLGFF*YQLNPI
Trigger: TATAGGATTGAGCTGGTACCAAAAGAATCCTAAAGT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR CCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTCCTTGCAAGTTCCTTTaGTTTAAACTTCCACCATGT +
Preference number: 2 (lower is better)
Translates to: SIELSVSVLLYPFTATISPCKFL*FKLPPC
Trigger: ACATGGTGGAAGTTTAAACCAAAGGAACTTGCAAGG...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 90 bp CAAAGAATCATTCTAATGAGTCATGTATTAGCACAAATATACAGGTaGAGTGAGTATCCCCTACTCAAAATGCTTAGGACCAGAAGTGTT +
Preference number: 2 (lower is better)
Translates to: QRIILMSHVLAQIYR*SEYPLLKMLRTRSV
Trigger: AACACTTCTGGTCCTAAGCATTTTGAGTAGGGGATACTCACTCAACCTGTATATTTGTGCTAATACATGACTCATTAGAATGATTCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR CAA 90 bp TCTGCATTAGAGAGATATGCAACATTCTCAGGTAACATTGTTTCTTaGGTTACATCAAGATTCTTCTCTTCAGTGAACTCTAGATGCTTC +
Preference number: 2 (lower is better)
Translates to: SALERYATFSGNIVS*VTSRFFSSVNSRCF
Trigger: GAAGCATCTAGAGTTCACTGAAGAGAAGAATCTTGATGTAACCAAAGAAACAATGTTACCTGAGAATGTTGCATATCTCTCTAATGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGAATGACAGCTTCCTTTaGGAAAGTTGGCTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWNDSFL*ESWLFF
Trigger: GAAAAAGAGCCAACTTTCTCAAAGGAAGCTGTCATT...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR TCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTAGTTCTTTCTGTTTTTaGTTGAGACTGCTACAACCT +
Preference number: 2 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFSSFCF*LRLLQP
Trigger: AGGTTGTAGCAGTCTCAATCAAAAACAGAAAGAACT...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTTACAACCTGAGAAACTaGGGTTTCTTGTACTTGATA +
Preference number: 2 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFYNLRN*GFLYLI
Trigger: TATCAAGTACAAGAAACCCCAGTTTCTCAGGTTGTA...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTAAGAATGACTCCACTTaGATTATCCTCTTGCAAAGT +
Preference number: 2 (lower is better)
Translates to: SIELSVSVLLYPFTATISKNDST*IILLQS
Trigger: ACTTTGCAAGAGGATAATCCAAGTGGAGTCATTCTT...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTACGTTCAATTTTCTCTaGAACCGAAGAACTCATAAT +
Preference number: 2 (lower is better)
Translates to: SIELSVSVLLYPFTATISTFNFL*NRRTHN
Trigger: ATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGT...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp GAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTaGAGGTGGCGGAGGAGGCAACAGCAATGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: EVKSRNHWIPHR*RWRRRQQQWER
Trigger: CCTCTCCCATTGCTGTTGCCTCCTCCGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp CCTGAAGCTATGGCTTATGAGGTACTTAATGACAGCTaGTTTGATGCGAGCAACTCCTCCCTGGCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: PEAMAYEVLNDS*FDASNSSLAVV
Trigger: AACCACAGCCAGGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTACCTCATAAGCCATAGCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGGATGTTTGTGTGGCTaGAAGTTGAACCCTTCGGAA +
Preference number: 3 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFGCLCG*KLNPSE
Trigger: TTCCGAAGGGTTCAACTTCAAGCCACACAAACATCC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATTAGTTTTTGAGAGCTaGTGCCCCAACAGGCCTCAT +
Preference number: 3 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPLVFES*CPNRPH
Trigger: ATGAGGCCTGTTGGGGCACAAGCTCTCAAAAACTAA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 72 bp GAAGGTAGAAACACATCAGAGACCCGAGTAGATTTCTaGTCCCCACCTGTACCTGGTAAATCAAGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: EGRNTSETRVDF*SPPVPGKSSPG
Trigger: TCCAGGGCTTGATTTACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGTCTCTGATGTGTTTCTACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR GCA 72 bp GCACTCCATCCTCTTCTGTTGGTGAAGGAAAGCCTCTaGTCTGTAGTCATCATAGTCTGGGTACTCAAAGTC +
Preference number: 3 (lower is better)
Translates to: ALHPLLLVKESL*SVVIIVWVLKV
Trigger: GACTTTGAGTACCCAGACTATGATGACTACAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp CAAGCCCTGGAAGGTTTAAACAAGCCTGAGGTTCACTaGCATCCAAATCTACAGGAGCTTCAGAGAATTGAG +
Preference number: 3 (lower is better)
Translates to: QALEGLNKPEVH*HPNLQELQRIE
Trigger: CTCAATTCTCTGAAGCTCCTGTAGATTTGGATGCCAGTGAACCTCAGGCTTGTTTAAACCTTCCAGGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp AAGTACCGGGCAGTAACTCACATCCTTCCCCTTAGTTaGCAGTTCAGGATGTTTGTGTGGCTTGAAGTTGAA +
Preference number: 3 (lower is better)
Translates to: KYRAVTHILPLS*QFRMFVWLEVE
Trigger: TTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp TTCCAGACAGTCTATGGTCAGAGATTTGGCCATCGCTaGAGTGGGATTCAATATCTCGGTTTTATCTTCCCC +
Preference number: 3 (lower is better)
Translates to: FQTVYGQRFGHR*SGIQYLGFIFP
Trigger: GGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAAATCTCTGACCATAGACTGTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGCAAAAGCAGGAATCATaGGATTCCACATCGGTGGAG +
Preference number: 3 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMQKQES*DSTSVE
Trigger: CTCCACCGATGTGGAATCCAATGATTCCTGCTTTTG...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTAGAAACTGGGGTTTCTaGTACTTGATAAGCACTTGT +
Preference number: 3 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFRNWGF*YLISTC
Trigger: ACAAGTGCTTATCAAGTACAAGAAACCCCAGTTTCT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTAGTCACCAACAAAATTaGATAGCTCATGTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFSHQQN*IAHVLG
Trigger: TCCCAAGACATGAGCTATCAAATTTTGTTGGTGACT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp GTGGTTACAACAGGAGCTACAAAGCCATGGTTTCCTTaGAAGAGGTCAAAAGCAGGAATCATTGGATTCCAC +
Preference number: 3 (lower is better)
Translates to: VVTTGATKPWFP*KRSKAGIIGFH
Trigger: GTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCCTGTTGTAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp TGTGCAGCTGTGGTTACAACAGGAGCTACAAAGCCATaGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATT +
Preference number: 3 (lower is better)
Translates to: CAAVVTTGATKP*FPWKRSKAGII
Trigger: AATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCCTGTTGTAACCACAGCTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp GTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTaGCCATCGCTGGAGTGGGATTCAATATCTCGGTTT +
Preference number: 3 (lower is better)
Translates to: VMPIPDSLWSEI*PSLEWDSISRF
Trigger: AAACCGAGATATTGAATCCCACTCCAGCGATGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGAAATGTCTGCTCTTTaGGAAAACCATTCTGTACTT +
Preference number: 3 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFEMSAL*ENHSVL
Trigger: AAGTACAGAATGGTTTTCCAAAAGAGCAGACATTTC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGATGTGGAGATCCTCGTaGCTGGACACAATCTGTATT +
Preference number: 3 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMMWRSS*LDTICI
Trigger: AATACAGATTGTGTCCAGCAACGAGGATCTCCACAT...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 72 bp AAACCAGTCTTTGGCATTCTTGATCTGTGTTCCCTCTaGGCTAAAGAATCAGATGAAGGCCAGTCACCCATA +
Preference number: 3 (lower is better)
Translates to: KPVFGILDLCSL*AKESDEGQSPI
Trigger: TATGGGTGACTGGCCTTCATCTGATTCTTTAGCTCAGAGGGAACACAGATCAAGAATGCCAAAGACTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 72 bp GAAATATACTTGTCATCGATTCATGGTTTTCAGGAGTaGCAGCTCTCATTTCCGCCTGCTCTGAGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: EIYLSSIHGFQE*QLSFPPALSFL
Trigger: GAGGAAACTCAGAGCAGGCGGAAATGAGAGCTGTCACTCCTGAAAACCATGAATCGATGACAAGTATATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR GCA 72 bp CTGCCATCCTCTACACTTTCATGTGGAGATCCTCGTTaGTGGACACAATCTGTATTCACAGATACACTGTTA +
Preference number: 3 (lower is better)
Translates to: LPSSTLSCGDPR*WTQSVFTDTLL
Trigger: TAACAGTGTATCTGTGAATACAGATTGTGTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAGGATGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATAAAGCCATGGTTTCCTaGGAAGAGGTCAAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYKAMVS*EEVKSR
Trigger: CCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp CCATCCTCTACACTTTCATGTGGAGATCCTCGTTGCTaGACACAATCTGTATTCACAGATACACTGTTAACT +
Preference number: 3 (lower is better)
Translates to: PSSTLSCGDPRC*TQSVFTDTLLT
Trigger: AGTTAACAGTGTATCTGTGAATACAGATTGTGTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp GTAGACTGTGAGTCAGCGTTACTAATACCAATCCCATaGCTAAACTCTGGCACAGGAGAATTAGAATTCTCT +
Preference number: 3 (lower is better)
Translates to: VDCESALLIPIP*LNSGTGELEFS
Trigger: AGAGAATTCTAATTCTCCTGTGCCAGAGTTTAGCCATGGGATTGGTATTAGTAACGCTGACTCACAGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTACTTTAGGATTCTTTaGGTACCAGCTCAATCCTAT +
Preference number: 3 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHYFRIL*VPAQSY
Trigger: ATAGGATTGAGCTGGTACCAAAAGAATCCTAAAGTA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR-3UTR CAA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTGATGATTCTTCTATCTaGGTATCAGTGGCAGATAAT +
Preference number: 3 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTDDSSI*VSVADN
Trigger: ATTATCTGCCACTGATACCAAGATAGAAGAATCATC...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGTTTCACTTTTGTCTGTaGCCTGTAGTTTGCTTTCAG +
Preference number: 3 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMFHFCL*PVVCFQ
Trigger: CTGAAAGCAAACTACAGGCAACAGACAAAAGTGAAA...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 72 bp CTGCGATGGAGTCACTTGCTACATTTAAAGAACTACTaGGAAGAGAATCTTCCGGGTAGTTACTTTCCAAAG +
Preference number: 3 (lower is better)
Translates to: LRWSHLLHLKNY*EENLPGSYFPK
Trigger: CTTTGGAAAGTAACTACCCGGAAGATTCTCTTCTCAGTAGTTCTTTAAATGTAGCAAGTGACTCCATCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTGGCAGTTCAGGATGTTaGTGTGGCTTGAAGTTGAAC +
Preference number: 3 (lower is better)
Translates to: SIELSVSVLLYPFTATISGSSGC*CGLKLN
Trigger: GTTCAACTTCAAGCCACACAAACATCCTGAACTGCC...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGAAGTGGTCCACTATTaGCAAGATCACAGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYEVVHY*QDHSLL
Trigger: AAGAAGACTGTGATCTTGCAAATAGTGGACCACTTC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTTCTGCTGCACCTACTaGGTTCTCAGAAGCAACGAA +
Preference number: 3 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWFCCTY*VLRSNE
Trigger: TTCGTTGCTTCTGAGAACCAAGTAGGTGCAGCAGAA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTTGTGTGGCTTGAAGTaGAACCCTTCGGAAGGTAGA +
Preference number: 3 (lower is better)
Translates to: SPSPKANLSHCLILENYTLCGLK*NPSEGR
Trigger: TCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTATTTCTCCATACTTTaGTTGGGGAAGTGTGAGAAA +
Preference number: 3 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYYFSIL*LGKCEK
Trigger: TTTCTCACACTTCCCCAACAAAAGTATGGAGAAATA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGTACTTGATAAGCACTaGTTCCATCTTTATTTCTCC +
Preference number: 3 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYVLDKH*FHLYFS
Trigger: GGAGAAATAAAGATGGAACAAGTGCTTATCAAGTAC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTTGCTCGTTTTCACTTTaGTCTGTTGCCTGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: SIELSVSVLLYPFTATISCSFSL*SVACSL
Trigger: CAAACTACAGGCAACAGACAAAAGTGAAAACGAGCA...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 72 bp TCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTaGAGTGGTCCACTATTTGCAAGATCACAGTCTTCT +
Preference number: 3 (lower is better)
Translates to: SSTISPGEDFSF*SGPLFARSQSS
Trigger: AGAAGACTGTGATCTTGCAAATAGTGGACCACTTCAAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp TGCAAGTTCCTTTGGTTTAAACTTCCACCATGTGTCTaGTTCCCGAAAAAGGACTTTATATTTGTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: CKFLWFKLPPCV*FPKKDFIFVFL
Trigger: CAGAAACACAAATATAAAGTCCTTTTTCGGGAACCAGACACATGGTGGAAGTTTAAACCAAAGGAACTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCTGCGATGGAGTCACTaGCTACATTTAAAGAACTAC +
Preference number: 3 (lower is better)
Translates to: SPSPKANLSHCLILENYTLRWSH*LHLKNY
Trigger: GTAGTTCTTTAAATGTAGCAAGTGACTCCATCGCAG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTTCTCAAATGCTTCTTTaGCACGATTCTGGTTCCATT +
Preference number: 3 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFSQMLL*HDSGSI
Trigger: AATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGA...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CCA 72 bp GTATGTCATTATTATTCTTTAGACCCACAGCAGCACTaGGAAATATACTTGTCATCGATTCATGGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: VCHYYSLDPQQH*EIYLSSIHGFQ
Trigger: CTGAAAACCATGAATCGATGACAAGTATATTTCCCAGTGCTGCTGTGGGTCTAAAGAATAATAATGACATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR-3UTR CAA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGACTTGGATTATCCTCTaGCAAAGTCCTTGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWTWIIL*QSPCQK
Trigger: TTTTTGGCAAGGACTTTGCAAGAGGATAATCCAAGT...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR TCA 72 bp ACCTACAAATGTAAAATGCTCTGTGAGTATTTCCTTTaGGCATCATGTCTGTGCTCGAAAAATTTCAGATTT +
Preference number: 3 (lower is better)
Translates to: TYKCKMLCEYFL*ASCLCSKNFRF
Trigger: AAATCTGAAATTTTTCGAGCACAGACATGATGCTCAAAGGAAATACTCACAGAGCATTTTACATTTGTAGGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR TCA 72 bp TTTCTCTGGAACCGAAGAACTCATAATTATTGGCACTaGAACAAAACGTTGATAATGTTCCAACATTCTTGT +
Preference number: 3 (lower is better)
Translates to: FLWNRRTHNYWH*NKTLIMFQHSC
Trigger: ACAAGAATGTTGGAACATTATCAACGTTTTGTTTCAGTGCCAATAATTATGAGTTCTTCGGTTCCAGAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTGGGCGTCGAAGCCGGTaGCGCGTCGTCGAACGCACA +
Preference number: 4 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLGRRSR*RVVERT
Trigger: TGTGCGTTCGACGACGCGGCACCGGCTTCGACGCCC...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAGGCTAGCAAGCAGCTaGGGCCGCGGGGGAGACACG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHRLASS*GRGGDT
Trigger: CGTGTCTCCCCCGCGGCCGCAGCTGCTTGCTAGCCT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261435.11
CDS-3UTR CCA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTACTCCTCCCTGGCTGTaGTTTCCTCTCCCCGTAATC +
Preference number: 4 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLTPPWL*FPLPVI
Trigger: GATTACGGGGAGAGGAAACCACAGCCAGGGAGGAGT...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGTGGATTCCACATCGGTaGAGGTGGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMWIPHR*RWRRRQ
Trigger: TTGCCTCCTCCGCCACCTCCACCGATGTGGAATCCA...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGAGGTGGCGTCCGATAAGCTTCTTTaGCCTTGCTGTAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LGRGQKQESLDSTSVEVASDKLL*PCCSTP
Trigger: TGGAGTGCTACAGCAAGGCCAAAGAAGCTTATCGGA...CGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGCTGTGCACAAGAACTaGCACCTAGTAAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFAVHKN*HLVSTQ
Trigger: TTGGGTGCTTACTAGGTGCCAGTTCTTGTGCACAGC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGTGGAAATGTGTAGTTaGCAGATCTCCAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFVEMCS*QISSVQ
Trigger: CTGCACACTGGAGATCTGTCAACTACACATTTCCAC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTATCCTCTTCTGTTGGTaGAGGAAAGCCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLILFCW*RKASAL
Trigger: CAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGAT...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGGGCGTCGAAGCCGGTaGCGCGTCGTCGAACGCACA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTGRRSR*RVVERT
Trigger: TGTGCGTTCGACGACGCGGCACCGGCTTCGACGCCC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTGACAGATCTCCAGTGTaGAGCTGTGGTTACAACAGG +
Preference number: 4 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLDRSPV*SCGYNR
Trigger: CCTGTTGTAACCACAGCTGCACACTGGAGATCTGTC...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCGTCACCCAGGCTGAGTaGAGTGGTGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSVTQAE*SGVISI
Trigger: GATCGAGATCACACCACTGCACTCAGCCTGGGTGAC...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGACCCACAGCAGCACTaGGAAATATACTTGTCATCG +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFDPQQH*EIYLSS
Trigger: CGATGACAAGTATATTTCCCAGTGCTGCTGTGGGTC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTCCGATAAGCTTCTTTaGCCTTGCTGTAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFSDKLL*PCCSTP
Trigger: TGGAGTGCTACAGCAAGGCCAAAGAAGCTTATCGGA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR CAA 72 bp CTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTaGTGTGGCTTGAAGTTGAACCCTTCGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LTSFPLVGSSGC*CGLKLNPSEGR
Trigger: TCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 72 bp AAGCTATGGCTTATGAGGTACTTAATGACAGCTGGTTaGATGCGAGCAACTCCTCCCTGGCTGTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLWLMRYLMTAG*MRATPPWLWFP
Trigger: AGGAAACCACAGCCAGGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTACCTCATAAGCCATAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TACCGGGCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGAGGTTTAAACAAGCCTaGGGTTCACTGGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: YRAVTHILPLSWQFRMFVRFKQA*GSLASK
Trigger: TTTGGATGCCAGTGAACCTCAGGCTTGTTTAAACCT...CACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TACCGGGCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGCACAGGTCATTTCACTaGGCAGCATTTCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: YRAVTHILPLSWQFRMFVHRSFH*AAFQNF
Trigger: GAAGTTCTGAAATGCTGCTCAGTGAAATGACCTGTG...CACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTGGCCAGGCTGGTCTTaGACTTCTGACCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYWPGWS*TSDLRR
Trigger: TCGCCTGAGGTCAGAAGTTCAAGACCAGCCTGGCCA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATGTGAGTATTTCCTTTaGGCATCATGTCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPCEYFL*ASCLCS
Trigger: CGAGCACAGACATGATGCTCAAAGGAAATACTCACA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAACATGTCTTCTTACTaGTTCTGGAGCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHNMSSY*FWSGQR
Trigger: CCTCTGCCCGCTCCAGAAGCAGTAAGAAGACATGTT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTGAGACTGCTACAACCTaGGATGGAGTCACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTETATT*DGVTCY
Trigger: GTAGCAAGTGACTCCATCGCAGGTTGTAGCAGTCTC...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGACAGATCTCCAGTGTaGAGCTGTGGTTACAACAGG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHDRSPV*SCGYNR
Trigger: CCTGTTGTAACCACAGCTGCACACTGGAGATCTGTC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATCTGCTGCACCTACTTaGTTCTCAGAAGCAACGAAA +
Preference number: 4 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPSAAPT*FSEATK
Trigger: TTTCGTTGCTTCTGAGAACCAAGTAGGTGCAGCAGA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTAAGCCATGGTTTCCTTaGAAGAGGTCAAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFKPWFP*KRSKAG
Trigger: TCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCACTTCCACCATGTGTCTaGTTCCCGAAAAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPLPPCV*FPKKDF
Trigger: AAAGTCCTTTTTCGGGAACCAGACACATGGTGGAAG...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTAGATTTGGCCATCGCTaGAGTGGGATTCAATATCTC +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFRFGHR*SGIQYL
Trigger: GAGATATTGAATCCCACTCCAGCGATGGCCAAATCT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGAGGTGGCGGATGTGTGTTGCCCATaGCTCTTTTTACTTAGACAA +
Preference number: 4 (lower is better)
Translates to: LGRGQKQESLDSTSVEVADVCCP*LFLLRQ
Trigger: TTGTCTAAGTAAAAAGAGTCATGGGCAACACACATC...CGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCCATGGTTTTCAGGAGTaGCAGCTCTCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSHGFQE*QLSFPP
Trigger: AGGCGGAAATGAGAGCTGTCACTCCTGAAAACCATG...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCAGACTTCTGGCCAGTATaGGATGTGACATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPDFWPV*DVTFSF
Trigger: AAATGAGAATGTCACATCTCATACTGGCCAGAAGTC...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGTCGATCTCGGGTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMSISGH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGACCCGAGATCGA...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTGCTACAACCTGCGATaGAGTCACTTGCTACATTTA +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFCYNLR*SHLLHL
Trigger: TAAATGTAGCAAGTGACTCCATCGCAGGTTGTAGCA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TACCGGGCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTTCAGGATGTTTGTGTaGCTTGAAGTTGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: YRAVTHILPLSWQFRMFVFRMFV*LEVEPF
Trigger: GAAGGGTTCAACTTCAAGCCACACAAACATCCTGAA...CACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGGAGCTACAAAGCCATaGTTTCCTTGGAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHGATKP*FPWKRS
Trigger: TGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTCTTGTCATCGATTCATaGTTTTCAGGAGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFLVIDS*FSGVTA
Trigger: AGCTGTCACTCCTGAAAACCATGAATCGATGACAAG...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCACTTGTCATCGATTCATaGTTTTCAGGAGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPLVIDS*FSGVTA
Trigger: AGCTGTCACTCCTGAAAACCATGAATCGATGACAAG...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCCAACTGGACACCCTCTaGGGTTTCCACATTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSQLDTL*GFHISP
Trigger: AGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTG...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 72 bp GGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTaGGCCATCGCTGGAGTGGGATTCAATATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GNANSRQSMVRD*AIAGVGFNISV
Trigger: AACCGAGATATTGAATCCCACTCCAGCGATGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 72 bp TTCTTTGGCCTTGCTGTAGCACTCCATCCTCTTCTGTaGGTGAAGGAAAGCCTCTGCTCTGTAGTCATCATA +
Preference number: 4 (lower is better)
Translates to: FFGLAVALHPLL*VKESLCSVVII
Trigger: TATGATGACTACAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAGTGCTACAGCAAGGCCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTCTTTGCTTACCCCATaGATGTTACGCCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHSLLTP*MLRLAS
Trigger: ACTTGCAAGGCGTAACATTCATGGGGTAAGCAAAGA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCTGGTCTTGAACTTCTaGCCTCAGGCGATCCACCTA +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYLVLNF*PQAIHL
Trigger: TAGGTGGATCGCCTGAGGTCAGAAGTTCAAGACCAG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTGGCCAGGCTGGTCTTaGACTTCTGACCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIWPGWS*TSDLRR
Trigger: TCGCCTGAGGTCAGAAGTTCAAGACCAGCCTGGCCA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTGTGAGTATTTCCTTTaGGCATCATGTCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHCEYFL*ASCLCS
Trigger: CGAGCACAGACATGATGCTCAAAGGAAATACTCACA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGTCAGAGCAATTTCCTaGGTTTCCAAAGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFVRAIS*VSKVSN
Trigger: ATTGGAAACTTTGGAAACTCAGGAAATTGCTCTGAC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTGCCACAGTTGATATATaGAAACTCTACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFATVDI*KLYTSS
Trigger: AGAAGAGGTGTAGAGTTTGCATATATCAACTGTGGC...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTCTCAAATGCTTCTTTTaGACGATTCTGGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFLKCFF*TILVPF
Trigger: GAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAG...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp CTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGAGGTGGCGATCCTCACAAGAATATaGACACAACTCAATACGTTC +
Preference number: 4 (lower is better)
Translates to: LGRGQKQESLDSTSVEVAILTRI*TQLNTF
Trigger: GAACGTATTGAGTTGTGTGCATATTCTTGTGAGGAT...CGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTGTGGAGATCCTCGTTaGTGGACACAATCTGTATTC +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHCGDPR*WTQSVF
Trigger: GAATACAGATTGTGTCCAGCAACGAGGATCTCCACA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGCTCTCATTTCCGCCTaGTCTGAGTTTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMALISA*SEFPLS
Trigger: AGAAAGAGGAAACTCAGAGCAGGCGGAAATGAGAGC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCGATCTCGGGTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISISGH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGACCCGAGATCGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATATCCTTCCCCTTAGTTaGCAGTTCAGGATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHILPLS*QFRMFV
Trigger: CACAAACATCCTGAACTGCCAACTAAGGGGAAGGAT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGTCCAGTGTGCAGCTGTaGTTACAACAGGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMSSVQL*LQQELQ
Trigger: TTGTAGCTCCTGTTGTAACCACAGCTGCACACTGGA...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTTCCAATTTCTAGGTTaGGCTCACTTAAACCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFFQFLG*AHLNQS
Trigger: AGACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTAAGAGCAAAATCCTGTaGTTCAGTCTGGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTKSKIL*FSLGAH
Trigger: ATGTGCACCCAGACTGAACCACAGGATTTTGCTCTT...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATCTAATACCAATCCCATaGCTAAACTCTGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHLIPIP*LNSGTG
Trigger: TCCTGTGCCAGAGTTTAGCCATGGGATTGGTATTAG...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGACCCACAGCAGCACTaGGAAATATACTTGTCATCG +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMDPQQH*EIYLSS
Trigger: CGATGACAAGTATATTTCCCAGTGCTGCTGTGGGTC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGGGTACTCAAAGTCCTaGAAAGACAGTTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHGYSKS*KDSSLG
Trigger: ACCAAGTGAACTGTCTTTCCAGGACTTTGAGTACCC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGTACTTAATGACAGCTaGTTTGATGCGAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHVLNDS*FDASNS
Trigger: GGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTAC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR CAA 72 bp TTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTGAAGTaGAACCCTTCGGAAGGTAGAAACACATCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LVGSSGCLCGLK*NPSEGRNTSET
Trigger: GGTCTCTGATGTGTTTCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 72 bp TTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTaGAAGTTGAACCCTTCGGAAGGTAGAAACACATCA +
Preference number: 4 (lower is better)
Translates to: FPLVGSSGCLCG*KLNPSEGRNTS
Trigger: TGATGTGTTTCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCTCTTTGCTTACCCCATaGATGTTACGCCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSSLLTP*MLRLAS
Trigger: ACTTGCAAGGCGTAACATTCATGGGGTAAGCAAAGA...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATATCACAAGTAGACTGTaGGTCAGCGTTACTAATACC +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHITSRL*VSVTNT
Trigger: GGTATTAGTAACGCTGACTCACAGTCTACTTGTGAT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCATGGTTTTCAGGAGTaGCAGCTCTCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYHGFQE*QLSFPP
Trigger: AGGCGGAAATGAGAGCTGTCACTCCTGAAAACCATG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATATCCTCTTCTGTTGGTaGAGGAAAGCCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYILFCW*RKASAL
Trigger: CAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGAT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTTCATCTTCTGCTCATaGAGAGTACCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYFIFCS*RVPCWA
Trigger: TGCCCAGCAGGGTACTCTTCATGAGCAGAAGATGAA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp CTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGAGGTGGCGATGAATGTTACGCCTTaGAAGTTCCTTTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LGRGQKQESLDSTSVEVAMNVTP*KFLWFK
Trigger: TTTAAACCAAAGGAACTTGCAAGGCGTAACATTCAT...CGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGTGTGGAGATCCTCGTTaGTGGACACAATCTGTATTC +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMCGDPR*WTQSVF
Trigger: GAATACAGATTGTGTCCAGCAACGAGGATCTCCACA...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGTTTTTGAGAGCTTGTaGCCCAACAGGCCTCATGTG +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYVFESL*PNRPHV
Trigger: CACATGAGGCCTGTTGGGGCACAAGCTCTCAAAAAC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTCCAGAAACAGTTGGTaGACTATTGGTAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFSRNSW*TIGKSK
Trigger: CTTACTTTTACCAATAGTGCACCAACTGTTTCTGGA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTATTTTCAGATTCATCTaGACTGGTAAGCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFIFRFI*TGKLTF
Trigger: GAAAGTGAGCTTACCAGTGCAGATGAATCTGAAAAT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTCGATCTCGGGTCACTaGAACCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTSISGH*NLHLPG
Trigger: ACCTGGGAGGTGGAGGTTGCAGTGACCCGAGATCGA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTCACCCAGGCTGAGTaGAGTGGTGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVTQAE*SGVISI
Trigger: GATCGAGATCACACCACTGCACTCAGCCTGGGTGAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTTTTCATTTGACTTCTaGCCACGGAATACCACACCT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHFSFDF*PRNTTP
Trigger: AGGTGTGGTATTCCGTGGGCAGAAGTCAAATGAAAA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTCAAACTTCACCTCATTaGACAATGGAAAAGCACTTA +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFQTSPH*TMEKHL
Trigger: TAAGTGCTTTTCCATTGTGCAATGAGGTGAAGTTTG...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCTTCTTACTGCTTCTaGAGCGGGCAGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSSYCF*SGQRAS
Trigger: CGACGCCCTCTGCCCGCTCCAGAAGCAGTAAGAAGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTCTTCTTACTGCTTCTaGAGCGGGCAGAGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWSSYCF*SGQRAS
Trigger: CGACGCCCTCTGCCCGCTCCAGAAGCAGTAAGAAGA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGATCCTTCCCCTTAGTTaGCAGTTCAGGATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMILPLS*QFRMFV
Trigger: CACAAACATCCTGAACTGCCAACTAAGGGGAAGGAT...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATGGATTCCACATCGGTaGAGGTGGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTWIPHR*RWRRRQ
Trigger: TTGCCTCCTCCGCCACCTCCACCGATGTGGAATCCA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCAAAAGCAGGAATCATTaGATTCCACATCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSKSRNH*IPHRWR
Trigger: CCTCCACCGATGTGGAATCCAATGATTCCTGCTTTT...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATACTCCAGAAACAGTTaGTGCACTATTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPYSRNS*CTIGKS
Trigger: ACTTTTACCAATAGTGCACCAACTGTTTCTGGAGTA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTCCTGTGGTTCAGTCTaGGTGCACATGCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYSCGSV*VHMPTS
Trigger: AGAAGTAGGCATGTGCACCCAGACTGAACCACAGGA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCTATGGTCAGAGATTTaGCCATCGCTGGAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYLWSEI*PSLEWD
Trigger: ATCCCACTCCAGCGATGGCCAAATCTCTGACCATAG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGTAGTCATCATAGTCTaGGTACTCAAAGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHVVIIV*VLKVLE
Trigger: TTCCAGGACTTTGAGTACCCAGACTATGATGACTAC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTACTCCTCCCTGGCTGTaGTTTCCTCTCCCCGTAATC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDITPPWL*FPLPVI
Trigger: GATTACGGGGAGAGGAAACCACAGCCAGGGAGGAGT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
3UTR CAA 72 bp TCTGCCATCCTCTACACTTTCATGTGGAGATCCTCGTaGCTGGACACAATCTGTATTCACAGATACACTGTT +
Preference number: 4 (lower is better)
Translates to: SAILYTFMWRSS*LDTICIHRYTV
Trigger: AACAGTGTATCTGTGAATACAGATTGTGTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAGGATGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTATCAGAAAATATCTCTaGGATACTGGTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLIRKYL*DTGEEF
Trigger: GAACTCTTCACCAGTATCTCAGAGATATTTTCTGAT...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTACCCGAGTAGATTTCTaGTCCCCACCTGTACCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFTRVDF*SPPVPG
Trigger: ACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGT...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGATTCTTCTCTTCAGTaGACTCTAGATGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHDSSLQ*TLDASK
Trigger: CTTTGAAGCATCTAGAGTTCACTGAAGAGAAGAATC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTTACTTAGACAAGTCTaGCTCTCACAGGTCATTTCA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHLLRQV*LSQVIS
Trigger: TGAAATGACCTGTGAGAGTCAGACTTGTCTAAGTAA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGATGTGTGTTGCCCATaGCTCTTTTTACTTAGACAA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHDVCCP*LFLLRQ
Trigger: TTGTCTAAGTAAAAAGAGTCATGGGCAACACACATC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTTTAGGCATTTGCTCTTaGCATTCAGCTAACGTTTGT +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTLGICS*HSANVC
Trigger: ACAAACGTTAGCTGAATGTCAAGAGCAAATGCCTAA...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAAAAGGCCCAATTTGTaGTCCATCACACGATTTTTG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHKRPNL*SITRFL
Trigger: CAAAAATCGTGTGATGGATCACAAATTGGGCCTTTT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGTTCATCTTCTGCTCATaGAGAGTACCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMFIFCS*RVPCWA
Trigger: TGCCCAGCAGGGTACTCTTCATGAGCAGAAGATGAA...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCTGGTCTTGAACTTCTaGCCTCAGGCGATCCACCTA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILVLNF*PQAIHL
Trigger: TAGGTGGATCGCCTGAGGTCAGAAGTTCAAGACCAG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGCTCTCATTTCCGCCTaGTCTGAGTTTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYALISA*SEFPLS
Trigger: AGAAAGAGGAAACTCAGAGCAGGCGGAAATGAGAGC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTATACCTGGAAAGGACTaGTTACTGCTATATAAAAGT +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFIPGKD*LLLYKS
Trigger: ACTTTTATATAGCAGTAAGCAGTCCTTTCCAGGTAT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTCACCCAGGCTGAGTaGAGTGGTGTGATCTCGATC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVTQAE*SGVISI
Trigger: GATCGAGATCACACCACTGCACTCAGCCTGGGTGAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTACCTCTACTTCTGACTaGTCCTTCATTAATCATAAT +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFTSTSD*SFINHN
Trigger: ATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTAAAAATGAGTATACTTaGTCATCAGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFKNEYT*SSGEEF
Trigger: GAACTCTTCTCCTGATGACCAAGTATACTCATTTTT...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAACTCCTCCCTGGCTGTaGTTTCCTCTCCCCGTAATC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTTPPWL*FPLPVI
Trigger: GATTACGGGGAGAGGAAACCACAGCCAGGGAGGAGT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGAGAACCTGAAGCTATaGCTTATGAGGTACTTAATG +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHENLKL*LMRYLM
Trigger: CATTAAGTACCTCATAAGCCATAGCTTCAGGTTCTC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
3UTR CAA 72 bp TTCCAATTTCTAGGTTGGGCTCACTTAAACCAGTCTTaGGCATTCTTGATCTGTGTTCCCTCTGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: FQFLGWAHLNQS*AFLICVPSELK
Trigger: CTTTAGCTCAGAGGGAACACAGATCAAGAATGCCAAAGACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAGTTCTTTCTGTTTTTaGTTGAGACTGCTACAACCT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHSSFCF*LRLLQP
Trigger: AGGTTGTAGCAGTCTCAATCAAAAACAGAAAGAACT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAACCCGAGTAGATTTCTaGTCCCCACCTGTACCTGGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTTRVDF*SPPVPG
Trigger: ACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGGTGGAAATGTGTAGTTaGCAGATCTCCAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMVEMCS*QISSVQ
Trigger: CTGCACACTGGAGATCTGTCAACTACACATTTCCAC...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGAGGATTTTTCATTTTaGAGTGGTCCACTATTTGCA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHEDFSF*SGPLFA
Trigger: TGCAAATAGTGGACCACTTCAAAATGAAAAATCCTC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTCACTATTTCACCAGGTaGGGATTTTTCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTHYFTR*GFFILK
Trigger: CTTCAAAATGAAAAATCCTCACCTGGTGAAATAGTG...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATCATATTTATAGCTATTaGGTGGCTCTGAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHHIYSY*VALKHH
Trigger: ATGATGCTTCAGAGCCACTCAATAGCTATAAATATG...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTCATATTTATAGCTATTaGGTGGCTCTGAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTHIYSY*VALKHH
Trigger: ATGATGCTTCAGAGCCACTCAATAGCTATAAATATG...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCACAGGTCATTTCACTaGGCAGCATTTCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYHRSFH*AAFQNF
Trigger: GAAGTTCTGAAATGCTGCTCAGTGAAATGACCTGTG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTTTTTTGCCTGTTCTCTaGGATGATTTTTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTFLPVL*DDFCSG
Trigger: TCCTGAACAAAAATCATCTCAGAGAACAGGCAAAAA...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTCATCTTCTGCTCATaGAGAGTACCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIFIFCS*RVPCWA
Trigger: TGCCCAGCAGGGTACTCTTCATGAGCAGAAGATGAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGCTGGTCTTGAACTTCTaGCCTCAGGCGATCCACCTA +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWLVLNF*PQAIHL
Trigger: TAGGTGGATCGCCTGAGGTCAGAAGTTCAAGACCAG...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGTCAGAGCAATTTCCTaGGTTTCCAAAGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMVRAIS*VSKVSN
Trigger: ATTGGAAACTTTGGAAACTCAGGAAATTGCTCTGAC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAACATGTCTTCTTACTaGTTCTGGAGCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDINMSSY*FWSGQR
Trigger: CCTCTGCCCGCTCCAGAAGCAGTAAGAAGACATGTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGCCACAGTTGATATATaGAAACTCTACACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMATVDI*KLYTSS
Trigger: AGAAGAGGTGTAGAGTTTGCATATATCAACTGTGGC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTCGATGCTGTCAACATaGTCATTAAGGCCACAGTTG +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYSMLST*SLRPQL
Trigger: CAACTGTGGCCTTAATGAGCATGTTGACAGCATCGA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGACAGATCTCCAGTGTaGAGCTGTGGTTACAACAGG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIDRSPV*SCGYNR
Trigger: CCTGTTGTAACCACAGCTGCACACTGGAGATCTGTC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGCCACCATTTCTATTTaGTCGTTTTCACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHATISI*SFSLLS
Trigger: AGACAAAAGTGAAAACGAGCAAATAGAAATGGTGGC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTTTTTGAGAGCTTGTaGCCCAACAGGCCTCATGTG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVFESL*PNRPHV
Trigger: CACATGAGGCCTGTTGGGGCACAAGCTCTCAAAAAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCAGTCTGGGTGCACATaGCTACTTCTTTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIQSGCT*LLLFQG
Trigger: ACCCTGGAAAAGAAGTAGGCATGTGCACCCAGACTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGTGAAGGAAAGCCTCTaGTCTGTAGTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYVKESL*SVVIIV
Trigger: GACTATGATGACTACAGAGCAGAGGCTTTCCTTCAC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGGGAGCTACAAAGCCATaGTTTCCTTGGAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMGATKP*FPWKRS
Trigger: TGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCC...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTTACAACCTGAGAAACTaGGGTTTCTTGTACTTGATA +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTYNLRN*GFLYLI
Trigger: TATCAAGTACAAGAAACCCCAGTTTCTCAGGTTGTA...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAAGAATGACTCCACTTaGATTATCCTCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHKNDST*IILLQS
Trigger: ACTTTGCAAGAGGATAATCCAAGTGGAGTCATTCTT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGTCTTTTGCACGATTCTaGTTCCATTCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMSFARF*FHSCAS
Trigger: AGAAGCACATGAATGGAACCAGAATCGTGCAAAAGA...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCTTCCACCATGTGTCTaGTTCCCGAAAAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYLPPCV*FPKKDF
Trigger: AAAGTCCTTTTTCGGGAACCAGACACATGGTGGAAG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGGAGATCCTCGTTGCTaGACACAATCTGTATTCACA +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYGDPRC*TQSVFT
Trigger: TGTGAATACAGATTGTGTCCAGCAACGAGGATCTCC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTTATAAAAGTTCTTCCTaGCTGTTAGGAAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLYKSSS*LLGSMS
Trigger: TGACATACTTCCTAACAGCCAGGAAGAACTTTTATA...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCTATGGTCAGAGATTTaGCCATCGCTGGAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILWSEI*PSLEWD
Trigger: ATCCCACTCCAGCGATGGCCAAATCTCTGACCATAG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGGGTACTCAAAGTCCTaGAAAGACAGTTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYGYSKS*KDSSLG
Trigger: ACCAAGTGAACTGTCTTTCCAGGACTTTGAGTACCC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCGAGAACCTGAAGCTATaGCTTATGAGGTACTTAATG +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSENLKL*LMRYLM
Trigger: CATTAAGTACCTCATAAGCCATAGCTTCAGGTTCTC...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGACTTTCAAGCACCCTaGTTTAATTTCAGAGAACCT +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMDFQAP*FNFREP
Trigger: AGGTTCTCTGAAATTAAACCAGGGTGCTTGAAAGTC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGTTTGTTGGGGAAGTGTaGGAAATAACTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMFVGEV*EITEGG
Trigger: TCCACCCTCAGTTATTTCTCACACTTCCCCAACAAA...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTATCCCGGAAGACCTCTaGGAAGAACAAGAACTAGTC +
Preference number: 4 (lower is better)
Translates to: SIELSVSVLLYPFTATISIPEDL*EEQELV
Trigger: GACTAGTTCTTGTTCTTCTCAGAGGTCTTCCGGGAT...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACATGGTTTTCAGGAGTaGCAGCTCTCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTHGFQE*QLSFPP
Trigger: AGGCGGAAATGAGAGCTGTCACTCCTGAAAACCATG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGACTTCTGGCCAGTATaGGATGTGACATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYDFWPV*DVTFSF
Trigger: AAATGAGAATGTCACATCTCATACTGGCCAGAAGTC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAATCCTCTTCTGTTGGTaGAGGAAAGCCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTILFCW*RKASAL
Trigger: CAGAGCAGAGGCTTTCCTTCACCAACAGAAGAGGAT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGAGACTGCTACAACCTaGGATGGAGTCACTTGCTAC +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTETATT*DGVTCY
Trigger: GTAGCAAGTGACTCCATCGCAGGTTGTAGCAGTCTC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTTATCTTCTTCTCAAATaGTTCTTTTGCACGATTCTG +
Preference number: 4 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTYLLLK*FFCTIL
Trigger: CAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATA...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCCTGTTGCCTGTAGTTTaGTTTCAGAGTCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSLLPVV*FQSQKN
Trigger: ATTTTTCTGACTCTGAAAGCAAACTACAGGCAACAG...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGCCACCATTTCTATTTaGTCGTTTTCACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMATISI*SFSLLS
Trigger: AGACAAAAGTGAAAACGAGCAAATAGAAATGGTGGC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTTTTTGAGAGCTTGTaGCCCAACAGGCCTCATGTG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVFESL*PNRPHV
Trigger: CACATGAGGCCTGTTGGGGCACAAGCTCTCAAAAAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGTCCAGAAACAGTTGGTaGACTATTGGTAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMSRNSW*TIGKSK
Trigger: CTTACTTTTACCAATAGTGCACCAACTGTTTCTGGA...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACAGTCTGGGTGCACATaGCTACTTCTTTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTQSGCT*LLLFQG
Trigger: ACCCTGGAAAAGAAGTAGGCATGTGCACCCAGACTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTGTGGTTCAGTCTGGGTaGACATGCCTACTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFVVQSG*TCLLLF
Trigger: GAAAAGAAGTAGGCATGTGCACCCAGACTGAACCAC...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAAGCTTCTTTGGCCTTaGTGTAGCACTCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIKLLWP*CSTPSS
Trigger: AGAGGATGGAGTGCTACAGCAAGGCCAAAGAAGCTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATACCTCTACTTCTGACTaGTCCTTCATTAATCATAAT +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHTSTSD*SFINHN
Trigger: ATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAAGCCTGAGGTTCACTaGCATCCAAATCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIKPEVH*HPNLQE
Trigger: CTCCTGTAGATTTGGATGCCAGTGAACCTCAGGCTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCCAGTGTGCAGCTGTaGTTACAACAGGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISSVQL*LQQELQ
Trigger: TTGTAGCTCCTGTTGTAACCACAGCTGCACACTGGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCTCTACACTTTCATGTaGAGATCCTCGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILYTFM*RSSLLD
Trigger: GTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTCTCTACACTTTCATGTaGAGATCCTCGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFLYTFM*RSSLLD
Trigger: GTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAG...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCCTGTGGTTCAGTCTaGGTGCACATGCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSCGSV*VHMPTS
Trigger: AGAAGTAGGCATGTGCACCCAGACTGAACCACAGGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATCCATCACACGATTTTTaGAAATTCTCAAACTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHPSHDF*KFSNSV
Trigger: TACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGG...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTTGGCCATCGCTGGAGTaGGATTCAATATCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: SIELSVSVLLYPFTATISWPSLE*DSISRF
Trigger: AAACCGAGATATTGAATCCCACTCCAGCGATGGCCA...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTGGCCATCGCTGGAGTaGGATTCAATATCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIWPSLE*DSISRF
Trigger: AAACCGAGATATTGAATCCCACTCCAGCGATGGCCA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTCTCAAAGATCTCTATaGCAGCAAGGTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYSQRSL*QQGDWL
Trigger: AAGCCAATCACCTTGCTGCCATAGAGATCTTTGAGA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACAACTGGACACCCTCTaGGGTTTCCACATTAGTCCT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTQLDTL*GFHISP
Trigger: AGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAGGTTTAAACAAGCCTaGGGTTCACTGGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIRFKQA*GSLASK
Trigger: TTTGGATGCCAGTGAACCTCAGGCTTGTTTAAACCT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTGGAAATGTGTAGTTaGCAGATCTCCAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVEMCS*QISSVQ
Trigger: CTGCACACTGGAGATCTGTCAACTACACATTTCCAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAATCCCGGAAGACCTCTaGGAAGAACAAGAACTAGTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTIPEDL*EEQELV
Trigger: GACTAGTTCTTGTTCTTCTCAGAGGTCTTCCGGGAT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTTAGGCATTTGCTCTTaGCATTCAGCTAACGTTTGT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYLGICS*HSANVC
Trigger: ACAAACGTTAGCTGAATGTCAAGAGCAAATGCCTAA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGCAGCAGCGAAGCATTaGCTTTCTCAAAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIAAAKH*LSQRSL
Trigger: TAGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCGATGCTGTCAACATaGTCATTAAGGCCACAGTTG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISMLST*SLRPQL
Trigger: CAACTGTGGCCTTAATGAGCATGTTGACAGCATCGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATAACTTCCTTAGGGTTTaGAGTCTTCCGAAAAGGATT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYNFLRV*SLPKRI
Trigger: AATCCTTTTCGGAAGACTGCAAACCCTAAGGAAGTT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGCACACTGTGACTTTCTaGCATCCTCTACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMHTVTF*HPLHFH
Trigger: ATGAAAGTGTAGAGGATGGCAGAAAGTCACAGTGTG...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGTGGTTCAGTCTGGGTaGACATGCCTACTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTVVQSG*TCLLLF
Trigger: GAAAAGAAGTAGGCATGTGCACCCAGACTGAACCAC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTGGTTCAGTCTGGGTaGACATGCCTACTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVVQSG*TCLLLF
Trigger: GAAAAGAAGTAGGCATGTGCACCCAGACTGAACCAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGCTCTCATTTCCGCCTaGTCTGAGTTTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTALISA*SEFPLS
Trigger: AGAAAGAGGAAACTCAGAGCAGGCGGAAATGAGAGC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTGAAGGAAAGCCTCTaGTCTGTAGTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVKESL*SVVIIV
Trigger: GACTATGATGACTACAGAGCAGAGGCTTTCCTTCAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCAAGCCTGAGGTTCACTaGCATCCAAATCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTKPEVH*HPNLQE
Trigger: CTCCTGTAGATTTGGATGCCAGTGAACCTCAGGCTT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAAAAGCAGGAATCATTaGATTCCACATCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIKSRNH*IPHRWR
Trigger: CCTCCACCGATGTGGAATCCAATGATTCCTGCTTTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGGAGCTACAAAGCCATaGTTTCCTTGGAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTGATKP*FPWKRS
Trigger: TGACCTCTTCCAAGGAAACCATGGCTTTGTAGCTCC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTCTTTTGCACGATTCTaGTTCCATTCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYSFARF*FHSCAS
Trigger: AGAAGCACATGAATGGAACCAGAATCGTGCAAAAGA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACTCTACACTTTCATGTaGAGATCCTCGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLYTFM*RSSLLD
Trigger: GTCCAGCAACGAGGATCTCCACATGAAAGTGTAGAG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGACCCACAGCAGCACTaGGAAATATACTTGTCATCG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTDPQQH*EIYLSS
Trigger: CGATGACAAGTATATTTCCCAGTGCTGCTGTGGGTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTGGCCATCGCTGGAGTaGGATTCAATATCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTWPSLE*DSISRF
Trigger: AAACCGAGATATTGAATCCCACTCCAGCGATGGCCA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCCGATAAGCTTCTTTaGCCTTGCTGTAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSDKLL*PCCSTP
Trigger: TGGAGTGCTACAGCAAGGCCAAAGAAGCTTATCGGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTACTTAATGACAGCTaGTTTGATGCGAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVLNDS*FDASNS
Trigger: GGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
3UTR CAA 72 bp AGACTTCTGGCCAGTATGAGATGTGACATTCTCATTTaGGTGAACAAACTCTTGGGCTACAACTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: RLLASMRCDILI*VNKLLGYNCFY
Trigger: GTAAAAACAGTTGTAGCCCAAGAGTTTGTTCACCAAAATGAGAATGTCACATCTCATACTGGCCAGAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTTCTCCTTGGCATTCTaGCTTCCAAAACTAAAATGT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYFSLAF*LPKLKC
Trigger: ACATTTTAGTTTTGGAAGTCAGAATGCCAAGGAGAA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATATCAGAAAATATCTCTaGGATACTGGTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYIRKYL*DTGEEF
Trigger: GAACTCTTCACCAGTATCTCAGAGATATTTTCTGAT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATAGTTCTTTCTGTTTTTaGTTGAGACTGCTACAACCT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYSSFCF*LRLLQP
Trigger: AGGTTGTAGCAGTCTCAATCAAAAACAGAAAGAACT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTTGTTGGGGAAGTGTaGGAAATAACTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTFVGEV*EITEGG
Trigger: TCCACCCTCAGTTATTTCTCACACTTCCCCAACAAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCTTTGCTTACCCCATaGATGTTACGCCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSLLTP*MLRLAS
Trigger: ACTTGCAAGGCGTAACATTCATGGGGTAAGCAAAGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTACAGCAAGTACTAGGTaGTACTCTCTCCATAGAACT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFTASTR*YSLHRT
Trigger: AGTTCTATGGAGAGAGTATCACCTAGTACTTGCTGT...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTACAGCAAGTACTAGGTaGTACTCTCTCCATAGAACT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDITASTR*YSLHRT
Trigger: AGTTCTATGGAGAGAGTATCACCTAGTACTTGCTGT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGAGGATTTTTCATTTTaGAGTGGTCCACTATTTGCA +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYEDFSF*SGPLFA
Trigger: TGCAAATAGTGGACCACTTCAAAATGAAAAATCCTC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCACTATTTCACCAGGTaGGGATTTTTCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYHYFTR*GFFILK
Trigger: CTTCAAAATGAAAAATCCTCACCTGGTGAAATAGTG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGATCTGTGTTCCCTCTaGGCTAAAGAATCAGATGAA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIDLCSL*AKESDE
Trigger: TTCATCTGATTCTTTAGCTCAGAGGGAACACAGATC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACACAGGTCATTTCACTaGGCAGCATTTCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTHRSFH*AAFQNF
Trigger: GAAGTTCTGAAATGCTGCTCAGTGAAATGACCTGTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCTATGGCAGCAAGGTaGTTGGCTTCTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSMAAR*LASFIF
Trigger: GAAGATGAAAGAAGCCAATCACCTTGCTGCCATAGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTCTATGGCAGCAAGGTaGTTGGCTTCTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWSMAAR*LASFIF
Trigger: GAAGATGAAAGAAGCCAATCACCTTGCTGCCATAGA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGCAGCAGCGAAGCATTaGCTTTCTCAAAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTAAAKH*LSQRSL
Trigger: TAGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGGCAGCAGCGAAGCATTaGCTTTCTCAAAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWAAAKH*LSQRSL
Trigger: TAGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGC...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTATTTTACTTTAGCATaGCTTTCAAGCACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYYFTLA*LSSTLV
Trigger: AACCAGGGTGCTTGAAAGTCATGCTAAAGTAAAATA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGCTCAAATGCTTCTTTTaGACGATTCTGGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMLKCFF*TILVPF
Trigger: GAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAG...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATGTGGAGATCCTCGTTaGTGGACACAATCTGTATTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTCGDPR*WTQSVF
Trigger: GAATACAGATTGTGTCCAGCAACGAGGATCTCCACA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCACACTGTGACTTTCTaGCATCCTCTACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIHTVTF*HPLHFH
Trigger: ATGAAAGTGTAGAGGATGGCAGAAAGTCACAGTGTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATATTTTCAGATTCATCTaGACTGGTAAGCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYIFRFI*TGKLTF
Trigger: GAAAGTGAGCTTACCAGTGCAGATGAATCTGAAAAT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTGAAGGAAAGCCTCTaGTCTGTAGTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVKESL*SVVIIV
Trigger: GACTATGATGACTACAGAGCAGAGGCTTTCCTTCAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTTTCATTTGACTTCTaGCCACGGAATACCACACCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIFSFDF*PRNTTP
Trigger: AGGTGTGGTATTCCGTGGGCAGAAGTCAAATGAAAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCTGCTGCACCTACTTaGTTCTCAGAAGCAACGAAA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSAAPT*FSEATK
Trigger: TTTCGTTGCTTCTGAGAACCAAGTAGGTGCAGCAGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAAAAGCAGGAATCATTaGATTCCACATCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTKSRNH*IPHRWR
Trigger: CCTCCACCGATGTGGAATCCAATGATTCCTGCTTTT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAAGCCATGGTTTCCTTaGAAGAGGTCAAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTKPWFP*KRSKAG
Trigger: TCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATAAGAATGACTCCACTTaGATTATCCTCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYKNDST*IILLQS
Trigger: ACTTTGCAAGAGGATAATCCAAGTGGAGTCATTCTT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACTTCCACCATGTGTCTaGTTCCCGAAAAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLPPCV*FPKKDF
Trigger: AAAGTCCTTTTTCGGGAACCAGACACATGGTGGAAG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp AGAATCTTCCGGGTAGTTACTTTCCAAAGCCAATGTGTTATCCTTTATAAAACAGGAGATCCTCGTTGCTaGACACAATCTGTATTCACA +
Preference number: 4 (lower is better)
Translates to: RIFRVVTFQSQCVILYKTGDPRC*TQSVFT
Trigger: TGTGAATACAGATTGTGTCCAGCAACGAGGATCTCC...TGTTTTATAAAGGATAACACATTGGCTTTGGAAAGTAACTACCCGGAAGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGGAGATCCTCGTTGCTaGACACAATCTGTATTCACA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTGDPRC*TQSVFT
Trigger: TGTGAATACAGATTGTGTCCAGCAACGAGGATCTCC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGCAGAACTTCCTAGATTaGAGCTACCCAATGTCTTTA +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMQNFLD*SYPMSL
Trigger: TAAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTG...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTACTCCAGAAACAGTTaGTGCACTATTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYYSRNS*CTIGKS
Trigger: ACTTTTACCAATAGTGCACCAACTGTTTCTGGAGTA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAAGAGCAAAATCCTGTaGTTCAGTCTGGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTKSKIL*FSLGAH
Trigger: ATGTGCACCCAGACTGAACCACAGGATTTTGCTCTT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACTAATACCAATCCCATaGCTAAACTCTGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLIPIP*LNSGTG
Trigger: TCCTGTGCCAGAGTTTAGCCATGGGATTGGTATTAG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCTTGTCATCGATTCATaGTTTTCAGGAGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILVIDS*FSGVTA
Trigger: AGCTGTCACTCCTGAAAACCATGAATCGATGACAAG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCAGATTTGGCCATCGCTaGAGTGGGATTCAATATCTC +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTRFGHR*SGIQYL
Trigger: GAGATATTGAATCCCACTCCAGCGATGGCCAAATCT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAGATTTGGCCATCGCTaGAGTGGGATTCAATATCTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTRFGHR*SGIQYL
Trigger: GAGATATTGAATCCCACTCCAGCGATGGCCAAATCT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCTCAAAGATCTCTATaGCAGCAAGGTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISQRSL*QQGDWL
Trigger: AAGCCAATCACCTTGCTGCCATAGAGATCTTTGAGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGGTACTTAATGACAGCTaGTTTGATGCGAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWVLNDS*FDASNS
Trigger: GGAGTTGCTCGCATCAAACCAGCTGTCATTAAGTAC...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 72 bp TTTACAGCCACCATTTCTATTTGCTCGTTTTCACTTTaGTCTGTTGCCTGTAGTTTGCTTTCAGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FTATISICSFSL*SVACSLLSESE
Trigger: TTCTGACTCTGAAAGCAAACTACAGGCAACAGACAAAAGTGAAAACGAGCAAATAGAAATGGTGGCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTGATTCTTCTCTTCAGTaGACTCTAGATGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SIELSVSVLLYPFTATISDSSLQ*TLDASK
Trigger: CTTTGAAGCATCTAGAGTTCACTGAAGAGAAGAATC...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGATTCTTCTCTTCAGTaGACTCTAGATGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIDSSLQ*TLDASK
Trigger: CTTTGAAGCATCTAGAGTTCACTGAAGAGAAGAATC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAACAGCAAGTACTAGGTaGTACTCTCTCCATAGAACT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTTASTR*YSLHRT
Trigger: AGTTCTATGGAGAGAGTATCACCTAGTACTTGCTGT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGATCTGTGTTCCCTCTaGGCTAAAGAATCAGATGAA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTDLCSL*AKESDE
Trigger: TTCATCTGATTCTTTAGCTCAGAGGGAACACAGATC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTAGGCATTTGCTCTTaGCATTCAGCTAACGTTTGT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILGICS*HSANVC
Trigger: ACAAACGTTAGCTGAATGTCAAGAGCAAATGCCTAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAAAAGGCCCAATTTGTaGTCCATCACACGATTTTTG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIKRPNL*SITRFL
Trigger: CAAAAATCGTGTGATGGATCACAAATTGGGCCTTTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGATCACAAGTAGACTGTaGGTCAGCGTTACTAATACC +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWITSRL*VSVTNT
Trigger: GGTATTAGTAACGCTGACTCACAGTCTACTTGTGAT...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAATCACAAGTAGACTGTaGGTCAGCGTTACTAATACC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTITSRL*VSVTNT
Trigger: GGTATTAGTAACGCTGACTCACAGTCTACTTGTGAT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCTTTCCATTTCTCATaGATCACTTTCGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISFHFS*ITFARF
Trigger: GAATCTGGCGAAAGTGATTCATGAGAAATGGAAAGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTTCTTTCCATTTCTCATaGATCACTTTCGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFSFHFS*ITFARF
Trigger: GAATCTGGCGAAAGTGATTCATGAGAAATGGAAAGA...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGACTTCTGGCCAGTATaGGATGTGACATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTDFWPV*DVTFSF
Trigger: AAATGAGAATGTCACATCTCATACTGGCCAGAAGTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATATGAATGTTACGCCTTaGAAGTTCCTTTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYMNVTP*KFLWFK
Trigger: TTTAAACCAAAGGAACTTGCAAGGCGTAACATTCAT...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTAAGTGGTCCACTATTTaGAAGATCACAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFKWSTI*KITVFL
Trigger: CAAGAAGACTGTGATCTTGCAAATAGTGGACCACTT...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAAGTGGTCCACTATTTaGAAGATCACAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIKWSTI*KITVFL
Trigger: CAAGAAGACTGTGATCTTGCAAATAGTGGACCACTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCACACTGTGACTTTCTaGCATCCTCTACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTHTVTF*HPLHFH
Trigger: ATGAAAGTGTAGAGGATGGCAGAAAGTCACAGTGTG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTTCAGGATGTTTGTGTaGCTTGAAGTTGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTFRMFV*LEVEPF
Trigger: GAAGGGTTCAACTTCAAGCCACACAAACATCCTGAA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCTTTTGCACGATTCTaGTTCCATTCATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISFARF*FHSCAS
Trigger: AGAAGCACATGAATGGAACCAGAATCGTGCAAAAGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTCCTTGCAAGTTCCTTTaGTTTAAACTTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFPCKFL*FKLPPC
Trigger: ACATGGTGGAAGTTTAAACCAAAGGAACTTGCAAGG...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTCCAATTTCTAGGTTaGGCTCACTTAAACCAGTCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIFQFLG*AHLNQS
Trigger: AGACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCAGAACTTCCTAGATTaGAGCTACCCAATGTCTTTA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIQNFLD*SYPMSL
Trigger: TAAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTAGTCATCATAGTCTaGGTACTCAAAGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVVIIV*VLKVLE
Trigger: TTCCAGGACTTTGAGTACCCAGACTATGATGACTAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTCTCAAAGATCTCTATaGCAGCAAGGTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWSQRSL*QQGDWL
Trigger: AAGCCAATCACCTTGCTGCCATAGAGATCTTTGAGA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGACTTTCAAGCACCCTaGTTTAATTTCAGAGAACCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIDFQAP*FNFREP
Trigger: AGGTTCTCTGAAATTAAACCAGGGTGCTTGAAAGTC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
3UTR CAA 72 bp CTTTCTTACAACCTGAGAAACTGGGGTTTCTTGTACTaGATAAGCACTTGTTCCATCTTTATTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LSYNLRNWGFLY*ISTCSIFISPY
Trigger: GTATGGAGAAATAAAGATGGAACAAGTGCTTATCAAGTACAAGAAACCCCAGTTTCTCAGGTTGTAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTACTTAGACAAGTCTaGCTCTCACAGGTCATTTCA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLLRQV*LSQVIS
Trigger: TGAAATGACCTGTGAGAGTCAGACTTGTCTAAGTAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGATGTGTGTTGCCCATaGCTCTTTTTACTTAGACAA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTDVCCP*LFLLRQ
Trigger: TTGTCTAAGTAAAAAGAGTCATGGGCAACACACATC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAAAAGGCCCAATTTGTaGTCCATCACACGATTTTTG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTKRPNL*SITRFL
Trigger: CAAAAATCGTGTGATGGATCACAAATTGGGCCTTTT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTTTTGCCTGTTCTCTaGGATGATTTTTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIFLPVL*DDFCSG
Trigger: TCCTGAACAAAAATCATCTCAGAGAACAGGCAAAAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTATTTTACTTTAGCATaGCTTTCAAGCACCCTGGTT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIYFTLA*LSSTLV
Trigger: AACCAGGGTGCTTGAAAGTCATGCTAAAGTAAAATA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAATGACAGCTTCCTTTaGGAAAGTTGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTNDSFL*ESWLFF
Trigger: GAAAAAGAGCCAACTTTCTCAAAGGAAGCTGTCATT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCAATGACAGCTTCCTTTaGGAAAGTTGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTNDSFL*ESWLFF
Trigger: GAAAAAGAGCCAACTTTCTCAAAGGAAGCTGTCATT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCAACTTCCTTAGGGTTTaGAGTCTTCCGAAAAGGATT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTNFLRV*SLPKRI
Trigger: AATCCTTTTCGGAAGACTGCAAACCCTAAGGAAGTT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAGGTCTTCAGTTAGCTaGATGTCCAAAAATGAATCC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTRSSVS*MSKNES
Trigger: GGATTCATTTTTGGACATGCAGCTAACTGAAGACCT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACTCAAATGCTTCTTTTaGACGATTCTGGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLKCFF*TILVPF
Trigger: GAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTATCCTCACAAGAATATaGACACAACTCAATACGTTC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIILTRI*TQLNTF
Trigger: GAACGTATTGAGTTGTGTGCATATTCTTGTGAGGAT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGCCACCATTTCTATTTaGTCGTTTTCACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIATISI*SFSLLS
Trigger: AGACAAAAGTGAAAACGAGCAAATAGAAATGGTGGC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCAAGTGGTCCACTATTTaGAAGATCACAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTKWSTI*KITVFL
Trigger: CAAGAAGACTGTGATCTTGCAAATAGTGGACCACTT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCCAGAAACAGTTGGTaGACTATTGGTAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISRNSW*TIGKSK
Trigger: CTTACTTTTACCAATAGTGCACCAACTGTTTCTGGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTATTTTCAGATTCATCTaGACTGGTAAGCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIIFRFI*TGKLTF
Trigger: GAAAGTGAGCTTACCAGTGCAGATGAATCTGAAAAT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTACAACCTGAGAAACTaGGGTTTCTTGTACTTGATA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIYNLRN*GFLYLI
Trigger: TATCAAGTACAAGAAACCCCAGTTTCTCAGGTTGTA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCCTTGCAAGTTCCTTTaGTTTAAACTTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTPCKFL*FKLPPC
Trigger: ACATGGTGGAAGTTTAAACCAAAGGAACTTGCAAGG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACCTTGCAAGTTCCTTTaGTTTAAACTTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTPCKFL*FKLPPC
Trigger: ACATGGTGGAAGTTTAAACCAAAGGAACTTGCAAGG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGAATAGTCTTATCAACTaGCCAGTCACCAACAAAATT +
Preference number: 4 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMNSLIN*PVTNKI
Trigger: AATTTTGTTGGTGACTGGCCAGTTGATAAGACTATT...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTTCCAATTTCTAGGTTaGGCTCACTTAAACCAGTCT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTFQFLG*AHLNQS
Trigger: AGACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACAGAACTTCCTAGATTaGAGCTACCCAATGTCTTTA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTQNFLD*SYPMSL
Trigger: TAAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGAAAGACAGTTCACTTaGTGTTTCTTCAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIERQFT*CFFSLF
Trigger: AAAGAGACTGAAGAAACACCAAGTGAACTGTCTTTC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGAGAACCTGAAGCTATaGCTTATGAGGTACTTAATG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTENLKL*LMRYLM
Trigger: CATTAAGTACCTCATAAGCCATAGCTTCAGGTTCTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGACTTTCAAGCACCCTaGTTTAATTTCAGAGAACCT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTDFQAP*FNFREP
Trigger: AGGTTCTCTGAAATTAAACCAGGGTGCTTGAAAGTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTTCTCCTTGGCATTCTaGCTTCCAAAACTAAAATGT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTFSLAF*LPKLKC
Trigger: ACATTTTAGTTTTGGAAGTCAGAATGCCAAGGAGAA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGAGGATTTTTCATTTTaGAGTGGTCCACTATTTGCA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTEDFSF*SGPLFA
Trigger: TGCAAATAGTGGACCACTTCAAAATGAAAAATCCTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACACTATTTCACCAGGTaGGGATTTTTCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTHYFTR*GFFILK
Trigger: CTTCAAAATGAAAAATCCTCACCTGGTGAAATAGTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACATATTTATAGCTATTaGGTGGCTCTGAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTHIYSY*VALKHH
Trigger: ATGATGCTTCAGAGCCACTCAATAGCTATAAATATG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR TCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTTTTTGCCTGTTCTCTaGGATGATTTTTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTFLPVL*DDFCSG
Trigger: TCCTGAACAAAAATCATCTCAGAGAACAGGCAAAAA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTATCTTCTTCTCAAATaGTTCTTTTGCACGATTCTG +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIYLLLK*FFCTIL
Trigger: CAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTATGAATGTTACGCCTTaGAAGTTCCTTTGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIMNVTP*KFLWFK
Trigger: TTTAAACCAAAGGAACTTGCAAGGCGTAACATTCAT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAATCCTCACAAGAATATaGACACAACTCAATACGTTC +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTILTRI*TQLNTF
Trigger: GAACGTATTGAGTTGTGTGCATATTCTTGTGAGGAT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCTGTTGCCTGTAGTTTaGTTTCAGAGTCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTLLPVV*FQSQKN
Trigger: ATTTTTCTGACTCTGAAAGCAAACTACAGGCAACAG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACTGTTGCCTGTAGTTTaGTTTCAGAGTCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLLPVV*FQSQKN
Trigger: ATTTTTCTGACTCTGAAAGCAAACTACAGGCAACAG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTATACCTGGAAAGGACTaGTTACTGCTATATAAAAGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFIPGKD*LLLYKS
Trigger: ACTTTTATATAGCAGTAAGCAGTCCTTTCCAGGTAT...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp AGAATCTTCCGGGTAGTTACTTTCCAAAGCCAATGTGTTATCCTTTATAAAACACAAACTTCACCTCATTaGACAATGGAAAAGCACTTA +
Preference number: 4 (lower is better)
Translates to: RIFRVVTFQSQCVILYKTQTSPH*TMEKHL
Trigger: TAAGTGCTTTTCCATTGTGCAATGAGGTGAAGTTTG...TGTTTTATAAAGGATAACACATTGGCTTTGGAAAGTAACTACCCGGAAGATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTACAACCTGAGAAACTaGGGTTTCTTGTACTTGATA +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTYNLRN*GFLYLI
Trigger: TATCAAGTACAAGAAACCCCAGTTTCTCAGGTTGTA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAAGAATGACTCCACTTaGATTATCCTCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTKNDST*IILLQS
Trigger: ACTTTGCAAGAGGATAATCCAAGTGGAGTCATTCTT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTACGTTCAATTTTCTCTaGAACCGAAGAACTCATAAT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDITFNFL*NRRTHN
Trigger: ATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAATAGTCTTATCAACTaGCCAGTCACCAACAAAATT +
Preference number: 4 (lower is better)
Translates to: YTDSSRSISIRQQHLEDINSLIN*PVTNKI
Trigger: AATTTTGTTGGTGACTGGCCAGTTGATAAGACTATT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATACTCCAGAAACAGTTaGTGCACTATTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTYSRNS*CTIGKS
Trigger: ACTTTTACCAATAGTGCACCAACTGTTTCTGGAGTA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCGTTACTGTTGCTCTTTCTTCCACTATTTCACCAGGTGAGGATTTTTCATTTTCCATCACACGATTTTTaGAAATTCTCAAACTCTGTA +
Preference number: 4 (lower is better)
Translates to: SLLLLFLPLFHQVRIFHFPSHDF*KFSNSV
Trigger: TACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGG...AAAATGAAAAATCCTCACCTGGTGAAATAGTGGAAGAAAGAGCAACAGTAACGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTAGTCATCATAGTCTaGGTACTCAAAGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVVIIV*VLKVLF
Trigger: AAAAAGGACTTTGAGTACCCAGACTATGATGACTAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513269.1
3UTR CAA 72 bp GAAGCAACGAAACTTTGTGAAGATGATTCTTCTATCTaGGTATCAGTGGCAGATAATTCTAATAGACAATCC +
Preference number: 4 (lower is better)
Translates to: EATKLCEDDSSI*VSVADNSNRQS
Trigger: GGATTGTCTATTAGAATTATCTGCCACTGATACCAAGATAGAAGAATCATCTTCACAAAGTTTCGTTGCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
3UTR CAA 72 bp GAGAGATATGCAACATTCTCAGGTAACATTGTTTCTTaGGTTACATCAAGATTCTTCTCTTCAGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: ERYATFSGNIVS*VTSRFFSSVNS
Trigger: AGAGTTCACTGAAGAGAAGAATCTTGATGTAACCAAAGAAACAATGTTACCTGAGAATGTTGCATATCTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATATCTTCTTCTCAAATaGTTCTTTTGCACGATTCTG +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTYLLLK*FFCTIL
Trigger: CAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR GCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAATACCTGGAAAGGACTaGTTACTGCTATATAAAAGT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTIPGKD*LLLYKS
Trigger: ACTTTTATATAGCAGTAAGCAGTCCTTTCCAGGTAT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAACGTTCAATTTTCTCTaGAACCGAAGAACTCATAAT +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTTFNFL*NRRTHN
Trigger: ATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp AGAATCTTCCGGGTAGTTACTTTCCAAAGCCAATGTGTTATCCTTTATAAAACAACGTTCAATTTTCTCTaGAACCGAAGAACTCATAAT +
Preference number: 4 (lower is better)
Translates to: RIFRVVTFQSQCVILYKTTFNFL*NRRTHN
Trigger: ATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGT...TGTTTTATAAAGGATAACACATTGGCTTTGGAAAGTAACTACCCGGAAGATTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACCATCACACGATTTTTaGAAATTCTCAAACTCTGTA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTPSHDF*KFSNSV
Trigger: TACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTATAAAAGTTCTTCCTaGCTGTTAGGAAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTYKSSS*LLGSMS
Trigger: TGACATACTTCCTAACAGCCAGGAAGAACTTTTATA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CCA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATATAAAAGTTCTTCCTaGCTGTTAGGAAGTATGTCA +
Preference number: 4 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTYKSSS*LLGSMS
Trigger: TGACATACTTCCTAACAGCCAGGAAGAACTTTTATA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CCA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCACTTTAGGATTCTTTTaGTACCAGCTCAATCCTATA +
Preference number: 4 (lower is better)
Translates to: SPSPKANLSHCLILENYTTLGFF*YQLNPI
Trigger: TATAGGATTGAGCTGGTACCAAAAGAATCCTAAAGT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS GCA 90 bp CGGCGCCACTGCGCTCTCCCGCGCCGCGCAAGGCTAGCAAGCAGCTaGGGCCGCGGGGGAGACACGGCGAGCGCGCCCGGCGGGGAGACA +
Preference number: 5 (lower is better)
Translates to: RRHCALPRRARLASS*GRGGDTASAPGGET
Trigger: TGTCTCCCCGCCGGGCGCGCTCGCCGTGTCTCCCCCGCGGCCGCAGCTGCTTGCTAGCCTTGCGCGGCGCGGGAGAGCGCAGTGGCGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261435.11
CDS GCA 90 bp ACAACGCGGCGCCGCAGGTCCGCAGCCCTTTCCCGCCGGCGCCACTaGGCTCTCCCGCGCCGCGCAAGGCTAGCAAGCAGCTGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: TTRRRRSAALSRRRH*ALPRRARLASSCGR
Trigger: GCGGCCGCAGCTGCTTGCTAGCCTTGCGCGGCGCGGGAGAGCGCAGTGGCGCCGGCGGGAAAGGGCTGCGGACCTGCGGCGCCGCGTTGT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261435.11
CDS GCA 90 bp TGTCTTCTTACTGCTTCTGGAGCGGGCAGAGGGCGTCGAAGCCGGTaGCGCGTCGTCGAACGCACAACGCGGCGCCGCAGGTCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: CLLTASGAGRGRRSR*RVVERTTRRRRSAA
Trigger: GGCTGCGGACCTGCGGCGCCGCGTTGTGCGTTCGACGACGCGGCACCGGCTTCGACGCCCTCTGCCCGCTCCAGAAGCAGTAAGAAGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000515550.1
CDS-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTCTCCATCCTCTTCTGTaGGTGAAGGAAAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFLHPLL*VKESLC
Trigger: GCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAG...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TACCGGGCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGCTCCATCCTCTTCTGTaGGTGAAGGAAAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: YRAVTHILPLSWQFRMFVLHPLL*VKESLC
Trigger: GCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAG...CACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATTGTGTGGCTTGAAGTaGAACCCTTCGGAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPLCGLK*NPSEGR
Trigger: TCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCACAAAAGCAGGAATCATaGGATTCCACATCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPQKQES*DSTSVE
Trigger: CTCCACCGATGTGGAATCCAATGATTCCTGCTTTTG...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTTAGTTTTTGAGAGCTaGTGCCCCAACAGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFLVFES*CPNRPH
Trigger: ATGAGGCCTGTTGGGGCACAAGCTCTCAAAAACTAA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTCTATGGTCAGAGATTaGGCCATCGCTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHSMVRD*AIAGVG
Trigger: TCCCACTCCAGCGATGGCCAAATCTCTGACCATAGA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCAGGCAGCAGCGAAGCATaGACTTTCTCAAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPGSSEA*TFSKIS
Trigger: AGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGCC...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTTAATGACAGCTGGTTaGATGCGAGCAACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHLMTAG*MRATPP
Trigger: GGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCACTGCGATGGAGTCACTaGCTACATTTAAAGAACTAC +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPLRWSH*LHLKNY
Trigger: GTAGTTCTTTAAATGTAGCAAGTGACTCCATCGCAG...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGAGGAGCTTCAGAGAATaGAGCCTCAACGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMRSFRE*SLNALR
Trigger: TCTGAGTGCGTTGAGGCTCAATTCTCTGAAGCTCCT...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGGCAGTTCAGGATGTTaGTGTGGCTTGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHGSSGC*CGLKLN
Trigger: GTTCAACTTCAAGCCACACAAACATCCTGAACTGCC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAAAGCCATGGTTTCCTaGGAAGAGGTCAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHKAMVS*EEVKSR
Trigger: CCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTT...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTTGATAGCTCATGTCTaGGGAACTTTTCCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFLIAHV*GTFPKS
Trigger: CGACTTTGGAAAAGTTCCCAAGACATGAGCTATCAA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGAGGTGGCGTTGGTGAACAAACTCTaGGGCTACAACTGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: LGRGQKQESLDSTSVEVALVNKL*GYNCFY
Trigger: GTAAAAACAGTTGTAGCCCAAGAGTTTGTTCACCAA...CGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTGTGACATTCTCATTTaGGTGAACAAACTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFCDILI*VNKLLG
Trigger: GCCCAAGAGTTTGTTCACCAAAATGAGAATGTCACA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGGGGTGGGAGGCAATTaGGAATTAAGCAGCTTCATA +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHGVGGN*ELSSFI
Trigger: TATGAAGCTGCTTAATTCCAAATTGCCTCCCACCCC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCACATCGGTGGAGGTGGCGTCATTAAGGCCACAGTaGATATATGCAAACTCTACA +
Preference number: 5 (lower is better)
Translates to: LGRGQKQESLDSTSVEVASLRPQ*IYANST
Trigger: TGTAGAGTTTGCATATATCAACTGTGGCCTTAATGA...CGCCACCTCCACCGATGTGGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATCTTCCTGATCAACTTTaGTCTCACCCATGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHLPDQL*SHPWKV
Trigger: TACCTTCCATGGGTGAGACAAAAGTTGATCAGGAAG...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCAAAGCCATGGTTTCCTaGGAAGAGGTCAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSKAMVS*EEVKSR
Trigger: CCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTT...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TACCGGGCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGAGAAACTGGGGTTTCTaGTACTTGATAAGCACTTGT +
Preference number: 5 (lower is better)
Translates to: YRAVTHILPLSWQFRMFVRNWGF*YLISTC
Trigger: ACAAGTGCTTATCAAGTACAAGAAACCCCAGTTTCT...CACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGCCCGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATCTCAAATGCTTCTTTaGCACGATTCTGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPSQMLL*HDSGSI
Trigger: AATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGCAGTCTTTGGCATTCTaGATCTGTGTTCCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMQSLAF*ICVPSE
Trigger: CTCAGAGGGAACACAGATCAAGAATGCCAAAGACTG...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTCACTTAAACCAGTCTTaGGCATTCTTGATCTGTGTT +
Preference number: 5 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFHLNQS*AFLICV
Trigger: AACACAGATCAAGAATGCCAAAGACTGGTTTAAGTG...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATATTTCTCCATACTTTaGTTGGGGAAGTGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPYFSIL*LGKCEK
Trigger: TTTCTCACACTTCCCCAACAAAAGTATGGAGAAATA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp GCAGTAACTCACATCCTTCCCCTTAGTTGGCAGTTCAGGATGTTTGTGTGGCTTACTTGGATTATCCTCTaGCAAAGTCCTTGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: AVTHILPLSWQFRMFVWLTWIIL*QSPCQK
Trigger: TTTTTGGCAAGGACTTTGCAAGAGGATAATCCAAGT...AAGCCACACAAACATCCTGAACTGCCAACTAAGGGGAAGGATGTGAGTTACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTGCTCGTTTTCACTTTaGTCTGTTGCCTGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHCSFSL*SVACSL
Trigger: CAAACTACAGGCAACAGACAAAAGTGAAAACGAGCA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGAAGTGGTCCACTATTaGCAAGATCACAGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHEVVHY*QDHSLL
Trigger: AAGAAGACTGTGATCTTGCAAATAGTGGACCACTTC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTGAAGTGGTCCACTATTaGCAAGATCACAGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTEVVHY*QDHSLL
Trigger: AAGAAGACTGTGATCTTGCAAATAGTGGACCACTTC...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCATGTGGAGATCCTCGTaGCTGGACACAATCTGTATT +
Preference number: 5 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSMWRSS*LDTICI
Trigger: AATACAGATTGTGTCCAGCAACGAGGATCTCCACAT...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGTTCCAATTTCTAGGTaGGGCTCACTTAAACCAGTC +
Preference number: 5 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMVPISR*GSLKPV
Trigger: GACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAAC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp ATATCTCCCTGGTCCAACTGGACACCCTCTGGGGTTTCCACATTAGTCCTCTTTTCCATCACACGATTTTaGGAAATTCTCAAACTCTGT +
Preference number: 5 (lower is better)
Translates to: ISPWSNWTPSGVSTLVLFSITRF*EILKLC
Trigger: ACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGGA...AAAGAGGACTAATGTGGAAACCCCAGAGGGTGTCCAGTTGGACCAGGGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CCAGTTCAGGGGGTAATGCCAATTCCAGACAGTCTATGGTCAGAGATTTGGCCATCCATCACACGATTTTaGGAAATTCTCAAACTCTGT +
Preference number: 5 (lower is better)
Translates to: PVQGVMPIPDSLWSEIWPSITRF*EILKLC
Trigger: ACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGGA...TGGCCAAATCTCTGACCATAGACTGTCTGGAATTGGCATTACCCCCTGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGGAAGGAGAATGTATGTaGTCTCCAGTCTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMEGECM*SPVSVT
Trigger: AGTCACAGAGACTGGAGACAACATACATTCTCCTTC...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTTCTGCTGCACCTACTaGGTTCTCAGAAGCAACGAA +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYFCCTY*VLRSNE
Trigger: TTCGTTGCTTCTGAGAACCAAGTAGGTGCAGCAGAA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATCAAAAGCAGGAATCATaGGATTCCACATCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYQKQES*DSTSVE
Trigger: CTCCACCGATGTGGAATCCAATGATTCCTGCTTTTG...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATTCTCAAATGCTTCTTTaGCACGATTCTGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHSQMLL*HDSGSI
Trigger: AATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGA...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCTTGATAGCTCATGTCTaGGGAACTTTTCCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSLIAHV*GTFPKS
Trigger: CGACTTTGGAAAAGTTCCCAAGACATGAGCTATCAA...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTAGTCACCAACAAAATTaGATAGCTCATGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTSHQQN*IAHVLG
Trigger: TCCCAAGACATGAGCTATCAAATTTTGTTGGTGACT...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCTATGGTCAGAGATTaGGCCATCGCTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISMVRD*AIAGVG
Trigger: TCCCACTCCAGCGATGGCCAAATCTCTGACCATAGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp CTACAAAGCCATGGTTTCCTTGGAAGAGGTCAAAAGCAGGAATCATTGGATTCCAACCAAGGAAGGATCTaGCATAAACTTGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: LQSHGFLGRGQKQESLDSNQGRI*HKLATR
Trigger: TCTTGTGGCAAGTTTATGCAAGATCCTTCCTTGGTT...GGAATCCAATGATTCCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CTTCTGCCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATGATGATTCTTCTATCTaGGTATCAGTGGCAGATAAT +
Preference number: 5 (lower is better)
Translates to: LLPTEYHTSTSDCSFINHDDSSI*VSVADN
Trigger: ATTATCTGCCACTGATACCAAGATAGAAGAATCATC...ATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCTATGGTCAGAGATTaGGCCATCGCTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSMVRD*AIAGVG
Trigger: TCCCACTCCAGCGATGGCCAAATCTCTGACCATAGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACTCCATCCTCTTCTGTaGGTGAAGGAAAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLHPLL*VKESLC
Trigger: GCAGAGGCTTTCCTTCACCAACAGAAGAGGATGGAG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTAATGACAGCTGGTTaGATGCGAGCAACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILMTAG*MRATPP
Trigger: GGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TTGGCCATCGCTGGAGTGGGATTCAATATCTCGGTTTTATCTTCCCCACTAACTTACTTTAGGATTCTTTaGGTACCAGCTCAATCCTAT +
Preference number: 5 (lower is better)
Translates to: LAIAGVGFNISVLSSPLTYFRIL*VPAQSY
Trigger: ATAGGATTGAGCTGGTACCAAAAGAATCCTAAAGTA...AGTTAGTGGGGAAGATAAAACCGAGATATTGAATCCCACTCCAGCGATGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGGGGGTGGGAGGCAATTaGGAATTAAGCAGCTTCATA +
Preference number: 5 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMGVGGN*ELSSFI
Trigger: TATGAAGCTGCTTAATTCCAAATTGCCTCCCACCCC...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGCACAAATATACAGGTaGAGTGAGTATCCCCTACTC +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYAQIYR*SEYPLL
Trigger: GAGTAGGGGATACTCACTCAACCTGTATATTTGTGC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS TCA 90 bp ACACTACATCAGGATCCAGATCAGAAAATATCTCTGAGATACTGGTaGAGAGTTCTTCCTGATCAACTTTTGTCTCACCCATGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: TLHQDPDQKISLRYW*RVLPDQLLSHPWKV
Trigger: TACCTTCCATGGGTGAGACAAAAGTTGATCAGGAAGAACTCTTCACCAGTATCTCAGAGATATTTTCTGATCTGGATCCTGATGTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS TCA 90 bp GTGCACAAGAACTGGCACCTAGTAAGCACCCAATTAAGTTCCCTTTaGAATCACATTCAGAAAGCATCAAATACACTACATCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: VHKNWHLVSTQLSSL*NHIQKASNTLHQDP
Trigger: TGGATCCTGATGTAGTGTATTTGATGCTTTCTGAATGTGATTTCAAAGGGAACTTAATTGGGTGCTTACTAGGTGCCAGTTCTTGTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGCTTCCTGATCAACTTTaGTCTCACCCATGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMLPDQL*SHPWKV
Trigger: TACCTTCCATGGGTGAGACAAAAGTTGATCAGGAAG...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAGGAGCTTCAGAGAATaGAGCCTCAACGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTRSFRE*SLNALR
Trigger: TCTGAGTGCGTTGAGGCTCAATTCTCTGAAGCTCCT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGGATGTTTGTGTGGCTaGAAGTTGAACCCTTCGGAA +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIGCLCG*KLNPSE
Trigger: TTCCGAAGGGTTCAACTTCAAGCCACACAAACATCC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCAAAAGCAGGAATCATaGGATTCCACATCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIQKQES*DSTSVE
Trigger: CTCCACCGATGTGGAATCCAATGATTCCTGCTTTTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAAAGCCATGGTTTCCTaGGAAGAGGTCAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIKAMVS*EEVKSR
Trigger: CCTGCTTTTGACCTCTTCCAAGGAAACCATGGCTTT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTGGGGTTTCTTGTACTaGATAAGCACTTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYWGFLY*ISTCSI
Trigger: GATGGAACAAGTGCTTATCAAGTACAAGAAACCCCA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTGCTCGTTTTCACTTTaGTCTGTTGCCTGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYCSFSL*SVACSL
Trigger: CAAACTACAGGCAACAGACAAAAGTGAAAACGAGCA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCAGTCTTTGGCATTCTaGATCTGTGTTCCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIQSLAF*ICVPSE
Trigger: CTCAGAGGGAACACAGATCAAGAATGCCAAAGACTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTTAATGACAGCTGGTTaGATGCGAGCAACTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWLMTAG*MRATPP
Trigger: GGGAGGAGTTGCTCGCATCAAACCAGCTGTCATTAA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp AACAGTTGGTGCACTATTGGTAAAAGTAAGAGGCAACGATGTGTGTTGCCCATGCCAATTAAGTTCCCTTaGAAATCACATTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: NSWCTIGKSKRQRCVLPMPIKFP*KSHSES
Trigger: GCTTTCTGAATGTGATTTCAAAGGGAACTTAATTGG...CATGGGCAACACACATCGTTGCCTCTTACTTTTACCAATAGTGCACCAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS GCA 90 bp AGCATCGATGCTGTCAACATGCTCATTAAGGCCACAGTTGATATATaGAAACTCTACACCTCTTCTTGTTATCCAACATGTCTTCTTACT +
Preference number: 5 (lower is better)
Translates to: SIDAVNMLIKATVDI*KLYTSSCYPTCLLT
Trigger: AGTAAGAAGACATGTTGGATAACAAGAAGAGGTGTAGAGTTTGCATATATCAACTGTGGCCTTAATGAGCATGTTGACAGCATCGATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000515550.1
CDS GCA 90 bp ATCCATAGCATTTTCAATGTCTGTCTAGCATCGATGCTGTCAACATaGTCATTAAGGCCACAGTTGATATATGCAAACTCTACACCTCTT +
Preference number: 5 (lower is better)
Translates to: IHSIFNVCLASMLST*SLRPQLIYANSTPL
Trigger: AAGAGGTGTAGAGTTTGCATATATCAACTGTGGCCTTAATGAGCATGTTGACAGCATCGATGCTAGACAGACATTGAAAATGCTATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515550.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTCTGCTGCACCTACTaGGTTCTCAGAAGCAACGAA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTFCCTY*VLRSNE
Trigger: TTCGTTGCTTCTGAGAACCAAGTAGGTGCAGCAGAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTGTGTGGCTTGAAGTaGAACCCTTCGGAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLCGLK*NPSEGR
Trigger: TCTACCTTCCGAAGGGTTCAACTTCAAGCCACACAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGGCAGTTCAGGATGTTaGTGTGGCTTGAAGTTGAAC +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTGSSGC*CGLKLN
Trigger: GTTCAACTTCAAGCCACACAAACATCCTGAACTGCC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTATGTGGAGATCCTCGTaGCTGGACACAATCTGTATT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIMWRSS*LDTICI
Trigger: AATACAGATTGTGTCCAGCAACGAGGATCTCCACAT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACAGTCTTTGGCATTCTaGATCTGTGTTCCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTQSLAF*ICVPSE
Trigger: CTCAGAGGGAACACAGATCAAGAATGCCAAAGACTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTTCCAATTTCTAGGTaGGGCTCACTTAAACCAGTC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVPISR*GSLKPV
Trigger: GACTGGTTTAAGTGAGCCCAACCTAGAAATTGGAAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTAGTTTTTGAGAGCTaGTGCCCCAACAGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLVFES*CPNRPH
Trigger: ATGAGGCCTGTTGGGGCACAAGCTCTCAAAAACTAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAGGCAACGATGTGTGTaGCCCATGACTCTTTTTACT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIRQRCV*PMTLFT
Trigger: AGTAAAAAGAGTCATGGGCAACACACATCGTTGCCT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCACCTCTTCTTGTCTTaGTCGCTCCATTACAGATTC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIHLFLS*SLHYRF
Trigger: GAATCTGTAATGGAGCGACAAAGACAAGAAGAGGTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTACAAGACACCTCTTCTaGTCTTTGTCGCTCCATTAC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDITRHLF*SLSLHY
Trigger: GTAATGGAGCGACAAAGACAAGAAGAGGTGTCTTGT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGGATCTTGCATAAACTaGCCACAAGACACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIGSCIN*PQDTSS
Trigger: AGAAGAGGTGTCTTGTGGCAAGTTTATGCAAGATCC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGGGAAAGACAGTTCACTaGGTGTTTCTTCAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMGKTVH*VFLQSL
Trigger: AAGAGACTGAAGAAACACCAAGTGAACTGTCTTTCC...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGGCAGCAGCGAAGCATaGACTTTCTCAAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTGSSEA*TFSKIS
Trigger: AGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGCC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGGCAGCAGCGAAGCATaGACTTTCTCAAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTGSSEA*TFSKIS
Trigger: AGAGATCTTTGAGAAAGTCAATGCTTCGCTGCTGCC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TCCATAGAACTATCTGTGTCAGTTTTACTATACCCTTTTACAGCCACCATTTCTGCACAAATATACAGGTaGAGTGAGTATCCCCTACTC +
Preference number: 5 (lower is better)
Translates to: SIELSVSVLLYPFTATISAQIYR*SEYPLL
Trigger: GAGTAGGGGATACTCACTCAACCTGTATATTTGTGC...AGAAATGGTGGCTGTAAAAGGGTATAGTAAAACTGACACAGATAGTTCTATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS TCA 90 bp AAGCATCAAATACACTACATCAGGATCCAGATCAGAAAATATCTCTaGGATACTGGTGAAGAGTTCTTCCTGATCAACTTTTGTCTCACC +
Preference number: 5 (lower is better)
Translates to: KHQIHYIRIQIRKYL*DTGEEFFLINFCLT
Trigger: GGTGAGACAAAAGTTGATCAGGAAGAACTCTTCACCAGTATCTCAGAGATATTTTCTGATCTGGATCCTGATGTAGTGTATTTGATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCTGCGATGGAGTCACTaGCTACATTTAAAGAACTAC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILRWSH*LHLKNY
Trigger: GTAGTTCTTTAAATGTAGCAAGTGACTCCATCGCAG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTGGGGTTTCTTGTACTaGATAAGCACTTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIWGFLY*ISTCSI
Trigger: GATGGAACAAGTGCTTATCAAGTACAAGAAACCCCA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTGATAGCTCATGTCTaGGGAACTTTTCCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILIAHV*GTFPKS
Trigger: CGACTTTGGAAAAGTTCCCAAGACATGAGCTATCAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCATGTGGAGATCCTCGTaGCTGGACACAATCTGTATT +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTMWRSS*LDTICI
Trigger: AATACAGATTGTGTCCAGCAACGAGGATCTCCACAT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCAGAACTTCCTAGATaGGAGCTACCCAATGTCTTT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISELPR*ELPNVF
Trigger: AAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCAGGCAACGATGTGTGTaGCCCATGACTCTTTTTACT +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTRQRCV*PMTLFT
Trigger: AGTAAAAAGAGTCATGGGCAACACACATCGTTGCCT...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCGAAGGAGAATGTATGTaGTCTCCAGTCTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTEGECM*SPVSVT
Trigger: AGTCACAGAGACTGGAGACAACATACATTCTCCTTC...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGAAGGAGAATGTATGTaGTCTCCAGTCTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTEGECM*SPVSVT
Trigger: AGTCACAGAGACTGGAGACAACATACATTCTCCTTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCCACCTCTTCTTGTCTTaGTCGCTCCATTACAGATTC +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTHLFLS*SLHYRF
Trigger: GAATCTGTAATGGAGCGACAAAGACAAGAAGAGGTG...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACACCTCTTCTTGTCTTaGTCGCTCCATTACAGATTC +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTHLFLS*SLHYRF
Trigger: GAATCTGTAATGGAGCGACAAAGACAAGAAGAGGTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAACAAGACACCTCTTCTaGTCTTTGTCGCTCCATTAC +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTTRHLF*SLSLHY
Trigger: GTAATGGAGCGACAAAGACAAGAAGAGGTGTCTTGT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp AGAATCTTCCGGGTAGTTACTTTCCAAAGCCAATGTGTTATCCTTTATAAAACAACAAGACACCTCTTCTaGTCTTTGTCGCTCCATTAC +
Preference number: 5 (lower is better)
Translates to: RIFRVVTFQSQCVILYKTTRHLF*SLSLHY
Trigger: GTAATGGAGCGACAAAGACAAGAAGAGGTGTCTTGT...TGTTTTATAAAGGATAACACATTGGCTTTGGAAAGTAACTACCCGGAAGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGGATCTTGCATAAACTaGCCACAAGACACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTGSCIN*PQDTSS
Trigger: AGAAGAGGTGTCTTGTGGCAAGTTTATGCAAGATCC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATGTCCACCAGAAAATTTaGGTTAATGGCTGGAAATAT +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYVHQKI*VNGWKY
Trigger: ATATTTCCAGCCATTAACCAAAATTTTCTGGTGGAC...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTGTGACATTCTCATTTaGGTGAACAAACTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDICDILI*VNKLLG
Trigger: GCCCAAGAGTTTGTTCACCAAAATGAGAATGTCACA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp CCCACGGAATACCACACCTCTACTTCTGACTGCTCCTTCATTAATCATAATTATTACTTTAGGATTCTTTaGGTACCAGCTCAATCCTAT +
Preference number: 5 (lower is better)
Translates to: PTEYHTSTSDCSFINHNYYFRIL*VPAQSY
Trigger: ATAGGATTGAGCTGGTACCAAAAGAATCCTAAAGTA...ATAATTATGATTAATGAAGGAGCAGTCAGAAGTAGAGGTGTGGTATTCCGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp AGGAGATATCTTCTTCTCAAATGCTTCTTTTGCACGATTCTGGTTCCATTCATGGTACTTGATAAGCACTaGTTCCATCTTTATTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRYLLLKCFFCTILVPFMVLDKH*FHLYFS
Trigger: GGAGAAATAAAGATGGAACAAGTGCTTATCAAGTAC...CATGAATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGAAGAAGATATCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTGGGGTTTCTTGTACTaGATAAGCACTTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWWGFLY*ISTCSI
Trigger: GATGGAACAAGTGCTTATCAAGTACAAGAAACCCCA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTAGAAACTGGGGTTTCTaGTACTTGATAAGCACTTGT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIRNWGF*YLISTC
Trigger: ACAAGTGCTTATCAAGTACAAGAAACCCCAGTTTCT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTACTTGGATTATCCTCTaGCAAAGTCCTTGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDITWIIL*QSPCQK
Trigger: TTTTTGGCAAGGACTTTGCAAGAGGATAATCCAAGT...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTTCACTTTTGTCTGTaGCCTGTAGTTTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIFHFCL*PVVCFQ
Trigger: CTGAAAGCAAACTACAGGCAACAGACAAAAGTGAAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATGCTCGTTTTCACTTTaGTCTGTTGCCTGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTCSFSL*SVACSL
Trigger: CAAACTACAGGCAACAGACAAAAGTGAAAACGAGCA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGAAGTGGTCCACTATTaGCAAGATCACAGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTEVVHY*QDHSLL
Trigger: AAGAAGACTGTGATCTTGCAAATAGTGGACCACTTC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCACTTAAACCAGTCTTaGGCATTCTTGATCTGTGTT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIHLNQS*AFLICV
Trigger: AACACAGATCAAGAATGCCAAAGACTGGTTTAAGTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTCAGAACTTCCTAGATaGGAGCTACCCAATGTCTTT +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTSELPR*ELPNVF
Trigger: AAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTGA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCAGAACTTCCTAGATaGGAGCTACCCAATGTCTTT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSELPR*ELPNVF
Trigger: AAAGACATTGGGTAGCTCCAATCTAGGAAGTTCTGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAACCAAGGAAGGATCTaGCATAAACTTGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTNQGRI*HKLATR
Trigger: TCTTGTGGCAAGTTTATGCAAGATCCTTCCTTGGTT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTTGGTGAACAAACTCTaGGGCTACAACTGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDILVNKL*GYNCFY
Trigger: GTAAAAACAGTTGTAGCCCAAGAGTTTGTTCACCAA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp ACACAACTCAATACGTTCAATTTTCTCTGGAACCGAAGAACTCATAATTATTGGTGTGACATTCTCATTTaGGTGAACAAACTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TQLNTFNFLWNRRTHNYWCDILI*VNKLLG
Trigger: GCCCAAGAGTTTGTTCACCAAAATGAGAATGTCACA...CCAATAATTATGAGTTCTTCGGTTCCAGAGAAAATTGAACGTATTGAGTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGGAAAGACAGTTCACTaGGTGTTTCTTCAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTGKTVH*VFLQSL
Trigger: AAGAGACTGAAGAAACACCAAGTGAACTGTCTTTCC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCATTAAGGCCACAGTaGATATATGCAAACTCTACA +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISLRPQ*IYANST
Trigger: TGTAGAGTTTGCATATATCAACTGTGGCCTTAATGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTATTTCTCCATACTTTaGTTGGGGAAGTGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIYFSIL*LGKCEK
Trigger: TTTCTCACACTTCCCCAACAAAAGTATGGAGAAATA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTACTTGATAAGCACTaGTTCCATCTTTATTTCTCC +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVLDKH*FHLYFS
Trigger: GGAGAAATAAAGATGGAACAAGTGCTTATCAAGTAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAACTTGGATTATCCTCTaGCAAAGTCCTTGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTTWIIL*QSPCQK
Trigger: TTTTTGGCAAGGACTTTGCAAGAGGATAATCCAAGT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATCTCAAATGCTTCTTTaGCACGATTCTGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSQMLL*HDSGSI
Trigger: AATGGAACCAGAATCGTGCAAAAGAAGCATTTGAGA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTTCACTTTTGTCTGTaGCCTGTAGTTTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTFHFCL*PVVCFQ
Trigger: CTGAAAGCAAACTACAGGCAACAGACAAAAGTGAAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TCTCCATCTCCAAAGGCAAATTTAAGCCATTGTCTCATATTGGAAAATTATACCTTTCACTTTTGTCTGTaGCCTGTAGTTTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: SPSPKANLSHCLILENYTFHFCL*PVVCFQ
Trigger: CTGAAAGCAAACTACAGGCAACAGACAAAAGTGAAA...GGTATAATTTTCCAATATGAGACAATGGCTTAAATTTGCCTTTGGAGATGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAAGTCACCAACAAAATTaGATAGCTCATGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTSHQQN*IAHVLG
Trigger: TCCCAAGACATGAGCTATCAAATTTTGTTGGTGACT...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTTCCATCACACGATTTTaGGAAATTCTCAAACTCTGT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDISITRF*EILKLC
Trigger: ACAGAGTTTGAGAATTTCCAAAAATCGTGTGATGGA...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTCACTGGGAAATATACTaGTCATCGATTCATGGTTTT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIHWEIY*SSIHGF
Trigger: AAAACCATGAATCGATGACAAGTATATTTCCCAGTG...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATACAGACAGTTCTAGAAGCATTTCGATAAGGCAGCAACATCTGGAAGATATTGTCCACCAGAAAATTTaGGTTAATGGCTGGAAATAT +
Preference number: 5 (lower is better)
Translates to: YTDSSRSISIRQQHLEDIVHQKI*VNGWKY
Trigger: ATATTTCCAGCCATTAACCAAAATTTTCTGGTGGAC...AATATCTTCCAGATGTTGCTGCCTTATCGAAATGCTTCTAGAACTGTCTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACATTGGTGAACAAACTCTaGGGCTACAACTGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTLVNKL*GYNCFY
Trigger: GTAAAAACAGTTGTAGCCCAAGAGTTTGTTCACCAA...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACACACTGGGAAATATACTaGTCATCGATTCATGGTTTT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTHWEIY*SSIHGF
Trigger: AAAACCATGAATCGATGACAAGTATATTTCCCAGTG...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS-3UTR CAA 90 bp TATAATCTCAGACCCAACTTTCTTTCCATAAAATGCACACAGAAGAACAGAACAGTCCACCAGAAAATTTaGGTTAATGGCTGGAAATAT +
Preference number: 5 (lower is better)
Translates to: YNLRPNFLSIKCTQKNRTVHQKI*VNGWKY
Trigger: ATATTTCCAGCCATTAACCAAAATTTTCTGGTGGAC...TGTTCTGTTCTTCTGTGTGCATTTTATGGAAAGAAAGTTGGGTCTGAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000513269.1
CDS GCA 72 bp CGCCGCAGGTCCGCAGCCCTTTCCCGCCGGCGCCACTaGGCTCTCCCGCGCCGCGCAAGGCTAGCAAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRRSAALSRRRH*ALPRRARLASS
Trigger: GCTGCTTGCTAGCCTTGCGCGGCGCGGGAGAGCGCAGTGGCGCCGGCGGGAAAGGGCTGCGGACCTGCGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261435.11
CDS GCA 72 bp ACTGCTTCTGGAGCGGGCAGAGGGCGTCGAAGCCGGTaGCGCGTCGTCGAACGCACAACGCGGCGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: TASGAGRGRRSR*RVVERTTRRRR
Trigger: CCTGCGGCGCCGCGTTGTGCGTTCGACGACGCGGCACCGGCTTCGACGCCCTCTGCCCGCTCCAGAAGCAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000515550.1
CDS GCA 72 bp ACTAGCAACACTGGATACGACAACTTCCTTAGGGTTTaGAGTCTTCCGAAAAGGATTTCCCCCAAGATTTTT +
Preference number: 6 (lower is better)
Translates to: TSNTGYDNFLRV*SLPKRISPKIF
Trigger: AAAAATCTTGGGGGAAATCCTTTTCGGAAGACTGCAAACCCTAAGGAAGTTGTCGTATCCAGTGTTGCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS CAA 90 bp GTCTGTCTAGCATCGATGCTGTCAACATGCTCATTAAGGCCACAGTaGATATATGCAAACTCTACACCTCTTCTTGTTATCCAACATGTC +
Preference number: 6 (lower is better)
Translates to: VCLASMLSTCSLRPQ*IYANSTPLLVIQHV
Trigger: GACATGTTGGATAACAAGAAGAGGTGTAGAGTTTGCATATATCAACTGTGGCCTTAATGAGCATGTTGACAGCATCGATGCTAGACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000515550.1
CDS CAA 72 bp GCATCGATGCTGTCAACATGCTCATTAAGGCCACAGTaGATATATGCAAACTCTACACCTCTTCTTGTTATC +
Preference number: 6 (lower is better)
Translates to: ASMLSTCSLRPQ*IYANSTPLLVI
Trigger: GATAACAAGAAGAGGTGTAGAGTTTGCATATATCAACTGTGGCCTTAATGAGCATGTTGACAGCATCGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000515550.1
CDS GCA 72 bp GCTGTCAACATGCTCATTAAGGCCACAGTTGATATATaGAAACTCTACACCTCTTCTTGTTATCCAACATGT +
Preference number: 6 (lower is better)
Translates to: AVNMLIKATVDI*KLYTSSCYPTC
Trigger: ACATGTTGGATAACAAGAAGAGGTGTAGAGTTTGCATATATCAACTGTGGCCTTAATGAGCATGTTGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261435.11
ENST00000511480.5
ENST00000515550.1
CDS GCA 72 bp ATTTTCAATGTCTGTCTAGCATCGATGCTGTCAACATaGTCATTAAGGCCACAGTTGATATATGCAAACTCT +
Preference number: 6 (lower is better)
Translates to: IFNVCLASMLST*SLRPQLIYANS
Trigger: AGAGTTTGCATATATCAACTGTGGCCTTAATGAGCATGTTGACAGCATCGATGCTAGACAGACATTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515550.1
CDS TCA 72 bp ATACACTACATCAGGATCCAGATCAGAAAATATCTCTaGGATACTGGTGAAGAGTTCTTCCTGATCAACTTT +
Preference number: 6 (lower is better)
Translates to: IHYIRIQIRKYL*DTGEEFFLINF
Trigger: AAAGTTGATCAGGAAGAACTCTTCACCAGTATCTCAGAGATATTTTCTGATCTGGATCCTGATGTAGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261435.11
ENST00000511480.5
CDS TCA 72 bp AACTGGCACCTAGTAAGCACCCAATTAAGTTCCCTTTaGAATCACATTCAGAAAGCATCAAATACACTACAT +
Preference number: 6 (lower is better)
Translates to: NWHLVSTQLSSL*NHIQKASNTLH
Trigger: ATGTAGTGTATTTGATGCTTTCTGAATGTGATTTCAAAGGGAACTTAATTGGGTGCTTACTAGGTGCCAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511480.5