RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYZAP (Homo sapiens)

Ensembl gene IDs: ENSG00000263155

Ensembl transcript IDs: ENST00000267853.10, ENST00000380565.8, ENST00000461709.1, ENST00000569089.1

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTGTCTGGCCCACACAAGTCTCTCAGTGTGGCTCCCACGACCCTaGACAGATGCTTGGGACCAAGAGGAAAGAGCACCTGCAGGCCGG +
Preference number: 1 (lower is better)
Translates to: ACLAHTSLSVWLPRP*TDAWDQEERAPAGR
Trigger: CCGGCCTGCAGGTGCTCTTTCCTCTTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCACACTGAGAGACTTGTGTGGGCCAGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 90 bp CACACAAGTCTCTCAGTGTGGCTCCCACGACCCTGCACAGATGCTTaGGACCAAGAGGAAAGAGCACCTGCAGGCCGGGAACCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: HTSLSVWLPRPCTDA*DQEERAPAGREPSL
Trigger: AAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTCCTCTTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCACACTGAGAGACTTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR GCA 90 bp GGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATaGTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: GREPSLPGSSLAGCP*FLWTGLSVSEKRCL
Trigger: GAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR GCA 90 bp CCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTaGCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGC +
Preference number: 1 (lower is better)
Translates to: PAGREPSLPGSSLAG*PCFLWTGLSVSEKR
Trigger: GCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 90 bp AGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTaGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAA +
Preference number: 1 (lower is better)
Translates to: STCRPGTLPSRFKFG*VPMLLVDRPLCIRE
Trigger: TTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 90 bp AAAGAGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTaGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAG +
Preference number: 1 (lower is better)
Translates to: KEHLQAGNPPFQVQV*LGAHASCGQASLYQ
Trigger: CTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 90 bp GCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCAGTGTaGCTCCCACGACCCTGCACAGATGCTTGGGACCAAGAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: AHQNEACLAHTSLSV*LPRPCTDAWDQEER
Trigger: TCTTTCCTCTTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCACACTGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR TCA 90 bp GAAAGCATAAGGCACAAATTAAACCAAGGGACTAGCGCATCAGAATaGAGCTTGTCTGGCCCACACAAGTCTCTCAGTGTGGCTCCCACG +
Preference number: 1 (lower is better)
Translates to: ESIRHKLNQGTSASE*SLSGPHKSLSVAPT
Trigger: CGTGGGAGCCACACTGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGTTTAATTTGTGCCTTATGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR TCA 90 bp AAACAAATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTaGAATGTGACCTTGTATATCCCTCTCTTACCTGCTCACTCTGCC +
Preference number: 1 (lower is better)
Translates to: KQMMMQYGRVCRVGV*NVTLYIPLLPAHSA
Trigger: GGCAGAGTGAGCAGGTAAGAGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
3UTR GCA 90 bp TGTCTGAAATGTGACCTTGTATATCCCTCTCTTACCTGCTCACTCTaGCTTCACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAG +
Preference number: 1 (lower is better)
Translates to: CLKCDLVYPSLTCSL*LHFPSCLRSGSEPQ
Trigger: CTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTGAAGGCAGAGTGAGCAGGTAAGAGAGGGATATACAAGGTCACATTTCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
3UTR CAA 90 bp CCACACAAGTCTCTCAGTGTGGCTCCCACGACCCTGCACAGATGCTaGGGACCAAGAGGAAAGAGCACCTGCAGGCCGGGAACCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PHKSLSVAPTTLHRC*GPRGKSTCRPGTLP
Trigger: AGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTCCTCTTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCACACTGAGAGACTTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CAA 90 bp GAAAGAGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTaGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCA +
Preference number: 2 (lower is better)
Translates to: ERAPAGREPSLPGSS*AGCPCFLWTGLSVS
Trigger: TGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR-3UTR GCA 90 bp GCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCCTTACCTGCTCACTCTaGCTTCACTTTCCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: AGREPSLPGSSLAGCPCFLTCSL*LHFPSC
Trigger: ACAGGAAGGAAAGTGAAGGCAGAGTGAGCAGGTAAG...GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR-3UTR GCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCAAGAGGAAAGAGCACCTaGAGGCCGGGAACCCTCCCT +
Preference number: 2 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSRGKST*RPGTLP
Trigger: AGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTCCTCT...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR-3UTR TCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTTGGGTGTCTGAAATGTaGCCTTGTATATCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLWVSEM*PCISLS
Trigger: AGAGAGGGATATACAAGGTCACATTTCAGACACCCA...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR-3UTR CCA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCAGGACTCTTGTGTATaGGGTGTAGTTCCTAGAAGG +
Preference number: 2 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRQDSCV*GVVPRR
Trigger: CCTTCTAGGAACTACACCCCATACACAAGAGTCCTG...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461709.1
3UTR-3UTR TCA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATTGGGTGTCTGAAATGTaGCCTTGTATATCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYWVSEM*PCISLS
Trigger: AGAGAGGGATATACAAGGTCACATTTCAGACACCCA...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
3UTR-3UTR GCA 90 bp ACAAAGAAAACAAATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGCTTACCTGCTCACTCTaGCTTCACTTTCCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: TKKTNDDAVRQGMPSGCLLTCSL*LHFPSC
Trigger: ACAGGAAGGAAAGTGAAGGCAGAGTGAGCAGGTAAG...CAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATTTGTTTTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
3UTR-3UTR GCA 90 bp CTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGTATCCCTCTCTTACCTaGTCACTCTGCCTTCACTTT +
Preference number: 2 (lower is better)
Translates to: LVDRPLCIRETLPLILLWYPSLT*SLCLHF
Trigger: AAAGTGAAGGCAGAGTGAGCAGGTAAGAGAGGGATA...CCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR-3UTR CCA 90 bp TTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTATCAGAGTTTTCTTCATaGTTAACTCCAGGACTCTTG +
Preference number: 2 (lower is better)
Translates to: FLPVLEVDQSLSDSHSGLSEFSS*LTPGLL
Trigger: CAAGAGTCCTGGAGTTAACCATGAAGAAAACTCTGA...TAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461709.1
3UTR CCA 72 bp CTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTaGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: LQAGNPPFQVQV*LGAHASCGQAS
Trigger: AGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 72 bp AGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTaGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: RPGTLPSRFKFG*VPMLLVDRPLC
Trigger: ACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR GCA 72 bp CGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTaGCCATGCTTCTTGTGGACAGGCCTCTCTGTATCA +
Preference number: 3 (lower is better)
Translates to: REPSLPGSSLAG*PCFLWTGLSVS
Trigger: TGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 72 bp CCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCTTGTaGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: PGSSLAGCPCFL*TGLSVSEKRCL
Trigger: GAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CCA 72 bp AATGAAGCTTGTCTGGCCCACACAAGTCTCTCAGTGTaGCTCCCACGACCCTGCACAGATGCTTGGGACCAA +
Preference number: 3 (lower is better)
Translates to: NEACLAHTSLSV*LPRPCTDAWDQ
Trigger: TTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCACACTGAGAGACTTGTGTGGGCCAGACAAGCTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR GCA 72 bp CCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATaGTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: PSLPGSSLAGCP*FLWTGLSVSEK
Trigger: TTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR TCA 72 bp AGGCACAAATTAAACCAAGGGACTAGCGCATCAGAATaGAGCTTGTCTGGCCCACACAAGTCTCTCAGTGTG +
Preference number: 3 (lower is better)
Translates to: RHKLNQGTSASE*SLSGPHKSLSV
Trigger: CACACTGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGTTTAATTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR GCA 72 bp TGTGACCTTGTATATCCCTCTCTTACCTGCTCACTCTaGCTTCACTTTCCTTCCTGTCTTAGAAGTGGATCA +
Preference number: 3 (lower is better)
Translates to: CDLVYPSLTCSL*LHFPSCLRSGS
Trigger: TGATCCACTTCTAAGACAGGAAGGAAAGTGAAGGCAGAGTGAGCAGGTAAGAGAGGGATATACAAGGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp GCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCAGAGGAAAGAGCACCTaGAGGCCGGGAACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AGREPSLPGSSLAGCPCFRGKST*RPGTLP
Trigger: AGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTCCTCT...GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp CCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCGGTCGGTAGCGGGCTaGACGCCGGCGTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQRFPFRLTLCVGETTVTRSVAG*TPAFLP
Trigger: CGGGAGGAACGCCGGCGTCCAGCCCGCTACCGACCG...GGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267853.10
CDS-3UTR TCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCACGCCCGAGAGCAGGGTaGCCGTGGACGTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSRPRAG*PWTWSA
Trigger: TGCGCTCCACGTCCACGGTCACCCTGCTCTCGGGCG...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp AGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCCCTTCCCAAAGGATTTaGAGCCACAGGGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: STCRPGTLPSRFKFGWVPPSQRI*SHRVPE
Trigger: CTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGG...GGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCACATTTGCCCTCCTGCTaGGCGCCCCGGGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSHLPSC*APRASW
Trigger: CCAGGACGCCCGGGGCGCCCAGCAGGAGGGCAAATG...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTACGCCCGAGAGCAGGGTaGCCGTGGACGTGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVRPRAG*PWTWSA
Trigger: TGCGCTCCACGTCCACGGTCACCCTGCTCTCGGGCG...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp AGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCCCTCGACCATCTGCTTaGCTTTCTTCTGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: STCRPGTLPSRFKFGWVPPRPSA*LSSAGN
Trigger: ATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGG...GGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTTGCGCTACCTCCAACTaGCTCTGCTTTTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLCATSN*LCFSLS
Trigger: GCTGAGGGAAAAGCAGAGGCAGTTGGAGGTAGCGCA...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATACGACCCTGCACAGATaGTTGGGACCAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HLQAGNPPFQVQVWLGAHTTLHR*LGPRGK
Trigger: CTTTCCTCTTGGTCCCAAGCATCTGTGCAGGGTCGT...ATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp AATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTCATTTGCCCTCCTGCTaGGCGCCCCGGGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NDDAVRQGMPSGCLKCDLHLPSC*APRASW
Trigger: CCAGGACGCCCGGGGCGCCCAGCAGGAGGGCAAATG...AAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp AGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCCCCTCAGCTTGTCCATaGATGCTTCATACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: STCRPGTLPSRFKFGWVPPSACP*MLHTSA
Trigger: AGCAGACGTATGAAGCATCCATGGACAAGCTGAGGG...GGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTACTAGCGCATCAGAATaGAGCTTGTCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLTSASE*SLSGPH
Trigger: GTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGT...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCTTTCAGCTGACTaGTGGACCACCCATACACCA +
Preference number: 4 (lower is better)
Translates to: TCRPGTLPSRFKFGWVPMLLSAD*WTTHTP
Trigger: TGGTGTATGGGTGGTCCACCAGTCAGCTGAAAGAAG...CATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCCCCTCAGCTTGTCCATaGATGCTTCATACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGREPSLPGSSLAGCPCFPSACP*MLHTSA
Trigger: AGCAGACGTATGAAGCATCCATGGACAAGCTGAGGG...GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GAAAGAGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGACATTGCTCAGGAACTaGACTCTCAGGAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: ERAPAGREPSLPGSSLAGTLLRN*TLRRYG
Trigger: ACCGTACCTCCTGAGAGTCCAGTTCCTGAGCAATGT...CCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GAAAGAGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGAGGTTCAAGTTTGGCTaGGTGCCCATGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ERAPAGREPSLPGSSLAGRFKFG*VPMLLV
Trigger: CACAAGAAGCATGGGCACCCAGCCAAACTTGAACCT...CCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTTCCAGATACTCCTGCTaGGCATGGGAAACTGATAGT +
Preference number: 4 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLSRYSC*AWETDS
Trigger: ACTATCAGTTTCCCATGCTCAGCAGGAGTATCTGGA...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTATGTCATCTAGGTGTCTaGTCCGCTCACGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLCHLGV*SAHGGW
Trigger: CCAGCCTCCGTGAGCGGATCAGACACCTAGATGACA...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp GAAAGAGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCGAGTGGGTGTCTaGAATGTGACCTTGTATATC +
Preference number: 4 (lower is better)
Translates to: ERAPAGREPSLPGSSLAGCRVGV*NVTLYI
Trigger: GATATACAAGGTCACATTTCAGACACCCACTCGGCA...CCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTAAACATTTGCCCTCCTaGTGGGCGCCCCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFKHLPS*WAPRAS
Trigger: GGACGCCCGGGGCGCCCAGCAGGAGGGCAAATGTTT...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp ATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGAGGAAAGAGCACCTaGAGGCCGGGAACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IRASAIPIPAYTVCRGNNRGKST*RPGTLP
Trigger: AGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTCCTCT...GTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCTGGCTCCCACGACCCTaGACAGATGCTTGGGACCAA +
Preference number: 4 (lower is better)
Translates to: PQRFPFRLTLCVGETTVTWLPRP*TDAWDQ
Trigger: TTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCA...GGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGTCAGCATTGGCTTCTTaGGACGATTCCACCTTCATT +
Preference number: 4 (lower is better)
Translates to: TCRPGTLPSRFKFGWVPMSALAS*DDSTFI
Trigger: AATGAAGGTGGAATCGTCCCAAGAAGCCAATGCTGA...CATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGACAAGTCTCTCAGTGTaGCTCCCACGACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: FQVQVWLGAHASCGQASLTSLSV*LPRPCT
Trigger: TGTGCAGGGTCGTGGGAGCCACACTGAGAGACTTGT...CAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTATGCGCTACCTCCAACTaGCTCTGCTTTTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLCATSN*LCFSLS
Trigger: GCTGAGGGAAAAGCAGAGGCAGTTGGAGGTAGCGCA...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGTGTATGCCTCTGAGTaGCTAAGTCAGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HLQAGNPPFQVQVWLGAHVYASE*LSQSFL
Trigger: AAGAAAACTCTGACTTAGGCACTCAGAGGCATACAC...ATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp CCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCAGCTCCCCGATCCTCTaGTCTTTCTCCTCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PQRFPFRLTLCVGETTVTSSPIL*SFSSRL
Trigger: CAGCCTAGAGGAGAAAGACCAGAGGATCGGGGAGCT...GGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp ACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGTTGACTTTCTTCTGCTaGCAATGCACCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: TCRPGTLPSRFKFGWVPMLTFFC*QCTMSS
Trigger: AGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAA...CATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
3UTR CAA 72 bp CTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCTaGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGSSLAGCPCF*WTGLSVSEKRC
Trigger: GCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp ACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGTGGCTCTCACATCTTTaGTGTAGTTCATCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TCRPGTLPSRFKFGWVPMWLSHL*CSSSLL
Trigger: AAGAAGAGATGAACTACATCAAAGATGTGAGAGCCA...CATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp AATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTTGTCATCTAGGTGTCTaGTCCGCTCACGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NDDAVRQGMPSGCLKCDLCHLGV*SAHGGW
Trigger: CCAGCCTCCGTGAGCGGATCAGACACCTAGATGACA...AAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTACCTTCCCAAAGGATTTaGAGCCACAGGGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLPSQRI*SHRVPE
Trigger: CTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGG...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACCGGTCAGCCGTAGTCTaGAAACATTTGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPVLEVDQSLSDSHSGLHRSAVV*KHLPSC
Trigger: GCAGGAGGGCAAATGTTTGCAGACTACGGCTGACCG...GTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp ACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGATCTTCTTTTCACATTaGTCAGGAACTGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: TCRPGTLPSRFKFGWVPMIFFSH*SGTGLS
Trigger: TGAGAGTCCAGTTCCTGAGCAATGTGAAAAGAAGAT...CATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCAAGCTCCCCGATCCTCTaGTCTTTCTCCTCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSSSPIL*SFSSRL
Trigger: CAGCCTAGAGGAGAAAGACCAGAGGATCGGGGAGCT...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTAGCTCCCCGATCCTCTaGTCTTTCTCCTCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPSSPIL*SFSSRL
Trigger: CAGCCTAGAGGAGAAAGACCAGAGGATCGGGGAGCT...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp CCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTTTCTCCTCTAGGCTaGTCTCTGCTGCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: PQRFPFRLTLCVGETTVTLSPLG*SLLLAS
Trigger: AGATGCAAGCAGCAGAGATCAGCCTAGAGGAGAAAG...GGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGGCCTCCTCCAACTGCTaGTACCTTTCCTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSEASSNC*YLSLSE
Trigger: TTCTGACAAGGAAAGGTATCAGCAGTTGGAGGAGGC...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp AGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAACCTCGACCATCTGCTTaGCTTTCTTCTGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SGSEPQRFPFRLTLCVGEPRPSA*LSSAGN
Trigger: ATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGG...TTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp GCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCAAAGTAGAGCATGCATaGACAGATGATTCATTCGTT +
Preference number: 4 (lower is better)
Translates to: AGREPSLPGSSLAGCPCFKVEHA*TDDSFV
Trigger: AACGAATGAATCATCTGTTCATGCATGCTCTACTTT...GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGACCTCCAACTGCCTCTaGTTTTCCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRTSNCL*FSLSLS
Trigger: GGACAAGCTGAGGGAAAAGCAGAGGCAGTTGGAGGT...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTAAGCTGGTTTTCAACTTaGGCTACCTCCAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLSWFST*ATSNCL
Trigger: GAGGCAGTTGGAGGTAGCGCAAGTTGAAAACCAGCT...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTTGGCTGGGTGCCCATaGTTCTTGTGGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFLAGCP*FLWTGL
Trigger: GAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAA...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp AGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAATCAAGTTTGGCTGGGTaGCCATGCTTCTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SGSEPQRFPFRLTLCVGESSLAG*PCFLWT
Trigger: TGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA...TTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGACATTGCTCAGGAACTaGACTCTCAGGAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSETLLRN*TLRRYG
Trigger: ACCGTACCTCCTGAGAGTCCAGTTCCTGAGCAATGT...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTCTTTCAGCTGACTGGTaGACCACCCATACACCACCA +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPLSADW*TTHTPP
Trigger: TGGTGGTGTATGGGTGGTCCACCAGTCAGCTGAAAG...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTCTTTCAGCTGACTGGTaGACCACCCATACACCACCA +
Preference number: 4 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSLSADW*TTHTPP
Trigger: TGGTGGTGTATGGGTGGTCCACCAGTCAGCTGAAAG...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTTTTCTGCAGGCCAATaGAATCTGATGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQVQVWLGAHASCGQASLFSAGQ*NLMPRL
Trigger: CAGCCTTGGCATCAGATTCCATTGGCCTGCAGAAAA...CAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTTTCATTTTTAGCAGCTaGTTTTCAACTTGCGCTACC +
Preference number: 4 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLFIFSS*FSTCAT
Trigger: GGTAGCGCAAGTTGAAAACCAGCTGCTAAAAATGAA...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTCCTGCCTGTTTGGCTaGGTAGAAGATCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLEVDQSLSDSHSGLHCVSCLFG*VEDHSP
Trigger: TGGGCTGTGATCTTCTACCCAGCCAAACAGGCAGGA...CACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTTACAGTGATTTCAGCTaGTCCAATGAAAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLYSDFS*SNESIR
Trigger: CCTTATGCTTTCATTGGACCAGCTGAAATCACTGTA...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp ACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCATCTCTTCTTTCAGCTaGCTGGTGGACCACCCATAC +
Preference number: 4 (lower is better)
Translates to: TFLPVLEVDQSLSDSHSGISSFS*LVDHPY
Trigger: GTATGGGTGGTCCACCAGTCAGCTGAAAGAAGAGAT...GCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTCTGATAGTTCCTGGGTaGGCTGTCGAATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSLIVPG*AVESSV
Trigger: GACAGAAGATTCGACAGCTCACCCAGGAACTATCAG...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp ATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACGACTGGGTTTGGATGTaGTTCTCCAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: IRASAIPIPAYTVCRGNNDWVWM*FSRYSC
Trigger: GCAGGAGTATCTGGAGAATCACATCCAAACCCAGTC...GTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCACTTTCTCCTCTAGGCTaGTCTCTGCTGCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSLSPLG*SLLLAS
Trigger: AGATGCAAGCAGCAGAGATCAGCCTAGAGGAGAAAG...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp ACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCGCCTCCTCCAACTGCTaGTACCTTTCCTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: TFLPVLEVDQSLSDSHSGASSNC*YLSLSE
Trigger: TTCTGACAAGGAAAGGTATCAGCAGTTGGAGGAGGC...GCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp CTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACCCTCGACCATCTGCTTaGCTTTCTTCTGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LPVLEVDQSLSDSHSGLHPRPSA*LSSAGN
Trigger: ATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGG...GTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTACCTTCCCAAAGGATTTaGAGCCACAGGGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVPSQRI*SHRVPE
Trigger: CTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGG...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATACTAGCGCATCAGAATaGAGCTTGTCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYTSASE*SLSGPH
Trigger: GTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGT...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTAAAGTAGAGCATGCATaGACAGATGATTCATTCGTT +
Preference number: 4 (lower is better)
Translates to: CRPGTLPSRFKFGWVPMLKVEHA*TDDSFV
Trigger: AACGAATGAATCATCTGTTCATGCATGCTCTACTTT...AAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACCAGCTTGTCCATGGATaGTTCATACGTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPVLEVDQSLSDSHSGLHQLVHG*FIRLLQ
Trigger: CTGCAGCAGACGTATGAAGCATCCATGGACAAGCTG...GTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTAGCTGGTTTTCAACTTaGGCTACCTCCAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSSWFST*ATSNCL
Trigger: GAGGCAGTTGGAGGTAGCGCAAGTTGAAAACCAGCT...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp ACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCGACGTTCCTTTTCCATaGGCTCAATCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TFLPVLEVDQSLSDSHSGDVPFP*AQSACP
Trigger: TGGACAGGCTGATTGAGCGCATGGAAAAGGAACGTC...GCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTTCAAGTTTGGCTGGGTaGCCATGCTTCTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPSSLAG*PCFLWT
Trigger: TGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCGCATCACCTCAGCATTaGCTTCTTGGGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: TFLPVLEVDQSLSDSHSGASPQH*LLGTIP
Trigger: TGGAATCGTCCCAAGAAGCCAATGCTGAGGTGATGC...GCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTGGCTGTACAGCTTCTTaGTCATCTCTCGCATCACCT +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPGCTAS*SSLASP
Trigger: AGGTGATGCGAGAGATGACCAAGAAGCTGTACAGCC...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTCCACTCCTATCTCTCTaGTTTCCACTTCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPPLLSL*FPLRSW
Trigger: CCAAGACCGAAGTGGAAACCAGAGAGATAGGAGTGG...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTATCCTGCCTGTTTGGCTaGGTAGAAGATCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVSCLFG*VEDHSP
Trigger: TGGGCTGTGATCTTCTACCCAGCCAAACAGGCAGGA...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGCAGGACTCTTGTGTATaGGGTGTAGTTCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSEQDSCV*GVVPRR
Trigger: CCTTCTAGGAACTACACCCCATACACAAGAGTCCTG...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCATTCCAGGTTCAAGTTTaGCTGGGTGCCCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSFQVQV*LGAHAS
Trigger: AGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAA...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGCTGCTGATTTTGATCTaGTCTTCGCACCACACCATA +
Preference number: 4 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSELLILI*SSHHTI
Trigger: TATGGTGTGGTGCGAAGATCAGATCAAAATCAGCAG...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCTGATAGTTCCTGGGTaGGCTGTCGAATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVLIVPG*AVESSV
Trigger: GACAGAAGATTCGACAGCTCACCCAGGAACTATCAG...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp GTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTGCCGAGTGGGTGTCTaGAATGTGACCTTGTATATC +
Preference number: 4 (lower is better)
Translates to: VLEVDQSLSDSHSGLHCVCRVGV*NVTLYI
Trigger: GATATACAAGGTCACATTTCAGACACCCACTCGGCA...CACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGTGCCGAGTGGGTGTCTaGAATGTGACCTTGTATATC +
Preference number: 4 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRCRVGV*NVTLYI
Trigger: GATATACAAGGTCACATTTCAGACACCCACTCGGCA...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp ACAAAGAAAACAAATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGACCTCCAACTGCCTCTaGTTTTCCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TKKTNDDAVRQGMPSGCLTSNCL*FSLSLS
Trigger: GGACAAGCTGAGGGAAAAGCAGAGGCAGTTGGAGGT...CAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATTTGTTTTCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACCTTACCTGCTCACTCTaGCTTCACTTTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LPVLEVDQSLSDSHSGLHLTCSL*LHFPSC
Trigger: ACAGGAAGGAAAGTGAAGGCAGAGTGAGCAGGTAAG...GTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTTTTTCTGCAGGCCAATaGAATCTGATGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPFSAGQ*NLMPRL
Trigger: CAGCCTTGGCATCAGATTCCATTGGCCTGCAGAAAA...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATGGCTGTACAGCTTCTTaGTCATCTCTCGCATCACCT +
Preference number: 4 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYGCTAS*SSLASP
Trigger: AGGTGATGCGAGAGATGACCAAGAAGCTGTACAGCC...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACCACTCCTATCTCTCTaGTTTCCACTTCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLPVLEVDQSLSDSHSGLPLLSL*FPLRSW
Trigger: CCAAGACCGAAGTGGAAACCAGAGAGATAGGAGTGG...TAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTAAGGTTCAAGTTTGGCTaGGTGCCCATGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: FLPVLEVDQSLSDSHSGLRFKFG*VPMLLV
Trigger: CACAAGAAGCATGGGCACCCAGCCAAACTTGAACCT...TAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCTTCCAGGTTCAAGTTTaGCTGGGTGCCCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVFQVQV*LGAHAS
Trigger: AGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAA...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTAGAATGAAGCTTGTCTaGCCCACACAAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSRMKLV*PTQVSQ
Trigger: CTGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCT...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTCTGCTGATTTTGATCTaGTCTTCGCACCACACCATA +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPLLILI*SSHHTI
Trigger: TATGGTGTGGTGCGAAGATCAGATCAAAATCAGCAG...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTATCCAGATACTCCTGCTaGGCATGGGAAACTGATAGT +
Preference number: 4 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVSRYSC*AWETDS
Trigger: ACTATCAGTTTCCCATGCTCAGCAGGAGTATCTGGA...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp AGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAACTCAGGTCAAGAAGCTaGTCTTTTCTCTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: SGSEPQRFPFRLTLCVGELRSRS*SFLSIF
Trigger: GAAGATTGAGAGAAAAGAGCAGCTTCTTGACCTGAG...TTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTGACGTTCCTTTTCCATaGGCTCAATCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFDVPFP*AQSACP
Trigger: TGGACAGGCTGATTGAGCGCATGGAAAAGGAACGTC...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp CTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTTCTTCTGCTGGCAATaGACCATGTCATCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPVLEVDQSLSDSHSGLHFFCWQ*TMSSRC
Trigger: ACACCTAGATGACATGGTGCATTGCCAGCAGAAGAA...GTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCAATTTCACGAGTCCTaGCTGTTTGGCTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYQFHES*LFGWVE
Trigger: TTCTACCCAGCCAAACAGGCAGGACTCGTGAAATTG...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCAATTTCACGAGTCCTaGCTGTTTGGCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYQFHES*LFGSPS
Trigger: AGAAGGAGAGCCAAACAGGCAGGACTCGTGAAATTG...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461709.1
CDS-3UTR CCA 90 bp AGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAATTGACTTTCTTCTGCTaGCAATGCACCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: SGSEPQRFPFRLTLCVGELTFFC*QCTMSS
Trigger: AGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAA...TTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCAGGACTCTTGTGTATaGGGTGTAGTTCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVQDSCV*GVVPRR
Trigger: CCTTCTAGGAACTACACCCCATACACAAGAGTCCTG...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp TTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTCAGAGTTTTCTTCATaGTTAACTCCAGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: FQVQVWLGAHASCGQASLSEFSS*LTPGLL
Trigger: CAAGAGTCCTGGAGTTAACCATGAAGAAAACTCTGA...CAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGAACCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp CTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGACTGGGTTTGGATGTaGTTCTCCAGATACTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVDRPLCIRETLPLILLWDWVWM*FSRYSC
Trigger: GCAGGAGTATCTGGAGAATCACATCCAAACCCAGTC...CCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTATGGGTGTCTGAAATGTaGCCTTGTATATCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FLPVLEVDQSLSDSHSGLWVSEM*PCISLS
Trigger: AGAGAGGGATATACAAGGTCACATTTCAGACACCCA...TAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR TCA 90 bp AATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTTGGGTGTCTGAAATGTaGCCTTGTATATCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NDDAVRQGMPSGCLKCDLWVSEM*PCISLS
Trigger: AGAGAGGGATATACAAGGTCACATTTCAGACACCCA...AAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp GCCTCTAATACTTTTATGGGTAAACAAAACCTTCATGCTCTATCAAACAATCCTAAACATTTGCCCTCCTaGTGGGCGCCCCGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ASNTFMGKQNLHALSNNPKHLPS*WAPRAS
Trigger: GGACGCCCGGGGCGCCCAGCAGGAGGGCAAATGTTT...AGGATTGTTTGATAGAGCATGAAGGTTTTGTTTACCCATAAAAGTATTAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTACTGATCTCTGCTGCTTaGATCTTTTTATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLLISAA*IFLLAS
Trigger: AGAAGCCAATAAAAAGATGCAAGCAGCAGAGATCAG...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGACGTTCCTTTTCCATaGGCTCAATCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVDRPLCIRETLPLILLWDVPFP*AQSACP
Trigger: TGGACAGGCTGATTGAGCGCATGGAAAAGGAACGTC...CCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp TTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTATTCTTCTGCTGGCAATaGACCATGTCATCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: FLPVLEVDQSLSDSHSGLFFCWQ*TMSSRC
Trigger: ACACCTAGATGACATGGTGCATTGCCAGCAGAAGAA...TAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp AATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTTTCTTCTGCTGGCAATaGACCATGTCATCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: NDDAVRQGMPSGCLKCDLFFCWQ*TMSSRC
Trigger: ACACCTAGATGACATGGTGCATTGCCAGCAGAAGAA...AAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTCAATTTCACGAGTCCTaGCTGTTTGGCTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFQFHES*LFGWVE
Trigger: TTCTACCCAGCCAAACAGGCAGGACTCGTGAAATTG...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTCTTACCTGCTCACTCTaGCTTCACTTTCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFLTCSL*LHFPSC
Trigger: ACAGGAAGGAAAGTGAAGGCAGAGTGAGCAGGTAAG...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCTATCCCTCTCTTACCTaGTCACTCTGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVYPSLT*SLCLHF
Trigger: AAAGTGAAGGCAGAGTGAGCAGGTAAGAGAGGGATA...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTATATCCCTCTCTTACCTaGTCACTCTGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVYPSLT*SLCLHF
Trigger: AAAGTGAAGGCAGAGTGAGCAGGTAAGAGAGGGATA...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp AAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCATCTGTAAAAAGTGTATGGCTCCCACGACCCTaGACAGATGCTTGGGACCAA +
Preference number: 4 (lower is better)
Translates to: KGFEATGFQSFCPSVKSVWLPRP*TDAWDQ
Trigger: TTGGTCCCAAGCATCTGTGCAGGGTCGTGGGAGCCA...TACACTTTTTACAGATGGACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTATCAGCATTGGCTTCTTaGGACGATTCCACCTTCATT +
Preference number: 4 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVSALAS*DDSTFI
Trigger: AATGAAGGTGGAATCGTCCCAAGAAGCCAATGCTGA...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTGACTTTCTTCTGCTaGCAATGCACCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: TFLPVLEVDQSLSDSHSGLTFFC*QCTMSS
Trigger: AGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAA...GCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp ACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTTCCACTTCGGTCTTaGCCTGGGTTTCTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: TFLPVLEVDQSLSDSHSGFPLRS*PGFLLN
Trigger: ATTTAACAGAAACCCAGGCCAAGACCGAAGTGGAAA...GCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTTGGCTCTCACATCTTTaGTGTAGTTCATCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPWLSHL*CSSSLL
Trigger: AAGAAGAGATGAACTACATCAAAGATGTGAGAGCCA...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCTCAGGTCAAGAAGCTaGTCTTTTCTCTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVLRSRS*SFLSIF
Trigger: GAAGATTGAGAGAAAAGAGCAGCTTCTTGACCTGAG...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp AATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTGTATGCCTCTGAGTaGCTAAGTCAGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NDDAVRQGMPSGCLKCDLVYASE*LSQSFL
Trigger: AAGAAAACTCTGACTTAGGCACTCAGAGGCATACAC...AAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGTTCATTTTTAGCAGCTaGTTTTCAACTTGCGCTACC +
Preference number: 4 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRFIFSS*FSTCAT
Trigger: GGTAGCGCAAGTTGAAAACCAGCTGCTAAAAATGAA...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCATCAGAGTTTTCTTCATaGTTAACTCCAGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSSEFSS*LTPGLL
Trigger: CAAGAGTCCTGGAGTTAACCATGAAGAAAACTCTGA...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTTCAGAGTTTTCTTCATaGTTAACTCCAGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSSEFSS*LTPGLL
Trigger: CAAGAGTCCTGGAGTTAACCATGAAGAAAACTCTGA...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CCA 90 bp CTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGAGAATGAAGCTTGTCTaGCCCACACAAGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LVDRPLCIRETLPLILLWRMKLV*PTQVSQ
Trigger: CTGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCT...CCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGTACAGTGATTTCAGCTaGTCCAATGAAAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRYSDFS*SNESIR
Trigger: CCTTATGCTTTCATTGGACCAGCTGAAATCACTGTA...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp TTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACTGATCTCTGCTGCTTaGATCTTTTTATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FLPVLEVDQSLSDSHSGLLISAA*IFLLAS
Trigger: AGAAGCCAATAAAAAGATGCAAGCAGCAGAGATCAG...TAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTGTGTATGCCTCTGAGTaGCTAAGTCAGAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFVYASE*LSQSFL
Trigger: AAGAAAACTCTGACTTAGGCACTCAGAGGCATACAC...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp CCTCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCACGACCCTGCACAGATaGTTGGGACCAAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PLCIRETLPLILLWVNKTTTLHR*LGPRGK
Trigger: CTTTCCTCTTGGTCCCAAGCATCTGTGCAGGGTCGT...GGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp TCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTTCGGTCAGCCGTAGTCTaGAAACATTTGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLYQRNAASNTFMGKQNLRSAVV*KHLPSC
Trigger: GCAGGAGGGCAAATGTTTGCAGACTACGGCTGACCG...AAGGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GCCTCTAATACTTTTATGGGTAAACAAAACCTTCATGCTCTATCAAACAATCCTTTGGCTGGGTGCCCATaGTTCTTGTGGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ASNTFMGKQNLHALSNNPLAGCP*FLWTGL
Trigger: GAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAA...AGGATTGTTTGATAGAGCATGAAGGTTTTGTTTACCCATAAAAGTATTAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp AAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCATCTGTAAAAAGTGTACAGGACTCTTGTGTATaGGGTGTAGTTCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGFEATGFQSFCPSVKSVQDSCV*GVVPRR
Trigger: CCTTCTAGGAACTACACCCCATACACAAGAGTCCTG...TACACTTTTTACAGATGGACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR GCA 90 bp CCTCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTATCCCTCTCTTACCTaGTCACTCTGCCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: PLCIRETLPLILLWVNKTYPSLT*SLCLHF
Trigger: AAAGTGAAGGCAGAGTGAGCAGGTAAGAGAGGGATA...GGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTTCTTCTTTCAGCTGACTaGTGGACCACCCATACACCA +
Preference number: 4 (lower is better)
Translates to: SLYQRNAASNTFMGKQNLLLSAD*WTTHTP
Trigger: TGGTGTATGGGTGGTCCACCAGTCAGCTGAAAGAAG...AAGGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp AACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTTCATGCTCTATCAAACGCATCACCTCAGCATTaGCTTCTTGGGACGATTCCA +
Preference number: 4 (lower is better)
Translates to: NAASNTFMGKQNLHALSNASPQH*LLGTIP
Trigger: TGGAATCGTCCCAAGAAGCCAATGCTGAGGTGATGC...GTTTGATAGAGCATGAAGGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR GCA 90 bp GCCTCTAATACTTTTATGGGTAAACAAAACCTTCATGCTCTATCAAACAATCCTCAGCTTGTCCATGGATaGTTCATACGTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASNTFMGKQNLHALSNNPQLVHG*FIRLLQ
Trigger: CTGCAGCAGACGTATGAAGCATCCATGGACAAGCTG...AGGATTGTTTGATAGAGCATGAAGGTTTTGTTTACCCATAAAAGTATTAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR TCA 90 bp GCCTCTAATACTTTTATGGGTAAACAAAACCTTCATGCTCTATCAAACAATCCTTGGGTGTCTGAAATGTaGCCTTGTATATCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ASNTFMGKQNLHALSNNPWVSEM*PCISLS
Trigger: AGAGAGGGATATACAAGGTCACATTTCAGACACCCA...AGGATTGTTTGATAGAGCATGAAGGTTTTGTTTACCCATAAAAGTATTAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CCA 90 bp TCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTTTTTCCACTTCGGTCTTaGCCTGGGTTTCTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: SLYQRNAASNTFMGKQNLFPLRS*PGFLLN
Trigger: ATTTAACAGAAACCCAGGCCAAGACCGAAGTGGAAA...AAGGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS GCA 90 bp ACGCCGGCGTTCCTCCCGGGCAGAATAAGCGTGCGGGGCCCGCCCTaGGCGGGGGCGACGCGGGACGGCGCCGGCTACTTGCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: TPAFLPGRISVRGPP*AGATRDGAGYLQPQ
Trigger: CTGAGGCTGCAAGTAGCCGGCGCCGTCCCGCGTCGCCCCCGCGCAGGGCGGGCCCCGCACGCTTATTCTGCCCGGGAGGAACGCCGGCGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267853.10
CDS CCA 90 bp GCTTGGCAGTGCCCTGAACACCACTGCTACCGAACCAGCTGTCCCTaGGGGCAAGGGTTCCTTCCAGGAGATCAAAGCAGGAAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AWQCPEHHCYRTSCP*GQGFLPGDQSRKLD
Trigger: GTCCAGCTTCCTGCTTTGATCTCCTGGAAGGAACCCTTGCCCCCAGGGACAGCTGGTTCGGTAGCAGTGGTGTTCAGGGCACTGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569089.1
CDS-3UTR CAA 90 bp AGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCTGGCTGTACAGCTTCTaGGTCATCTCTCGCATCACC +
Preference number: 5 (lower is better)
Translates to: STCRPGTLPSRFKFGWVPWLYSF*VISRIT
Trigger: GGTGATGCGAGAGATGACCAAGAAGCTGTACAGCCA...GGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GAAAGAGCACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGGGCAGACGACTGGGTTaGGATGTGATTCTCCAGATA +
Preference number: 5 (lower is better)
Translates to: ERAPAGREPSLPGSSLAGGRRLG*DVILQI
Trigger: TATCTGGAGAATCACATCCAAACCCAGTCGTCTGCC...CCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTGCTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CACCTGCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGTTTCCACTTCGGTCTaGGCCTGGGTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: HLQAGNPPFQVQVWLGAHVSTSV*AWVSVK
Trigger: TTTAACAGAAACCCAGGCCAAGACCGAAGTGGAAAC...ATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GCAGGCCGGGAACCCTCCCTTCCAGGTTCAAGTTTGGCTGGGTGCCCATGCTTCAATCTTCTTTTCACATaGCTCAGGAACTGGACTCTC +
Preference number: 5 (lower is better)
Translates to: AGREPSLPGSSLAGCPCFNLLFT*LRNWTL
Trigger: GAGAGTCCAGTTCCTGAGCAATGTGAAAAGAAGATT...GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAGGGAGGGTTCCCGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp ATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACGGGTGCCCATGCTTCTaGTGGACAGGCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: IRASAIPIPAYTVCRGNNGCPCF*WTGLSV
Trigger: TACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCC...GTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGTGGCTGTACAGCTTCTaGGTCATCTCTCGCATCACC +
Preference number: 5 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSEWLYSF*VISRIT
Trigger: GGTGATGCGAGAGATGACCAAGAAGCTGTACAGCCA...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGTGCCCATGCTTCTaGTGGACAGGCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: LRSGSEPQRFPFRLTLCVGCPCF*WTGLSV
Trigger: TACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCC...TACACACAGTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTCCAGGTTCAAGTTaGGCTGGGTGCCCATGCTTC +
Preference number: 5 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRLPGSS*AGCPCF
Trigger: GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAG...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS TCA 90 bp ACATTTGCCTCCGAGCATTTTACGAGGCTGATCTCCATGGTCTCCTaGAACTCGGATACACAATCTCCAGAGATGCCCCAGGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: TFASEHFTRLISMVS*NSDTQSPEMPQAWQ
Trigger: CTGCCAAGCCTGGGGCATCTCTGGAGATTGTGTATCCGAGTTTCAGGAGACCATGGAGATCAGCCTCGTAAAATGCTCGGAGGCAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569089.1
CDS GCA 90 bp GATTCAATCTCCTCGACCATCTGCTTGACTTTCTTCTGCTGGCAATaGACCATGTCATCTAGGTGTCTGATCCGCTCACGGAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: DSISSTICLTFFCWQ*TMSSRCLIRSRRLA
Trigger: AGCCAGCCTCCGTGAGCGGATCAGACACCTAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGGAGATTGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000461709.1
CDS-3UTR CAA 90 bp CACTTTCCTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTGGTAGGTTCTCCATaGCTCAGGTCAAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HFPSCLRSGSEPQRFPFRLVGSP*LRSRSC
Trigger: GCAGCTTCTTGACCTGAGCAATGGAGAACCTACCAG...CCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAGGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTCAGCTGGTTTTCAACTaGCGCTACCTCCAACTGCCT +
Preference number: 5 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSQLVFN*RYLQLP
Trigger: AGGCAGTTGGAGGTAGCGCAAGTTGAAAACCAGCTG...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CTTCCTGTCTTAGAAGTGGATCAGAGCCTCAGCGATTCCCATTCCGGCTTACACCAGCTGGTTTTCAACTaGCGCTACCTCCAACTGCCT +
Preference number: 5 (lower is better)
Translates to: LPVLEVDQSLSDSHSGLHQLVFN*RYLQLP
Trigger: AGGCAGTTGGAGGTAGCGCAAGTTGAAAACCAGCTG...GTGTAAGCCGGAATGGGAATCGCTGAGGCTCTGATCCACTTCTAAGACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCGCATCACCTCAGCATaGGCTTCTTGGGACGATTCC +
Preference number: 5 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVRITSA*ASWDDS
Trigger: GGAATCGTCCCAAGAAGCCAATGCTGAGGTGATGCG...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTATGCTTTTCCCTCAGCTaGTCCATGGATGCTTCATAC +
Preference number: 5 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLCFSLS*SMDASY
Trigger: GTATGAAGCATCCATGGACAAGCTGAGGGAAAAGCA...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTCGCATCACCTCAGCATaGGCTTCTTGGGACGATTCC +
Preference number: 5 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFRITSA*ASWDDS
Trigger: GGAATCGTCCCAAGAAGCCAATGCTGAGGTGATGCG...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGTTAACTCCAGGACTCTaGTGTATGGGGTGTAGTTCC +
Preference number: 5 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSELTPGL*CMGCSS
Trigger: GGAACTACACCCCATACACAAGAGTCCTGGAGTTAA...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CCTCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCTTAACTCCAGGACTCTaGTGTATGGGGTGTAGTTCC +
Preference number: 5 (lower is better)
Translates to: PQRFPFRLTLCVGETTVTLTPGL*CMGCSS
Trigger: GGAACTACACCCCATACACAAGAGTCCTGGAGTTAA...GGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CAA 90 bp GTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCCCTCTACGAGTCCTGCCTGTTaGGCTCTCCTTCTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: VRQGMPSGCLKCDLVYPSTSPAC*ALLLRK
Trigger: CTTTCTTAGAAGGAGAGCCAAACAGGCAGGACTCGT...AGAGGGATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461709.1
CDS-3UTR CAA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATCTCAGCATTGGCTTCTaGGGACGATTCCACCTTCAT +
Preference number: 5 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYLSIGF*GRFHLH
Trigger: ATGAAGGTGGAATCGTCCCAAGAAGCCAATGCTGAG...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp ACAAAGAAAACAAATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGCTCAGCATTGGCTTCTaGGGACGATTCCACCTTCAT +
Preference number: 5 (lower is better)
Translates to: TKKTNDDAVRQGMPSGCLLSIGF*GRFHLH
Trigger: ATGAAGGTGGAATCGTCCCAAGAAGCCAATGCTGAG...CAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATTTGTTTTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAGGGTTCCAGAGCTTTaGTCCATCTGTAAAAAGTGT +
Preference number: 5 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSERVPEL*SICKKC
Trigger: ACACTTTTTACAGATGGACAAAAGCTCTGGAACCCT...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS GCA 90 bp CTTTGTAGTTCATTATTCTCCTCGACCATCTGCTTGACTTTCTTCTaGTGGCAATGCACCATGTCATCTAGGTGTCTGATCCGCTCACGG +
Preference number: 5 (lower is better)
Translates to: LCSSLFSSTICLTFF*WQCTMSSRCLIRSR
Trigger: CCGTGAGCGGATCAGACACCTAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGGAGAATAATGAACTACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380565.8
CDS-3UTR CAA 90 bp TCAAGTTTGGCTGGGTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGGCTTTCAGAAAACTATaGGTTTCTTCCAAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSLAGCPCFLWTGLSVSEAFRKL*VSSKRA
Trigger: GGCTCTTTTGGAAGAAACCAATAGTTTTCTGAAAGC...CTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCACCCAGCCAAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GTGCCCATGCTTCTTGTGGACAGGCCTCTCTGTATCAGAGAAACGCTGCCTCTAGCTTTCAGAAAACTATaGGTTTCTTCCAAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: VPMLLVDRPLCIRETLPLAFRKL*VSSKRA
Trigger: GGCTCTTTTGGAAGAAACCAATAGTTTTCTGAAAGC...TAGAGGCAGCGTTTCTCTGATACAGAGAGGCCTGTCCACAAGAAGCATGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGAAATGTGACCTTGTATATGCTGATCTCTGCTGCTaGCATCTTTTTATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: DAVRQGMPSGCLKCDLVYADLCC*HLFIGF
Trigger: GAAGCCAATAAAAAGATGCAAGCAGCAGAGATCAGC...ATATACAAGGTCACATTTCAGACACCCACTCGGCATACCCTGCCGTACTGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp GAAACAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTGTTTCCACTTCGGTCTaGGCCTGGGTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: ETTVTLPKGFEATGFQSFVSTSV*AWVSVK
Trigger: TTTAACAGAAACCCAGGCCAAGACCGAAGTGGAAAC...AAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp ACAAAGAAAACAAATGATGATGCAGTACGGCAGGGTATGCCGAGTGGGTGTCTGTTAACTCCAGGACTCTaGTGTATGGGGTGTAGTTCC +
Preference number: 5 (lower is better)
Translates to: TKKTNDDAVRQGMPSGCLLTPGL*CMGCSS
Trigger: GGAACTACACCCCATACACAAGAGTCCTGGAGTTAA...CAGACACCCACTCGGCATACCCTGCCGTACTGCATCATCATTTGTTTTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS GCA 90 bp CGCTACCTCCAACTGCCTCTGCTTTTCCCTCAGCTTGTCCATGGATaGTTCATACGTCTGCTGCAGATTTCTGATTTGATCCTTAATGTT +
Preference number: 5 (lower is better)
Translates to: RYLQLPLLFPQLVHG*FIRLLQISDLILNV
Trigger: AACATTAAGGATCAAATCAGAAATCTGCAGCAGACGTATGAAGCATCCATGGACAAGCTGAGGGAAAAGCAGAGGCAGTTGGAGGTAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS GCA 90 bp TTCTTTAATGATTCAATCTCCTCGACCATCTGCTTGACTTTCTTCTaGTGGCAATGCACCATGTCATCTAGGTGTCTGATCCGCTCACGG +
Preference number: 5 (lower is better)
Translates to: FFNDSISSTICLTFF*WQCTMSSRCLIRSR
Trigger: CCGTGAGCGGATCAGACACCTAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGGAGATTGAATCATTAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000461709.1
CDS-3UTR CAA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCAATCTTCTTTTCACATaGCTCAGGAACTGGACTCTC +
Preference number: 5 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVNLLFT*LRNWTL
Trigger: GAGAGTCCAGTTCCTGAGCAATGTGAAAAGAAGATT...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp CAACAGTCACCCTTCCCAAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCAGGGTTCCAGAGCTTTaGTCCATCTGTAAAAAGTGT +
Preference number: 5 (lower is better)
Translates to: QQSPFPKDLKPQGSRAFVRVPEL*SICKKC
Trigger: ACACTTTTTACAGATGGACAAAAGCTCTGGAACCCT...GACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTTGGGAAGGGTGACTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS-3UTR CAA 90 bp AAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCATCTGTAAAAAGTGTACTTCCAGGTTCAAGTTaGGCTGGGTGCCCATGCTTC +
Preference number: 5 (lower is better)
Translates to: KGFEATGFQSFCPSVKSVLPGSS*AGCPCF
Trigger: GAAGCATGGGCACCCAGCCAAACTTGAACCTGGAAG...TACACTTTTTACAGATGGACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp AAAGGATTTGAAGCCACAGGGTTCCAGAGCTTTTGTCCATCTGTAAAAAGTGTACTGGTAGGTTCTCCATaGCTCAGGTCAAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KGFEATGFQSFCPSVKSVLVGSP*LRSRSC
Trigger: GCAGCTTCTTGACCTGAGCAATGGAGAACCTACCAG...TACACTTTTTACAGATGGACAAAAGCTCTGGAACCCTGTGGCTTCAAATCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp TCAGCGATTCCCATTCCGGCTTACACTGTGTGTAGGGGAAACAACAGTCACCCTCTGCAGATTTCTGATTaGATCCTTAATGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SAIPIPAYTVCRGNNSHPLQISD*ILNVAV
Trigger: AACAGCAACATTAAGGATCAAATCAGAAATCTGCAG...AGGGTGACTGTTGTTTCCCCTACACACAGTGTAAGCCGGAATGGGAATCGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp ACCAAGGGACTAGCGCATCAGAATGAAGCTTGTCTGGCCCACACAAGTCTCTCACTGCAGATTTCTGATTaGATCCTTAATGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: TKGLAHQNEACLAHTSLSLQISD*ILNVAV
Trigger: AACAGCAACATTAAGGATCAAATCAGAAATCTGCAG...TGAGAGACTTGTGTGGGCCAGACAAGCTTCATTCTGATGCGCTAGTCCCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp TCTCTGTATCAGAGAAACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTTTGCTTTTCCCTCAGCTaGTCCATGGATGCTTCATAC +
Preference number: 5 (lower is better)
Translates to: SLYQRNAASNTFMGKQNLCFSLS*SMDASY
Trigger: GTATGAAGCATCCATGGACAAGCTGAGGGAAAAGCA...AAGGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTTTCTCTGATACAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS-3UTR CAA 90 bp AACGCTGCCTCTAATACTTTTATGGGTAAACAAAACCTTCATGCTCTATCAAACAGGGTTCCAGAGCTTTaGTCCATCTGTAAAAAGTGT +
Preference number: 5 (lower is better)
Translates to: NAASNTFMGKQNLHALSNRVPEL*SICKKC
Trigger: ACACTTTTTACAGATGGACAAAAGCTCTGGAACCCT...GTTTGATAGAGCATGAAGGTTTTGTTTACCCATAAAAGTATTAGAGGCAGCGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS TCA 72 bp CCCCGGGCGTCCTGGCGGCGCCGCCCGAGAGCAGGGTaGCCGTGGACGTGGAGCGCAGCATCCCGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PRASWRRRPRAG*PWTWSAASRSG
Trigger: GCCGCTGCGGGATGCTGCGCTCCACGTCCACGGTCACCCTGCTCTCGGGCGGCGCCGCCAGGACGCCCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267853.10
CDS CCA 72 bp TGCCCTGAACACCACTGCTACCGAACCAGCTGTCCCTaGGGGCAAGGGTTCCTTCCAGGAGATCAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: CPEHHCYRTSCP*GQGFLPGDQSR
Trigger: CCTGCTTTGATCTCCTGGAAGGAACCCTTGCCCCCAGGGACAGCTGGTTCGGTAGCAGTGGTGTTCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569089.1
CDS GCA 72 bp TGGTCTCCTGAAACTCGGATACACAATCTCCAGAGATaGCCCAGGCTTGGCAGTGCCCTGAACACCACTGCT +
Preference number: 6 (lower is better)
Translates to: WSPETRIHNLQR*PRLGSALNTTA
Trigger: AGCAGTGGTGTTCAGGGCACTGCCAAGCCTGGGGCATCTCTGGAGATTGTGTATCCGAGTTTCAGGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569089.1
CDS GCA 72 bp TCCTCGACCATCTGCTTGACTTTCTTCTGCTGGCAATaGACCATGTCATCTAGGTGTCTGATCCGCTCACGG +
Preference number: 6 (lower is better)
Translates to: SSTICLTFFCWQ*TMSSRCLIRSR
Trigger: CCGTGAGCGGATCAGACACCTAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000461709.1
CDS TCA 72 bp TCCGAGCATTTTACGAGGCTGATCTCCATGGTCTCCTaGAACTCGGATACACAATCTCCAGAGATGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SEHFTRLISMVS*NSDTQSPEMPQ
Trigger: CTGGGGCATCTCTGGAGATTGTGTATCCGAGTTTCAGGAGACCATGGAGATCAGCCTCGTAAAATGCTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569089.1
CDS TCA 72 bp CCAGCTCCCCGATCCTCTGGTCTTTCTCCTCTAGGCTaGTCTCTGCTGCTTGCATCTTTTTATTGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: PAPRSSGLSPLG*SLLLASFYWLL
Trigger: AAGAAGCCAATAAAAAGATGCAAGCAGCAGAGATCAGCCTAGAGGAGAAAGACCAGAGGATCGGGGAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS GCA 72 bp TTTAGCAGCTGGTTTTCAACTTGCGCTACCTCCAACTaGCTCTGCTTTTCCCTCAGCTTGTCCATGGATGCT +
Preference number: 6 (lower is better)
Translates to: FSSWFSTCATSN*LCFSLSLSMDA
Trigger: AGCATCCATGGACAAGCTGAGGGAAAAGCAGAGGCAGTTGGAGGTAGCGCAAGTTGAAAACCAGCTGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS CAA 72 bp CATGGCATTAAAACGATCCAGGGCAGACGACTGGGTTaGGATGTGATTCTCCAGATACTCCTGCTGAGCATG +
Preference number: 6 (lower is better)
Translates to: HGIKTIQGRRLG*DVILQILLLSM
Trigger: CATGCTCAGCAGGAGTATCTGGAGAATCACATCCAAACCCAGTCGTCTGCCCTGGATCGTTTTAATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS TCA 72 bp ACTCCTGCTGAGCATGGGAAACTGATAGTTCCTGGGTaGGCTGTCGAATCTTCTGTCTCATCTCATCATAGT +
Preference number: 6 (lower is better)
Translates to: TPAEHGKLIVPG*AVESSVSSHHS
Trigger: ACTATGATGAGATGAGACAGAAGATTCGACAGCTCACCCAGGAACTATCAGTTTCCCATGCTCAGCAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000569089.1
CDS TCA 72 bp GTCTGCAAACATTTGCCTCCGAGCATTTTACGAGGCTaGTCTCCATGGTCTCCTGAAACTCGGATACACAAT +
Preference number: 6 (lower is better)
Translates to: VCKHLPPSILRG*SPWSPETRIHN
Trigger: ATTGTGTATCCGAGTTTCAGGAGACCATGGAGATCAGCCTCGTAAAATGCTCGGAGGCAAATGTTTGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569089.1
CDS CAA 72 bp TACAGCTTCTTGGTCATCTCTCGCATCACCTCAGCATaGGCTTCTTGGGACGATTCCACCTTCATTTTTAGC +
Preference number: 6 (lower is better)
Translates to: YSFLVISRITSA*ASWDDSTFIFS
Trigger: GCTAAAAATGAAGGTGGAATCGTCCCAAGAAGCCAATGCTGAGGTGATGCGAGAGATGACCAAGAAGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8
CDS TCA 72 bp CCCATACACCACCATTTCTTTCTGCTGATTTTGATCTaGTCTTCGCACCACACCATAAACAACACCCTGAGG +
Preference number: 6 (lower is better)
Translates to: PIHHHFFLLILI*SSHHTINNTLR
Trigger: CCTCAGGGTGTTGTTTATGGTGTGGTGCGAAGATCAGATCAAAATCAGCAGAAAGAAATGGTGGTGTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267853.10
ENST00000380565.8
ENST00000569089.1
CDS GCA 72 bp CGGTCTTGGCCTGGGTTTCTGTTAAATAGTCCAACCTaGTTTGTAGTTCATTATTCTCCTCGACCATCTGCT +
Preference number: 6 (lower is better)
Translates to: RSWPGFLLNSPT*FVVHYSPRPSA
Trigger: AGCAGATGGTCGAGGAGAATAATGAACTACAAAGCAGGTTGGACTATTTAACAGAAACCCAGGCCAAGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380565.8
CDS TCA 72 bp TGCTTTGTAGTTCATTATTCTCCTCGACCATCTGCTTaGCTTTCTTCTGCTGGCAATGCACCATGTCATCTA +
Preference number: 6 (lower is better)
Translates to: CFVVHYSPRPSA*LSSAGNAPCHL
Trigger: TAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGGAGAATAATGAACTACAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380565.8
CDS TCA 72 bp TTTTCTTTAATGATTCAATCTCCTCGACCATCTGCTTaGCTTTCTTCTGCTGGCAATGCACCATGTCATCTA +
Preference number: 6 (lower is better)
Translates to: FSLMIQSPRPSA*LSSAGNAPCHL
Trigger: TAGATGACATGGTGCATTGCCAGCAGAAGAAAGTCAAGCAGATGGTCGAGGAGATTGAATCATTAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000461709.1
CDS CAA 72 bp CATGGATGCTTCATACGTCTGCTGCAGATTTCTGATTaGATCCTTAATGTTGCTGTTTTCCAAAGTCACATC +
Preference number: 6 (lower is better)
Translates to: HGCFIRLLQISD*ILNVAVFQSHI
Trigger: GATGTGACTTTGGAAAACAGCAACATTAAGGATCAAATCAGAAATCTGCAGCAGACGTATGAAGCATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267853.10
ENST00000380565.8