RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MZF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000099326

Ensembl transcript IDs: ENST00000215057.7, ENST00000594108.1, ENST00000594234.5, ENST00000595245.1, ENST00000596039.1, ENST00000599369.5, ENST00000600004.1, ENST00000600048.1

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCCAGCAGCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTaGACGGAAAGGGGCCGGGAGGCTCGGGCGCACCAGGAGGGGCCG +
Preference number: 1 (lower is better)
Translates to: APAARRAARSSRGTR*TERGREARAHQEGP
Trigger: CGGCCCCTCCTGGTGCGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGCTGCTGGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR CCA 90 bp GCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCGGGAGGCTCGGGCGCCCGGGGGATCGCCGTaGATGCGCTGGTGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ARSSRGTRCTERGREARAPGGSP*MRWCCS
Trigger: GCTGCAGCACCAGCGCATCCACGGCGATCCCCCGGG...CGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR GCA 90 bp GCAGCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCGGGGATCGCCGTGGATaGGCTGGTGCTGCAGCAGAT +
Preference number: 2 (lower is better)
Translates to: AARRAARSSRGTRCTERGGDRRG*AGAAAD
Trigger: ATCTGCTGCAGCACCAGCGCATCCACGGCGATCCCC...GCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR TCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGCCGCGAGACCTGCGTaGAGCCCAGGCCGCACTCAC +
Preference number: 2 (lower is better)
Translates to: GGRCSDHGGHSASRLELLAARPA*SPGRTH
Trigger: GTGAGTGCGGCCTGGGCTTCACGCAGGTCTCGCGGC...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR GCA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGTGCGGCCGCACTCGCTaGACACGAATGGTCGCTCAC +
Preference number: 2 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQCGRTR*TRMVAH
Trigger: GTGAGCGACCATTCGTGTGCAGCGAGTGCGGCCGCA...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR GCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGTGTGTACCGCCTGGTaGTCCAGCAGCACGGCGCGC +
Preference number: 2 (lower is better)
Translates to: GGRCSDHGGHSASRLELLVCTAW*SSSTAR
Trigger: GCGCGCCGTGCTGCTGGAGCACCAGGCGGTACACAC...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR CCA 90 bp CGTGTGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCCTCGCTGCACACGAATaGTCGCTCACCCGTGTGGAT +
Preference number: 2 (lower is better)
Translates to: RVHSPMLFQARAAHEALALAAHE*SLTRVD
Trigger: ATCCACACGGGTGAGCGACCATTCGTGTGCAGCGAG...GGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR-3UTR GCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGTGCACTCTCCGATaGTCTTCCAGGCGCGCGCTG +
Preference number: 2 (lower is better)
Translates to: RCSDHGGHSASRLELLGAVCTLR*SSRRAL
Trigger: CAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACAC...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR GCA 72 bp GCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTaGACGGAAAGGGGCCGGGAGGCTCGGGCGCACCAG +
Preference number: 3 (lower is better)
Translates to: ARRAARSSRGTR*TERGREARAHQ
Trigger: CTGGTGCGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
3UTR GCA 72 bp CCGTGTGCACTCTCCGATGCTCTTCCAGGCGCGCGCTaGGCACGAAGCCCTGGCCACAGTCGCCGCACACGA +
Preference number: 3 (lower is better)
Translates to: PCALSDALPGAR*ARSPGHSRRTR
Trigger: TCGTGTGCGGCGACTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR TCA 90 bp GCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCGGGAGGCTCGGGCGCCTGCACCTGGACTGTaGCCCATCTCCGGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ARSSRGTRCTERGREARAPAPGL*PISGVR
Trigger: GCGGACCCCGGAGATGGGTCACAGTCCAGGTGCAGG...CGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp GCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCGGGAGGCTCGGGCGCCTGGCCGCTGCCCCTaGACACGGGCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: ARSSRGTRCTERGREARAPGRCP*TRAWIS
Trigger: TGAGATCCAGGCCCGTGTGCAGGGGCAGCGGCCAGG...CGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp GCAGCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCCCGTGTGTACCGCCTaGTGCTCCAGCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: AARRAARSSRGTRCTERGPVCTA*CSSSTA
Trigger: CGCCGTGCTGCTGGAGCACCAGGCGGTACACACGGG...GCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp GCAGCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCTGCGGCCGCACTCGCTaGACACGAATGGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AARRAARSSRGTRCTERGCGRTR*TRMVAH
Trigger: GTGAGCGACCATTCGTGTGCAGCGAGTGCGGCCGCA...GCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp GCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCGGGAGGCTCGGGCGCCTCAGGCAGGAGGGTaGGTACAGACTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARSSRGTRCTERGREARAPQAGG*VQTPGW
Trigger: CCACCCAGGAGTCTGTACCCACCCTCCTGCCTGAGG...CGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp CGTGTGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCCCCCCAGCTTCCTCATaGCACAGGGCCCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RVHSPMLFQARAAHEALAPPASS*HRALGC
Trigger: GCACCCCAGGGCCCTGTGGCATGAGGAAGCTGGGGG...GGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACACG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp CATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGACGCGCTGGTGAGCCGCGAGACCTaGGTGAAGCCCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: HGGHSASRLELLGAVDALVSRET*VKPRPH
Trigger: GTGCGGCCTGGGCTTCACGCAGGTCTCGCGGCTCAC...CAGCGCGTCCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGGGCCGCTCCTCGGTGTaGGTAAGCTGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQGRSSV*VSWWRS
Trigger: GCTGCGCCACCAGCTTACGCACACCGAGGAGCGGCC...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGTCTCGCGGCACTCGCTaGACGGAAAGGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQSRGTR*TERGRE
Trigger: CTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGA...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGCTGTGCACGCGCCGGTaGTGCAGCAGCACTGAGCGG +
Preference number: 4 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQLCTRR*CSSTER
Trigger: CCGCTCAGTGCTGCTGCAGCACCGGCGCGTGCACAG...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTCCCGGCTCCGGCCCCTaGGGAGAAGATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAPGSGP*GEDAPS
Trigger: GCTGGGGGCATCTTCTCCCCAGGGGCCGGAGCCGGG...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCCAGCCTCCTCGGGGCTaGCTGGCCGCTGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPIQPPRG*LAAAPA
Trigger: TGCAGGGGCAGCGGCCAGGCAGCCCCGAGGAGGCTG...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp CATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGACGCGCTGGTGTGCACTCTCCGATaGTCTTCCAGGCGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: HGGHSASRLELLGAVDALVCTLR*SSRRAL
Trigger: CAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACAC...CAGCGCGTCCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTCCCGGGGGATCGCCGTaGATGCGCTGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAPGGSP*MRWCCS
Trigger: GCTGCAGCACCAGCGCATCCACGGCGATCCCCCGGG...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR TCA 90 bp CAGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCCCTGCACCTGGACTGTaGCCCATCTCCGGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QEWGRQRWCCPCGRPSPTPAPGL*PISGVR
Trigger: GCGGACCCCGGAGATGGGTCACAGTCCAGGTGCAGG...GGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp GCAGCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCGTCCTCTGTAACCTCTaGCTCCTCTTTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AARRAARSSRGTRCTERGVLCNL*LLFHLQ
Trigger: CTGCAGGTGAAAGAGGAGTCAGAGGTTACAGAGGAC...GCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR TCA 90 bp CAGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCGGGGTGCTCCCTCCATaGGGGACCCTCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QEWGRQRWCCPCGRPSPTGVLPP*GTLRPS
Trigger: ACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCC...GGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCGGGAGGCTCGGGCGCCCAGTGGTGATTCCTaGATAGTCCTAGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ARSSRGTRCTERGREARAPSGDS*IVLGGV
Trigger: GACACCTCCTAGGACTATGCAGGAATCACCACTGGG...CGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTCACAGGGCCCTGGGGTaGTCCCTCCATGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAHRALG*SLHEGP
Trigger: GGGTCCCTCATGGAGGGAGCACCCCAGGGCCCTGTG...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCATGGGGGTGCTCGGTCTaGGGAGCCCAGCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPWGCSV*GAQHRR
Trigger: CCTGCGGTGCTGGGCTCCCCAGACCGAGCACCCCCA...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp CATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGACGCGCTGCTTGGAGCGTACCTCTaGACGCAGCCACTGGCGACA +
Preference number: 4 (lower is better)
Translates to: HGGHSASRLELLGAVDALLGAYL*TQPLAT
Trigger: TGTCGCCAGTGGCTGCGTCCAGAGGTACGCTCCAAG...CAGCGCGTCCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR TCA 90 bp CGTGTGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCCTGCAGGCCCAGTGGTaGTTCCTGCATAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: RVHSPMLFQARAAHEALALQAQW*FLHSPR
Trigger: CCTAGGACTATGCAGGAATCACCACTGGGCCTGCAG...GGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR TCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGCCGCGAGACCTGCGTaGAGCCCAGGCCGCACTCAC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLAARPA*SPGRTH
Trigger: GTGAGTGCGGCCTGGGCTTCACGCAGGTCTCGCGGC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCAGTGTCTGCCCCTCTaGGCTCAGCGGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLQCLPL*AQRAAP
Trigger: CGGAGCGGCCCGCTGAGCGCAGAGGGGCAGACACTG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR GCA 90 bp GGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCCTCATCTTCTGGGGGTaGTCGGTCTGGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GVGRDGAVHAEGLVPPHPLIFWG*SVWGAQ
Trigger: CTGGGCTCCCCAGACCGAGCACCCCCAGAAGATGAG...GGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCTGGCCGCTGCCCCTaGACACGGGCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTPGRCP*TRAWIS
Trigger: TGAGATCCAGGCCCGTGTGCAGGGGCAGCGGCCAGG...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACACAGGGCCCTGGGGTaGTCCCTCCATGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTHRALG*SLHEGP
Trigger: GGGTCCCTCATGGAGGGAGCACCCCAGGGCCCTGTG...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCCCCCAGCTTCCTCATaGCACAGGGCCCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRQRWCCPCGRPSPTTPHPPASS*HRALGC
Trigger: GCACCCCAGGGCCCTGTGGCATGAGGAAGCTGGGGG...ATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCTTCCAGGCGCGCGCTaGGCACGAAGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLLPGAR*ARSPGH
Trigger: GTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACATGGGCCAGGGCCTCTTaGGGCCCTGTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTWARAS*GPVASS
Trigger: TGAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCA...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCTGGGCCAGGGCCTCTTaGGGCCCTGTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GGRCSDHGGHSASRLELLWARAS*GPVASS
Trigger: TGAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCA...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp CATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGACGCGCTGGTACAGACTCCTGGGTaGCAGCTAGAGGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: HGGHSASRLELLGAVDALVQTPG*QLEAQT
Trigger: AGTCTGGGCCTCTAGCTGCCACCCAGGAGTCTGTAC...CAGCGCGTCCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCCCGGGGGATCGCCGTaGATGCGCTGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLPGGSP*MRWCCS
Trigger: GCTGCAGCACCAGCGCATCCACGGCGATCCCCCGGG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGGCCGCTTCTTCCCATaGTCCCCGCCTCGAATCCGT +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAGRFFP*SPPRIR
Trigger: ACGGATTCGAGGCGGGGAGCATGGGAAGAAGCGGCC...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACCGGAAACGCAGGCGTaGAGCTTCAGGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPPETQA*SFRAWV
Trigger: GACCCAGGCCCTGAAGCTGCACGCCTGCGTTTCCGG...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp CATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGACGCGCTGGTGTGGATCTTCTGGTaGCTCAGCAGGTTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: HGGHSASRLELLGAVDALVWIFW*LSRLLR
Trigger: ACGCAGCAACCTGCTGAGGCACCAGAAGATCCACAC...CAGCGCGTCCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGTGTGTACCGCCTGGTaGTCCAGCAGCACGGCGCGC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLVCTAW*SSSTAR
Trigger: GCGCGCCGTGCTGCTGGAGCACCAGGCGGTACACAC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGTGTGGATGCGCTGGTaGTCGGTGAGCCGCGAGACC +
Preference number: 4 (lower is better)
Translates to: GGRCSDHGGHSASRLELLVWMRW*SVSRET
Trigger: GGTCTCGCGGCTCACCGAGCACCAGCGCATCCACAC...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACATCTGAGGCCAGTGTCTaGCCCTCCCTCCTCGCGCTG +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTSEASV*PSLLAL
Trigger: CAGCGCGAGGAGGGAGGGGCAGACACTGGCCTCAGA...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp CAGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCTCCTGGCCCTGCACCTaGACTGTGACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: QEWGRQRWCCPCGRPSPTSWPCT*TVTHLR
Trigger: CCGGAGATGGGTCACAGTCCAGGTGCAGGGCCAGGA...GGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTTCCTGGCCCTGCACCTaGACTGTGACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGASWPCT*TVTHLR
Trigger: CCGGAGATGGGTCACAGTCCAGGTGCAGGGCCAGGA...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp TGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCCTCAGGCAGGAGGGTaGGTACAGACTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WGRQRWCCPCGRPSPTTPPQAGG*VQTPGW
Trigger: CCACCCAGGAGTCTGTACCCACCCTCCTGCCTGAGG...GGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACATGCCACAGGGCCCTaGGGTGCTCCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPHATGP*GAPSMR
Trigger: CCTCATGGAGGGAGCACCCCAGGGCCCTGTGGCATG...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACAGGGCCGCCTCATCCTaGGGGCCAAGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHRAASS*GPSLHS
Trigger: AGAGTGGAGGCTTGGCCCCCAGGATGAGGCGGCCCT...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCCGGAAACGCAGGCGTaGAGCTTCAGGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLPETQA*SFRAWV
Trigger: GACCCAGGCCCTGAAGCTGCACGCCTGCGTTTCCGG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACAGCCTCCTCGGGGCTaGCTGGCCGCTGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGQPPRG*LAAAPA
Trigger: TGCAGGGGCAGCGGCCAGGCAGCCCCGAGGAGGCTG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGTGTGTACGCGGAGATaGTGCGTGAGCGTAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGRCSDHGGHSASRLELLVCTRR*CVSVGR
Trigger: GCGGCCTACGCTCACGCAGCATCTCCGCGTACACAC...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGGTACAGACTCCTaGGTGGCAGCTAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAVGTDS*VAARGP
Trigger: TGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCAC...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCAACGGTCCCACATCTCTaGGCCTCCTCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPTVPHL*ASSGRR
Trigger: CCTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCGT...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCACGGTCCCACATCTCTaGGCCTCCTCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGRCSDHGGHSASRLELLTVPHL*ASSGRR
Trigger: CCTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCGT...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCATGCCACAGGGCCCTaGGGTGCTCCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLHATGP*GAPSMR
Trigger: CCTCATGGAGGGAGCACCCCAGGGCCCTGTGGCATG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGACAGTGCGTCCCGGCTaGAGCTACTCGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLTVRPG*SYSALW
Trigger: CCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp TGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCTGGGGTCGGCAGAGATaGTGCTGTCCATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WGRQRWCCPCGRPSPTTPWGRQR*CCPCGR
Trigger: CCTTCCGCATGGACAGCACCATCTCTGCCGACCCCA...GGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCAACCAGGTCAGGTATCTaGGGCCAGTGTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPTRSGI*GQCLPL
Trigger: GAGGGGCAGACACTGGCCTCAGATACCTGACCTGGT...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGGGTTGCTGCGTTGGCTaGACACCTTGCCACATACAT +
Preference number: 4 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQGCCVG*TPCHIH
Trigger: ATGTATGTGGCAAGGTGTTCAGCCAACGCAGCAACC...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR TCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGTGCTGCAGCAGCACTaGGCGGCGGCCGAAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGVLQQH*AAAEAL
Trigger: GAGCGCTTCGGCCGCCGCTCAGTGCTGCTGCAGCAC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACAGTGTCTGCCCCTCTaGGCTCAGCGGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGQCLPL*AQRAAP
Trigger: CGGAGCGGCCCGCTGAGCGCAGAGGGGCAGACACTG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCAGAAAGGCCAGCCATaGCGAGGTCCCAGGGGACGT +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLQKGQP*RGPRGR
Trigger: ACGTCCCCTGGGACCTCGGCATGGCTGGCCTTTCTG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGGGAGCAGAAGCGCATaGGCAAAGCCACCTTCGCGG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLGSRSA*AKPPSR
Trigger: CCGCGAAGGTGGCTTTGCGCATGCGCTTCTGCTCCC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACTTCCAGGCGCGCGCTaGGCACGAAGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGLPGAR*ARSPGH
Trigger: GTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGGGGATCGCCGTGGATaGGCTGGTGCTGCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLGDRRG*AGAAAD
Trigger: ATCTGCTGCAGCACCAGCGCATCCACGGCGATCCCC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACGGTCGGCAGAGATGGTaGTGTCCATGCGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHGRQRW*CPCGRP
Trigger: AGGCCTTCCGCATGGACAGCACCATCTCTGCCGACC...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCTTGGAGCGTACCTCTaGACGCAGCCACTGGCGACA +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHLGAYL*TQPLAT
Trigger: TGTCGCCAGTGGCTGCGTCCAGAGGTACGCTCCAAG...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACGTGGGTACAGACTCCTaGGTGGCAGCTAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHVGTDS*VAARGP
Trigger: TGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCAC...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGACGGTCCCACATCTCTaGGCCTCCTCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLTVPHL*ASSGRR
Trigger: CCTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCGT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGTGAGCTTGAGGCGCTaGCTGAAGCGCTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLVSLRR*LKRWPH
Trigger: GTGTGGCCAGCGCTTCAGCCAGCGCCTCAAGCTCAC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGGCTTCTCTCGTCGGTaGGTGCGCAGATGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLGFSRR*VRRCCV
Trigger: CACGCAGCATCTGCGCACCCACCGACGAGAGAAGCC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCTCATTCCCCCGTGGGTaGCATCGATTTCGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPISFPRG*HRFRGP
Trigger: CGGCCCTCGAAATCGATGCCACCCACGGGGGAATGA...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGCCGCTCCGCGCTCCTaGGCACGCGCAGTCTTCGAC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLAAPRS*ARAVFD
Trigger: GTCGAAGACTGCGCGTGCTCAGGAGCGCGGAGCGGC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR TCA 90 bp TGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCCTCTAGCTTCACCATaGCAGGCCCCTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: WGRQRWCCPCGRPSPTTPPLASP*QAPHLL
Trigger: CAGAAGATGAGGGGCCTGTCATGGTGAAGCTAGAGG...GGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCTGCAGGCCCAGTGGTaGTTCCTGCATAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHLQAQW*FLHSPR
Trigger: CCTAGGACTATGCAGGAATCACCACTGGGCCTGCAG...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGGGGTGCTCCCTCCATaGGGGACCCTCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGGVLPP*GTLRPS
Trigger: ACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGCCGCGAGACCTGCGTaGAGCCCAGGCCGCACTCAC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLAARPA*SPGRTH
Trigger: GTGAGTGCGGCCTGGGCTTCACGCAGGTCTCGCGGC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCGCGCTGGTGCTGAATaGGCTTGGTGCTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLRAGAE*AWCSGG
Trigger: TCCACCAGAGCACCAAGCTCATTCAGCACCAGCGCG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCCCCAGTGGTGATTCCTaGATAGTCCTAGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GVGRDGAVHAEGLVPPHPPSGDS*IVLGGV
Trigger: GACACCTCCTAGGACTATGCAGGAATCACCACTGGG...GGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTCCTCAGGCCCAGTCTTaGTGTGGGGAAAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAPQAQS*CGERSG
Trigger: ACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGG...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGACCCTGGGGAGAAGATaGCCCCAGCTTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLTLGRR*PQLPHA
Trigger: GGCATGAGGAAGCTGGGGGCATCTTCTCCCCAGGGT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTTCCAGGCGCGCGCTaGGCACGAAGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLPGAR*ARSPGH
Trigger: GTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGATCTCGCGGCACTCGCTaGACGGAAAGGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGSRGTR*TERGRE
Trigger: CTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGA...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGTGAGCCGCGAGACCTaGGTGAAGCCCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGVSRET*VKPRPH
Trigger: GTGCGGCCTGGGCTTCACGCAGGTCTCGCGGCTCAC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGATGGGTGCGCAGATGCTaGGTGAGCGTGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGWVRRC*VSVGRW
Trigger: CCAGCGGCCCACGCTCACGCAGCATCTGCGCACCCA...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATTACCTGGGGAGAAGATaGCCCCAGCTTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: GRQRWCCPCGRPSPTTPHYLGRR*PQLPHA
Trigger: GGCATGAGGAAGCTGGGGGCATCTTCTCCCCAGGTA...ATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACAGATGGTGCTGTCCATaGGGAAGGCCTAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHRWCCP*GRPSPT
Trigger: GGTGGGACTAGGCCTTCCGCATGGACAGCACCATCT...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp CAGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCGTAGGGGCTGGAAACTaGAGGGCTCCATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QEWGRQRWCCPCGRPSPTVGAGN*RAPSSL
Trigger: CAGAGAAGATGGAGCCCTCCAGTTTCCAGCCCCTAC...GGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTAGGGGCTGGAAACTaGAGGGCTCCATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAVGAGN*RAPSSL
Trigger: CAGAGAAGATGGAGCCCTCCAGTTTCCAGCCCCTAC...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp AGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTTTCAGGTAGGGGCTaGAAACTGGAGGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RCSDHGGHSASRLELLGAVSGRG*KLEGSI
Trigger: GATGGAGCCCTCCAGTTTCCAGCCCCTACCTGAAAC...AGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACAGTACAGACTCCTGGGTaGCAGCTAGAGGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTVQTPG*QLEAQT
Trigger: AGTCTGGGCCTCTAGCTGCCACCCAGGAGTCTGTAC...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGTGGGTACAGACTCCTaGGTGGCAGCTAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLVGTDS*VAARGP
Trigger: TGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCAC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACAGGCCCAGTCTTGCTGTaGGGAAAGATCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTGPVLL*GKIWSS
Trigger: GCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCC...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCCCAGTCTTGCTGTaGGGAAAGATCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGRCSDHGGHSASRLELLGPVLL*GKIWSS
Trigger: GCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCC...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCACTCCTCAGATCGCTaGGGAGCAGAAGCGCATGCG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLHSSDR*GAEAHA
Trigger: CGCATGCGCTTCTGCTCCCCAGCGATCTGAGGAGTG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCCGGGGGATCGCCGTaGATGCGCTGGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPGGSP*MRWCCS
Trigger: GCTGCAGCACCAGCGCATCCACGGCGATCCCCCGGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCACCCTGGGAGAGACTTaGGTCATAGCCAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: GVGRDGAVHAEGLVPPHPTLGET*VIAKMA
Trigger: TGCCATCTTGGCTATGACCCAAGTCTCTCCCAGGGT...GGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp GGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCCCATCTCACTTACCTaGGGAGAAGATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRQRWCCPCGRPSPTTPHPISLT*GEDAPS
Trigger: GCTGGGGGCATCTTCTCCCCAGGTAAGTGAGATGGG...ATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCCCACCGCGTCTCCATaGCAACTCCCTACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLPTASP*QLPTGR
Trigger: CCTTCCTGTAGGGAGTTGCCATGGAGACGCGGTGGG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCTGCACCTGGACTGTaGCCCATCTCCGGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPAPGL*PISGVR
Trigger: GCGGACCCCGGAGATGGGTCACAGTCCAGGTGCAGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGGGTGCTCCCTCCATaGGGGACCCTCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGVLPP*GTLRPS
Trigger: ACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCGGTGCCAAGTCAACCTaGAACCCTGGGAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPIGAKST*NPGRDL
Trigger: CAAGTCTCTCCCAGGGTTTCAGGTTGACTTGGCACC...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACCGGAAACGCAGGCGTaGAGCTTCAGGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGPETQA*SFRAWV
Trigger: GACCCAGGCCCTGAAGCTGCACGCCTGCGTTTCCGG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCTGGCCGCTGCCCCTaGACACGGGCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPGRCP*TRAWIS
Trigger: TGAGATCCAGGCCCGTGTGCAGGGGCAGCGGCCAGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACGACTCCTCTTTCACCTaGAGGCCCAGTGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHDSSFT*RPSGDS
Trigger: GGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTC...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCCCTCAGGCCCAGTCTTaGTGTGGGGAAAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPIPQAQS*CGERSG
Trigger: ACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGG...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCACAGGGCCCTGGGGTaGTCCCTCCATGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLHRALG*SLHEGP
Trigger: GGGTCCCTCATGGAGGGAGCACCCCAGGGCCCTGTG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCCCCAGCTTCCTCATaGCACAGGGCCCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPPASS*HRALGC
Trigger: GCACCCCAGGGCCCTGTGGCATGAGGAAGCTGGGGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGCCGCTCCTCGGTGTaGGTAAGCTGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGRSSV*VSWWRS
Trigger: GCTGCGCCACCAGCTTACGCACACCGAGGAGCGGCC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTCTCGCGGCACTCGCTaGACGGAAAGGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLSRGTR*TERGRE
Trigger: CTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTGTGCACGCGCCGGTaGTGCAGCAGCACTGAGCGG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLCTRR*CSSTER
Trigger: CCGCTCAGTGCTGCTGCAGCACCGGCGCGTGCACAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTGGGTGCGCAGATGCTaGGTGAGCGTGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLWVRRC*VSVGRW
Trigger: CCAGCGGCCCACGCTCACGCAGCATCTGCGCACCCA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCTCGCGCTGTTCCTTCTaGAGCTGCGGCTTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPISRCSF*SCGFRK
Trigger: CTTCCTAAAGCCGCAGCTGCAGAAGGAACAGCGCGA...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTGGGCCAGGGCCTCTTaGGGCCCTGTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLWARAS*GPVASS
Trigger: TGAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCAGTTTCAGGTAGGGGCTaGAAACTGGAGGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPVSGRG*KLEGSI
Trigger: GATGGAGCCCTCCAGTTTCCAGCCCCTACCTGAAAC...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGTACAGACTCCTGGGTaGCAGCTAGAGGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLVQTPG*QLEAQT
Trigger: AGTCTGGGCCTCTAGCTGCCACCCAGGAGTCTGTAC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGAGGGATCCTCGTCCGTaGGGTCCTGTTCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLRDPRP*GPVHSS
Trigger: TGAGGAGTGAACAGGACCCCACGGACGAGGATCCCT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAACAGTGCGTCCCGGCTaGAGCTACTCGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGTVRPG*SYSALW
Trigger: CCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGT...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCAGTCCTCTGTAACCTCTaGCTCCTCTTTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPVLCNL*LLFHLQ
Trigger: CTGCAGGTGAAAGAGGAGTCAGAGGTTACAGAGGAC...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCAGGAATCTGCGTTTATaGAGGGGATGGCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPIRNLRL*RGWHRR
Trigger: TCTGCGGTGCCATCCCCTTCATAAACGCAGATTCCT...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCCGCCTCGAATCCGTaGGTCGGCATGCGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPASNP*VGMRKP
Trigger: AGGCTTGCGCATGCCGACGCACGGATTCGAGGCGGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215057.7
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGGCCGCTTCTTCCCATaGTCCCCGCCTCGAATCCGT +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGGRFFP*SPPRIR
Trigger: ACGGATTCGAGGCGGGGAGCATGGGAAGAAGCGGCC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCAGCCTCCTCGGGGCTaGCTGGCCGCTGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCQPPRG*LAAAPA
Trigger: TGCAGGGGCAGCGGCCAGGCAGCCCCGAGGAGGCTG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGACTCCTCTTTCACCTaGAGGCCCAGTGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLDSSFT*RPSGDS
Trigger: GGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCCTCAGGCCCAGTCTTaGTGTGGGGAAAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLPQAQS*CGERSG
Trigger: ACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACTGGACCTGCGGAGATaGTGCCTAGCTGCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGLDLRR*CLAAAR
Trigger: TCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGTGTGCACTCTCCGATaGTCTTCCAGGCGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGVCTLR*SSRRAL
Trigger: CAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACAC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGCACGCGCCGGTGCTaGAGCAGCACTGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRCTRRC*SSTERR
Trigger: CCGCCGCTCAGTGCTGCTGCAGCACCGGCGCGTGCA...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGATGTACGCGGAGATGCTaGGTGAGCGTAGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGCTRRC*VSVGRW
Trigger: CCAGCGGCCTACGCTCACGCAGCATCTCCGCGTACA...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGTAGGGGCTGGAAACTaGAGGGCTCCATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLVGAGN*RAPSSL
Trigger: CAGAGAAGATGGAGCCCTCCAGTTTCCAGCCCCTAC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGTTTCAGGTAGGGGCTaGAAACTGGAGGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLVSGRG*KLEGSI
Trigger: GATGGAGCCCTCCAGTTTCCAGCCCCTACCTGAAAC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTGCAGCGCGAACCCTaGGGAGAAGATGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLQREP*GEDAPS
Trigger: GCTGGGGGCATCTTCTCCCCAGGGTTCGCGCTGCAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGGGTGATTGGATCTaGCCAGAAAGGCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLEGDWI*PERPAM
Trigger: CATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp GGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCAGCAGGTTGCTGCGTTaGCTGAACACCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: GGRCSDHGGHSASRLELLSRLLR*LNTLPH
Trigger: ATGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCT...GAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGTGAGCTTGAGGCGCTaGCTGAAGCGCTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGVSLRR*LKRWPH
Trigger: GTGTGGCCAGCGCTTCAGCCAGCGCCTCAAGCTCAC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGGCTTCTCTCGTCGGTaGGTGCGCAGATGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGGFSRR*VRRCCV
Trigger: CACGCAGCATCTGCGCACCCACCGACGAGAGAAGCC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACAAGAATCATTCCCCCGTaGGTGGCATCGATTTCGAGG +
Preference number: 4 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTRIIPP*VASISR
Trigger: CCTCGAAATCGATGCCACCCACGGGGGAATGATTCT...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGCCGCTCCGCGCTCCTaGGCACGCGCAGTCTTCGAC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCAAPRS*ARAVFD
Trigger: GTCGAAGACTGCGCGTGCTCAGGAGCGCGGAGCGGC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR TCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAACCAGGTCAGGTATCTaGGGCCAGTGTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGTRSGI*GQCLPL
Trigger: GAGGGGCAGACACTGGCCTCAGATACCTGACCTGGT...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR TCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCCTGCACCTGGACTGTaGCCCATCTCCGGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRPAPGL*PISGVR
Trigger: GCGGACCCCGGAGATGGGTCACAGTCCAGGTGCAGG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGGGGTGCTCCCTCCATaGGGGACCCTCAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRGVLPP*GTLRPS
Trigger: ACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGGGTTGCTGCGTTGGCTaGACACCTTGCCACATACAT +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLGCCVG*TPCHIH
Trigger: ATGTATGTGGCAAGGTGTTCAGCCAACGCAGCAACC...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTGCTGCAGCAGCACTaGGCGGCGGCCGAAGCGCTC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVLQQH*AAAEAL
Trigger: GAGCGCTTCGGCCGCCGCTCAGTGCTGCTGCAGCAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGCCGCGAGACCTGCGTaGAGCCCAGGCCGCACTCAC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCAARPA*SPGRTH
Trigger: GTGAGTGCGGCCTGGGCTTCACGCAGGTCTCGCGGC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTCATCTTCTGGGGGTaGTCGGTCTGGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLIFWG*SVWGAQ
Trigger: CTGGGCTCCCCAGACCGAGCACCCCCAGAAGATGAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCCCCCAGCTTCCTCATaGCACAGGGCCCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRPPASS*HRALGC
Trigger: GCACCCCAGGGCCCTGTGGCATGAGGAAGCTGGGGG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTGGACCTGCGGAGATaGTGCCTAGCTGCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLDLRR*CLAAAR
Trigger: TCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTGCGGCCGCACTCGCTaGACACGAATGGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLCGRTR*TRMVAH
Trigger: GTGAGCGACCATTCGTGTGCAGCGAGTGCGGCCGCA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGGCTGTTCGCCCGTGTaGACTCTCCGATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGGCSPV*TLRCSS
Trigger: GGAAGAGCATCGGAGAGTGCACACGGGCGAACAGCC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGGGATCGCCGTGGATaGGCTGGTGCTGCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGDRRG*AGAAAD
Trigger: ATCTGCTGCAGCACCAGCGCATCCACGGCGATCCCC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTGCACGCGCCGGTGCTaGAGCAGCACTGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCCTRRC*SSTERR
Trigger: CCGCCGCTCAGTGCTGCTGCAGCACCGGCGCGTGCA...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCTGTGCACGCGCCGGTaGTGCAGCAGCACTGAGCGG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRLCTRR*CSSTER
Trigger: CCGCTCAGTGCTGCTGCAGCACCGGCGCGTGCACAG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTGTACGCGGAGATGCTaGGTGAGCGTAGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLCTRRC*VSVGRW
Trigger: CCAGCGGCCTACGCTCACGCAGCATCTCCGCGTACA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGTGAGCCGCGAGACCTaGGTGAAGCCCAGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRVSRET*VKPRPH
Trigger: GTGCGGCCTGGGCTTCACGCAGGTCTCGCGGCTCAC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTGGGTGAGGTTGGCGTaGTGCCGAAAGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLWVRLA*CRKLWP
Trigger: CGGCCAGAGCTTTCGGCAGCACGCCAACCTCACCCA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp AGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCTCCACTCTTCAAGGTaGCAAGTCAACCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: SGVGRDGAVHAEGLVPPHLHSSR*QVNLKP
Trigger: GGGTTTCAGGTTGACTTGGCACCTTGAAGAGTGGAG...GTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp CAGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCTGTTCCTTCTGCAGCTaGGGCTTTAGGAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: QEWGRQRWCCPCGRPSPTCSFCS*GFRKES
Trigger: AGATTCCTTCCTAAAGCCGCAGCTGCAGAAGGAACA...GGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGATTAGAACTCCGTCGGTaGCCCACCGCGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGLELRR*PTASPW
Trigger: CCATGGAGACGCGGTGGGGCACCGACGGAGTTCTAA...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGATCAGGTCATACTCCTaGCCGCTTCTTCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLIRSYS*PLLPML
Trigger: GAGCATGGGAAGAAGCGGCCAGGAGTATGACCTGAT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTGGGGGTGCTCGGTCTaGGGAGCCCAGCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCWGCSV*GAQHRR
Trigger: CCTGCGGTGCTGGGCTCCCCAGACCGAGCACCCCCA...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGGGCCAGGGCCTCTTaGGGCCCTGTGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRWARAS*GPVASS
Trigger: TGAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCA...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTCCTGGCCCTGCACCTaGACTGTGACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLSWPCT*TVTHLR
Trigger: CCGGAGATGGGTCACAGTCCAGGTGCAGGGCCAGGA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGAGCAGGTTGCTGCGTTaGCTGAACACCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLSRLLR*LNTLPH
Trigger: ATGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGCTTCTCTCGTCGGTaGGTGCGCAGATGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGFSRR*VRRCCV
Trigger: CACGCAGCATCTGCGCACCCACCGACGAGAGAAGCC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAATGAGCTTGGTGCTCTaGTGGAAGCGGCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGMSLVL*WKRRPQ
Trigger: CTGTGGCCGCCGCTTCCACCAGAGCACCAAGCTCAT...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCAGGGGACGTGGAGGTaGGGGCTTACACTACCTGGA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLQGTWR*GLTLPG
Trigger: TCCAGGTAGTGTAAGCCCTCACCTCCACGTCCCCTG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCCTGGCCGCTGCCCCTaGACACGGGCCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCPGRCP*TRAWIS
Trigger: TGAGATCCAGGCCCGTGTGCAGGGGCAGCGGCCAGG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCACAGGGCCCTGGGGTaGTCCCTCCATGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCHRALG*SLHEGP
Trigger: GGGTCCCTCATGGAGGGAGCACCCCAGGGCCCTGTG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTACCCTGGGGAGAAGATaGCCCCAGCTTCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLTLGRR*PQLPHA
Trigger: GGCATGAGGAAGCTGGGGGCATCTTCTCCCCAGGGT...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGCTGTTCGCCCGTGTaGACTCTCCGATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGCSPV*TLRCSS
Trigger: GGAAGAGCATCGGAGAGTGCACACGGGCGAACAGCC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTACTTCCCCCTCCCGCTaGACTACGTCTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLTSPSR*TTSPRM
Trigger: CATCCTGGGAGACGTAGTCCAGCGGGAGGGGGAAGT...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTTGGAGCGTACCTCTaGACGCAGCCACTGGCGACA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLGAYL*TQPLAT
Trigger: TGTCGCCAGTGGCTGCGTCCAGAGGTACGCTCCAAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGTGGGTACAGACTCCTaGGTGGCAGCTAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLVGTDS*VAARGP
Trigger: TGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCAC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCATGCCACAGGGCCCTaGGGTGCTCCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRHATGP*GAPSMR
Trigger: CCTCATGGAGGGAGCACCCCAGGGCCCTGTGGCATG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAAGGGCTTACACTACCTaGACCTGCGGAGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGRAYTT*TCGDAA
Trigger: GGCAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCT...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGATCGCGGGAGGGTGATTaGATCTGGCCAGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGSREGD*IWPERP
Trigger: TGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGA...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAAGGGATCCTCGTCCGTaGGGTCCTGTTCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGRDPRP*GPVHSS
Trigger: TGAGGAGTGAACAGGACCCCACGGACGAGGATCCCT...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCCCGTGTGTACCGCCTaGTGCTCCAGCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCPVCTA*CSSSTA
Trigger: CGCCGTGCTGCTGGAGCACCAGGCGGTACACACGGG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTGCAGGCCCAGTGGTaGTTCCTGCATAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLQAQW*FLHSPR
Trigger: CCTAGGACTATGCAGGAATCACCACTGGGCCTGCAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTACCTTCGCGGGAGGGTaGTTGGATCTGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLTFAGG*LDLARK
Trigger: CTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGT...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCTCATCTTCTGGGGGTaGTCGGTCTGGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRLIFWG*SVWGAQ
Trigger: CTGGGCTCCCCAGACCGAGCACCCCCAGAAGATGAG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGACTCCTCTTTCACCTaGAGGCCCAGTGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGDSSFT*RPSGDS
Trigger: GGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACCTCAGGCCCAGTCTTaGTGTGGGGAAAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGPQAQS*CGERSG
Trigger: ACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCAGAAAGGCCAGCCATaGCGAGGTCCCAGGGGACGT +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRQKGQP*RGPRGR
Trigger: ACGTCCCCTGGGACCTCGGCATGGCTGGCCTTTCTG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAGTGTGGATCTTCTGGTaGCTCAGCAGGTTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGVWIFW*LSRLLR
Trigger: ACGCAGCAACCTGCTGAGGCACCAGAAGATCCACAC...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGCGGCCGCACTCGCTaGACACGAATGGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRCGRTR*TRMVAH
Trigger: GTGAGCGACCATTCGTGTGCAGCGAGTGCGGCCGCA...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTACGCGGAGATGCTaGGTGAGCGTAGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRCTRRC*VSVGRW
Trigger: CCAGCGGCCTACGCTCACGCAGCATCTCCGCGTACA...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGTGTGTACGCGGAGATaGTGCGTGAGCGTAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRVCTRR*CVSVGR
Trigger: GCGGCCTACGCTCACGCAGCATCTCCGCGTACACAC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTGTGGATGCGCTGGTaGTCGGTGAGCCGCGAGACC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVWMRW*SVSRET
Trigger: GGTCTCGCGGCTCACCGAGCACCAGCGCATCCACAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGTACAGACTCCTGGGTaGCAGCTAGAGGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLVQTPG*QLEAQT
Trigger: AGTCTGGGCCTCTAGCTGCCACCCAGGAGTCTGTAC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGCCCAGTCTTGCTGTaGGGAAAGATCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGPVLL*GKIWSS
Trigger: GCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCATGCCACAGGGCCCTaGGGTGCTCCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCHATGP*GAPSMR
Trigger: CCTCATGGAGGGAGCACCCCAGGGCCCTGTGGCATG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTCGCGGGAGGGTGATTaGATCTGGCCAGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLSREGD*IWPERP
Trigger: TGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTCGCTGCACACGAATaGTCGCTCACCCGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLAAHE*SLTRVD
Trigger: ATCCACACGGGTGAGCGACCATTCGTGTGCAGCGAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCTCTAGCTTCACCATaGCAGGCCCCTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPLASP*QAPHLL
Trigger: CAGAAGATGAGGGGCCTGTCATGGTGAAGCTAGAGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCTACGTCTCCCAGGATaGTCCGCGCACCAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCLRLPG*SAHQLE
Trigger: CTCGAGCTGGTGCGCGGAGCATCCTGGGAGACGTAG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGACCTGCGGAGATGCTaGCTAGCTGCAGCGCGAACC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCDLRRC*LAAART
Trigger: GGTTCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTGTGCACTCTCCGATaGTCTTCCAGGCGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVCTLR*SSRRAL
Trigger: CAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGGCTGTTCGCCCGTGTaGACTCTCCGATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRGCSPV*TLRCSS
Trigger: GGAAGAGCATCGGAGAGTGCACACGGGCGAACAGCC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTGTGTACGCGGAGATaGTGCGTGAGCGTAGGCCGC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVCTRR*CVSVGR
Trigger: GCGGCCTACGCTCACGCAGCATCTCCGCGTACACAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTGGGTGAGGTTGGCGTaGTGCCGAAAGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCWVRLA*CRKLWP
Trigger: CGGCCAGAGCTTTCGGCAGCACGCCAACCTCACCCA...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGACTTCCCCCTCCCGCTaGACTACGTCTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRTSPSR*TTSPRM
Trigger: CATCCTGGGAGACGTAGTCCAGCGGGAGGGGGAAGT...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCTTGGAGCGTACCTCTaGACGCAGCCACTGGCGACA +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRLGAYL*TQPLAT
Trigger: TGTCGCCAGTGGCTGCGTCCAGAGGTACGCTCCAAG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCCTGGCCCTGCACCTaGACTGTGACCCATCTCCGG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCSWPCT*TVTHLR
Trigger: CCGGAGATGGGTCACAGTCCAGGTGCAGGGCCAGGA...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCCTCAGGCAGGAGGGTaGGTACAGACTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCPQAGG*VQTPGW
Trigger: CCACCCAGGAGTCTGTACCCACCCTCCTGCCTGAGG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTACGGTCCCACATCTCTaGGCCTCCTCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCTVPHL*ASSGRR
Trigger: CCTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCGT...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCACTCCTCAGATCGCTaGGGAGCAGAAGCGCATGCG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRHSSDR*GAEAHA
Trigger: CGCATGCGCTTCTGCTCCCCAGCGATCTGAGGAGTG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTGAGCTTGAGGCGCTaGCTGAAGCGCTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVSLRR*LKRWPH
Trigger: GTGTGGCCAGCGCTTCAGCCAGCGCCTCAAGCTCAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTACCAGGTCAGGTATCTaGGGCCAGTGTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCTRSGI*GQCLPL
Trigger: GAGGGGCAGACACTGGCCTCAGATACCTGACCTGGT...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR TCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCTGCAGGCCCAGTGGTaGTTCCTGCATAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRLQAQW*FLHSPR
Trigger: CCTAGGACTATGCAGGAATCACCACTGGGCCTGCAG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCAGGGGACGTGGAGGTaGGGGCTTACACTACCTGGA +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCQGTWR*GLTLPG
Trigger: TCCAGGTAGTGTAAGCCCTCACCTCCACGTCCCCTG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR TCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGGTTGCTGCGTTGGCTaGACACCTTGCCACATACAT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLGCCVG*TPCHIH
Trigger: ATGTATGTGGCAAGGTGTTCAGCCAACGCAGCAACC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCGCGCTGGTGCTGAATaGGCTTGGTGCTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCRAGAE*AWCSGG
Trigger: TCCACCAGAGCACCAAGCTCATTCAGCACCAGCGCG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGACCAGGTCAGGTATCTaGGGCCAGTGTCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRTRSGI*GQCLPF
Trigger: GAAGGGCAGACACTGGCCTCAGATACCTGACCTGGT...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR GCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCCCAGTGGTGATTCCTaGATAGTCCTAGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLPSGDS*IVLGGV
Trigger: GACACCTCCTAGGACTATGCAGGAATCACCACTGGG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGAAGATTAGCAGGATCCTaGACCAATCACGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: VIASLTITRGGRCSDHGGRLAGS*TNHGRH
Trigger: ATGACGGCCGTGATTGGTGCAGGATCCTGCTAATCT...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTCTGAGGCCAGTGTCTaGCCTTCTCTACGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRSEASV*PSLRAF
Trigger: GAAGGCCCGTAGAGAAGGGCAGACACTGGCCTCAGA...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR CCA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTAGCAGGTTGCTGCGTTaGCTGAACACCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLSRLLR*LNTLPH
Trigger: ATGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCT...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGCTCGCTGCACACGAATaGTCGCTCACCCGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRLAAHE*SLTRVD
Trigger: ATCCACACGGGTGAGCGACCATTCGTGTGCAGCGAG...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTATGAGCTTGGTGCTCTaGTGGAAGCGGCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCMSLVL*WKRRPQ
Trigger: CTGTGGCCGCCGCTTCCACCAGAGCACCAAGCTCAT...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTATCCGTGCGTCGGCATaGGCAAGCCTCTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCIRASA*ASLSGT
Trigger: TGTACCTGAGAGGCTTGCGCATGCCGACGCACGGAT...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215057.7
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGGCCCAGTCTTGCTGTaGGGAAAGATCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCGPVLL*GKIWSS
Trigger: GCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCTCGCTGCACACGAATaGTCGCTCACCCGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCLAAHE*SLTRVD
Trigger: ATCCACACGGGTGAGCGACCATTCGTGTGCAGCGAG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCCTCTAGCTTCACCATaGCAGGCCCCTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCPLASP*QAPHLL
Trigger: CAGAAGATGAGGGGCCTGTCATGGTGAAGCTAGAGG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR TCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGTCCTCTGTAACCTCTaGCTCCTCTTTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRVLCNL*LLFHLQ
Trigger: CTGCAGGTGAAAGAGGAGTCAGAGGTTACAGAGGAC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGACTCCTCTTTCACCTaGAGGCCCAGTGGTGATTCC +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCDSSFT*RPSGDS
Trigger: GGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGAAAGGCTTGGCCCGATaGTTTCCGGCAGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRKGLAR*FPADVV
Trigger: GACTACATCTGCCGGAAAGCATCGGGCCAAGCCTTT...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTAGGGGCTGGAAACTaGAGGGCTCCATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVGAGN*RAPSSL
Trigger: CAGAGAAGATGGAGCCCTCCAGTTTCCAGCCCCTAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGAGGGTGATTGGATCTaGCCAGAAAGGCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCEGDWI*PERPAM
Trigger: CATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS-3UTR CCA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGAAATGGAGAAAGGCTTaGCCCGATGCTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPAYTYVIASLTITRGGRKWRKA*PDAFRQ
Trigger: CTGCCGGAAAGCATCGGGCCAAGCCTTTCTCCATTT...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR TCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTCCTCTGTAACCTCTaGCTCCTCTTTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVLCNL*LLFHLQ
Trigger: CTGCAGGTGAAAGAGGAGTCAGAGGTTACAGAGGAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR GCA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTACAGGAAGGGGCCTCTaGTACTTCCTAGACCGCAAA +
Preference number: 4 (lower is better)
Translates to: PAYTYVIASLTITRGGRCTGRGL*YFLDRK
Trigger: TTTGCGGTCTAGGAAGTAGCAGAGGCCCCTTCCTGT...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR CAA 90 bp GCAGCACGGCGCGCCGCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCTGGGCCAGGGCCTCTaGGGGCCCTGTGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: AARRAARSSRGTRCTERGLGQGL*GPCGLL
Trigger: GAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCAG...GCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGCGGCGCGCCGTGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS TCA 90 bp GGCCAGTGTCTGCCCCTCTGCGCTCAGCGGGCCGCTCCGCGCTCCTaGGCACGCGCAGTCTTCGACTTCCCCCTCCCGCTGGACTACGTC +
Preference number: 5 (lower is better)
Translates to: GQCLPLCAQRAAPRS*ARAVFDFPLPLDYV
Trigger: GACGTAGTCCAGCGGGAGGGGGAAGTCGAAGACTGCGCGTGCTCAGGAGCGCGGAGCGGCCCGCTGAGCGCAGAGGGGCAGACACTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS GCA 90 bp CGCAGTCTTCGACTTCCCCCTCCCGCTGGACTACGTCTCCCAGGATaGTCCGCGCACCAGCTCGAGCGCCTCCTTGCCCTTCCCCCACCC +
Preference number: 5 (lower is better)
Translates to: RSLRLPPPAGLRLPG*SAHQLERLLALPPP
Trigger: GGGTGGGGGAAGGGCAAGGAGGCGCTCGAGCTGGTGCGCGGAGCATCCTGGGAGACGTAGTCCAGCGGGAGGGGGAAGTCGAAGACTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000596039.1
CDS CCA 90 bp CTCCGCGCTCCTGAGCACGCGCAGTCTTCGACTTCCCCCTCCCGCTaGACTACGTCTCCCAGGATGCTCCGCGCACCAGCTCGAGCGCCT +
Preference number: 5 (lower is better)
Translates to: LRAPEHAQSSTSPSR*TTSPRMLRAPARAP
Trigger: AGGCGCTCGAGCTGGTGCGCGGAGCATCCTGGGAGACGTAGTCCAGCGGGAGGGGGAAGTCGAAGACTGCGCGTGCTCAGGAGCGCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000596039.1
CDS-3UTR CAA 90 bp GCGCGAAGCTCTCGCGGCACTCGCTGCACGGAAAGGGGCCGGGAGGCTCGGGCGGCCCAGGCTCTGGAGTaGGAGGCTCAGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: ARSSRGTRCTERGREARAAQALE*EAQFQV
Trigger: TACCTGAAACTGAGCCTCCAACTCCAGAGCCTGGGC...CGCCCGAGCCTCCCGGCCCCTTTCCGTGCAGCGAGTGCCGCGAGAGCTTCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS-3UTR CAA 90 bp AGGAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACTGGGCCAGGGCCTCTaGGGGCCCTGTGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RSGVGRDGAVHAEGLVPPLGQGL*GPCGLL
Trigger: GAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCAG...TGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CAA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGCGGTGCTGGGTGAGGTaGGCGTGCTGCCGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQRCWVR*ACCRKL
Trigger: GAGCTTTCGGCAGCACGCCAACCTCACCCAGCACCG...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS TCA 90 bp AGTCAACCTGAAACCCTCTGCGCTCAGCGGGCCGCTCCGCGCTCCTaGGCACGCGCAGTCTTCGACTTCCCCCTCCCGCTGGACTACGTC +
Preference number: 5 (lower is better)
Translates to: SQPETLCAQRAAPRS*ARAVFDFPLPLDYV
Trigger: GACGTAGTCCAGCGGGAGGGGGAAGTCGAAGACTGCGCGTGCTCAGGAGCGCGGAGCGGCCCGCTGAGCGCAGAGGGTTTCAGGTTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596039.1
CDS GCA 90 bp ACTACGTCTCCCAGGATGCTCCGCGCACCAGCTCGAGCGCCTCCTTaGCCTTCCCCCACCCTCGTCCCCGTTTCTACACCCTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TTSPRMLRAPARAPP*PSPTLVPVSTPSPP
Trigger: GGGAGGAGAGGGTGTAGAAACGGGGACGAGGGTGGGGGAAGGGCAAGGAGGCGCTCGAGCTGGTGCGCGGAGCATCCTGGGAGACGTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000596039.1
CDS-3UTR CAA 90 bp CATGGCGGACACAGTGCGTCCCGGCTGGAGCTACTCGGCGCTGTGGACGCGCTGCCCTCAGGCCCAGTCTaGCTGTGGGGAAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: HGGHSASRLELLGAVDALPSGPV*LWGKIW
Trigger: CCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGG...CAGCGCGTCCACAGCGCCGAGTAGCTCCAGCCGGGACGCACTGTGTCCGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS TCA 90 bp GCTGGGGAGCAGAAGCGCATGCGCAAAGCCACCTTCGCGGGAGGGTaGTTGGATCTGGCCAGAAAGGCCAGCCATGCCGAGGTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGEQKRMRKATFAGG*LDLARKASHAEVPG
Trigger: CCCTGGGACCTCGGCATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTGGCTTTGCGCATGCGCTTCTGCTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS TCA 90 bp GTGGTGCTGCCCAGGGTGAGGCCGAGCTGGATGATGCTCCAGTCCTaGACCCCACTCGTGGACACTCACTCACCCATCTCCGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: VVLPRVRPSWMMLQS*TPLVDTHSPISGVR
Trigger: GCGGACCCCGGAGATGGGTGAGTGAGTGTCCACGAGTGGGGTTCAGGACTGGAGCATCATCCAGCTCGGCCTCACCCTGGGCAGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS GCA 90 bp GGGCCCTGGGGTGCTCCCTCCATGAGGGACCCTCAGGCCCAGTCTTaGTGTGGGGAAAGATCTGGTCCAGCACGGTCCCACATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GPWGAPSMRDPQAQS*CGERSGPARSHISG
Trigger: CCCAGAGATGTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCCAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS CCA 90 bp AGGGGCTGGAAACTGGAGGGCTCCATCTTCTCTGATAGGACCTCCTaGCCCTGCACCTGGACTGTGACCCATCTCCGGGGTCCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: RGWKLEGSIFSDRTS*PCTWTVTHLRGPPG
Trigger: GCCGGGCGGACCCCGGAGATGGGTCACAGTCCAGGTGCAGGGCCAGGAGGTCCTATCAGAGAAGATGGAGCCCTCCAGTTTCCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000599369.5
CDS CCA 90 bp GGGAGCAGAAGCGCATGCGCAAAGCCACCTTCGCGGGAGGGTGATTaGATCTGGCCAGAAAGGCCAGCCATGCCGAGGTCCCAGGGGACG +
Preference number: 5 (lower is better)
Translates to: GSRSACAKPPSREGD*IWPERPAMPRSQGT
Trigger: CGTCCCCTGGGACCTCGGCATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTGGCTTTGCGCATGCGCTTCTGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS-3UTR CAA 90 bp CGTGTGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCCAGCAGGTTGCTGCGTaGGCTGAACACCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: RVHSPMLFQARAAHEALAQQVAA*AEHLAT
Trigger: TGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCTG...GGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS TCA 90 bp TGGCCAGAAAGGCCAGCCATGCCGAGGTCCCAGGGGACGTGGAGGTaGGGGCTTACACTACCTGGACCTGCGGAGATGCTGCCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: WPERPAMPRSQGTWR*GLTLPGPAEMLPSC
Trigger: GCAGCTAGGCAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCTCACCTCCACGTCCCCTGGGACCTCGGCATGGCTGGCCTTTCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS CCA 90 bp CTGGGGTGCTCCCTCCATGAGGGACCCTCAGGCCCAGTCTTGCTGTaGGGAAAGATCTGGTCCAGCACGGTCCCACATCTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGCSLHEGPSGPVLL*GKIWSSTVPHLWAS
Trigger: GGAGGCCCAGAGATGTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS CCA 90 bp AGAAGCGCATGCGCAAAGCCACCTTCGCGGGAGGGTGATTGGATCTaGCCAGAAAGGCCAGCCATGCCGAGGTCCCAGGGGACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RSACAKPPSREGDWI*PERPAMPRSQGTWR
Trigger: CCTCCACGTCCCCTGGGACCTCGGCATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTGGCTTTGCGCATGCGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS-3UTR CAA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGAGCTCGAGCGCCTCCTaGCCCTTCCCCCACCCTCGT +
Preference number: 5 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLSSSAS*PFPHPR
Trigger: ACGAGGGTGGGGGAAGGGCAAGGAGGCGCTCGAGCT...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS GCA 90 bp CACCTTCGCGGGAGGGTGATTGGATCTGGCCAGAAAGGCCAGCCATaGCGAGGTCCCAGGGGACGTGGAGGTGAGGGCTTACACTACCTG +
Preference number: 5 (lower is better)
Translates to: HLRGRVIGSGQKGQP*RGPRGRGGEGLHYL
Trigger: CAGGTAGTGTAAGCCCTCACCTCCACGTCCCCTGGGACCTCGGCATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS CCA 90 bp TCCTCCCTTCCCCTAGCGGTGGTCGCAATGATCAGGTCATACTCCTaGCCGCTTCTTCCCATGCTCCCCGCCTCGAATCCGTGCGTCGGC +
Preference number: 5 (lower is better)
Translates to: SSLPLAVVAMIRSYS*PLLPMLPASNPCVG
Trigger: GCCGACGCACGGATTCGAGGCGGGGAGCATGGGAAGAAGCGGCCAGGAGTATGACCTGATCATTGCGACCACCGCTAGGGGAAGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000596039.1
CDS CCA 90 bp CTCCATGAGGGACCCTCAGGCCCAGTCTTGCTGTGGGGAAAGATCTaGTCCAGCACGGTCCCACATCTCTGGGCCTCCTCAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LHEGPSGPVLLWGKI*SSTVPHLWASSGRR
Trigger: CCTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS-3UTR CAA 90 bp TGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCGTCCTAGGAGGTGTCTaGGGCCCAGGCTCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: WGRQRWCCPCGRPSPTTPVLGGV*GPGSGV
Trigger: AACTCCAGAGCCTGGGCCCAAGACACCTCCTAGGAC...GGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CAA 90 bp TGCACTCTCCGATGCTCTTCCAGGCGCGCGCTGCGCACGAAGCCCTGGCCACAGCGTTGGCTGAACACCTaGCCACATACATCGCAACGG +
Preference number: 5 (lower is better)
Translates to: CTLRCSSRRALRTKPWPQRWLNT*PHTSQR
Trigger: CCGTTGCGATGTATGTGGCAAGGTGTTCAGCCAACG...CTGTGGCCAGGGCTTCGTGCGCAGCGCGCGCCTGGAAGAGCATCGGAGAGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594234.5
CDS TCA 90 bp GGGGTGGGTATCTACAGAGGAGAGAAGTGGGTCCCAGCCACACTGTaGGCACTCCAGCGTCAGACGCTGGGTGAAGGAGGAGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: GVGIYRGEKWVPATL*ALQRQTLGEGGGTS
Trigger: GCTGGTGCCTCCTCCTTCACCCAGCGTCTGACGCTGGAGTGCTCACAGTGTGGCTGGGACCCACTTCTCTCCTCTGTAGATACCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 90 bp AGCAGGATCCTGCACCAATCACGGCCGTCATTAGAACTCCGTCGGTaGCCCACCGCGTCTCCATGGCAACTCCCTACAGGAAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SRILHQSRPSLELRR*PTASPWQLPTGRGL
Trigger: GAGGCCCCTTCCTGTAGGGAGTTGCCATGGAGACGCGGTGGGGCACCGACGGAGTTCTAATGACGGCCGTGATTGGTGCAGGATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS CCA 90 bp ATGCAGGAATGGGCTGGGGAGTCTGGCCCTGGAATCCCTCTGCCCTaGGCAGCCTTGCACAGGGTCTCTGTTGCAGGTGGCCACTTCTGT +
Preference number: 5 (lower is better)
Translates to: MQEWAGESGPGIPLP*AALHRVSVAGGHFC
Trigger: ACAGAAGTGGCCACCTGCAACAGAGACCCTGTGCAAGGCTGCCCAGGGCAGAGGGATTCCAGGGCCAGACTCCCCAGCCCATTCCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS CCA 90 bp TCACGGCCGTCATTAGAACTCCGTCGGTGCCCCACCGCGTCTCCATaGCAACTCCCTACAGGAAGGGGCCTCTGCTACTTCCTAGACCGC +
Preference number: 5 (lower is better)
Translates to: SRPSLELRRCPTASP*QLPTGRGLCYFLDR
Trigger: GCGGTCTAGGAAGTAGCAGAGGCCCCTTCCTGTAGGGAGTTGCCATGGAGACGCGGTGGGGCACCGACGGAGTTCTAATGACGGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCTGGGCCAGGGCCTCTaGGGGCCCTGTGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLLGQGL*GPCGLL
Trigger: GAGGAGGCCACAGGGCCCCAAGAGGCCCTGGCCCAG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp GTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATCCCCTCAGGCCCAGTCTaGCTGTGGGGAAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: VGRDGAVHAEGLVPPHPIPSGPV*LWGKIW
Trigger: CCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGG...GATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS GCA 90 bp GTGGGGTCCTGTTCACTCCTCAGATCGCTGGGGAGCAGAAGCGCATaGGCAAAGCCACCTTCGCGGGAGGGTGATTGGATCTGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VGSCSLLRSLGSRSA*AKPPSREGDWIWPE
Trigger: TTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTGGCTTTGCGCATGCGCTTCTGCTCCCCAGCGATCTGAGGAGTGAACAGGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS-3UTR CAA 90 bp GGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACACCCCATGCCCAGGCTCTGGAGTaGGAGGCTCAGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GRQRWCCPCGRPSPTTPHAQALE*EAQFQV
Trigger: TACCTGAAACTGAGCCTCCAACTCCAGAGCCTGGGC...ATGGGGTGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS-3UTR CAA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCCCTCAGGCCCAGTCTaGCTGTGGGGAAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLPSGPV*LWGKIW
Trigger: CCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGTGGTGCCTCAGCAGGTaGCTGCGTTGGCTGAACACC +
Preference number: 5 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLWCLSR*LRWLNT
Trigger: GGTGTTCAGCCAACGCAGCAACCTGCTGAGGCACCA...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS TCA 90 bp CCATATTCCCCTAGCCTGCAGCTCCTATGTCCACGTGACTGCAGGTaGTGCAGGAATGGGCTGGGGAGTCTGGCCCTGGAATCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PYSPSLQLLCPRDCR*CRNGLGSLALESLC
Trigger: GCAGAGGGATTCCAGGGCCAGACTCCCCAGCCCATTCCTGCATCACCTGCAGTCACGTGGACATAGGAGCTGCAGGCTAGGGGAATATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTAGCTCGAGCGCCTCCTaGCCCTTCCCCCACCCTCGT +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLSSSAS*PFPHPR
Trigger: ACGAGGGTGGGGGAAGGGCAAGGAGGCGCTCGAGCT...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS-3UTR CAA 90 bp ATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACACAGTGCGTCCCGGCTGCAGCAGGTTGCTGCGTaGGCTGAACACCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: ITRGGRCSDHGGHSASRLQQVAA*AEHLAT
Trigger: TGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCTG...CAGCCGGGACGCACTGTGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp GAGTGGGGTCGGCAGAGATGGTGCTGTCCATGCGGAAGGCCTAGTCCCACCACAAACCCTGGGAGAGACTaGGGTCATAGCCAAGATGGC +
Preference number: 5 (lower is better)
Translates to: EWGRQRWCCPCGRPSPTTNPGRD*GHSQDG
Trigger: GCCATCTTGGCTATGACCCAAGTCTCTCCCAGGGTT...TGTGGTGGGACTAGGCCTTCCGCATGGACAGCACCATCTCTGCCGACCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS TCA 90 bp CAGCGTCAGACGCTGGGTGAAGGAGGAGGCACCAGCAACTCCAACTaGGAATCAGGGCCTGGAGAAGGCGGAAGCCTGGAGGAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: QRQTLGEGGGTSNSN*ESGPGEGGSLEEVK
Trigger: TTTAACCTCCTCCAGGCTTCCGCCTTCTCCAGGCCCTGATTCTCAGTTGGAGTTGCTGGTGCCTCCTCCTTCACCCAGCGTCTGACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 90 bp GCGCGAACCCTGCATACACAAGGGGACCATTCATTCATGACAGAATaGCCACCGTGCCGGGACCCACTTCATCCCTGGGGACACAGTGTG +
Preference number: 5 (lower is better)
Translates to: ARTLHTQGDHSFMTE*PPCRDPLHPWGHSV
Trigger: CACACTGTGTCCCCAGGGATGAAGTGGGTCCCGGCACGGTGGGCATTCTGTCATGAATGAATGGTCCCCTTGTGTATGCAGGGTTCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 90 bp ACACCACATGCCATCTGTACTGGGAAACCCCAACAGCCTGCTCCATaGCATGGGGTTCGTGGGTACAGGGCTGTGGCAGTCAGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: TPHAICTGKPQQPAP*HGVRGYRAVAVRLG
Trigger: ACCAAGCCTGACTGCCACAGCCCTGTACCCACGAACCCCATGGCATGGAGCAGGCTGTTGGGGTTTCCCAGTACAGATGGCATGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS GCA 90 bp GGACTGAACACCACATGCCATCTGTACTGGGAAACCCCAACAGCCTaGTCCATGCCATGGGGTTCGTGGGTACAGGGCTGTGGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: GLNTTCHLYWETPTA*SMPWGSWVQGCGSQ
Trigger: CTGACTGCCACAGCCCTGTACCCACGAACCCCATGGCATGGAGCAGGCTGTTGGGGTTTCCCAGTACAGATGGCATGTGGTGTTCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 90 bp ATCATTCCCCCGTGGGTGGCATCGATTTCGAGGGCCGCCTCATCCTaGGGGCCAAGCCTCCACTCTTCAAGGTGCCAAGTCAACCTGAAA +
Preference number: 5 (lower is better)
Translates to: IIPPWVASISRAASS*GPSLHSSRCQVNLK
Trigger: TTTCAGGTTGACTTGGCACCTTGAAGAGTGGAGGCTTGGCCCCCAGGATGAGGCGGCCCTCGAAATCGATGCCACCCACGGGGGAATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594108.1
ENST00000596039.1
ENST00000600048.1
CDS CCA 90 bp ACATGCCATCTGTACTGGGAAACCCCAACAGCCTGCTCCATGCCATaGGGTTCGTGGGTACAGGGCTGTGGCAGTCAGGCTTGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: TCHLYWETPTACSMP*GSWVQGCGSQAWCV
Trigger: CACACACCAAGCCTGACTGCCACAGCCCTGTACCCACGAACCCCATGGCATGGAGCAGGCTGTTGGGGTTTCCCAGTACAGATGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCGGTGCTGGGTGAGGTaGGCGTGCTGCCGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLRCWVR*ACCRKL
Trigger: GAGCTTTCGGCAGCACGCCAACCTCACCCAGCACCG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS GCA 90 bp GTCCACATAGGAATGGCAGGGTGTGAGCAGCTAGTTCAGGTGCCCTaGCTGGGAGGTGAAAGGGGTCATACCCCTAACACTACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VHIGMAGCEQLVQVP*LGGERGHTPNTTRS
Trigger: GGACCTCGTAGTGTTAGGGGTATGACCCCTTTCACCTCCCAGGCAGGGCACCTGAACTAGCTGCTCACACCCTGCCATTCCTATGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 90 bp ATCTCTGGGCCTCCTCAGGCAGGAGGGTGGGTACAGACTCCTGGGTaGCAGCTAGAGGCCCAGACTCCAGGAAATCTAGAGAGGAAAACT +
Preference number: 5 (lower is better)
Translates to: ISGPPQAGGWVQTPG*QLEAQTPGNLERKT
Trigger: AGTTTTCCTCTCTAGATTTCCTGGAGTCTGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCACCCTCCTGCCTGAGGAGGCCCAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 90 bp GACCAGCAGGATGCAAGCCCAGGAGGCCATCCAGGATACCAGGACTaGGAGAGAATGTGGGTACGGGGAATACTCGCCCTGCTTGCAAAA +
Preference number: 5 (lower is better)
Translates to: DQQDASPGGHPGYQD*ERMWVRGILALLAK
Trigger: TTTTGCAAGCAGGGCGAGTATTCCCCGTACCCACATTCTCTCCCAGTCCTGGTATCCTGGATGGCCTCCTGGGCTTGCATCCTGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 90 bp GCTGTTCCTTCTGCAGCTGCGGCTTTAGGAAGGAATCTGCGTTTATaGAGGGGATGGCACCGCAGAATCATTCCCCCGTGGGTGGCATCG +
Preference number: 5 (lower is better)
Translates to: AVPSAAAALGRNLRL*RGWHRRIIPPWVAS
Trigger: CGATGCCACCCACGGGGGAATGATTCTGCGGTGCCATCCCCTTCATAAACGCAGATTCCTTCCTAAAGCCGCAGCTGCAGAAGGAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594108.1
ENST00000596039.1
ENST00000600048.1
CDS GCA 90 bp GTAACCTCTGACTCCTCTTTCACCTGCAGGCCCAGTGGTGATTCCTaGATAGTCCTAGGAGGTGTCTTGGGCCCAGGCTCTGGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: VTSDSSFTCRPSGDS*IVLGGVLGPGSGVG
Trigger: TCCAACTCCAGAGCCTGGGCCCAAGACACCTCCTAGGACTATGCAGGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTCAGAGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
ENST00000600048.1
CDS GCA 90 bp TCTGACATCGTGGCCTTCCAGTACCTTCCCCATATTCCCCTAGCCTaGAGCTCCTATGTCCACGTGACTGCAGGTGATGCAGGAATGGGC +
Preference number: 5 (lower is better)
Translates to: SDIVAFQYLPHIPLA*SSYVHVTAGDAGMG
Trigger: GCCCATTCCTGCATCACCTGCAGTCACGTGGACATAGGAGCTGCAGGCTAGGGGAATATGGGGAAGGTACTGGAAGGCCACGATGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS CCA 90 bp ATGAGATGGGCTGAGGTTTGTGCCCCTGTAGCCGTATGTGAACCATaGGGCAAGGTGGTCAGCGGGGGTCAGAGGTATTGTACAAGGGTC +
Preference number: 5 (lower is better)
Translates to: MRWAEVCAPVAVCEP*GKVVSGGQRYCTRV
Trigger: GACCCTTGTACAATACCTCTGACCCCCGCTGACCACCTTGCCCCATGGTTCACATACGGCTACAGGGGCACAAACCTCAGCCCATCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 90 bp AGGAGGTTGAACCTTATAGGGGATGATCTAGGGAATGGGGGAACTTaGGGATGCTGGAGTAAGAGGGCTGCCTGCGTAGGGCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: RRLNLIGDDLGNGGT*GCWSKRAACVGPGV
Trigger: CACTCCTGGCCCTACGCAGGCAGCCCTCTTACTCCAGCATCCCCAAGTTCCCCCATTCCCTAGATCATCCCCTATAAGGTTCAACCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTGTCCTAGGAGGTGTCTaGGGCCCAGGCTCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLVLGGV*GPGSGV
Trigger: AACTCCAGAGCCTGGGCCCAAGACACCTCCTAGGAC...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTTGGTGCCTCAGCAGGTaGCTGCGTTGGCTGAACACC +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLWCLSR*LRWLNT
Trigger: GGTGTTCAGCCAACGCAGCAACCTGCTGAGGCACCA...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS GCA 90 bp CTCTGCTACTTCCTAGACCGCAAAATGGAGAAAGGCTTGGCCCGATaGTTTCCGGCAGATGTAGTCAGCAGGCCCTTCGTGTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: LCYFLDRKMEKGLAR*FPADVVSRPFVCTC
Trigger: GCACGTACACACGAAGGGCCTGCTGACTACATCTGCCGGAAAGCATCGGGCCAAGCCTTTCTCCATTTTGCGGTCTAGGAAGTAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS GCA 90 bp CTGCATACACAAGGGGACCATTCATTCATGACAGAATGCCCACCGTaGCGGGACCCACTTCATCCCTGGGGACACAGTGTGAACTACAGG +
Preference number: 5 (lower is better)
Translates to: LHTQGDHSFMTECPP*RDPLHPWGHSVNYR
Trigger: CCTGTAGTTCACACTGTGTCCCCAGGGATGAAGTGGGTCCCGGCACGGTGGGCATTCTGTCATGAATGAATGGTCCCCTTGTGTATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS-3UTR CAA 90 bp GTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTTCTGACCATGGCGGACGTTGGCTGAACACCTaGCCACATACATCGCAACGG +
Preference number: 5 (lower is better)
Translates to: VIASLTITRGGRCSDHGGRWLNT*PHTSQR
Trigger: CCGTTGCGATGTATGTGGCAAGGTGTTCAGCCAACG...TCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCAGCAGGTTGCTGCGTaGGCTGAACACCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLQQVAA*AEHLAT
Trigger: TGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCTG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTCGGTGCTGGGTGAGGTaGGCGTGCTGCCGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PAYTYVIASLTITRGGRCRCWVR*ACCRKL
Trigger: GAGCTTTCGGCAGCACGCCAACCTCACCCAGCACCG...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS CCA 90 bp GCATTGTCTAGGTGGAAAATGATGGTCTCAGCAAATGCAGGGAAGTaGGTGGGTCTCGGAGGCTGGAGGTGGAGCCAACAGAAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: ALSRWKMMVSANAGK*VGLGGWRWSQQKEG
Trigger: ACCCTCTTTCTGTTGGCTCCACCTCCAGCCTCCGAGACCCACCCACTTCCCTGCATTTGCTGAGACCATCATTTTCCACCTAGACAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 90 bp TCATTCATGACAGAATGCCCACCGTGCCGGGACCCACTTCATCCCTaGGGACACAGTGTGAACTACAGGGACCTGAAACTGACCAAAGAG +
Preference number: 5 (lower is better)
Translates to: SFMTECPPCRDPLHP*GHSVNYRDLKLTKE
Trigger: CTCTTTGGTCAGTTTCAGGTCCCTGTAGTTCACACTGTGTCCCCAGGGATGAAGTGGGTCCCGGCACGGTGGGCATTCTGTCATGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS-3UTR CAA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGTCCTAGGAGGTGTCTaGGGCCCAGGCTCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: GPAYTYVIASLTITRGGRVLGGV*GPGSGV
Trigger: AACTCCAGAGCCTGGGCCCAAGACACCTCCTAGGAC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTCGTTGGCTGAACACCTaGCCACATACATCGCAACGG +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLRWLNT*PHTSQR
Trigger: CCGTTGCGATGTATGTGGCAAGGTGTTCAGCCAACG...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS GCA 90 bp AAGCACATATTGCCTAACGCATCTCCTTGGGGACTGAACACCACATaGCATCTGTACTGGGAAACCCCAACAGCCTGCTCCATGCCATGG +
Preference number: 5 (lower is better)
Translates to: KHILPNASPWGLNTT*HLYWETPTACSMPW
Trigger: CCATGGCATGGAGCAGGCTGTTGGGGTTTCCCAGTACAGATGGCATGTGGTGTTCAGTCCCCAAGGAGATGCGTTAGGCAATATGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS-3UTR CAA 90 bp GGACCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGGCCCAGGCTCTGGAGTaGGAGGCTCAGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GPAYTYVIASLTITRGGRAQALE*EAQFQV
Trigger: TACCTGAAACTGAGCCTCCAACTCCAGAGCCTGGGC...CCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGTCCTAGGAGGTGTCTaGGGCCCAGGCTCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PAYTYVIASLTITRGGRCVLGGV*GPGSGV
Trigger: AACTCCAGAGCCTGGGCCCAAGACACCTCCTAGGAC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS-3UTR CAA 90 bp CCATCTACTGTTTATTGGACACCTACAGTAGCCAAGCCCTGGGCGGACCTGCTTAAAATGGAGAAAGGCTaGGCCCGATGCTTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: PSTVYWTPTVAKPWADLLKMEKG*ARCFPA
Trigger: TGCCGGAAAGCATCGGGCCAAGCCTTTCTCCATTTT...AAGCAGGTCCGCCCAGGGCTTGGCTACTGTAGGTGTCCAATAAACAGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS GCA 90 bp TACAGGGACCTGAAACTGACCAAAGAGGCAGACGGAGGCGACAAATaGAGGGGTAGGGATTCTATCTGTACAGACTTCCCTGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: YRDLKLTKEADGGDK*RGRDSICTDFPDEV
Trigger: CACCTCATCAGGGAAGTCTGTACAGATAGAATCCCTACCCCTGCATTTGTCGCCTCCGTCTGCCTCTTTGGTCAGTTTCAGGTCCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS-3UTR CAA 90 bp CCTGCTTATACTTATGTAATCGCCAGCCTCACAATAACCAGGGGAGGTAGGTGTGCCCAGGCTCTGGAGTaGGAGGCTCAGTTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PAYTYVIASLTITRGGRCAQALE*EAQFQV
Trigger: TACCTGAAACTGAGCCTCCAACTCCAGAGCCTGGGC...ACACCTACCTCCCCTGGTTATTGTGAGGCTGGCGATTACATAAGTATAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
CDS GCA 90 bp ACACTACGAGGTCCTCCCTCAGCAGCTCCTAATTATACCTCTGCCTaGTGTCTGTTCCCCAGTGACAAGCACATATTGCCTAACGCATCT +
Preference number: 5 (lower is better)
Translates to: TLRGPPSAAPNYTSA*CLFPSDKHILPNAS
Trigger: AGATGCGTTAGGCAATATGTGCTTGTCACTGGGGAACAGACAGCAGGCAGAGGTATAATTAGGAGCTGCTGAGGGAGGACCTCGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 90 bp TGTCTGTTCCCCAGTGACAAGCACATATTGCCTAACGCATCTCCTTaGGGACTGAACACCACATGCCATCTGTACTGGGAAACCCCAACA +
Preference number: 5 (lower is better)
Translates to: CLFPSDKHILPNASP*GLNTTCHLYWETPT
Trigger: TGTTGGGGTTTCCCAGTACAGATGGCATGTGGTGTTCAGTCCCCAAGGAGATGCGTTAGGCAATATGTGCTTGTCACTGGGGAACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS GCA 72 bp CGACTTCCCCCTCCCGCTGGACTACGTCTCCCAGGATaGTCCGCGCACCAGCTCGAGCGCCTCCTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: RLPPPAGLRLPG*SAHQLERLLAL
Trigger: AAGGGCAAGGAGGCGCTCGAGCTGGTGCGCGGAGCATCCTGGGAGACGTAGTCCAGCGGGAGGGGGAAGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000596039.1
CDS CCA 72 bp CCTGAGCACGCGCAGTCTTCGACTTCCCCCTCCCGCTaGACTACGTCTCCCAGGATGCTCCGCGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: PEHAQSSTSPSR*TTSPRMLRAPA
Trigger: AGCTGGTGCGCGGAGCATCCTGGGAGACGTAGTCCAGCGGGAGGGGGAAGTCGAAGACTGCGCGTGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000596039.1
CDS CCA 72 bp CGGTCCCACATCTCTGGGCCTCCTCAGGCAGGAGGGTaGGTACAGACTCCTGGGTGGCAGCTAGAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: RSHISGPPQAGG*VQTPGWQLEAQ
Trigger: CTGGGCCTCTAGCTGCCACCCAGGAGTCTGTACCCACCCTCCTGCCTGAGGAGGCCCAGAGATGTGGGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
ENST00000600048.1
CDS CCA 72 bp TGGGCTGGGGAGTCTGGCCCTGGAATCCCTCTGCCCTaGGCAGCCTTGCACAGGGTCTCTGTTGCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: WAGESGPGIPLP*AALHRVSVAGG
Trigger: GCCACCTGCAACAGAGACCCTGTGCAAGGCTGCCCAGGGCAGAGGGATTCCAGGGCCAGACTCCCCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS TCA 72 bp ACCGCAGGCCTCATAGAGGGTACCAGGTCAGGTATCTaGGGCCAGTGTCTGCCCCTCTGCGCTCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: TAGLIEGTRSGI*GQCLPLCAQRA
Trigger: GGCCCGCTGAGCGCAGAGGGGCAGACACTGGCCTCAGATACCTGACCTGGTACCCTCTATGAGGCCTGCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000594234.5
CDS TCA 72 bp AGGCCAGCCATGCCGAGGTCCCAGGGGACGTGGAGGTaGGGGCTTACACTACCTGGACCTGCGGAGATGCTG +
Preference number: 6 (lower is better)
Translates to: RPAMPRSQGTWR*GLTLPGPAEML
Trigger: CAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCTCACCTCCACGTCCCCTGGGACCTCGGCATGGCTGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS TCA 72 bp CGTGGGTACAGGGCTGTGGCAGTCAGGCTTGGTGTGTaGGGGGTAGTGACAGCACTGGCTGCGGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: RGYRAVAVRLGV*GVVTALAAVEG
Trigger: CCCCTCCACCGCAGCCAGTGCTGTCACTACCCCTCACACACCAAGCCTGACTGCCACAGCCCTGTACCCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 72 bp TGCGCAAAGCCACCTTCGCGGGAGGGTGATTGGATCTaGCCAGAAAGGCCAGCCATGCCGAGGTCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: CAKPPSREGDWI*PERPAMPRSQG
Trigger: CCCCTGGGACCTCGGCATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTGGCTTTGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS CAA 90 bp AGGGCCCTGGGGTGCTCCCTCCATGAGGGACCCTCAGGCCCAGTCTaGCTGTGGGGAAAGATCTGGTCCAGCACGGTCCCACATCTCTGG +
Preference number: 6 (lower is better)
Translates to: RALGCSLHEGPSGPV*LWGKIWSSTVPHLW
Trigger: CCAGAGATGTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCCCAGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS GCA 72 bp TTCCCATGCTCCCCGCCTCGAATCCGTGCGTCGGCATaGGCAAGCCTCTCAGGTACAACAGACGGCAGCACC +
Preference number: 6 (lower is better)
Translates to: FPCSPPRIRASA*ASLSGTTDGST
Trigger: GGTGCTGCCGTCTGTTGTACCTGAGAGGCTTGCGCATGCCGACGCACGGATTCGAGGCGGGGAGCATGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215057.7
CDS GCA 72 bp GGTGCTCCCTCCATGAGGGACCCTCAGGCCCAGTCTTaGTGTGGGGAAAGATCTGGTCCAGCACGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: GAPSMRDPQAQS*CGERSGPARSH
Trigger: GTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS GCA 72 bp AGGAATGGGCTGGGGAGTCTGGCCCTGGAATCCCTCTaGCCTGGGCAGCCTTGCACAGGGTCTCTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: RNGLGSLALESL*PGQPCTGSLLQ
Trigger: CTGCAACAGAGACCCTGTGCAAGGCTGCCCAGGGCAGAGGGATTCCAGGGCCAGACTCCCCAGCCCATTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS CCA 72 bp CCTCGTCCGTGGGGTCCTGTTCACTCCTCAGATCGCTaGGGAGCAGAAGCGCATGCGCAAAGCCACCTTCGC +
Preference number: 6 (lower is better)
Translates to: PRPWGPVHSSDR*GAEAHAQSHLR
Trigger: GCGAAGGTGGCTTTGCGCATGCGCTTCTGCTCCCCAGCGATCTGAGGAGTGAACAGGACCCCACGGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS CCA 72 bp CCGTGGGTGGCATCGATTTCGAGGGCCGCCTCATCCTaGGGGCCAAGCCTCCACTCTTCAAGGTGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: PWVASISRAASS*GPSLHSSRCQV
Trigger: GACTTGGCACCTTGAAGAGTGGAGGCTTGGCCCCCAGGATGAGGCGGCCCTCGAAATCGATGCCACCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594108.1
ENST00000596039.1
ENST00000600048.1
CDS CAA 72 bp GGGTGCTCCCTCCATGAGGGACCCTCAGGCCCAGTCTaGCTGTGGGGAAAGATCTGGTCCAGCACGGTCCCA +
Preference number: 6 (lower is better)
Translates to: GCSLHEGPSGPV*LWGKIWSSTVP
Trigger: TGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAGGGAGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS TCA 72 bp CAGAAGCGCATGCGCAAAGCCACCTTCGCGGGAGGGTaGTTGGATCTGGCCAGAAAGGCCAGCCATGCCGAG +
Preference number: 6 (lower is better)
Translates to: QKRMRKATFAGG*LDLARKASHAE
Trigger: CTCGGCATGGCTGGCCTTTCTGGCCAGATCCAATCACCCTCCCGCGAAGGTGGCTTTGCGCATGCGCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215057.7
ENST00000599369.5
ENST00000600004.1
CDS GCA 72 bp GGTGAGGGCTTACACTACCTGGACCTGCGGAGATGCTaGCTAGCTGCAGCGCGAACCCTGGGGAGAAGATGC +
Preference number: 6 (lower is better)
Translates to: GEGLHYLDLRRC*LAAARTLGRRC
Trigger: GCATCTTCTCCCCAGGGTTCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS GCA 72 bp GGAGGTGAGGGCTTACACTACCTGGACCTGCGGAGATaGTGCCTAGCTGCAGCGCGAACCCTGGGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GGEGLHYLDLRR*CLAAARTLGRR
Trigger: TCTTCTCCCCAGGGTTCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCTCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215057.7
ENST00000599369.5
CDS GCA 72 bp CTCCTGGCCCTGCACCTGGACTGTGACCTGGGGAGGTaGCCCCACCATCAGAAGTCCTACCAGAGAGTAAGG +
Preference number: 6 (lower is better)
Translates to: LLALHLDCDLGR*PHHQKSYQRVR
Trigger: CCTTACTCTCTGGTAGGACTTCTGATGGTGGGGGCACCTCCCCAGGTCACAGTCCAGGTGCAGGGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS CCA 72 bp GTGGCCACTTCTGTACCACAAGGGAGAACGTGTGTCTaGCAAAGCGTGGTGCTGCCCAGGGTGAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: VATSVPQGRTCV*QSVVLPRVRPS
Trigger: GCTCGGCCTCACCCTGGGCAGCACCACGCTTTGCCAGACACACGTTCTCCCTTGTGGTACAGAAGTGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS CCA 72 bp GTGACAGCACTGGCTGCGGTGGAGGGGAGACCTGACTaGGTAGAATGTGGGGGCTGCTGGCAGATGGAAACC +
Preference number: 6 (lower is better)
Translates to: VTALAAVEGRPD*VECGGCWQMET
Trigger: GGTTTCCATCTGCCAGCAGCCCCCACATTCTACCCAGTCAGGTCTCCCCTCCACCGCAGCCAGTGCTGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 72 bp CCTCACCCTCCTCCTCAGAGTCCTCTAGCTTCACCATaGCAGGCCCCTCATCTTCTGGGGGTGCTCGGTCTG +
Preference number: 6 (lower is better)
Translates to: PHPPPQSPLASP*QAPHLLGVLGL
Trigger: CAGACCGAGCACCCCCAGAAGATGAGGGGCCTGTCATGGTGAAGCTAGAGGACTCTGAGGAGGAGGGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000596039.1
ENST00000599369.5
ENST00000600048.1
CDS TCA 72 bp GGATCTTCTGGTGCCTCAGCAGGTTGCTGCGTTGGCTaGACACCTTGCCACATACATCGCAACGGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: GSSGASAGCCVG*TPCHIHRNGRP
Trigger: GGGGCGGCCGTTGCGATGTATGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCTGAGGCACCAGAAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
ENST00000600004.1
CDS TCA 72 bp ACGCTGGGTGAAGGAGGAGGCACCAGCAACTCCAACTaGGAATCAGGGCCTGGAGAAGGCGGAAGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: TLGEGGGTSNSN*ESGPGEGGSLE
Trigger: CTCCAGGCTTCCGCCTTCTCCAGGCCCTGATTCTCAGTTGGAGTTGCTGGTGCCTCCTCCTTCACCCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp CTGCACCAATCACGGCCGTCATTAGAACTCCGTCGGTaGCCCACCGCGTCTCCATGGCAACTCCCTACAGGA +
Preference number: 6 (lower is better)
Translates to: LHQSRPSLELRR*PTASPWQLPTG
Trigger: TCCTGTAGGGAGTTGCCATGGAGACGCGGTGGGGCACCGACGGAGTTCTAATGACGGCCGTGATTGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS GCA 72 bp GGTGAGGGCTTACACTACCTGGACCTGCGGAGATGCTaGCTAGCTGCAGCGCGAACCCTGCATACACAAGGG +
Preference number: 6 (lower is better)
Translates to: GEGLHYLDLRRC*LAAARTLHTQG
Trigger: CCCTTGTGTATGCAGGGTTCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp GCCATCTGTACTGGGAAACCCCAACAGCCTGCTCCATaGCATGGGGTTCGTGGGTACAGGGCTGTGGCAGTC +
Preference number: 6 (lower is better)
Translates to: AICTGKPQQPAP*HGVRGYRAVAV
Trigger: GACTGCCACAGCCCTGTACCCACGAACCCCATGGCATGGAGCAGGCTGTTGGGGTTTCCCAGTACAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 72 bp TCCCTCCATGAGGGACCCTCAGGCCCAGTCTTGCTGTaGGGAAAGATCTGGTCCAGCACGGTCCCACATCTC +
Preference number: 6 (lower is better)
Translates to: SLHEGPSGPVLL*GKIWSSTVPHL
Trigger: GAGATGTGGGACCGTGCTGGACCAGATCTTTCCCCACAGCAAGACTGGGCCTGAGGGTCCCTCATGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
CDS CCA 72 bp TCCCAGCCACACTGTGAGCACTCCAGCGTCAGACGCTaGGTGAAGGAGGAGGCACCAGCAACTCCAACTGAG +
Preference number: 6 (lower is better)
Translates to: SQPHCEHSSVRR*VKEEAPATPTE
Trigger: CTCAGTTGGAGTTGCTGGTGCCTCCTCCTTCACCCAGCGTCTGACGCTGGAGTGCTCACAGTGTGGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp TCAGCAAATGCAGGGAAGTGGGTGGGTCTCGGAGGCTaGAGGTGGAGCCAACAGAAAGAGGGTGCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SANAGKWVGLGG*RWSQQKEGAGS
Trigger: GGAGCCTGCACCCTCTTTCTGTTGGCTCCACCTCCAGCCTCCGAGACCCACCCACTTCCCTGCATTTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp GAAACCCCAACAGCCTGCTCCATGCCATGGGGTTCGTaGGTACAGGGCTGTGGCAGTCAGGCTTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: ETPTACSMPWGS*VQGCGSQAWCV
Trigger: CACACACCAAGCCTGACTGCCACAGCCCTGTACCCACGAACCCCATGGCATGGAGCAGGCTGTTGGGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 72 bp CTGTACTGGGAAACCCCAACAGCCTGCTCCATGCCATaGGGTTCGTGGGTACAGGGCTGTGGCAGTCAGGCT +
Preference number: 6 (lower is better)
Translates to: LYWETPTACSMP*GSWVQGCGSQA
Trigger: AGCCTGACTGCCACAGCCCTGTACCCACGAACCCCATGGCATGGAGCAGGCTGTTGGGGTTTCCCAGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CAA 72 bp TGGTGCCTCAGCAGGTTGCTGCGTTGGCTGAACACCTaGCCACATACATCGCAACGGCCGCCCCTAACCACC +
Preference number: 6 (lower is better)
Translates to: WCLSRLLRWLNT*PHTSQRPPLTT
Trigger: GGTGGTTAGGGGCGGCCGTTGCGATGTATGTGGCAAGGTGTTCAGCCAACGCAGCAACCTGCTGAGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215057.7
ENST00000594234.5
ENST00000599369.5
ENST00000600004.1
CDS TCA 72 bp ACCGCAGGCCTCATAGAGGGTACCAGGTCAGGTATCTaGGGCCAGTGTCTGCCCTTCTCTACGGGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: TAGLIEGTRSGI*GQCLPFSTGLP
Trigger: AGGAAGGCCCGTAGAGAAGGGCAGACACTGGCCTCAGATACCTGACCTGGTACCCTCTATGAGGCCTGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS GCA 72 bp GGAGGTGAGGGCTTACACTACCTGGACCTGCGGAGATaGTGCCTAGCTGCAGCGCGAACCCTGCATACACAA +
Preference number: 6 (lower is better)
Translates to: GGEGLHYLDLRR*CLAAARTLHTQ
Trigger: TTGTGTATGCAGGGTTCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAGGTAGTGTAAGCCCTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp AAGGTCCCTCCTGCCCACCTGCTCTGTCTACTAACCTaGTGTCCTTGTCAGGTCCCAGCCCTACCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: KVPPAHLLCLLT*CPCQVPALPVL
Trigger: CAGGACAGGTAGGGCTGGGACCTGACAAGGACAGCAGGTTAGTAGACAGAGCAGGTGGGCAGGAGGGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 72 bp TCATTAGAACTCCGTCGGTGCCCCACCGCGTCTCCATaGCAACTCCCTACAGGAAGGGGCCTCTGCTACTTC +
Preference number: 6 (lower is better)
Translates to: SLELRRCPTASP*QLPTGRGLCYF
Trigger: GAAGTAGCAGAGGCCCCTTCCTGTAGGGAGTTGCCATGGAGACGCGGTGGGGCACCGACGGAGTTCTAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS CAA 72 bp GGCTGGGTGAAGCAGAGTACCCTGGAAGGCCAGGGGTaGAGCTGCAGTGGGATGAGATGGGCTGAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: GWVKQSTLEGQG*SCSGMRWAEVC
Trigger: ACAAACCTCAGCCCATCTCATCCCACTGCAGCTCAACCCCTGGCCTTCCAGGGTACTCTGCTTCACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CAA 90 bp GGAAGGGGCCTCTGCTACTTCCTAGACCGCAAAATGGAGAAAGGCTaGGCCCGATGCTTTCCGGCAGATGTAGTCAGCAGGCCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: GRGLCYFLDRKMEKG*ARCFPADVVSRPFV
Trigger: CACGAAGGGCCTGCTGACTACATCTGCCGGAAAGCATCGGGCCAAGCCTTTCTCCATTTTGCGGTCTAGGAAGTAGCAGAGGCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS TCA 72 bp ATCTACAGAGGAGAGAAGTGGGTCCCAGCCACACTGTaGGCACTCCAGCGTCAGACGCTGGGTGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: IYRGEKWVPATL*ALQRQTLGEGG
Trigger: TCCTCCTTCACCCAGCGTCTGACGCTGGAGTGCTCACAGTGTGGCTGGGACCCACTTCTCTCCTCTGTAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp GACTCCTCTTTCACCTGCAGGCCCAGTGGTGATTCCTaGATAGTCCTAGGAGGTGTCTTGGGCCCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: DSSFTCRPSGDS*IVLGGVLGPGS
Trigger: AGAGCCTGGGCCCAAGACACCTCCTAGGACTATGCAGGAATCACCACTGGGCCTGCAGGTGAAAGAGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
ENST00000600048.1
CDS GCA 72 bp TCTCGGAGGCTGGAGGTGGAGCCAACAGAAAGAGGGTaGAGGCTCCTGGATAGTGGTCTGGGGTTTGGATGT +
Preference number: 6 (lower is better)
Translates to: SRRLEVEPTERG*RLLDSGLGFGC
Trigger: ACATCCAAACCCCAGACCACTATCCAGGAGCCTGCACCCTCTTTCTGTTGGCTCCACCTCCAGCCTCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp CAAGGGGACCATTCATTCATGACAGAATGCCCACCGTaGCGGGACCCACTTCATCCCTGGGGACACAGTGTG +
Preference number: 6 (lower is better)
Translates to: QGDHSFMTECPP*RDPLHPWGHSV
Trigger: CACACTGTGTCCCCAGGGATGAAGTGGGTCCCGGCACGGTGGGCATTCTGTCATGAATGAATGGTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp CTTACACTACCTGGACCTGCGGAGATGCTGCCTAGCTaGAGCGCGAACCCTGCATACACAAGGGGACCATTC +
Preference number: 6 (lower is better)
Translates to: LTLPGPAEMLPS*SANPAYTRGPF
Trigger: GAATGGTCCCCTTGTGTATGCAGGGTTCGCGCTGCAGCTAGGCAGCATCTCCGCAGGTCCAGGTAGTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp GCTGAGGTTTGTGCCCCTGTAGCCGTATGTGAACCATaGGGCAAGGTGGTCAGCGGGGGTCAGAGGTATTGT +
Preference number: 6 (lower is better)
Translates to: AEVCAPVAVCEP*GKVVSGGQRYC
Trigger: ACAATACCTCTGACCCCCGCTGACCACCTTGCCCCATGGTTCACATACGGCTACAGGGGCACAAACCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 72 bp CGCGAACCCTGCATACACAAGGGGACCATTCATTCATaGCAGAATGCCCACCGTGCCGGGACCCACTTCATC +
Preference number: 6 (lower is better)
Translates to: REPCIHKGTIHS*QNAHRAGTHFI
Trigger: GATGAAGTGGGTCCCGGCACGGTGGGCATTCTGTCATGAATGAATGGTCCCCTTGTGTATGCAGGGTTCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp GTGGCCTTCCAGTACCTTCCCCATATTCCCCTAGCCTaGAGCTCCTATGTCCACGTGACTGCAGGTGATGCA +
Preference number: 6 (lower is better)
Translates to: VAFQYLPHIPLA*SSYVHVTAGDA
Trigger: TGCATCACCTGCAGTCACGTGGACATAGGAGCTGCAGGCTAGGGGAATATGGGGAAGGTACTGGAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595245.1
ENST00000600048.1
CDS GCA 72 bp CTGCATACACAAGGGGACCATTCATTCATGACAGAATaGCCACCGTGCCGGGACCCACTTCATCCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: LHTQGDHSFMTE*PPCRDPLHPWG
Trigger: TCCCCAGGGATGAAGTGGGTCCCGGCACGGTGGGCATTCTGTCATGAATGAATGGTCCCCTTGTGTATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp TTGGGCAGGATCCCTATCCTGTGTCAAGGTCCCTCCTaGCCACCTGCTCTGTCTACTAACCTGCTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LGRIPILCQGPS*PPALSTNLLSL
Trigger: CAAGGACAGCAGGTTAGTAGACAGAGCAGGTGGGCAGGAGGGACCTTGACACAGGATAGGGATCCTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 72 bp TGGGGAAACGTGAGCAAGGGCTCTAGGGCATACACATaGCACACAGAACCCGGGCCTGCAAGTGATCAACAC +
Preference number: 6 (lower is better)
Translates to: WGNVSKGSRAYT*HTEPGPASDQH
Trigger: GTGTTGATCACTTGCAGGCCCGGGTTCTGTGTGCCATGTGTATGCCCTAGAGCCCTTGCTCACGTTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp TGGAGGTGGAGCCAACAGAAAGAGGGTGCAGGCTCCTaGATAGTGGTCTGGGGTTTGGATGTGCCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: WRWSQQKEGAGS*IVVWGLDVPCL
Trigger: CAAGCAAGGCACATCCAAACCCCAGACCACTATCCAGGAGCCTGCACCCTCTTTCTGTTGGCTCCACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp GGAGGCCATCCAGGATACCAGGACTGGGAGAGAATGTaGGTACGGGGAATACTCGCCCTGCTTGCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: GGHPGYQDWERM*VRGILALLAKG
Trigger: ACCTTTTGCAAGCAGGGCGAGTATTCCCCGTACCCACATTCTCTCCCAGTCCTGGTATCCTGGATGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CAA 72 bp CCCAGTGGTGATTCCTGCATAGTCCTAGGAGGTGTCTaGGGCCCAGGCTCTGGAGTTGGAGGCTCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: PSGDSCIVLGGV*GPGSGVGGSVS
Trigger: TGAAACTGAGCCTCCAACTCCAGAGCCTGGGCCCAAGACACCTCCTAGGACTATGCAGGAATCACCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215057.7
ENST00000594108.1
ENST00000594234.5
ENST00000595245.1
ENST00000599369.5
ENST00000600048.1
CDS TCA 72 bp TCTGCAGCTGCGGCTTTAGGAAGGAATCTGCGTTTATaGAGGGGATGGCACCGCAGAATCATTCCCCCGTGG +
Preference number: 6 (lower is better)
Translates to: SAAAALGRNLRL*RGWHRRIIPPW
Trigger: CCACGGGGGAATGATTCTGCGGTGCCATCCCCTTCATAAACGCAGATTCCTTCCTAAAGCCGCAGCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594108.1
ENST00000596039.1
ENST00000600048.1
CDS TCA 72 bp GGCATACACATGGCACACAGAACCCGGGCCTGCAAGTaGTCAACACAGGGGTGGGTATCTACAGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: GIHMAHRTRACK*STQGWVSTEER
Trigger: TCTCTCCTCTGTAGATACCCACCCCTGTGTTGATCACTTGCAGGCCCGGGTTCTGTGTGCCATGTGTATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS GCA 72 bp TTCCTAGACCGCAAAATGGAGAAAGGCTTGGCCCGATaGTTTCCGGCAGATGTAGTCAGCAGGCCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: FLDRKMEKGLAR*FPADVVSRPFV
Trigger: CACGAAGGGCCTGCTGACTACATCTGCCGGAAAGCATCGGGCCAAGCCTTTCTCCATTTTGCGGTCTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS GCA 72 bp GCGTCTCCATGGCAACTCCCTACAGGAAGGGGCCTCTaGTACTTCCTAGACCGCAAAATGGAGAAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: ASPWQLPTGRGL*YFLDRKMEKGL
Trigger: CAAGCCTTTCTCCATTTTGCGGTCTAGGAAGTAGCAGAGGCCCCTTCCTGTAGGGAGTTGCCATGGAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS CCA 72 bp AACCTTATAGGGGATGATCTAGGGAATGGGGGAACTTaGGGATGCTGGAGTAAGAGGGCTGCCTGCGTAGGG +
Preference number: 6 (lower is better)
Translates to: NLIGDDLGNGGT*GCWSKRAACVG
Trigger: CCCTACGCAGGCAGCCCTCTTACTCCAGCATCCCCAAGTTCCCCCATTCCCTAGATCATCCCCTATAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 72 bp GGCCAAGCCTCCACTCTTCAAGGTGCCAAGTCAACCTaGAACCCTGGGAGAGACTTGGGTCATAGCCAAGAT +
Preference number: 6 (lower is better)
Translates to: GQASTLQGAKST*NPGRDLGHSQD
Trigger: ATCTTGGCTATGACCCAAGTCTCTCCCAGGGTTTCAGGTTGACTTGGCACCTTGAAGAGTGGAGGCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594108.1
CDS CCA 72 bp AAGGGCTGTAGGGCAAGCGTGGGGGCATTGTCTAGGTaGAAAATGATGGTCTCAGCAAATGCAGGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: KGCRASVGALSR*KMMVSANAGKW
Trigger: CCACTTCCCTGCATTTGCTGAGACCATCATTTTCCACCTAGACAATGCCCCCACGCTTGCCCTACAGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CAA 72 bp CTCTGCTACTTCCTAGACCGCAAAATGGAGAAAGGCTaGGCCCGATGCTTTCCGGCAGATGTAGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LCYFLDRKMEKG*ARCFPADVVSR
Trigger: CCTGCTGACTACATCTGCCGGAAAGCATCGGGCCAAGCCTTTCTCCATTTTGCGGTCTAGGAAGTAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599369.5
CDS GCA 72 bp GGTCCTCCCTCAGCAGCTCCTAATTATACCTCTGCCTaGTGTCTGTTCCCCAGTGACAAGCACATATTGCCT +
Preference number: 6 (lower is better)
Translates to: GPPSAAPNYTSA*CLFPSDKHILP
Trigger: AGGCAATATGTGCTTGTCACTGGGGAACAGACAGCAGGCAGAGGTATAATTAGGAGCTGCTGAGGGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CAA 72 bp TCTGCCTGCTGTCTGTTCCCCAGTGACAAGCACATATaGCCTAACGCATCTCCTTGGGGACTGAACACCACA +
Preference number: 6 (lower is better)
Translates to: SACCLFPSDKHI*PNASPWGLNTT
Trigger: TGTGGTGTTCAGTCCCCAAGGAGATGCGTTAGGCAATATGTGCTTGTCACTGGGGAACAGACAGCAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 72 bp AATCTAGAGAGGAAAACTGGTATCAGGCAGCCTGAGTaGGTTTCCACCCCACTGCCCTTCTTAGTGGTGTGC +
Preference number: 6 (lower is better)
Translates to: NLERKTGIRQPE*VSTPLPFLVVC
Trigger: GCACACCACTAAGAAGGGCAGTGGGGTGGAAACTCACTCAGGCTGCCTGATACCAGTTTTCCTCTCTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS GCA 72 bp CTGAAACTGACCAAAGAGGCAGACGGAGGCGACAAATaGAGGGGTAGGGATTCTATCTGTACAGACTTCCCT +
Preference number: 6 (lower is better)
Translates to: LKLTKEADGGDK*RGRDSICTDFP
Trigger: AGGGAAGTCTGTACAGATAGAATCCCTACCCCTGCATTTGTCGCCTCCGTCTGCCTCTTTGGTCAGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp GAGGGGAGACCTGACTGGGTAGAATGTGGGGGCTGCTaGCAGATGGAAACCATTCCATTTATAACAAACCTG +
Preference number: 6 (lower is better)
Translates to: EGRPDWVECGGC*QMETIPFITNL
Trigger: CAGGTTTGTTATAAATGGAATGGTTTCCATCTGCCAGCAGCCCCCACATTCTACCCAGTCAGGTCTCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CCA 72 bp CCCAGTGACAAGCACATATTGCCTAACGCATCTCCTTaGGGACTGAACACCACATGCCATCTGTACTGGGAA +
Preference number: 6 (lower is better)
Translates to: PSDKHILPNASP*GLNTTCHLYWE
Trigger: TTCCCAGTACAGATGGCATGTGGTGTTCAGTCCCCAAGGAGATGCGTTAGGCAATATGTGCTTGTCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS CAA 90 bp AATTATACCTCTGCCTGCTGTCTGTTCCCCAGTGACAAGCACATATaGCCTAACGCATCTCCTTGGGGACTGAACACCACATGCCATCTG +
Preference number: 6 (lower is better)
Translates to: NYTSACCLFPSDKHI*PNASPWGLNTTCHL
Trigger: CAGATGGCATGTGGTGTTCAGTCCCCAAGGAGATGCGTTAGGCAATATGTGCTTGTCACTGGGGAACAGACAGCAGGCAGAGGTATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 72 bp ACAAGCACATATTGCCTAACGCATCTCCTTGGGGACTaGACACCACATGCCATCTGTACTGGGAAACCCCAA +
Preference number: 6 (lower is better)
Translates to: TSTYCLTHLLGD*TPHAICTGKPQ
Trigger: TTGGGGTTTCCCAGTACAGATGGCATGTGGTGTTCAGTCCCCAAGGAGATGCGTTAGGCAATATGTGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS TCA 72 bp CCAGAACACCCACAAAGCTCCACCAAAACAAAGGTGTaGACTAAGAAAGAGGAGACCCTGGGTCTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: PEHPQSSTKTKV*TKKEETLGLRN
Trigger: GTTCCTGAGACCCAGGGTCTCCTCTTTCTTAGTTCACACCTTTGTTTTGGTGGAGCTTTGTGGGTGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1
CDS GCA 72 bp CTAGTAAGAAAAATGCACCTTAGGGCTGAACTCATCTaGCATTTCCACACCCTGACTGCAGGGACCCAAGTG +
Preference number: 6 (lower is better)
Translates to: LVRKMHLRAELI*HFHTLTAGTQV
Trigger: CACTTGGGTCCCTGCAGTCAGGGTGTGGAAATGGCAGATGAGTTCAGCCCTAAGGTGCATTTTTCTTACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600004.1
CDS CCA 72 bp CCAAAACAAAGGTGTGAACTAAGAAAGAGGAGACCCTaGGTCTCAGGAACAGGAAGGAACATAACAGAAGAT +
Preference number: 6 (lower is better)
Translates to: PKQRCELRKRRP*VSGTGRNITED
Trigger: ATCTTCTGTTATGTTCCTTCCTGTTCCTGAGACCCAGGGTCTCCTCTTTCTTAGTTCACACCTTTGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595245.1