RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYRIP (Homo sapiens)

Ensembl gene IDs: ENSG00000170011

Ensembl transcript IDs: ENST00000302541.11, ENST00000396217.7, ENST00000425621.5, ENST00000444716.5, ENST00000458292.5, ENST00000458441.5, ENST00000459828.5, ENST00000475082.5, ENST00000482033.5, ENST00000539167.2

Found 1132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTGGTCCCTTaGCTGCCTCGATGGAGCCTCCACTGGAGGGGTCTTCAGGGCTTC +
Preference number: 1 (lower is better)
Translates to: AGQSRLCSRVLALVP*LPRWSLHWRGLQGF
Trigger: GAAGCCCTGAAGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp CAACCAGGACAGTCTGGCCTGGTGCCCAACTTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTCAGAGCACATGGCCTCAGGGTTGGG +
Preference number: 1 (lower is better)
Translates to: QPGQSGLVPNFSGRA*GGGLRVRAHGLRVG
Trigger: CCCAACCCTGAGGCCATGTGCTCTGACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp CTCTTCCAGCTGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGATGGAGCCTCCACTGGAGGGGTCTTC +
Preference number: 1 (lower is better)
Translates to: LFQLGRADSALGCWP*SLGCLDGASTGGVF
Trigger: GAAGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp TCCACACTCTTCCAGCTGGGCAGAGCAGACTCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGCCTCGATGGAGCCTCCACTGGAGGG +
Preference number: 1 (lower is better)
Translates to: STLFQLGRADSALGC*PWSLGCLDGASTGG
Trigger: CCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp CGAGTCAGAGCACATGGCCTCAGGGTTGGGGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCCTTGGTCAGAGCTCTGGGCCTGTGT +
Preference number: 1 (lower is better)
Translates to: RVRAHGLRVGGECRG*GGSYGALVRALGLC
Trigger: ACACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp GCCTCCTCCGGCTCGCTGCTGTCCGAGGTCTCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTC +
Preference number: 1 (lower is better)
Translates to: ASSGSLLSEVSLLAN*GLKFTSSSPCKRIF
Trigger: GAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGAGACCTCGGACAGCAGCGAGCCGGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp ACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATaGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCT +
Preference number: 1 (lower is better)
Translates to: TWAAAVATWSSRSAR*VSSVPLWMQRAASS
Trigger: AGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 90 bp CCGGCTCGCTGCTGTCCGAGGTCTCCCTGCTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: PARCCPRSPCWPTGG*SSRPALHASASSQL
Trigger: CAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGAGACCTCGGACAGCAGCGAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp CCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCT +
Preference number: 1 (lower is better)
Translates to: PWPPGPPDPPDGSHQ*HCGCSGRHLLAQSA
Trigger: AGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR GCA 90 bp TTCATCCAGCCTGTCCACACTCTTCCAGCTGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTGGTCCCTTGGCTGCCTCGATGGAGC +
Preference number: 1 (lower is better)
Translates to: FIQPVHTLPAGQSRL*SRVLALVPWLPRWS
Trigger: GCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGGACAGGCTGGATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp GTGTGTCTAGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGG +
Preference number: 1 (lower is better)
Translates to: VCLDPGAGRWGKMVL*LALLSPVGLFSTSW
Trigger: CCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp GGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTC +
Preference number: 1 (lower is better)
Translates to: GPPDPPDGSHQCHCG*SGRHLLAQSAGSPV
Trigger: GACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp ACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCC +
Preference number: 1 (lower is better)
Translates to: TWSSRSARWVSSVPL*MQRAASSSSVSWVS
Trigger: GGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp ATCTGGAGTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGG +
Preference number: 1 (lower is better)
Translates to: IWSSAWWTWAAAVAT*SSRSARWVSSVPLW
Trigger: CCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp CTGGGGCCAGGTTTGTTTCATCCAGCCTGTCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTGGTCCCTTG +
Preference number: 1 (lower is better)
Translates to: LGPGLFHPACPHSSS*AEQTLLSGVGLGPL
Trigger: CAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGGACAGGCTGGATGAAACAAACCTGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp GTCAAAGTCTTCCTCGCTATCGGAGCCCATCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTCCAGGGCCTGAAACGTCCCGCTCTT +
Preference number: 1 (lower is better)
Translates to: VKVFLAIGAHLIVGR*HTGGHLQGLKRPAL
Trigger: AAGAGCGGGACGTTTCAGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAGATGGGCTCCGATAGCGAGGAAGACTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp GTTGAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTTCCTCTGCAACCAGGACAGTCTGGC +
Preference number: 1 (lower is better)
Translates to: VEVHVQLSMQAHLLS*RVPGGLPLQPGQSG
Trigger: GCCAGACTGTCCTGGTTGCAGAGGAAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATaGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: PPQAFSSGGNTYSTR*LLGQGTVVYGRRQW
Trigger: CCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 90 bp CAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGCCCTGTGCAATGGTGCACTGTGGCC +
Preference number: 1 (lower is better)
Translates to: QRVGKTAVLKSETAF*MRYQDSPVQWCTVA
Trigger: GGCCACAGTGCACCATTGCACAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 90 bp AATCATCCGACACCTGATGTGTGTCTAGATCCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGCTTGGCTCTTCTGAGCCCAGTCGGG +
Preference number: 1 (lower is better)
Translates to: NHPTPDVCLDPGAGR*GKMVLCLALLSPVG
Trigger: CCCGACTGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGTCGGATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATTCCATGGTGTCAGTACATCACAGCT +
Preference number: 1 (lower is better)
Translates to: RWLLGQGTVVYGRRQ*VTGSGIPWCQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 90 bp TGGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAGGTATCAGGACAGCCCTGTGCAATG +
Preference number: 1 (lower is better)
Translates to: WEPKAESGQDRSAEV*DGFLDEVSGQPCAM
Trigger: CATTGCACAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 90 bp AGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTG +
Preference number: 1 (lower is better)
Translates to: RPSPQVEIHTVLDGC*VKALSCTAGGSGSL
Trigger: CAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 90 bp TCTGAGACGGCTTTCTGGATGAGGTATCAGGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATAC +
Preference number: 1 (lower is better)
Translates to: SETAFWMRYQDSPVQ*CTVASPGLLLRWKY
Trigger: GTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 90 bp CCAGGCTGTCCCCATATGCCTCTGCTTTGGAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTAGGGCCACAGCCAAGGTGTCCATCA +
Preference number: 1 (lower is better)
Translates to: PGCPHMPLLWKLLPQ*PLQPPVGPQPRCPS
Trigger: TGATGGACACCTTGGCTGTGGCCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 90 bp TGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGT +
Preference number: 1 (lower is better)
Translates to: CPTRKHPLLSVRRDL*GLPGPCRSCYQLLC
Trigger: ACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp GTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTT +
Preference number: 1 (lower is better)
Translates to: VPLWMQRAASSSSVS*VSSPYTVPAARYTF
Trigger: AAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp GTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCTGACTCCAGAGCAGGCTCCATCAAA +
Preference number: 1 (lower is better)
Translates to: VVYGRRQWVTGSGIP*CQYITADSRAGSIK
Trigger: TTTGATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGACACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR GCA 90 bp GAGACGGCTTTCTGGATGAGGTATCAGGACAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATA +
Preference number: 1 (lower is better)
Translates to: ETAFWMRYQDSPVQW*TVASPGLLLRWKYI
Trigger: TATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 90 bp CCTGTGCAATGGTGCACTGTGGCCTCCCCAGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGT +
Preference number: 1 (lower is better)
Translates to: PVQWCTVASPGLLLR*KYIQYSMAVGSRHC
Trigger: ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR GCA 90 bp TCTGTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGCATTGATGACTTTCAGGACTTCTGT +
Preference number: 1 (lower is better)
Translates to: SVRRDLWGLPGPCRS*YQLLCGIDDFQDFC
Trigger: ACAGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp ACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGGTCTGTCCCACGAGGAAACATCCCC +
Preference number: 1 (lower is better)
Translates to: TVPAARYTFSSREVS*SSSLTWSVPRGNIP
Trigger: GGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp TATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: YTFSSREVSCSSSLT*SVPRGNIPFCLSGG
Trigger: CCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 90 bp AAGCTTTTAGCAGGAAGGAGGTGGCTGAAGGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAAATTAGACTGTCCCTAGTGCTCACT +
Preference number: 1 (lower is better)
Translates to: KLLAGRRWLKGDLQS*WLSNPQIRLSLVLT
Trigger: AGTGAGCACTAGGGACAGTCTAATTTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTGCTAAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR CCA 90 bp TACAGCCTGTTTCTCCGTTTCTCCTCTGTGGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTGCTGATGTCTGTCTCTGATAAATCA +
Preference number: 1 (lower is better)
Translates to: YSLFLRFSSVVSVRV*GSRASLLMSVSDKS
Trigger: TGATTTATCAGAGACAGACATCAGCAATGAGGCTCGGGATCCCCAGACTCTCACAGACACCACAGAGGAGAAACGGAGAAACAGGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR TCA 90 bp AACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTaGTGGTCTTTCTCAAGACCCTTTCCCCTTCAGATCTGGGCAACT +
Preference number: 1 (lower is better)
Translates to: NHIMLTLDSALKLSQ*WSFSRPFPLQIWAT
Trigger: AGTTGCCCAGATCTGAAGGGGAAAGGGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR TCA 90 bp CTATGGTTTGTACCTGGGTCCTTTGCTTCTGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGG +
Preference number: 1 (lower is better)
Translates to: LWFVPGSFASDPVFL*SAHMVLCLILQWSG
Trigger: CCCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAAACCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 90 bp TGTCTTCAGAGGACAGACTTTCCTTCTGGTTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCTCCCCTGAAGAAGTCTCCTTTTCAC +
Preference number: 1 (lower is better)
Translates to: CLQRTDFPSGSQILS*AQTPDPPLKKSPFH
Trigger: GTGAAAAGGAGACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGAACCAGAAGGAAAGTCTGTCCTCTGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 90 bp AGCAATCCCCAAATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTaGTTTTCCCTTAGGATTTGCAAGACAAAGATGCTTGTGAGAGAT +
Preference number: 1 (lower is better)
Translates to: SNPQIRLSLVLTAGT*FSLRICKTKMLVRD
Trigger: ATCTCTCACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAATTTGGGGATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR GCA 90 bp TTAGATGTGATCACTGCTAAACCACATCATGTTGACTCTGGACAGTaGCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCCTTTCC +
Preference number: 1 (lower is better)
Translates to: LDVITAKPHHVDSGQ*PKVEPVMVFLKTLS
Trigger: GGAAAGGGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTTAGCAGTGATCACATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTaGATCATAGCACACAAGTTAGCAGAAAATCAGATCTGGAAATGC +
Preference number: 1 (lower is better)
Translates to: ISKEYWKINVDPHQE*IIAHKLAENQIWKC
Trigger: GCATTTCCAGATCTGATTTTCTGCTAACTTGTGTGCTATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR TCA 90 bp CATCAAATCCTTGGTGGTGCCTTTCCTTTCCTTAGTCCTGTTTGTTaGGGAGCCTTGGAGAATGAAGTTGTGGTTAAATGTTTTAATGGT +
Preference number: 1 (lower is better)
Translates to: HQILGGAFPFLSPVC*GALENEVVVKCFNG
Trigger: ACCATTAAAACATTTAACCACAACTTCATTCTCCAAGGCTCCTCAACAAACAGGACTAAGGAAAGGAAAGGCACCACCAAGGATTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CAA 90 bp AGCTGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCTCCACTGGAGGGGTCTTCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: SWAEQTLLSGVGLGP*AASMEPPLEGSSGL
Trigger: AAGCCCTGAAGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CAA 90 bp GTCCACACTCTTCCAGCTGGGCAGAGCAGACTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTGCCTCGATGGAGCCTCCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: VHTLPAGQSRLCSRV*ALVPWLPRWSLHWR
Trigger: CCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR GCA 90 bp ACAGTCTGGCCTGGTGCCCAACTTCTCGGGAAGAGCCTGCGGAGGAGGTCTCCGCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 2 (lower is better)
Translates to: TVWPGAQLLGKSLRRRSPPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...CGGAGACCTCCTCCGCAGGCTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CAA 90 bp ACTCTTCCAGCTGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGATGGAGCCTCCACTGGAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: TLPAGQSRLCSRVLA*VPWLPRWSLHWRGL
Trigger: AAGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 2 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR GCA 90 bp TCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SSVPLWMQRAASSSSVSWSPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...CCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR GCA 90 bp TGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCGCCGGTCATCTGCCACCTTTGTaGTGCAACTCTGGGGATGTG +
Preference number: 2 (lower is better)
Translates to: CLALLSPVGLFSTSWPAGHLPPL*CNSGDV
Trigger: CACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATG...ACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp GTTCTTTGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VLCLALLSPVGLFSTSWPCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...GGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSDSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CAA 90 bp TGTGTGTCTAGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTG +
Preference number: 2 (lower is better)
Translates to: CVSRSRSWALGEDGS*LGSSEPSRALLHLL
Trigger: CAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR TCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR TCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 2 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp ACAGCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 2 (lower is better)
Translates to: TADSRAGSIKSLVVPFLSASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR GCA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDSPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWDSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CAA 90 bp GTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTaGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTC +
Preference number: 2 (lower is better)
Translates to: VCPTRKHPLLSVRRD*WGLPGPCRSCYQLL
Trigger: GAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR TCA 90 bp ACACCTGATGTGTGTCTAGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: TPDVCLDPGAGRWGKMVLWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...AAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp GGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: GGTCGDSQGPVDPAINSSEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...AGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 2 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CAA 90 bp CAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACT +
Preference number: 2 (lower is better)
Translates to: QAFSSGGNTYSTRWL*GQGTVVYGRRQWVT
Trigger: AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CAA 90 bp CTGGCCTCATTTTGCTTGTCCAGGCTGTCCCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATGGCCTCTTCAGCCACCCGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: LASFCLSRLSPYASA*EIASSMASSATRRA
Trigger: GGCCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTGGACAAGCAAAATGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR GCA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDGPCRS*YQLLCG
Trigger: GCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCC...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 2 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAAC +
Preference number: 2 (lower is better)
Translates to: WMQRAASSSSVSWVSSPYSSSLT*SVPRGN
Trigger: GTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGA...GTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CAA 90 bp AACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCA +
Preference number: 2 (lower is better)
Translates to: NMERCCWKPVSSFSV*DSPGSLRQRVGKTA
Trigger: TGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CAA 90 bp CATTTTGCTTGTCCAGGCTGTCCCCATATGCCTCTGCTTTGGAAATaGCTTCCTCAATGGCCTCTTCAGCCACCCGTAGGGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: HFACPGCPHMPLLWK*LPQWPLQPPVGPQP
Trigger: TGGCTGTGGCCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTGGACAAGCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR TCA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 2 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR GCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICSPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 2 (lower is better)
Translates to: WMQRAASSSSVSWVSSPYGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...GTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTTTGGGCTCAGACTCCTaGTCCTCCCCTGAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSLGSDS*SSPEEV
Trigger: GACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAA...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR GCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GSLRQRVGKTAVLKSETANHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR GCA 90 bp TTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTTGTGGCAGGCTGTCCCCATATaGCTCTGCTTTGGAAATTGC +
Preference number: 2 (lower is better)
Translates to: LVCPTRKHPLLSVRRDLWQAVPI*LCFGNC
Trigger: GCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTG...CCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 2 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: DIVSDSPGHGMSESELLICNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR GCA 90 bp TTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTTGTGGCTCACTGCAGGGACTTaGTTTTCCCTTAGGATTTGC +
Preference number: 2 (lower is better)
Translates to: LVCPTRKHPLLSVRRDLWLTAGT*FSLRIC
Trigger: GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAG...CCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 2 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVTWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CAA 90 bp GTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: VYIFFQGSQLLIQSH*VCPTRKHPLLSVRR
Trigger: CCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR TCA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR TCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: DIVSDSPGHGMSESELLIEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp CAGTTAGCTCCTCCTTGTGGTCCCGCAGGTAACTGGCCTCATTTTGCTTGTCCAACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 2 (lower is better)
Translates to: QLAPPCGPAGNWPHFACPTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACCACAAGGAGGAGCTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 2 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CAA 90 bp TGGGGATGTGGCCATCCTGGCTCTTCTTCCACTTGCTGCTCACTTTaGCTCTTCTGTTTTCGTATAATCTTCTGCAGGATTGTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: WGCGHPGSSSTCCSL*LFCFRIIFCRIVVA
Trigger: GGCCACGACAATCCTGCAGAAGATTATACGAAAACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CAA 90 bp GACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCTGTGGAGATGTTGCAGAGAGAAACA +
Preference number: 2 (lower is better)
Translates to: DSQGPVDPAINSSVA*MTFRTSVEMLQRET
Trigger: TGTTTCTCTCTGCAACATCTCCACAGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR TCA 90 bp GTGCTATGTTTAATCCTGCAATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: VLCLILQWSGLKSGSQYLARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...CAGATATTGAGAGCCGGATTTCAGCCCTGACCATTGCAGGATTAAACATAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR TCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATACAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 2 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR TCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCTGGGCATGGCATGAGTaGGTCAGAACTTCTCATCCT +
Preference number: 2 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTWAWHE*VRTSHP
Trigger: AGGATGAGAAGTTCTGACTCACTCATGCCATGCCCA...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGCCAGTCCATACACAGTaGCTGCTGCCAGGTATACAT +
Preference number: 2 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVPVHTQ*LLPGIH
Trigger: ATGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 2 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTTCCCCTTCAGATCTaGGCAACTGTCAGTAAGCCC +
Preference number: 2 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVFPLQI*ATVSKP
Trigger: GGGCTTACTGACAGTTGCCCAGATCTGAAGGGGAAA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 2 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR TCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: NRENMYLKHGALLLEASVARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 2 (lower is better)
Translates to: MYLKHGALLLEASVFIFCQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTGGGCATGGCATGAGTaGGTCAGAACTTCTCATCCT +
Preference number: 2 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICWAWHE*VRTSHP
Trigger: AGGATGAGAAGTTCTGACTCACTCATGCCATGCCCA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVLNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR GCA 90 bp ACACCTGATGTGTGTCTAGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTTTTTCCCTTAGGATTTaGAAGACAAAGATGCTTGTG +
Preference number: 2 (lower is better)
Translates to: TPDVCLDPGAGRWGKMVLFSLRI*KTKMLV
Trigger: CACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAA...AAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR GCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCCCTGTGGCTTGTGATTaGAAAGCGATGGGAATGACT +
Preference number: 2 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLPVACD*KAMGMT
Trigger: AGTCATTCCCATCGCTTTGCAATCACAAGCCACAGG...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATAGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 2 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp CTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGGCTACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 2 (lower is better)
Translates to: LLVKRTHGAMFNPAMVRATYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...AGCCCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATATGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: ISKEYWKINVDPHQEWIICLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR TCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: ENMYLKHGALLLEASVFIRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: ICILNMERCCWKPVSSFSRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR GCA 90 bp GACCTGGGACACAGCTTGCTCAAGGCCTCACTCCAGTCAAAGTCTTCCTCGCTAAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: DLGHSLLKASLQSKSSSLKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...TAGCGAGGAAGACTTTGACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR TCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGCTTTGGACAAATTGTTaGCATGGAATACTAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVLWTNC*HGILAE
Trigger: TTCAGCTAGTATTCCATGTCAACAATTTGTCCAAAG...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR TCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTCATCCTGTGGCTTGTaGTTGCAAAGCGATGGGAAT +
Preference number: 2 (lower is better)
Translates to: MYLKHGALLLEASVFIFCSSCGL*LQSDGN
Trigger: ATTCCCATCGCTTTGCAATCACAAGCCACAGGATGA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR GCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: MYLKHGALLLEASVFIFCLNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR GCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCTTTTCCCTTAGGATTTaGAAGACAAAGATGCTTGTG +
Preference number: 2 (lower is better)
Translates to: DIVSDSPGHGMSESELLIFSLRI*KTKMLV
Trigger: CACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAA...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCTGTCAGTAAGCCCATaGAAGAACCCTAAATTCTTA +
Preference number: 2 (lower is better)
Translates to: MYLKHGALLLEASVFIFCLSVSP*KNPKFL
Trigger: TAAGAATTTAGGGTTCTTCCATGGGCTTACTGACAG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR CAA 90 bp TCTCTCTGGCCTTCAGTTATTAAATCTGAAATATGGGAAAACCTATaGAATAAGGTTGCCATAAGGATTCAAATGAGAAGAACATTGCCT +
Preference number: 2 (lower is better)
Translates to: SLWPSVIKSEIWENL*NKVAIRIQMRRTLP
Trigger: AGGCAATGTTCTTCTCATTTGAATCCTTATGGCAACCTTATTCAATAGGTTTTCCCATATTTCAGATTTAATAACTGAAGGCCAGAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR GCA 72 bp GGGGCCTTCCTCTGCAACCAGGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAGCCTGCGGAGGAGGTC +
Preference number: 3 (lower is better)
Translates to: GAFLCNQDSLAW*PTSREEPAEEV
Trigger: GACCTCCTCCGCAGGCTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTGGTTGCAGAGGAAGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp CTGGGGGCCTTCCTCTGCAACCAGGACAGTCTGGCCTaGTGCCCAACTTCTCGGGAAGAGCCTGCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: LGAFLCNQDSLA*CPTSREEPAEE
Trigger: CTCCTCCGCAGGCTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTGGTTGCAGAGGAAGGCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp CAGTCTGGCCTGGTGCCCAACTTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTCAGAGCACATGGCCTC +
Preference number: 3 (lower is better)
Translates to: QSGLVPNFSGRA*GGGLRVRAHGL
Trigger: GAGGCCATGTGCTCTGACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp CTGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGATGGAGCCTCCACTGGA +
Preference number: 3 (lower is better)
Translates to: LGRADSALGCWP*SLGCLDGASTG
Trigger: TCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CAA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 3 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCSRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp CCTGTCCACACTCTTCCAGCTGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTGGTCCCTTGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: PVHTLPAGQSRL*SRVLALVPWLP
Trigger: AGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp TCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTG +
Preference number: 3 (lower is better)
Translates to: SAWWTWAAAVAT*SSRSARWVSSV
Trigger: CACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 72 bp CACTGGAGGGGTCTTCAGGGCTTCTTCTCCAGTGATTaGGAAGGCAGACTGGGACCTCCAGAGGGCAGCGGG +
Preference number: 3 (lower is better)
Translates to: HWRGLQGFFSSD*EGRLGPPEGSG
Trigger: CCCGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCCTGAAGACCCCTCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp CACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTTCCTCTGCAACCAGGA +
Preference number: 3 (lower is better)
Translates to: HVQLSMQAHLLS*RVPGGLPLQPG
Trigger: TCCTGGTTGCAGAGGAAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGGCGGCATCTTCTAGCT +
Preference number: 3 (lower is better)
Translates to: PGPPDPPDGSHQ*HCGCSGRHLLA
Trigger: AGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 72 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACAGTGCCTGCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: WMQRAASSSSVS*VSSPYTVPAAR
Trigger: CCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 72 bp TGCTGTCCGAGGTCTCCCTGCTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTCCATGCAAGCGCATCT +
Preference number: 3 (lower is better)
Translates to: CCPRSPCWPTGG*SSRPALHASAS
Trigger: AGATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGAGACCTCGGACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp TTCCTCGCTATCGGAGCCCATCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTCCAGGGCCTGAAACGT +
Preference number: 3 (lower is better)
Translates to: FLAIGAHLIVGR*HTGGHLQGLKR
Trigger: ACGTTTCAGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAGATGGGCTCCGATAGCGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp TCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: SRSARWVSSVPL*MQRAASSSSVS
Trigger: GCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 3 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp GGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGGGAGACCTGCAGTCTaGATGGTTGAGCAATCCCCA +
Preference number: 3 (lower is better)
Translates to: GGTCGDSQGPVDPAINSSGRPAV*MVEQSP
Trigger: TGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCC...AGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp CAGCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCT +
Preference number: 3 (lower is better)
Translates to: QLTPEQAPSNPWWCLSFPVGLGP*AASMEP
Trigger: AGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC...AGGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp AGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTGTCAGTACATCACAGC +
Preference number: 3 (lower is better)
Translates to: RHCRVRPEAVGH*QWNSMVSVHHS
Trigger: GCTGTGATGTACTGACACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 72 bp AAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAGGTATCAGGACAGCCC +
Preference number: 3 (lower is better)
Translates to: KAESGQDRSAEV*DGFLDEVSGQP
Trigger: GGGCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 72 bp GGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGCCCTGTGCAATGGTGC +
Preference number: 3 (lower is better)
Translates to: GKTAVLKSETAF*MRYQDSPVQWC
Trigger: GCACCATTGCACAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 72 bp CCCCATATGCCTCTGCTTTGGAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTAGGGCCACAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: PHMPLLWKLLPQ*PLQPPVGPQPR
Trigger: CCTTGGCTGTGGCCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp ACACCTGATGTGTGTCTAGATCCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGCTTGGCTCTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: TPDVCLDPGAGR*GKMVLCLALLS
Trigger: GCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CAA 90 bp TTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTTGTGGAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 3 (lower is better)
Translates to: LVCPTRKHPLLSVRRDLWSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...CCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCCAGCAGTTTTCCTTaGGACAAATTGTTGACATGG +
Preference number: 3 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSSSFP*DKLLTW
Trigger: CCATGTCAACAATTTGTCCAAAGGAAAACTGCTGGA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 72 bp CCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: PQVEIHTVLDGC*VKALSCTAGGS
Trigger: ACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 72 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATaGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGG +
Preference number: 3 (lower is better)
Translates to: AFSSGGNTYSTR*LLGQGTVVYGR
Trigger: CCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CCA 72 bp CCTCAGTTAGCTCCTCCTTGTGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCAGGCTGTCCCCATATG +
Preference number: 3 (lower is better)
Translates to: PQLAPPCGPAGN*PHFACPGCPHM
Trigger: CATATGGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACCACAAGGAGGAGCTAACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp AGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAA +
Preference number: 3 (lower is better)
Translates to: RKHPLLSVRRDL*GLPGPCRSCYQ
Trigger: TTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 72 bp TCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCC +
Preference number: 3 (lower is better)
Translates to: SISEIWSSAWWT*AAAVATWSSRS
Trigger: GGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGATTTCAGATATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp GAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTGCAGGGTTCCTAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 3 (lower is better)
Translates to: EVHVQLSMQAHLLSCRVPKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...AGGAACCCTGCAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CAA 90 bp GCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGTTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 3 (lower is better)
Translates to: AAAVATWSSRSARWVSSVFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...CACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp AGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGCATTGATGACTTTCAG +
Preference number: 3 (lower is better)
Translates to: RDLWGLPGPCRS*YQLLCGIDDFQ
Trigger: CTGAAAGTCATCAATGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CCA 72 bp TCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SSREVSCSSSLT*SVPRGNIPFCL
Trigger: CAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp CGTCTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGGACCTGGGACACAGCTaGCTCAAGGCCTCACTCCAG +
Preference number: 3 (lower is better)
Translates to: RLLVKRTHGAMFNPAMVRDLGHS*LKASLQ
Trigger: CTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC...CCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR TCA 72 bp GCAGGAAGGAGGTGGCTGAAGGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAAATTAGACTGTCCCTA +
Preference number: 3 (lower is better)
Translates to: AGRRWLKGDLQS*WLSNPQIRLSL
Trigger: TAGGGACAGTCTAATTTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR GCA 72 bp GCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGGTCTGTCCCACGAGGA +
Preference number: 3 (lower is better)
Translates to: AARYTFSSREVS*SSSLTWSVPRG
Trigger: TCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR GCA 72 bp CTCAGTCAGCTGGGTCTCCAGTCCATACACAGTGCCTaGTGCCAGGTATACATTTTCTTCCAGGGAAGTCAG +
Preference number: 3 (lower is better)
Translates to: LSQLGLQSIHSA*CQVYIFFQGSQ
Trigger: CTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR GCA 72 bp CTAGCTCAGTCAGCTGGGTCTCCAGTCCATACACAGTaGCTGCTGCCAGGTATACATTTTCTTCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: LAQSAGSPVHTQ*LLPGIHFLPGK
Trigger: CTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CCA 72 bp TTTCTCCGTTTCTCCTCTGTGGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTGCTGATGTCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: FLRFSSVVSVRV*GSRASLLMSVS
Trigger: AGAGACAGACATCAGCAATGAGGCTCGGGATCCCCAGACTCTCACAGACACCACAGAGGAGAAACGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR-3UTR CAA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 3 (lower is better)
Translates to: DIVSDSPGHGMSESELLISTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTTCCTTTGGACAAATaGTTGACATGGAATACTAGC +
Preference number: 3 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAFPLDK*LTWNTS
Trigger: GCTAGTATTCCATGTCAACAATTTGTCCAAAGGAAA...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR TCA 72 bp CACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTaGTGTATCTATGGTTTGTACCTGGGTCCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: HRWSRQFPPLLP*CIYGLYLGPLL
Trigger: AAGCAAAGGACCCAGGTACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 72 bp TGGCAGTGGAATTCCATGGTGTCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCATCAAATCCTTGGTGGT +
Preference number: 3 (lower is better)
Translates to: WQWNSMVSVHHS*LQSRLHQILGG
Trigger: ACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGACACCATGGAATTCCACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR GCA 72 bp ACTGGCCTCATTTTGCTTGTCCAGGCTGTCCCCATATaGCTCTGCTTTGGAAATTGCTTCCTCAATGGCCTC +
Preference number: 3 (lower is better)
Translates to: TGLILLVQAVPI*LCFGNCFLNGL
Trigger: GAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTGGACAAGCAAAATGAGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp GCTTTCACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTTTGTACCTGGGTCCTT +
Preference number: 3 (lower is better)
Translates to: AFTGGAGSFLLC*LDVSMVCTWVL
Trigger: AAGGACCCAGGTACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGTGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR GCA 72 bp TCAGCTTTCACCGGTGGAGCAGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATGGTTTGTACCTGGGTC +
Preference number: 3 (lower is better)
Translates to: SAFTGGAGSFLL*CLDVSMVCTWV
Trigger: GACCCAGGTACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR TCA 72 bp ATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTaGTGGTCTTTCTCAAGACCCTTTCCCCTTCAGATC +
Preference number: 3 (lower is better)
Translates to: MLTLDSALKLSQ*WSFSRPFPLQI
Trigger: GATCTGAAGGGGAAAGGGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR TCA 72 bp GTACCTGGGTCCTTTGCTTCTGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTATGTTTAATCCTGCAA +
Preference number: 3 (lower is better)
Translates to: VPGSFASDPVFL*SAHMVLCLILQ
Trigger: TTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGATCAGAAGCAAAGGACCCAGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR-3UTR CAA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATACATGGAGCGCTGCTGTaGGAAGCCAGTGTCTTCATT +
Preference number: 3 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIHGALL*EASVFI
Trigger: AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATG...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 3 (lower is better)
Translates to: ICILNMERCCWKPVSSFSSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR-3UTR CAA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 3 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR GCA 72 bp ATCACTGCTAAACCACATCATGTTGACTCTGGACAGTaGCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: ITAKPHHVDSGQ*PKVEPVMVFLK
Trigger: CTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTTAGCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCTAAACCACATCATGTaGACTCTGGACAGTGCCCTA +
Preference number: 3 (lower is better)
Translates to: MYLKHGALLLEASVFIFCLNHIM*TLDSAL
Trigger: TAGGGCACTGTCCAGAGTCAACATGATGTGGTTTAG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR CCA 72 bp TTCCCCTTCAGATCTGGGCAACTGTCAGTAAGCCCATaGAAGAACCCTAAATTCTTAATGAGACATTGTTTC +
Preference number: 3 (lower is better)
Translates to: FPFRSGQLSVSP*KNPKFLMRHCF
Trigger: GAAACAATGTCTCATTAAGAATTTAGGGTTCTTCCATGGGCTTACTGACAGTTGCCCAGATCTGAAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR CCA 72 bp GAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTaGATCATAGCACACAAGTTAGCAGAAAATCAGATC +
Preference number: 3 (lower is better)
Translates to: EYWKINVDPHQE*IIAHKLAENQI
Trigger: GATCTGATTTTCTGCTAACTTGTGTGCTATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CAA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 3 (lower is better)
Translates to: YGFKETTDMELESILVSISSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTCCAGCAGTTTTCCTTaGGACAAATTGTTGACATGG +
Preference number: 3 (lower is better)
Translates to: MYLKHGALLLEASVFIFCSSSFP*DKLLTW
Trigger: CCATGTCAACAATTTGTCCAAAGGAAAACTGCTGGA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCGCCGGTCTGTGGTGTaGGGGGCCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGRRSVV*GASSGS
Trigger: CGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCG...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGCGCTAAAGCTGGGCTaGAGCACCGCGGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVALKLG*STAGAR
Trigger: CCGAGCCCCCGCGGTGCTGCAGCCCAGCTTTAGCGC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCGCAACGCGCCGCGTaGATTAGAGGCTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWPQRAA*IRGCRR
Trigger: CCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCCGCAACGCGCCGCGTaGATTAGAGGCTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTPQRAA*IRGCRR
Trigger: CCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGG...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR CCA 90 bp AGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTCGCCGGTCTGTGGTGTaGGGGGCCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: RSARWVSSVPLWMQRAASRRSVV*GASSGS
Trigger: CGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCG...AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTGCGCCGGTCTGTGGTGTaGGGGGCCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: GTCGDSQGPVDPAINSSVRRSVV*GASSGS
Trigger: CGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCG...CACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCGCCGGTTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: CLALLSPVGLFSTSWPAGSAWWT*AAAVAT
Trigger: GGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA...ACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCATGGTGGACTTGGGCTaGAGCCGTGGCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGMVDLG*SRGHLV
Trigger: GACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCAT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGATGGTGGACTTGGGCTaGAGCCGTGGCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPMVDLG*SRGHLV
Trigger: GACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCAT...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTGGCCAGTAGTCGGGTaGGGGGTGGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVWPVVG*GVERHP
Trigger: AGGATGGCGCTCCACCCCCCACCCGACTACTGGCCA...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGGECRG*GGSYGA
Trigger: GGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCC...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: CSRGHLVLQIRQMGLISAGECRG*GGSYGA
Trigger: GGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCC...GGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGPGAGR*GKMVLC
Trigger: GCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGG...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVAAVAT*SSRSAR
Trigger: TCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTAAVAT*SSRSAR
Trigger: TCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSAWWT*AAAVAT
Trigger: GGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CAA 72 bp GAGCAGACTCTGCTCTCGGGTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCTCCACTGGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EQTLLSGVGLGP*AASMEPPLEGS
Trigger: AGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: AAAVATWSSRSARWVSSVAHLLS*RVPGGL
Trigger: AAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGC...CACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCTTGGCTGCCTCGATaGAGCCTCCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWPWLPR*SLHWRG
Trigger: ACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACAGGCAGATGCCACACTaGAGGCCACCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHRQMPH*RPPPGP
Trigger: AGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCT...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGAGGCAGATGCCACACTaGAGGCCACCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWRQMPH*RPPPGP
Trigger: AGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCT...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCGCAGCTATGGGGCCTTaGTCAGAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CSRGHLVLQIRQMGLISAAAMGP*SELWAC
Trigger: ACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGC...GGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCGAGTCAGAGCACATaGCCTCAGGGTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPPSQST*PQGWGR
Trigger: TCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGG...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGTCTAGATCCCGGAGCTaGGCGCTGGGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPSRSRS*ALGEDG
Trigger: ACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGA...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGAAVAT*SSRSAR
Trigger: TCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLAAVAT*SSRSAR
Trigger: TCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGC...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHSAWWT*AAAVAT
Trigger: GGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCCTCTGTGGTGTCTGTaGGAGTCTGGGGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTPLWCL*ESGDPE
Trigger: CTCGGGATCCCCAGACTCTCACAGACACCACAGAGG...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTFSGRA*GGGLRV
Trigger: GACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHAHLLS*RVPGGL
Trigger: AAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSAHLLS*RVPGGL
Trigger: AAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGC...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGQCHCG*SGRHLL
Trigger: TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTG...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCATGGTGGACTTGGGCTaGAGCCGTGGCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCMVDLG*SRGHLV
Trigger: GACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCAT...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GTTCTTTGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCGGCTTCCTCCTCGCTTaGTGGCAGACGCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: VLCLALLSPVGLFSTSWPGFLLA*WQTQQT
Trigger: GGTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAAGCC...GGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTCCTTGGCTGCCTCGATaGAGCCTCCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAPWLPR*SLHWRG
Trigger: ACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGG...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHSALGC*PWSLGC
Trigger: GCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTAGGCAGATGCCACACTaGAGGCCACCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGRQMPH*RPPPGP
Trigger: AGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCT...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTAGGCAGATGCCACACTaGAGGCCACCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETARQMPH*RPPPGP
Trigger: AGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCT...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCCGAGTCAGAGCACATaGCCTCAGGGTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVPSQST*PQGWGR
Trigger: TCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCAGGACAGTCTGGCCTaGTGCCCAACTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGQDSLA*CPTSRE
Trigger: TTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTG...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIPGAGR*GKMVLC
Trigger: GCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGG...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCTAGATCCCGGAGCTaGGCGCTGGGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSRSRS*ALGEDG
Trigger: ACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGGAGTTCAGCATGGTaGACTTGGGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGWSSAW*TWAAAV
Trigger: CACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCTGGAGTTCAGCATGGTaGACTTGGGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: CSRGHLVLQIRQMGLISAWSSAW*TWAAAV
Trigger: CACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCA...GGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTCCTCTGTGGTGTCTGTaGGAGTCTGGGGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAPLWCL*ESGDPE
Trigger: CTCGGGATCCCCAGACTCTCACAGACACCACAGAGG...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: CSRGHLVLQIRQMGLISARSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...GGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCGCCGGTGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: CLALLSPVGLFSTSWPAGGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...ACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTTCTTTGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: VLCLALLSPVGLFSTSWPPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...GGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSGQSRL*SRVLAL
Trigger: CAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCC...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWLIVGR*HTGGHL
Trigger: GAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAFSGRA*GGGLRV
Trigger: GACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAA...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTATTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLFSGRA*GGGLRV
Trigger: GACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAA...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHDSLAW*PTSREE
Trigger: CTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIAHLLS*RVPGGL
Trigger: AAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGC...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTAGAAGCCTCGCTTGCTaGCAGACGCAGCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIRSLAC*QTQQTQ
Trigger: CTGGGTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCT...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CCA 90 bp GTGCAGAGGATGGGGAGGCAGCTATGGGGCCTTGGTCAGAGCTCTGGGCCTGTGGGGATGTGGCCATCCTaGCTCTTCTTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: VQRMGRQLWGLGQSSGPVGMWPS*LFFHLL
Trigger: CAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCC...CACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCATCCTCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGATTGAGAAGGCAGACTaGGACCTCCAGAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVIEKAD*DLQRAA
Trigger: CGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAAT...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTATTGAGAAGGCAGACTaGGACCTCCAGAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTIEKAD*DLQRAA
Trigger: CGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAAT...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGILGCWP*SLGCLD
Trigger: ATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAG...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHPHSSS*AEQTLL
Trigger: GAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGG...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVPHSSS*AEQTLL
Trigger: GAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTGGCCAGTAGTCGGGTaGGGGGTGGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWWPVVG*GVERHP
Trigger: AGGATGGCGCTCCACCCCCCACCCGACTACTGGCCA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTATGGGGAGGCAGCTATaGGGCCTTGGTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTMGRQL*GLGQSS
Trigger: AGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCAT...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHSSVPL*MQRAAS
Trigger: AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGAGTTCAGCATGGTaGACTTGGGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHWSSAW*TWAAAV
Trigger: CACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGATCTGGAGTTCAGCATaGTGGACTTGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPIWSSA*WTWAAA
Trigger: GGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: CSRGHLVLQIRQMGLISAEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...GGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLDSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
3UTR CAA 72 bp AGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSRSWALGEDGS*LGSSEPSRALL
Trigger: GAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGCTTCTTCTCCAGTaGTTGAGAAGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTGLLLQ*LRRQTG
Trigger: CCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTTTGCTTGGCTCTTCTaGGCCCAGTCGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVFAWLF*AQSGSS
Trigger: AGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAA...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACACAGTGCCTCTGTGGTGTCTGTaGGAGTCTGGGGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: QRAASSSSVSWVSSPYTVPLWCL*ESGDPE
Trigger: CTCGGGATCCCCAGACTCTCACAGACACCACAGAGG...CACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: CSRGHLVLQIRQMGLISAGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...GGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCCAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGCCCTGGGCATGGCATaGGTGAGTCAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVALGMA*VSQNFS
Trigger: TGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGCGTGGATTAGAGGCTaGCGGCGGCGAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCAWIRG*RRRRRG
Trigger: GCCCCTTCTTCGCCGCCGGCAGCCTCTAATCCACGC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGTACGCCCAGGGCACCTaGCGCAACGCGCCGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRYAQGT*RNAPRG
Trigger: TCCACGCGGCGCGTTGCGGCAGGTGCCCTGGGCGTA...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR GCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGGGATGCTGCACTTGCTaGCTTCCTCATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPGCCTC*LPHPAS
Trigger: AGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCC...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTGASRG*CTCCLP
Trigger: AGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGCGAGCAGCAGCGCATaGAGCAGTGCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAASSSA*SSAPQT
Trigger: AGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCCACTCTCCAGCCGGTaGTTCCTGTACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTPLSSR*FLYRFF
Trigger: GAAGAACCTGTACAGGAAGCACCGGCTGGAGAGTGG...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCGCCGGTCAGGCTGTCCCCATATaGCTCTGCTTTGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: CLALLSPVGLFSTSWPAGQAVPI*LCFGNC
Trigger: GCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTG...ACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHTWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETADGSHQ*HCGCSG
Trigger: CCCGCTGCATCCACAGTGGCACTGATGAGACCCATC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGAGAAGCCTCGCTTGCTaGCAGACGCAGCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: SSVPLWMQRAASSSSVSWRSLAC*QTQQTQ
Trigger: CTGGGTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCT...CCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCPHSSS*AEQTLL
Trigger: GAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGG...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTATGGGGAGGCAGCTATaGGGCCTTGGTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIMGRQL*GLGQSS
Trigger: AGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCAT...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCGCCGGTCTGTGGTGTaGGGGGCCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALRRSVV*GASSGS
Trigger: CGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGCGCTGGGGGAAGATaGTTCTTTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSGAGGR*FFAWLF
Trigger: GAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCC...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGGCGCTGGGGGAAGATaGTTCTTTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVGAGGR*FFAWLF
Trigger: GAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHVSVRV*GSRASL
Trigger: CAATGAGGCTCGGGATCCCCAGACTCTCACAGACAC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSVSVRV*GSRASL
Trigger: CAATGAGGCTCGGGATCCCCAGACTCTCACAGACAC...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTTCAGCTTTCACCGGTaGAGCAGGCAGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGFSFHR*SRQFPP
Trigger: AGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGGGCTTCTTCTCCAGTaGTTGAGAAGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAGLLLQ*LRRQTG
Trigger: CCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAAATCATCCGACACCTaGTGTGTGTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGKSSDT*CVSRSR
Trigger: CCGGGATCTAGACACACATCAGGTGTCGGATGATTT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHSVHHS*LQSRLH
Trigger: ATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCGGGCGCGGGTCGGTCTaGGCGCTAAAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTGRGSV*ALKLGC
Trigger: GCAGCCCAGCTTTAGCGCGCAGACCGACCCGCGCCC...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGGGCGCGGGTCGGTCTaGGCGCTAAAGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALGRGSV*ALKLGC
Trigger: GCAGCCCAGCTTTAGCGCGCAGACCGACCCGCGCCC...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR GCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGGATGCTGCACTTGCTaGCTTCCTCATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVGCCTC*LPHPAS
Trigger: AGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWASRGC*TCCLPH
Trigger: ATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGC...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGGASRG*CTCCLP
Trigger: AGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACCAGTGCTCCACAAACTaGTGGTGCTTCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHQCSTN*WCFERM
Trigger: CATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTG...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTCAGCGCATGCAGCAGTaGTCCACAAACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GGTCGDSQGPVDPAINSSQRMQQ*STNCWC
Trigger: GCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTG...AGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp AGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTCTCAGAAGCCTCGCTTaGTGGCAGACGCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: RDLWGLPGPCRSCYQLLCLRSLA*WQTQQT
Trigger: GGTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCTGAG...ACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR GCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCCACTCTCCAGCCGGTaGTTCCTGTACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGPLSSR*FLYRFF
Trigger: GAAGAACCTGTACAGGAAGCACCGGCTGGAGAGTGG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCATCTGCCACCTTTGTaGTGCAACTCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTHLPPL*CNSGDV
Trigger: CACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATG...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGACGTCCAGCTCTCCATaGAAGCGCATCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVTSSSP*KRIFSA
Trigger: AGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGT...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGACGTCCAGCTCTCCATaGAAGCGCATCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWTSSSP*KRIFSA
Trigger: AGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGT...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSREVS*SSSLTW
Trigger: CCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCCAGTCCATACACAGTaGCTGCTGCCAGGTATACCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVPVHTQ*LLPGIP
Trigger: AGGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTTGCAATCTCCACACTaGCGCTTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTLQSPH*RLVLTR
Trigger: CCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTGCAATCTCCACACTaGCGCTTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHLQSPH*RLVLTR
Trigger: CCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTCCTTGGCTGCCTCGATaGAGCCTCCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCPWLPR*SLHWRG
Trigger: ACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGG...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTTGTGGCCTTGGCTGCCTCGATaGAGCCTCCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVCPTRKHPLLSVRRDLWPWLPR*SLHWRG
Trigger: ACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGG...CCACAAGTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGGGGCTCTGCAAAACTaGGGCCAGGTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWGALQN*GQVCFI
Trigger: GATGAAACAAACCTGGCCCCAGTTTTGCAGAGCCCC...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSSSLT*SVPRGN
Trigger: GTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTATCTGGAGTTCAGCATaGTGGACTTGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIIWSSA*WTWAAA
Trigger: GGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTATCTGGAGTTCAGCATaGTGGACTTGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAIWSSA*WTWAAA
Trigger: GGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTGCTGGCCAACTGGGGGTTGAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: LLANWGLKFTSSSPCKRIYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...GATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTTGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RDLWGLPGPCRSCYQLLCCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...ACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTGGTCCCTTGGCTGCCTCGTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: WAEQTLLSGVGLGPLAASSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...CGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCACTGCCAAAGCGCTTaGAGCGGCTCTTCACATTAT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVHCQSA*SGSSHY
Trigger: ATAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACACAGTGTTGGGCTCAGACTCCTaGTCCTCCCCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QRAASSSSVSWVSSPYTVLGSDS*SSPEEV
Trigger: GACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAA...CACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCCCTCCTTTGCTGCCTTaGTGTATCTATGGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: WTWAAAVATWSSRSARWVPPLLP*CIYGLY
Trigger: GTACAAACCATAGATACATCAAGGCAGCAAAGGAGG...GACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCTCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSSVHHS*LQSRLH
Trigger: ATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTTCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGSVHHS*LQSRLH
Trigger: ATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTTCCACAAACTGCTGGTaGTTCGAGAGGATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGISTNCW*FERMLH
Trigger: GTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGA...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGCAGCGCATGCAGCAGTaGTCCACAAACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWQRMQQ*STNCWC
Trigger: GCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTG...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCCATCTGCCACCTTTGTaGTGCAACTCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCHLPPL*CNSGDV
Trigger: CACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATG...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWDSLAW*PTSREE
Trigger: CTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWGKMVL*LALLSP
Trigger: TGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCC...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTATCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLSREVS*SSSLTW
Trigger: CCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGA...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACCCAGTCCATACACAGTaGCTGCTGCCAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHPVHTQ*LLPGIH
Trigger: ATGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTGCAATCTCCACACTaGCGCTTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETALQSPH*RLVLTR
Trigger: CCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAA...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTAACCATTCCAGAGATTaGGCCCTCAGAAGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETANHSRD*ALRSLA
Trigger: AGCGAGGCTTCTGAGGGCCCAATCTCTGGAATGGTT...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTCTGCAGGATTGTCGTaGCCAGTTCCTCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVSAGLS*PVPQLA
Trigger: AGCTAACTGAGGAACTGGCCACGACAATCCTGCAGA...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCLGCWP*SLGCLD
Trigger: ATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAG...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACCCGAGTCAGAGCACATaGCCTCAGGGTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDPSQST*PQGWGR
Trigger: TCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGG...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTTCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: SHQCHCGCSGRHLLAQSASLLAN*GLKFTS
Trigger: GGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGA...AGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGACCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGPGAGR*GKMVLC
Trigger: GCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGG...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AGTCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGTCTAGATCCCGGAGCTaGGCGCTGGGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SLTWSVPRGNIPFCLSGGSRSRS*ALGEDG
Trigger: ACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGA...CCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSSWTL*LLSSED
Trigger: GTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGVRRDL*GLPGPC
Trigger: ACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSSSLT*SVPRGN
Trigger: GTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACA +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHSSSVS*VSSPYT
Trigger: TGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVSAWWT*AAAVAT
Trigger: GGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGTGTTTAATCCTGCAATaGTCAGGGCTGAAATCCGGC +
Preference number: 4 (lower is better)
Translates to: AAAVATWSSRSARWVSSVCLILQ*SGLKSG
Trigger: GCCGGATTTCAGCCCTGACCATTGCAGGATTAAACA...CACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGTGGGTCACTGGCAGTaGAATTCCATGGTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVVGHWQ*NSMVSV
Trigger: TACTGACACCATGGAATTCCACTGCCAGTGACCCAC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTTCCCCTTCAGATCTaGGCAACTGTCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHFPLQI*ATVSKP
Trigger: GGGCTTACTGACAGTTGCCCAGATCTGAAGGGGAAA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGCCACCTCCAGGGCCTaGAACGTCCCGCTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRATSRA*NVPLLG
Trigger: ACCTAAGAGCGGGACGTTTCAGGCCCTGGAGGTGGC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCCGAGCCTCATTGCTaGTGTCTGTCTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWPEPHC*CLSLIN
Trigger: ATTTATCAGAGACAGACATCAGCAATGAGGCTCGGG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTTGGGCTCAGACTCCTaGTCCTCCCCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWLGSDS*SSPEEV
Trigger: GACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTGCTGGCCAACTGGGGGTTGAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTA +
Preference number: 4 (lower is better)
Translates to: LLANWGLKFTSSSPCKRIDPVFL*SAHMVL
Trigger: TAGCACCATGTGTGCGCTTCACAAGAAGACGGGATC...GATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp AGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RDLWGLPGPCRSCYQLLCRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...ACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCATCCTGTGGCTTGTaGTTGCAAAGCGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSSCGL*LQSDGN
Trigger: ATTCCCATCGCTTTGCAATCACAAGCCACAGGATGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGCGTGGATTAGAGGCTaGCGGCGGCGAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCAWIRG*RRRRRG
Trigger: GCCCCTTCTTCGCCGCCGGCAGCCTCTAATCCACGC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTCCTCATCCAGCTTCTaGTTCAGCTCACTTAGTCGT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWSSSSF*FSSLSR
Trigger: ACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACACAGTGGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QRAASSSSVSWVSSPYTVASRGC*TCCLPH
Trigger: ATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGC...CACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWGASRG*CTCCLP
Trigger: AGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHQCHCGCSGRHLLAQSAGASRG*CTCCLP
Trigger: AGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACC...AGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCCTCAGAAGCCTCGCTTaGTGGCAGACGCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVLRSLA*WQTQQT
Trigger: GGTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCTGAG...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR GCA 90 bp TGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WTWAAAVATWSSRSARWVNHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...GACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGGTCCCCATATGCCTCTaGTTTGGAAATTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWVPICL*FGNCFL
Trigger: GAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGAC...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTCATCTGCCACCTTTGTaGTGCAACTCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: GGTCGDSQGPVDPAINSSHLPPL*CNSGDV
Trigger: CACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATG...AGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTGGGCTGCAGCCGCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GSQYLKSGVQHGGLGLQPPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...CGGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACACAGTGACGTCCAGCTCTCCATaGAAGCGCATCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QRAASSSSVSWVSSPYTVTSSSP*KRIFSA
Trigger: AGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGT...CACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ACAGTCTGGCCTGGTGCCCAACTTCTCGGGAAGAGCCTGCGGAGGAGGTCTCCGTCCATACACAGTGCCTaGTGCCAGGTATACATTTTC +
Preference number: 4 (lower is better)
Translates to: TVWPGAQLLGKSLRRRSPSIHSA*CQVYIF
Trigger: GAAAATGTATACCTGGCAGCAGGCACTGTGTATGGA...CGGAGACCTCCTCCGCAGGCTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVLNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWLNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTCCATACACAGTGCCTaGTGCCAGGTATACCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSSIHSA*CQVYLL
Trigger: AAGAAGGTATACCTGGCAGCAGGCACTGTGTATGGA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACCCAGCTTCCTCCCCATaGTTACTCAACACAGATGAT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHPASSP*LLNTDD
Trigger: ATCATCTGTGTTGAGTAACCATGGGGAGGAAGCTGG...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTTCTGCAGGATTGTCGTaGCCAGTTCCTCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGISAGLS*PVPQLA
Trigger: AGCTAACTGAGGAACTGGCCACGACAATCCTGCAGA...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTTCTGCAGGATTGTCGTaGCCAGTTCCTCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGSAGLS*PVPQLA
Trigger: AGCTAACTGAGGAACTGGCCACGACAATCCTGCAGA...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ACACCTGATGTGTGTCTAGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPDVCLDPGAGRWGKMVLFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...AAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGGCCAGTAGTCGGGTaGGGGGTGGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVWPVVG*GVERHP
Trigger: AGGATGGCGCTCCACCCCCCACCCGACTACTGGCCA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGATGCCACACTaGAGGCCACCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSRQMPH*RPPPGP
Trigger: AGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCT...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCGCAGCTATGGGGCCTTaGTCAGAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVAAMGP*SELWAC
Trigger: ACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGC...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: HSACCQVYIFFQGSQLLIGECRG*GGSYGA
Trigger: GGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCC...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCGCCGGTCTGTGGTGTaGGGGGCCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVRRSVV*GASSGS
Trigger: CGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTCTAGATCCCGGAGCTaGGCGCTGGGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLSRSRS*ALGEDG
Trigger: ACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWSQILS*AQTPDP
Trigger: AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHSQILS*AQTPDP
Trigger: AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSFFSSS*TLWLLS
Trigger: AGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HSACCQVYIFFQGSQLLIVRRDL*GLPGPC
Trigger: ACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGISSSLT*SVPRGN
Trigger: GTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGA...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGATCTGGAGTTCAGCATaGTGGACTTGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWIWSSA*WTWAAA
Trigger: GGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGTGTTTAATCCTGCAATaGTCAGGGCTGAAATCCGGC +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVCLILQ*SGLKSG
Trigger: GCCGGATTTCAGCCCTGACCATTGCAGGATTAAACA...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHGSGIP*CQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGTGGGTCACTGGCAGTaGAATTCCATGGTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGVGHWQ*NSMVSV
Trigger: TACTGACACCATGGAATTCCACTGCCAGTGACCCAC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGTGGGTCACTGGCAGTaGAATTCCATGGTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAVGHWQ*NSMVSV
Trigger: TACTGACACCATGGAATTCCACTGCCAGTGACCCAC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETASETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTTCCCCTTCAGATCTaGGCAACTGTCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAFPLQI*ATVSKP
Trigger: GGGCTTACTGACAGTTGCCCAGATCTGAAGGGGAAA...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGACCCCCATCAGGAGTaGATCATAGCACACAAGTTA +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSDPHQE*IIAHKL
Trigger: TAACTTGTGTGCTATGATCCACTCCTGATGGGGGTC...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCATTCTCCAGGTTTaGCTCAAAAAGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHFILQV*LKKASS
Trigger: GGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTTCATTCTCCAGGTTTaGCTCAAAAAGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWFILQV*LKKASS
Trigger: GGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTTTCTTCTCCAGTGATTaGGAAGGCAGACTGGGACCT +
Preference number: 4 (lower is better)
Translates to: GGTCGDSQGPVDPAINSSFFSSD*EGRLGP
Trigger: AGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAA...AGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGCCACCTCCAGGGCCTaGAACGTCCCGCTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALATSRA*NVPLLG
Trigger: ACCTAAGAGCGGGACGTTTCAGGCCCTGGAGGTGGC...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTGCCACCTCCAGGGCCTaGAACGTCCCGCTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCATSRA*NVPLLG
Trigger: ACCTAAGAGCGGGACGTTTCAGGCCCTGGAGGTGGC...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGCCACCTCCAGGGCCTaGAACGTCCCGCTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCATSRA*NVPLLG
Trigger: ACCTAAGAGCGGGACGTTTCAGGCCCTGGAGGTGGC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACCCTCCTTTGCTGCCTTaGTGTATCTATGGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHPPLLP*CIYGLY
Trigger: GTACAAACCATAGATACATCAAGGCAGCAAAGGAGG...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTCCTCCTTTGCTGCCTTaGTGTATCTATGGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSPPLLP*CIYGLY
Trigger: GTACAAACCATAGATACATCAAGGCAGCAAAGGAGG...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTTCATCCTGTGGCTTGTaGTTGCAAAGCGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGSSCGL*LQSDGN
Trigger: ATTCCCATCGCTTTGCAATCACAAGCCACAGGATGA...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWASRGC*TCCLPH
Trigger: ATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTGCAGGGTTCCTGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EVHVQLSMQAHLLSCRVPGASRG*CTCCLP
Trigger: AGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACC...AGGAACCCTGCAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGCGAGCAGCAGCGCATaGAGCAGTGCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGASSSA*SSAPQT
Trigger: AGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGC...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCTCAGAAGCCTCGCTTaGTGGCAGACGCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGLRSLA*WQTQQT
Trigger: GGTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCTGAG...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR GCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGNHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCTCTGCTTTGGAAATTaGTTCCTCAATGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVLCFGN*FLNGLF
Trigger: GAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTCTCTGCTTTGGAAATTaGTTCCTCAATGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSLCFGN*FLNGLF
Trigger: GAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAG...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGTCCCCATATGCCTCTaGTTTGGAAATTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAVPICL*FGNCFL
Trigger: GAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGAC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCTTCTTCCACTTGCTaGTCACTTTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSSSTC*SLLLFC
Trigger: ACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGA...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGQSRL*SRVLAL
Trigger: CAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGDSLAW*PTSREE
Trigger: CTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTC...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWSREVS*SSSLTW
Trigger: CCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTGGGCTGCAGCCGGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GSQYLKSGVQHGGLGLQPDGSHQ*HCGCSG
Trigger: CCCGCTGCATCCACAGTGGCACTGATGAGACCCATC...CGGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCATGGTGGACTTGGGCTaGAGCCGTGGCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTMVDLG*SRGHLV
Trigger: GACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCAT...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTATGGTGGACTTGGGCTaGAGCCGTGGCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCMVDLG*SRGHLV
Trigger: GACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCAT...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATG +
Preference number: 4 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHGSFLL*CLDVSM
Trigger: CATAGATACATCAAGGCAGCAAAGGAGGAAACTGCC...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKASPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCTTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCLNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCTCACTGCAGGGACTTaGTTTTCCCTTAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGLTAGT*FSLRIC
Trigger: GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCCGCAACGCGCCGCGTaGATTAGAGGCTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVPQRAA*IRGCRR
Trigger: CCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR CCA 90 bp TCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTTGCTCCACAAACTGCTaGTGCTTCGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SHQCHCGCSGRHLLAQSACSTNC*CFERML
Trigger: CAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCA...AGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWGPAGN*PHFACP
Trigger: TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGGGATGTGGCCATCCTaGCTCTTCTTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCGMWPS*LFFHLL
Trigger: CAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCCTTGGCTGCCTCGATaGAGCCTCCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCPWLPR*SLHWRG
Trigger: ACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGG...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGSALGC*PWSLGC
Trigger: GCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTGGCCAGTAGTCGGGTaGGGGGTGGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTWPVVG*GVERHP
Trigger: AGGATGGCGCTCCACCCCCCACCCGACTACTGGCCA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGCAGCTATGGGGCCTTaGTCAGAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSAAMGP*SELWAC
Trigger: ACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGC...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGATGGGGAGGCAGCTATaGGGCCTTGGTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLMGRQL*GLGQSS
Trigger: AGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCAT...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCGECRG*GGSYGA
Trigger: GGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGECRG*GGSYGA
Trigger: GGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCCGAGTCAGAGCACATaGCCTCAGGGTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGPSQST*PQGWGR
Trigger: TCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGG...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGSLLAN*GLKFTS
Trigger: GGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCGCCGGTCTGTGGTGTaGGGGGCCTCCTCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCRRSVV*GASSGS
Trigger: CGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALPGAGR*GKMVLC
Trigger: GCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATCTAGATCCCGGAGCTaGGCGCTGGGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSSRSRS*ALGEDG
Trigger: ACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATGGAGTTCAGCATGGTaGACTTGGGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGWSSAW*TWAAAV
Trigger: CACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGGSGIP*CQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATGCAATGGTGCACTGTaGCCTCCCCAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSCNGAL*PPQAFS
Trigger: GGAGAAGGCCTGGGGAGGCCACAGTGCACCATTGCA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRDSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCATCAGCAAGGAGTACTaGAAGATTAATGTAGACCCC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGISKEY*KINVDP
Trigger: GGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
3UTR CAA 72 bp TGTCCAGGCTGTCCCCATATGCCTCTGCTTTGGAAATaGCTTCCTCAATGGCCTCTTCAGCCACCCGTAGGG +
Preference number: 4 (lower is better)
Translates to: CPGCPHMPLLWK*LPQWPLQPPVG
Trigger: CCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTAGCTCTTGCAGACATTaGATTTGCAATCTCCACACT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSSCRH*ICNLHT
Trigger: AGTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCT...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp ACAGCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCGGGCTTCTTCTCCAGTaGTTGAGAAGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: TADSRAGSIKSLVVPFLSGLLLQ*LRRQTG
Trigger: CCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCC...GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTAAATCATCCGACACCTaGTGTGTGTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: SHQCHCGCSGRHLLAQSAKSSDT*CVSRSR
Trigger: CCGGGATCTAGACACACATCAGGTGTCGGATGATTT...AGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATTGGGCTCAGACTCCTaGTCCTCCCCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGLGSDS*SSPEEV
Trigger: GACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCDPVFL*SAHMVL
Trigger: TAGCACCATGTGTGCGCTTCACAAGAAGACGGGATC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GACCTGGGACACAGCTTGCTCAAGGCCTCACTCCAGTCAAAGTCTTCCTCGCTATCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: DLGHSLLKASLQSKSSSLSVHHS*LQSRLH
Trigger: ATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA...TAGCGAGGAAGACTTTGACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTGGGCATGGCATGAGTaGGTCAGAACTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWWAWHE*VRTSHP
Trigger: AGGATGAGAAGTTCTGACTCACTCATGCCATGCCCA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCTCCTCATCCAGCTTCTaGTTCAGCTCACTTAGTCGT +
Preference number: 4 (lower is better)
Translates to: VRRDLWGLPGPCRSCYQLSSSSF*FSSLSR
Trigger: ACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGA...GAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGCGCATGCAGCAGTaGTCCACAAACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRQRMQQ*STNCWC
Trigger: GCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCCCACTCTCCAGCCGGTaGTTCCTGTACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVPLSSR*FLYRFF
Trigger: GAAGAACCTGTACAGGAAGCACCGGCTGGAGAGTGG...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTTTCGTATAATCTTCTaGAGGATTGTCGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSFRIIF*RIVVAS
Trigger: ACTGGCCACGACAATCCTGCAGAAGATTATACGAAA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTCTTCTTCCACTTGCTaGTCACTTTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTSSSTC*SLLLFC
Trigger: ACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGQSRL*SRVLAL
Trigger: CAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCGQSRL*SRVLAL
Trigger: CAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRLIVGR*HTGGHL
Trigger: GAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCTTACTCATCGTAGGCAGATaGCACACTGGAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: ADSRAGSIKSLVVPFLSLLIVGR*HTGGHL
Trigger: GAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAG...TAAGGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCFSGRA*GGGLRV
Trigger: GACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALAHLLS*RVPGGL
Trigger: AAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGC...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLGPCRS*YQLLCG
Trigger: GCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCC...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGATACACAGTGCCTGCTaGCAGGTATACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWIHSAC*QVYIFF
Trigger: GAAGAAAATGTATACCTGGCAGCAGGCACTGTGTAT...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCTCCATACACAGTGCCTaGTGCCAGGTATACATTTTC +
Preference number: 4 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCSIHSA*CQVYIF
Trigger: GAAAATGTATACCTGGCAGCAGGCACTGTGTATGGA...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRQCHCG*SGRHLL
Trigger: TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSDGSHQ*HCGCSG
Trigger: CCCGCTGCATCCACAGTGGCACTGATGAGACCCATC...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVSPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTSPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGCTCCACAAACTGCTaGTGCTTCGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCCSTNC*CFERML
Trigger: CAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp AGTCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGTTGCAATCTCCACACTaGCGCTTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: SLTWSVPRGNIPFCLSGGLQSPH*RLVLTR
Trigger: CCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAA...CCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCGPAGN*PHFACP
Trigger: TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGGATGTGGCCATCCTaGCTCTTCTTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGGMWPS*LFFHLL
Trigger: CAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCC...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGATTGAGAAGGCAGACTaGGACCTCCAGAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRIEKAD*DLQRAA
Trigger: CGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAAT...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCATCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKASALGC*PWSLGC
Trigger: GCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGA...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCAGGCAGATGCCACACTaGAGGCCACCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVRQMPH*RPPPGP
Trigger: AGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCT...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGCAGCTATGGGGCCTTaGTCAGAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVAAMGP*SELWAC
Trigger: ACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCATGGGGAGGCAGCTATaGGGCCTTGGTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGMGRQL*GLGQSS
Trigger: AGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCAT...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACCGAGTCAGAGCACATaGCCTCAGGGTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAPSQST*PQGWGR
Trigger: TCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGG...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCAGGACAGTCTGGCCTaGTGCCCAACTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGQDSLA*CPTSRE
Trigger: TTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTG...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTCCCGGAGCTGGGCGCTaGGGGAAGATGGTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTPGAGR*GKMVLC
Trigger: GCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGG...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTCTAGATCCCGGAGCTaGGCGCTGGGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCSRSRS*ALGEDG
Trigger: ACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLVSVRV*GSRASL
Trigger: CAATGAGGCTCGGGATCCCCAGACTCTCACAGACAC...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTGTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GTCGDSQGPVDPAINSSVSQILS*AQTPDP
Trigger: AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGA...CACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLVRRDL*GLPGPC
Trigger: ACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACA +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWSSSVS*VSSPYT
Trigger: TGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAATCTGGAGTTCAGCATaGTGGACTTGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGIWSSA*WTWAAA
Trigger: GGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SSVPLWMQRAASSSSVSWTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...CCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 4 (lower is better)
Translates to: GGTCGDSQGPVDPAINSSGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...AGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKADSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTTCCTCCTCGCTTGCTaGCAGACGCAGCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTFLLAC*QTQQTQ
Trigger: CTGGGTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396217.7
ENST00000458441.5
CDS-3UTR CCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTTTCCTCCTCGCTTGCTaGCAGACGCAGCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCFLLAC*QTQQTQ
Trigger: CTGGGTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAA...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGGGCTTCTTCTCCAGTaGTTGAGAAGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGGLLLQ*LRRQTG
Trigger: CCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCC...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTTTGCTTGGCTCTTCTaGGCCCAGTCGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGFAWLF*AQSGSS
Trigger: AGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATTTGCTTGGCTCTTCTaGGCCCAGTCGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSFAWLF*AQSGSS
Trigger: AGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTAAATCATCCGACACCTaGTGTGTGTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCKSSDT*CVSRSR
Trigger: CCGGGATCTAGACACACATCAGGTGTCGGATGATTT...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TCCCGTCTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCCCTCTGTGGTGTCTGTaGGAGTCTGGGGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: SRLLVKRTHGAMFNPAMVPLWCL*ESGDPE
Trigger: CTCGGGATCCCCAGACTCTCACAGACACCACAGAGG...GACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCCCTCTGTGGTGTCTGTaGGAGTCTGGGGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIPLWCL*ESGDPE
Trigger: CTCGGGATCCCCAGACTCTCACAGACACCACAGAGG...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCTTGGGCTCAGACTCCTaGTCCTCCCCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: HSACCQVYIFFQGSQLLILGSDS*SSPEEV
Trigger: GACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAA...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGACGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: GLQSIHSACCQVYIFFQGRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...TCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCCAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGCATGGCATGAGTaGGTCAGAACTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCWAWHE*VRTSHP
Trigger: AGGATGAGAAGTTCTGACTCACTCATGCCATGCCCA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGCGCTAAAGCTGGGCTaGAGCACCGCGGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIALKLG*STAGAR
Trigger: CCGAGCCCCCGCGGTGCTGCAGCCCAGCTTTAGCGC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATAGCGTGGATTAGAGGCTaGCGGCGGCGAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIAWIRG*RRRRRG
Trigger: GCCCCTTCTTCGCCGCCGGCAGCCTCTAATCCACGC...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTACGCCCAGGGCACCTaGCGCAACGCGCCGCGTGGA +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIYAQGT*RNAPRG
Trigger: TCCACGCGGCGCGTTGCGGCAGGTGCCCTGGGCGTA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTCCTCATCCAGCTTCTaGTTCAGCTCACTTAGTCGT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWSSSSF*FSSLSR
Trigger: ACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TTCTGCAGGATTGTCGTGGCCAGTTCCTCAGTTAGCTCCTCCTTGTGGTCCCGCTCCTCATCCAGCTTCTaGTTCAGCTCACTTAGTCGT +
Preference number: 4 (lower is better)
Translates to: FCRIVVASSSVSSSLWSRSSSSF*FSSLSR
Trigger: ACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGA...GCGGGACCACAAGGAGGAGCTAACTGAGGAACTGGCCACGACAATCCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTCCACAAACTGCTGGTaGTTCGAGAGGATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVSTNCW*FERMLH
Trigger: GTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGCAGTGCTCCACAAACTaGTGGTGCTTCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLQCSTN*WCFERM
Trigger: CATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTG...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCAGCGCATGCAGCAGTaGTCCACAAACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCQRMQQ*STNCWC
Trigger: GCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTG...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCGCGAGCAGCAGCGCATaGAGCAGTGCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTASSSA*SSAPQT
Trigger: AGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGC...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTGCGAGCAGCAGCGCATaGAGCAGTGCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCASSSA*SSAPQT
Trigger: AGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGC...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCACTCTCCAGCCGGTaGTTCCTGTACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRPLSSR*FLYRFF
Trigger: GAAGAACCTGTACAGGAAGCACCGGCTGGAGAGTGG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTGCTCTGCTTTGGAAATTaGTTCCTCAATGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GTCGDSQGPVDPAINSSVLCFGN*FLNGLF
Trigger: GAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAG...CACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp AGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTGTCCCCATATGCCTCTaGTTTGGAAATTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDLWGLPGPCRSCYQLLCVPICL*FGNCFL
Trigger: GAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGAC...ACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTLIVGR*HTGGHL
Trigger: GAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAG...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLQSIHSACCQVYIFFQGTWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...TCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTDSLAW*PTSREE
Trigger: CTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGPCRS*YQLLCG
Trigger: GCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGGPCRS*YQLLCG
Trigger: GCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCC...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACCCAGTCCATACACAGTaGCTGCTGCCAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDPVHTQ*LLPGIH
Trigger: ATGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCQCHCG*SGRHLL
Trigger: TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTG...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAQCHCG*SGRHLL
Trigger: TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTG...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCDGSHQ*HCGCSG
Trigger: CCCGCTGCATCCACAGTGGCACTGATGAGACCCATC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTT +
Preference number: 4 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSSFLLC*LDVSMV
Trigger: AACCATAGATACATCAAGGCAGCAAAGGAGGAAACT...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATG +
Preference number: 4 (lower is better)
Translates to: VRRDLWGLPGPCRSCYQLGSFLL*CLDVSM
Trigger: CATAGATACATCAAGGCAGCAAAGGAGGAAACTGCC...GAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTTTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SHQCHCGCSGRHLLAQSALNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...AGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGCCAGCTTCCTCCCCATaGTTACTCAACACAGATGAT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWPASSP*LLNTDD
Trigger: ATCATCTGTGTTGAGTAACCATGGGGAGGAAGCTGG...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGGGATGTGGCCATCCTaGCTCTTCTTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGGMWPS*LFFHLL
Trigger: CAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCC...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGTTTGTGCTGCAACTCTaGGGATGTGGCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRFVLQL*GCGHPG
Trigger: GCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAA...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTATTGAGAAGGCAGACTaGGACCTCCAGAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCIEKAD*DLQRAA
Trigger: CGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAAT...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTLGCWP*SLGCLD
Trigger: ATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAG...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTTCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLSALGC*PWSLGC
Trigger: GCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGA...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICSALGC*PWSLGC
Trigger: GCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALPHSSS*AEQTLL
Trigger: GAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCCCGAGTCAGAGCACATaGCCTCAGGGTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIPSQST*PQGWGR
Trigger: TCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGG...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGGCGCTGGGGGAAGATaGTTCTTTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGGAGGR*FFAWLF
Trigger: GAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCC...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGCGCTGGGGGAAGATaGTTCTTTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGAGGR*FFAWLF
Trigger: GAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCSSWTL*LLSSED
Trigger: GTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWFFSSS*TLWLLS
Trigger: AGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTSSVPL*MQRAAS
Trigger: AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVAAVAT*SSRSAR
Trigger: TCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICDSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGAAAGACACAGGGCTCTaGGTAGAGAGCAATACCAGA +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWKDTGL*VESNTR
Trigger: TCTGGTATTGCTCTCTACCCAGAGCCCTGTGTCTTT...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539167.2
3UTR CAA 72 bp GTGGTGTCTGTGAGAGTCTGGGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGATAAATCATCCGACACC +
Preference number: 4 (lower is better)
Translates to: VVSVRVWGSRAS*LMSVSDKSSDT
Trigger: GGTGTCGGATGATTTATCAGAGACAGACATCAGCAATGAGGCTCGGGATCCCCAGACTCTCACAGACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
3UTR CAA 72 bp TTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FFQGSQLLIQSH*VCPTRKHPLLS
Trigger: AGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTTCATTCTCCAGGTTTaGCTCAAAAAGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWFILQV*LKKASS
Trigger: GGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATTCTTCTCCAGTGATTaGGAAGGCAGACTGGGACCT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGFFSSD*EGRLGP
Trigger: AGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTTCTTCTCCAGTGATTaGGAAGGCAGACTGGGACCT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLFFSSD*EGRLGP
Trigger: AGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGGGCTTCTTCTCCAGTaGTTGAGAAGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAGLLLQ*LRRQTG
Trigger: CCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCC...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTTTGCTTGGCTCTTCTaGGCCCAGTCGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCFAWLF*AQSGSS
Trigger: AGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTTGGGCTCAGACTCCTaGTCCTCCCCTGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCLGSDS*SSPEEV
Trigger: GACTTCTTCAGGGGAGGATCAGGAGTCTGAGCCCAA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGCCTCCTTTGCTGCCTTaGTGTATCTATGGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWPPLLP*CIYGLY
Trigger: GTACAAACCATAGATACATCAAGGCAGCAAAGGAGG...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCCAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGCGCTAAAGCTGGGCTaGAGCACCGCGGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIALKLG*STAGAR
Trigger: CCGAGCCCCCGCGGTGCTGCAGCCCAGCTTTAGCGC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSASRGC*TCCLPH
Trigger: ATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGC...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCCAGCGCATGCAGCAGTaGTCCACAAACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIQRMQQ*STNCWC
Trigger: GCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTG...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCACATCTGCCACCTTTGTaGTGCAACTCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSHLPPL*CNSGDV
Trigger: CACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATG...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICLIVGR*HTGGHL
Trigger: GAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAG...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCTWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTT +
Preference number: 4 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSSFLLC*LDVSMV
Trigger: AACCATAGATACATCAAGGCAGCAAAGGAGGAAACT...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATG +
Preference number: 4 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWGSFLL*CLDVSM
Trigger: CATAGATACATCAAGGCAGCAAAGGAGGAAACTGCC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTTTTCCCTTAGGATTTaGAAGACAAAGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTFSLRI*KTKMLV
Trigger: CACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAA...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTTTTCCCTTAGGATTTaGAAGACAAAGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWFSLRI*KTKMLV
Trigger: CACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp AGTCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGCTCACTGCAGGGACTTaGTTTTCCCTTAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: SLTWSVPRGNIPFCLSGGLTAGT*FSLRIC
Trigger: GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAG...CCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCGTTGACTCTGGACAGTaGCCTAAAGTTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVVDSGQ*PKVEPV
Trigger: CACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATAGGCTTCCTCCTCGCTTaGTGGCAGACGCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIGFLLA*WQTQQT
Trigger: GGTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAAGCC...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396217.7
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTTGCAATCTCCACACTaGCGCTTGGTGTTGACGAGG +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGLQSPH*RLVLTR
Trigger: CCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSGPAGN*PHFACP
Trigger: TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACC...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSACCQVYIFFQGSQLLIGPAGN*PHFACP
Trigger: TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACC...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTCTGCAGGATTGTCGTaGCCAGTTCCTCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLSAGLS*PVPQLA
Trigger: AGCTAACTGAGGAACTGGCCACGACAATCCTGCAGA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGGATGTGGCCATCCTaGCTCTTCTTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGMWPS*LFFHLL
Trigger: CAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCCCGTCTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCATTGAGAAGGCAGACTaGGACCTCCAGAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRLLVKRTHGAMFNPAMVIEKAD*DLQRAA
Trigger: CGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAAT...GACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATACCTTGGCTGCCTCGATaGAGCCTCCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIPWLPR*SLHWRG
Trigger: ACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGG...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICPHSSS*AEQTLL
Trigger: GAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGG...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGCCACACTCTTCCAGCTaGGCAGAGCAGACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWPHSSS*AEQTLL
Trigger: GAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGG...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGGCTTCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: LLVKRTHGAMFNPAMVRASLLAN*GLKFTS
Trigger: GGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGA...AGCCCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTVSVRV*GSRASL
Trigger: CAATGAGGCTCGGGATCCCCAGACTCTCACAGACAC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCSQILS*AQTPDP
Trigger: AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATAGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIVRRDL*GLPGPC
Trigger: ACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVSSVPL*MQRAAS
Trigger: AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTSSVPL*MQRAAS
Trigger: AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWSSVPL*MQRAAS
Trigger: AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTGGAGTTCAGCATGGTaGACTTGGGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICWSSAW*TWAAAV
Trigger: CACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCTGGAGTTCAGCATGGTaGACTTGGGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLWSSAW*TWAAAV
Trigger: CACGGCTGCAGCCCAAGTCCACCATGCTGAACTCCA...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTTCAATATCTGAAATCTaGAGTTCAGCATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGSISEI*SSAWWT
Trigger: AGTCCACCATGCTGAACTCCAGATTTCAGATATTGA...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATTCAGCTTTCACCGGTaGAGCAGGCAGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSFSFHR*SRQFPP
Trigger: AGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTGCAGGGTTCCTGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: EVHVQLSMQAHLLSCRVPGSGIP*CQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCC...AGGAACCCTGCAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCTGTCAGTAAGCCCATaGAAGAACCCTAAATTCTTA +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGLSVSP*KNPKFL
Trigger: TAAGAATTTAGGGTTCTTCCATGGGCTTACTGACAG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTATAAAGGTGTGGCTTTaGCAAATTAATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIIKVWL*QINLSG
Trigger: GCCAGAGAGATTAATTTGCCAAAGCCACACCTTTAT...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCATTAGCATAAAGGTGTaGCTTTGGCAAATTAATCTC +
Preference number: 4 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGISIKV*LWQINL
Trigger: GAGATTAATTTGCCAAAGCCACACCTTTATGCTAAT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCCAAAGCGCTTaGAGCGGCTCTTCACATTAT +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRHCQSA*SGSSHY
Trigger: ATAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGCCTCCAGGGGATGCTaGGGTCCCCTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSASRGC*GPLICH
Trigger: GTGGCAGATGAGGGGACCTCAGCATCCCCTGGAGGC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATTCTTCTCCAGTGATTaGGAAGGCAGACTGGGACCT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSFFSSD*EGRLGP
Trigger: AGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGCCACCTCCAGGGCCTaGAACGTCCCGCTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCATSRA*NVPLLG
Trigger: ACCTAAGAGCGGGACGTTTCAGGCCCTGGAGGTGGC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTTTGCTTGGCTCTTCTaGGCCCAGTCGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICFAWLF*AQSGSS
Trigger: AGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTTTGCTTGGCTCTTCTaGGCCCAGTCGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTFAWLF*AQSGSS
Trigger: AGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCAAA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGACCCGAGCCTCATTGCTaGTGTCTGTCTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGPEPHC*CLSLIN
Trigger: ATTTATCAGAGACAGACATCAGCAATGAGGCTCGGG...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGCCCGAGCCTCATTGCTaGTGTCTGTCTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLPEPHC*CLSLIN
Trigger: ATTTATCAGAGACAGACATCAGCAATGAGGCTCGGG...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCCTCTGTGGTGTCTGTaGGAGTCTGGGGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVPLWCL*ESGDPE
Trigger: CTCGGGATCCCCAGACTCTCACAGACACCACAGAGG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTA +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTDPVFL*SAHMVL
Trigger: TAGCACCATGTGTGCGCTTCACAAGAAGACGGGATC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALSVHHS*LQSRLH
Trigger: ATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCAGTACATCACAGCTaGCTCCAGAGCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVSVHHS*LQSRLH
Trigger: ATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp AGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTCTTTGGACAAATTGTTaGCATGGAATACTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RSARWVSSVPLWMQRAASLWTNC*HGILAE
Trigger: TTCAGCTAGTATTCCATGTCAACAATTTGTCCAAAG...AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCTTTGGACAAATTGTTaGCATGGAATACTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGLWTNC*HGILAE
Trigger: TTCAGCTAGTATTCCATGTCAACAATTTGTCCAAAG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGTGGGCATGGCATGAGTaGGTCAGAACTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRWAWHE*VRTSHP
Trigger: AGGATGAGAAGTTCTGACTCACTCATGCCATGCCCA...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCCCTGGGCATGGCATaGGTGAGTCAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTALGMA*VSQNFS
Trigger: TGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCGCCCTGGGCATGGCATaGGTGAGTCAGAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVALGMA*VSQNFS
Trigger: TGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGC...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGCCCAATTAATTGAGTaGAAGTTCAGTTCCATTATC +
Preference number: 4 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGAQLIE*KFSSII
Trigger: GATAATGGAACTGAACTTTCACTCAATTAATTGGGC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATCCTCATCCAGCTTCTaGTTCAGCTCACTTAGTCGT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGSSSSF*FSSLSR
Trigger: ACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGGATGCTGCACTTGCTaGCTTCCTCATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALGCCTC*LPHPAS
Trigger: AGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCC...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGATGCTGCACTTGCTaGCTTCCTCATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGCCTC*LPHPAS
Trigger: AGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTAGAGGATGCTGCACTTaGTGCCTTCCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCRGCCT*CLPHPA
Trigger: AGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCT...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGAGGATGCTGCACTTaGTGCCTTCCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSPYTVPAARYTFSSREVRGCCT*CLPHPA
Trigger: AGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCT...GACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCCACAAACTGCTGGTaGTTCGAGAGGATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVSTNCW*FERMLH
Trigger: GTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ACACCTGATGTGTGTCTAGATCCCGGAGCTGGGCGCTGGGGGAAGATGGTTCTTAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TPDVCLDPGAGRWGKMVLNHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...AAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR GCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCGTCCCCATATGCCTCTaGTTTGGAAATTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVVPICL*FGNCFL
Trigger: GAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGAC...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVGQSRL*SRVLAL
Trigger: CAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVTWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCTCGGGAAGAGCCTaGGGAGGAGGTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVFSGRA*GGGLRV
Trigger: GACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAA...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGKMVL*LALLSP
Trigger: TGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLQSIHSACCQVYIFFQGGKMVL*LALLSP
Trigger: TGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCC...TCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSGKMVL*LALLSP
Trigger: TGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCC...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGGCTGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLVKRTHGAMFNPAMVRAGPCRS*YQLLCG
Trigger: GCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCC...AGCCCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCTCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTSREVS*SSSLTW
Trigger: CCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGA...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GTGCTATGTTTAATCCTGCAATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGCAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: VLCLILQWSGLKSGSQYLQCHCG*SGRHLL
Trigger: TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTG...CAGATATTGAGAGCCGGATTTCAGCCCTGACCATTGCAGGATTAAACATAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGCTCACTGCAGGGACTTaGTTTTCCCTTAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLLTAGT*FSLRIC
Trigger: GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAG...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGACCTGTGGCTTGTGATTaGAAAGCGATGGGAATGACT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGPVACD*KAMGMT
Trigger: AGTCATTCCCATCGCTTTGCAATCACAAGCCACAGG...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGTTGACTCTGGACAGTaGCCTAAAGTTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRVDSGQ*PKVEPV
Trigger: CACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGCTCCACAAACTGCTaGTGCTTCGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVCSTNC*CFERML
Trigger: CAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGAACCATTCCAGAGATTaGGCCCTCAGAAGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVNHSRD*ALRSLA
Trigger: AGCGAGGCTTCTGAGGGCCCAATCTCTGGAATGGTT...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGPAGN*PHFACP
Trigger: TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGGTCCCGCAGGTAACTaGCCTCATTTTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCGPAGN*PHFACP
Trigger: TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCTGCAGGATTGTCGTaGCCAGTTCCTCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGSAGLS*PVPQLA
Trigger: AGCTAACTGAGGAACTGGCCACGACAATCCTGCAGA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGGGATGTGGCCATCCTaGCTCTTCTTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICGMWPS*LFFHLL
Trigger: CAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATACTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIILGCWP*SLGCLD
Trigger: ATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAG...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTCTGCTCTCGGGTGTTaGCCTTGGTCCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVSALGC*PWSLGC
Trigger: GCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGA...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGGGGCTCTGCAAAACTaGGGCCAGGTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTGALQN*GQVCFI
Trigger: GATGAAACAAACCTGGCCCCAGTTTTGCAGAGCCCC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCGGGGCTCTGCAAAACTaGGGCCAGGTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SSPYTVPAARYTFSSREVGALQN*GQVCFI
Trigger: GATGAAACAAACCTGGCCCCAGTTTTGCAGAGCCCC...GACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGGGGCTCTGCAAAACTaGGGCCAGGTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCGALQN*GQVCFI
Trigger: GATGAAACAAACCTGGCCCCAGTTTTGCAGAGCCCC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGCAGCTATGGGGCCTTaGTCAGAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVAAMGP*SELWAC
Trigger: ACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGTGTCTGTGAGAGTCTaGGGATCCCGAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICVSVRV*GSRASL
Trigger: CAATGAGGCTCGGGATCCCCAGACTCTCACAGACAC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGATCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACA +
Preference number: 4 (lower is better)
Translates to: GLQSIHSACCQVYIFFQGSSSVS*VSSPYT
Trigger: TGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGA...TCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGCAGCCGTGGCCACCTaGTCCTCCAGATCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIAAVAT*SSRSAR
Trigger: TCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTATCTGGAGTTCAGCATaGTGGACTTGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTIWSSA*WTWAAA
Trigger: GGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGAT...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTGTTTAATCCTGCAATaGTCAGGGCTGAAATCCGGC +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLCLILQ*SGLKSG
Trigger: GCCGGATTTCAGCCCTGACCATTGCAGGATTAAACA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGTGGGTCACTGGCAGTaGAATTCCATGGTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGVGHWQ*NSMVSV
Trigger: TACTGACACCATGGAATTCCACTGCCAGTGACCCAC...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTGAGGCAGTGGGTCACTaGCAGTGGAATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLEAVGH*QWNSMV
Trigger: CACCATGGAATTCCACTGCCAGTGACCCACTGCCTC...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTGGGCTGCAGCCGGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 4 (lower is better)
Translates to: GSQYLKSGVQHGGLGLQPGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...CGGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
3UTR CAA 72 bp TCACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTACCTGGGTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SPVEQAVSSFAA*MYLWFVPGSFA
Trigger: AGCAAAGGACCCAGGTACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTTCTTCTCCAGTGATTaGGAAGGCAGACTGGGACCT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTFFSSD*EGRLGP
Trigger: AGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAAAATCATCCGACACCTaGTGTGTGTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAKSSDT*CVSRSR
Trigger: CCGGGATCTAGACACACATCAGGTGTCGGATGATTT...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCACCCGAGCCTCATTGCTaGTGTCTGTCTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSPEPHC*CLSLIN
Trigger: ATTTATCAGAGACAGACATCAGCAATGAGGCTCGGG...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTA +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTDPVFL*SAHMVL
Trigger: TAGCACCATGTGTGCGCTTCACAAGAAGACGGGATC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGAGACCTGCAGTCTTaGTGGTTGAGCAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTGDLQS*WLSNPQ
Trigger: TTGGGGATTGCTCAACCATCAAGACTGCAGGTCTCC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGGATGCTGCACTTGCTaGCTTCCTCATCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICGCCTC*LPHPAS
Trigger: AGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGCAGGCTGTCCCCATATaGCTCTGCTTTGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVQAVPI*LCFGNC
Trigger: GCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTG...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCCATCTGCCACCTTTGTaGTGCAACTCTGGGGATGTG +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLHLPPL*CNSGDV
Trigger: CACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATG...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCTCATCGTAGGCAGATaGCACACTGGAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVLIVGR*HTGGHL
Trigger: GAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVDSLAW*PTSREE
Trigger: CTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTCCAGGGAAGTCAGCTaGTCATCCAGTCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICSREVS*SSSLTW
Trigger: CCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTATACACAGTGCCTGCTaGCAGGTATACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCIHSAC*QVYIFF
Trigger: GAAGAAAATGTATACCTGGCAGCAGGCACTGTGTAT...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACCAGTCCATACACAGTaGCTGCTGCCAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAPVHTQ*LLPGIH
Trigger: ATGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGCCAGTCCATACACAGTaGCTGCTGCCAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTPVHTQ*LLPGIH
Trigger: ATGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATAGATGGGTCTCATCAGTaGCACTGTGGATGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIDGSHQ*HCGCSG
Trigger: CCCGCTGCATCCACAGTGGCACTGATGAGACCCATC...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTATGGTGGACTTGGGCTaGAGCCGTGGCCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIMVDLG*SRGHLV
Trigger: GACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCAT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATG +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGGSFLL*CLDVSM
Trigger: CATAGATACATCAAGGCAGCAAAGGAGGAAACTGCC...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCTCACTGCAGGGACTTaGTTTTCCCTTAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGLTAGT*FSLRIC
Trigger: GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAG...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGTTGACTCTGGACAGTaGCCTAAAGTTGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALVDSGQ*PKVEPV
Trigger: CACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTGCTCCACAAACTGCTaGTGCTTCGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTCSTNC*CFERML
Trigger: CAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CGTCTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGAACCATTCCAGAGATTaGGCCCTCAGAAGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RLLVKRTHGAMFNPAMVRNHSRD*ALRSLA
Trigger: AGCGAGGCTTCTGAGGGCCCAATCTCTGGAATGGTT...CCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTTGGCCAGTAGTCGGGTaGGGGGTGGAGCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIWPVVG*GVERHP
Trigger: AGGATGGCGCTCCACCCCCCACCCGACTACTGGCCA...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATATCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIISLLAN*GLKFTS
Trigger: GGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGA...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGSQILS*AQTPDP
Trigger: AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCSSWTL*LLSSED
Trigger: GTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVSSWTL*LLSSED
Trigger: GTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCSSSLT*SVPRGN
Trigger: GTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTCATCCAGTCTCACTTaGTCTGTCCCACGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTSSSLT*SVPRGN
Trigger: GTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCATCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACA +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKASSSVS*VSSPYT
Trigger: TGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGA...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSSAWWT*AAAVAT
Trigger: GGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTCAGCATGGTGGACTTaGGCTGCAGCCGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFISAWWT*AAAVAT
Trigger: GGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCCCGTCTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCTTCAGCTTTCACCGGTaGAGCAGGCAGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRLLVKRTHGAMFNPAMVFSFHR*SRQFPP
Trigger: AGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAA...GACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp TTTCGTATAATCTTCTGCAGGATTGTCGTGGCCAGTTCCTCAGTTAGCTCCTCCTTCAGCTTTCACCGGTaGAGCAGGCAGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FRIIFCRIVVASSSVSSSFSFHR*SRQFPP
Trigger: AGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAA...GGAGGAGCTAACTGAGGAACTGGCCACGACAATCCTGCAGAAGATTATACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTACGGCCGGAGGCAGTaGGTCACTGGCAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVYGRRQ*VTGSGI
Trigger: AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTA...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGTACTCGATGGCTGTTaGGTCAAGGCACTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICVLDGC*VKALSC
Trigger: ACACGACAGTGCCTTGACCCAACAGCCATCGAGTAC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTCTGAGACGGCTTTCTaGATGAGGTATCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTSETAF*MRYQDS
Trigger: GCTGTCCTGATACCTCATCCAGAAAGCCGTCTCAGA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTGTCTTGGATTCCCCTaGGAGCCTAAGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTCLGFP*EPKAES
Trigger: ACTCTCTGCCTTAGGCTCCCAGGGGAATCCAAGACA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTTCCCCTTCAGATCTaGGCAACTGTCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALFPLQI*ATVSKP
Trigger: GGGCTTACTGACAGTTGCCCAGATCTGAAGGGGAAA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTGTCATACATTTGATATaGGTTCAAAGAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIVIHLI*VQRNHR
Trigger: TCTGTGGTTTCTTTGAACCCATATCAAATGTATGAC...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCAACCATTCCAGAGATTaGGCCCTCAGAAGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTNHSRD*ALRSRN
Trigger: GTTACGGCTTCTGAGGGCCCAATCTCTGGAATGGTT...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539167.2
3UTR CAA 72 bp GGCCCTGTAGATCCTGCTATCAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCTGTGGAGATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GPVDPAINSSVA*MTFRTSVEMLQ
Trigger: CTGCAACATCTCCACAGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGAGCTCTTGCAGACATTaGATTTGCAATCTCCACACT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLSSCRH*ICNLHT
Trigger: AGTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCT...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGCTCTTGCAGACATTaGATTTGCAATCTCCACACT +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVSSCRH*ICNLHT
Trigger: AGTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCCACTGCCAAAGCGCTTaGAGCGGCTCTTCACATTAT +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICHCQSA*SGSSHY
Trigger: ATAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTG...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000458292.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTTCATTCTCCAGGTTTaGCTCAAAAAGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGFILQV*LKKASS
Trigger: GGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATTCATTCTCCAGGTTTaGCTCAAAAAGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSFILQV*LKKASS
Trigger: GGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGAAATCATCCGACACCTaGTGTGTGTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWKSSDT*CVSRSR
Trigger: CCGGGATCTAGACACACATCAGGTGTCGGATGATTT...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCCCCGAGCCTCATTGCTaGTGTCTGTCTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTPEPHC*CLSLIN
Trigger: ATTTATCAGAGACAGACATCAGCAATGAGGCTCGGG...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCGCAGTGCTGAAGTCTaGGACGGCTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVRSAEV*DGFLDE
Trigger: CTCATCCAGAAAGCCGTCTCAGACTTCAGCACTGCG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCGTCCCCATATGCCTCTaGTTTGGAAATTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTVPICL*FGNCFL
Trigger: GAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGAC...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTCAGGCTGTCCCCATATaGCTCTGCTTTGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTQAVPI*LCFGNC
Trigger: GCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTG...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTTTCGTATAATCTTCTaGAGGATTGTCGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLFRIIF*RIVVAS
Trigger: ACTGGCCACGACAATCCTGCAGAAGATTATACGAAA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATCTTCTTCCACTTGCTaGTCACTTTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGSSSTC*SLLLFC
Trigger: ACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCCTTGGTCCCTTGGCTaGCTCGATGGAGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIPWSLG*LDGAST
Trigger: AGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGGGCAGAGCAGACTCTaGTCTCGGGTGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIGQSRL*SRVLAL
Trigger: CAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGCGCATCTTCTCAGCTaGAGGGTTCCTGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIAHLLS*RVPGGL
Trigger: AAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTGKMVL*LALLSP
Trigger: TGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCGGGAAGATGGTTCTTTaGTTGGCTCTTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIGKMVL*LALLSP
Trigger: TGGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCC...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATCCATACACAGTGCCTaGTGCCAGGTATACATTTTC +
Preference number: 4 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSSIHSA*CQVYIF
Trigger: GAAAATGTATACCTGGCAGCAGGCACTGTGTATGGA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCCCAGTCCATACACAGTaGCTGCTGCCAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVPVHTQ*LLPGIH
Trigger: ATGTATACCTGGCAGCAGGCACTGTGTATGGACTGG...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCAGTGCCACTGTGGATaGAGCGGGCGGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCQCHCG*SGRHLL
Trigger: TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATG +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGSFLL*CLDVSM
Trigger: CATAGATACATCAAGGCAGCAAAGGAGGAAACTGCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTAGCCCTGTGCAATGGTaGACTGTGGCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSISPVQW*TVASPG
Trigger: GCCTGGGGAGGCCACAGTGCACCATTGCACAGGGCT...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCCTGTGGCTTGTGATTaGAAAGCGATGGGAATGACT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCPVACD*KAMGMT
Trigger: AGTCATTCCCATCGCTTTGCAATCACAAGCCACAGG...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGATACACAGTGCCTGCTaGCAGGTATACCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALIHSAC*QVYLLQ
Trigger: CTGAAGAAGGTATACCTGGCAGCAGGCACTGTGTAT...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS-3UTR CCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTCTGCAGGATTGTCGTaGCCAGTTCCTCAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTSAGLS*PVPQLA
Trigger: AGCTAACTGAGGAACTGGCCACGACAATCCTGCAGA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSLGCWP*SLGCLD
Trigger: ATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAG...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGCAGCTATGGGGCCTTaGTCAGAGCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIAAMGP*SELWAC
Trigger: ACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTATGGGGAGGCAGCTATaGGGCCTTGGTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCMGRQL*GLGQSS
Trigger: AGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCAT...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGGAGAGTGCAGAGGATaGGGAGGCAGCTATGGGGCC +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIGECRG*GGSYGA
Trigger: GGCCCCATAGCTGCCTCCCCATCCTCTGCACTCTCC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCSLLAN*GLKFTS
Trigger: GGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVFFSSS*TLWLLS
Trigger: AGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCFFSSS*TLWLLS
Trigger: AGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGTCAGGAGGGACTTGTaGGGACTCCCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIVRRDL*GLPGPC
Trigger: ACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTCATCAGTGCCACTGTaGATGCAGCGGGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCSSVPL*MQRAAS
Trigger: AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCTGTTTAATCCTGCAATaGTCAGGGCTGAAATCCGGC +
Preference number: 4 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTCLILQ*SGLKSG
Trigger: GCCGGATTTCAGCCCTGACCATTGCAGGATTAAACA...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGSGIP*CQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCGSGIP*CQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTGTGGGTCACTGGCAGTaGAATTCCATGGTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLVGHWQ*NSMVSV
Trigger: TACTGACACCATGGAATTCCACTGCCAGTGACCCAC...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCGTGGGTCACTGGCAGTaGAATTCCATGGTGTCAGTA +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIVGHWQ*NSMVSV
Trigger: TACTGACACCATGGAATTCCACTGCCAGTGACCCAC...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGACAGCCCTGTGCAATaGTGCACTGTGGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSDSPVQ*CTVASP
Trigger: TGGGGAGGCCACAGTGCACCATTGCACAGGGCTGTC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTTCATTCTCCAGGTTTaGCTCAAAAAGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTFILQV*LKKASS
Trigger: GGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTGGCCAACTGGGGGTTaGAGTTCACGTCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIWPTGG*SSRPAL
Trigger: GAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGATCCCGTCTTCTTGTaGAGCGCACACATGGTGCTA +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVDPVFL*SAHMVL
Trigger: TAGCACCATGTGTGCGCTTCACAAGAAGACGGGATC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCCTCCTTTGCTGCCTTaGTGTATCTATGGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALPPLLP*CIYGLY
Trigger: GTACAAACCATAGATACATCAAGGCAGCAAAGGAGG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTCAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTTAGCTCACGTGTCTTaGGAAATAATTAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLLAHVS*EIIKRQ
Trigger: CTGGCGTTTAATTATTTCTCAAGACACGTGAGCTAA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCAGAGGATGCTGCACTTaGTGCCTTCCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVRGCCT*CLPHPA
Trigger: AGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCT...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATATCCACAAACTGCTGGTaGTTCGAGAGGATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIISTNCW*FERMLH
Trigger: GTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGA...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATACAGTGCTCCACAAACTaGTGGTGCTTCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIQCSTN*WCFERM
Trigger: CATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTG...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR GCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGCGAGCAGCAGCGCATaGAGCAGTGCTCCACAAACT +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSASSSA*SSAPQT
Trigger: AGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCTCTGCTTTGGAAATTaGTTCCTCAATGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCLCFGN*FLNGLF
Trigger: GAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAG...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCTWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGACAGTCTGGCCTGGTaGCCAACTTCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSDSLAW*PTSREE
Trigger: CTCTTCCCGAGAAGTTGGGCACCAGGCCAGACTGTC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCCATACACAGTGCCTaGTGCCAGGTATACATTTTC +
Preference number: 4 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALSIHSA*CQVYIF
Trigger: GAAAATGTATACCTGGCAGCAGGCACTGTGTATGGA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTAGAAGCCTCGCTTGCTaGCAGACGCAGCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIRSLAC*QTQQTQ
Trigger: CTGGGTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCT...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302541.11
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTCTCGGGTGTTGGCCTTaGTCCCTTGGCTGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSILGCWP*SLGCLD
Trigger: ATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAG...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCAGGACAGTCTGGCCTaGTGCCCAACTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIQDSLA*CPTSRE
Trigger: TTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTCCCTGCTGGCCAACTaGGGGTTGAAGTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFISLLAN*GLKFTS
Trigger: GGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTCTCAGATTCTGTCTTaGGCTCAGACTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVSQILS*AQTPDP
Trigger: AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGA...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GTGCTATGTTTAATCCTGCAATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VLCLILQWSGLKSGSQYLSSWTL*LLSSED
Trigger: GTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGA...CAGATATTGAGAGCCGGATTTCAGCCCTGACCATTGCAGGATTAAACATAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTCAATATCTGAAATCTaGAGTTCAGCATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVSISEI*SSAWWT
Trigger: AGTCCACCATGCTGAACTCCAGATTTCAGATATTGA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTTCGTATAATCTTCTGCAGGATTGTCGTGGCCAGTTCCTCAGTTAGCTCCTCCACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: FRIIFCRIVVASSSVSSSTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...GGAGGAGCTAACTGAGGAACTGGCCACGACAATCCTGCAGAAGATTATACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCACATACAGTACTCGATaGCTGTTGGGTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICTYSTR*LLGQGT
Trigger: AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGT...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCGGCCTTCTCCTCAGGTaGAAATACATACAGTACTCG +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVGLLLR*KYIQYS
Trigger: CGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGAGCTCTTGCAGACATTaGATTTGCAATCTCCACACT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVSSCRH*ICNLHT
Trigger: AGTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCT...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGGGCTTCTTCTCCAGTaGTTGAGAAGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSGLLLQ*LRRQTG
Trigger: CCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGCCC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GTGCTATGTTTAATCCTGCAATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGCCCGAGCCTCATTGCTaGTGTCTGTCTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: VLCLILQWSGLKSGSQYLPEPHC*CLSLIN
Trigger: ATTTATCAGAGACAGACATCAGCAATGAGGCTCGGG...CAGATATTGAGAGCCGGATTTCAGCCCTGACCATTGCAGGATTAAACATAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTAGACGGCTTTCTGGATaGGGTATCAGGACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIRRLSG*GIRTAL
Trigger: CAGGGCTGTCCTGATACCTCATCCAGAAAGCCGTCT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGCAAGACCGCAGTGCTaGAGTCTGAGACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIARPQC*SLRRLS
Trigger: AGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTCAGGAAGGAGGTGGCTaGAGGGAGACCTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIQEGGG*RETCSL
Trigger: AAGACTGCAGGTCTCCCTTCAGCCACCTCCTTCCTG...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTAGAGGATGCTGCACTTaGTGCCTTCCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCRGCCT*CLPHPA
Trigger: AGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCT...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCASRGC*TCCLPH
Trigger: ATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCNHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCCTCTGCTTTGGAAATTaGTTCCTCAATGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLILCFGN*FLNGLF
Trigger: GAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAG...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCAGGCTGTCCCCATATaGCTCTGCTTTGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVQAVPI*LCFGNC
Trigger: GCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTTTCGTATAATCTTCTaGAGGATTGTCGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTFRIIF*RIVVAS
Trigger: ACTGGCCACGACAATCCTGCAGAAGATTATACGAAA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCTTTCGTATAATCTTCTaGAGGATTGTCGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSPYTVPAARYTFSSREVFRIIF*RIVVAS
Trigger: ACTGGCCACGACAATCCTGCAGAAGATTATACGAAA...GACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCTTCTTCCACTTGCTaGTCACTTTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVSSSTC*SLLLFC
Trigger: ACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTACCTGGGACACAGCTTaGTCAAGGCCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFITWDTA*SRPHSS
Trigger: ACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAATACACAGTGCCTGCTaGCAGGTATACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAIHSAC*QVYIFF
Trigger: GAAGAAAATGTATACCTGGCAGCAGGCACTGTGTAT...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCTCCATACACAGTGCCTaGTGCCAGGTATACATTTTC +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLSIHSA*CQVYIF
Trigger: GAAAATGTATACCTGGCAGCAGGCACTGTGTATGGA...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTT +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGSFLLC*LDVSMV
Trigger: AACCATAGATACATCAAGGCAGCAAAGGAGGAAACT...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTT +
Preference number: 4 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSSFLLC*LDVSMV
Trigger: AACCATAGATACATCAAGGCAGCAAAGGAGGAAACT...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTTTTCCCTTAGGATTTaGAAGACAAAGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLFSLRI*KTKMLV
Trigger: CACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTGCTCCACAAACTGCTaGTGCTTCGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCCSTNC*CFERML
Trigger: CAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGGGGCTCTGCAAAACTaGGGCCAGGTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCGALQN*GQVCFI
Trigger: GATGAAACAAACCTGGCCCCAGTTTTGCAGAGCCCC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTCAGGACAGTCTGGCCTaGTGCCCAACTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIQDSLA*CPTSRE
Trigger: TTCCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTG...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGGCGCTGGGGGAAGATaGTTCTTTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSGAGGR*FFAWLF
Trigger: GAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATATCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACA +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIISSSVS*VSSPYT
Trigger: TGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGA...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCTGTCAGTAAGCCCATaGAAGAACCCTAAATTCTTA +
Preference number: 4 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGLSVSP*KNPKFL
Trigger: TAAGAATTTAGGGTTCTTCCATGGGCTTACTGACAG...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGATCAGCAAGGAGTACTaGAAGATTAATGTAGACCCC +
Preference number: 4 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVISKEY*KINVDP
Trigger: GGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCCTCAGAAGCCGTAACTaGTGGTTTTCTTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLLRSRN*WFSFCQ
Trigger: TTGGCAGAAAGAAAACCACCAGTTACGGCTTCTGAG...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539167.2
CDS-3UTR TCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTAAATCATCCGACACCTaGTGTGTGTCTAGATCCCGG +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCKSSDT*CVSRSR
Trigger: CCGGGATCTAGACACACATCAGGTGTCGGATGATTT...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTAGAGGATGCTGCACTTaGTGCCTTCCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSRGCCT*CLPHPA
Trigger: AGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCT...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTCCACAAACTGCTGGTaGTTCGAGAGGATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFISTNCW*FERMLH
Trigger: GTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTCAGTGCTCCACAAACTaGTGGTGCTTCGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSQCSTN*WCFERM
Trigger: CATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTG...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVNHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp CAGCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCTAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: QLTPEQAPSNPWWCLSFPKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...AGGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCTTTCGTATAATCTTCTaGAGGATTGTCGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIFRIIF*RIVVAS
Trigger: ACTGGCCACGACAATCCTGCAGAAGATTATACGAAA...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTTTCGTATAATCTTCTaGAGGATTGTCGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWFRIIF*RIVVAS
Trigger: ACTGGCCACGACAATCCTGCAGAAGATTATACGAAA...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR GCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTCTTCTTCCACTTGCTaGTCACTTTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICSSSTC*SLLLFC
Trigger: ACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTACGTCCAGCTCTCCATaGAAGCGCATCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFITSSSP*KRIFSA
Trigger: AGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTT +
Preference number: 4 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTSFLLC*LDVSMV
Trigger: AACCATAGATACATCAAGGCAGCAAAGGAGGAAACT...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATATTAAACATGGAGCGCTaGTGTTGGAAGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIILNMER*CWKPVS
Trigger: AGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAA...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATACCTGTGGCTTGTGATTaGAAAGCGATGGGAATGACT +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIPVACD*KAMGMT
Trigger: AGTCATTCCCATCGCTTTGCAATCACAAGCCACAGG...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTTTCAGCTTTCACCGGTaGAGCAGGCAGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSFSFHR*SRQFPP
Trigger: AGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAA...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCATCAGCAAGGAGTACTaGAAGATTAATGTAGACCCC +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICISKEY*KINVDP
Trigger: GGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCACTCCATGTCCTCATaGCCAGAAAAGCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIHSMSS*PEKPRQ
Trigger: CTGTCTGGGCTTTTCTGGCCATGAGGACATGGAGTG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539167.2
3UTR CAA 72 bp GGCCATCCTGGCTCTTCTTCCACTTGCTGCTCACTTTaGCTCTTCTGTTTTCGTATAATCTTCTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: GHPGSSSTCCSL*LFCFRIIFCRI
Trigger: AATCCTGCAGAAGATTATACGAAAACAGAAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCAGGATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR TCA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCTTTGGACAAATTGTTaGCATGGAATACTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCLWTNC*HGILAE
Trigger: TTCAGCTAGTATTCCATGTCAACAATTTGTCCAAAG...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTACGTCCAGCTCTCCATaGAAGCGCATCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSITSSSP*KRIFSA
Trigger: AGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGT...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTAAATTGCTTCCTCAATaGCCTCTTCAGCCACCCGTA +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCKLLPQ*PLQPPV
Trigger: TACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTT...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFISSWTL*LLSSED
Trigger: GTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTCAATATCTGAAATCTaGAGTTCAGCATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTSISEI*SSAWWT
Trigger: AGTCCACCATGCTGAACTCCAGATTTCAGATATTGA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTCAATATCTGAAATCTaGAGTTCAGCATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: MVRAEIRLSISEIWSSAWSISEI*SSAWWT
Trigger: AGTCCACCATGCTGAACTCCAGATTTCAGATATTGA...CCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTGTTTAATCCTGCAATaGTCAGGGCTGAAATCCGGC +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCCLILQ*SGLKSG
Trigger: GCCGGATTTCAGCCCTGACCATTGCAGGATTAAACA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGGCAGTGGAATTCCATaGTGTCAGTACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: MYLKHGALLLEASVFIFCGSGIP*CQYITA
Trigger: AGCTGTGATGTACTGACACCATGGAATTCCACTGCC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCCTGTCAGTAAGCCCATaGAAGAACCCTAAATTCTTA +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLLSVSP*KNPKFL
Trigger: TAAGAATTTAGGGTTCTTCCATGGGCTTACTGACAG...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCAGCTCTTGCAGACATTaGATTTGCAATCTCCACACT +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVSSCRH*ICNLHT
Trigger: AGTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCT...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR TCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTCACTGCCAAAGCGCTTaGAGCGGCTCTTCACATTAT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIHCQSA*SGSSHY
Trigger: ATAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTG...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000539167.2
CDS-3UTR TCA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGCCCAATTAATTGAGTaGAAGTTCAGTTCCATTATC +
Preference number: 4 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICAQLIE*KFSSII
Trigger: GATAATGGAACTGAACTTTCACTCAATTAATTGGGC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIFFSSS*TLWLLS
Trigger: AGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGACCCCCATCAGGAGTaGATCATAGCACACAAGTTA +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIDPHQE*IIAHKL
Trigger: TAACTTGTGTGCTATGATCCACTCCTGATGGGGGTC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVKMLNH*QKCFLH
Trigger: ATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTT...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCTCTGCTTTGGAAATTaGTTCCTCAATGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFILCFGN*FLNGLF
Trigger: GAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCAGTTTCCTCCTTTGCTaGCTTGATGTATCTATGGTT +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVSFLLC*LDVSMV
Trigger: AACCATAGATACATCAAGGCAGCAAAGGAGGAAACT...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGGCAGTTTCCTCCTTTaGTGCCTTGATGTATCTATG +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIGSFLL*CLDVSM
Trigger: CATAGATACATCAAGGCAGCAAAGGAGGAAACTGCC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIFFSSS*TLWLLS
Trigger: AGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAA...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTCAATATCTGAAATCTaGAGTTCAGCATGGTGGACT +
Preference number: 4 (lower is better)
Translates to: NRENMYLKHGALLLEASVSISEI*SSAWWT
Trigger: AGTCCACCATGCTGAACTCCAGATTTCAGATATTGA...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CCA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCATACATTTGATATaGGTTCAAAGAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTVIHLI*VQRNHR
Trigger: TCTGTGGTTTCTTTGAACCCATATCAAATGTATGAC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp ATCAGCAAGGAGTACTGGAAGATTAATGTAGACCCCCATCAGGAGTGGATCATAATAAAGGTGTGGCTTTaGCAAATTAATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ISKEYWKINVDPHQEWIIIKVWL*QINLSG
Trigger: GCCAGAGAGATTAATTTGCCAAAGCCACACCTTTAT...TATGATCCACTCCTGATGGGGGTCTACATTAATCTTCCAGTACTCCTTGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCATTAGCATAAAGGTGTaGCTTTGGCAAATTAATCTC +
Preference number: 4 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLISIKV*LWQINL
Trigger: GAGATTAATTTGCCAAAGCCACACCTTTATGCTAAT...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCATTAGCATAAAGGTGTaGCTTTGGCAAATTAATCTC +
Preference number: 4 (lower is better)
Translates to: DIVSDSPGHGMSESELLIISIKV*LWQINL
Trigger: GAGATTAATTTGCCAAAGCCACACCTTTATGCTAAT...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGACCCCCATCAGGAGTaGATCATAGCACACAAGTTA +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIDPHQE*IIAHKL
Trigger: TAACTTGTGTGCTATGATCCACTCCTGATGGGGGTC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR GCA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ICILNMERCCWKPVSSFSNHCQK*FLHSPG
Trigger: ACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTATACACAGTGCCTGCTaGCAGGTATACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIIHSAC*QVYIFF
Trigger: GAAGAAAATGTATACCTGGCAGCAGGCACTGTGTAT...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR TCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCTTTGGACAAATTGTTaGCATGGAATACTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFILWTNC*HGILAE
Trigger: TTCAGCTAGTATTCCATGTCAACAATTTGTCCAAAG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR GCA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTTTCCCTTAGGATTTaGAAGACAAAGATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ENMYLKHGALLLEASVFIFSLRI*KTKMLV
Trigger: CACAAGCATCTTTGTCTTGCAAATCCTAAGGGAAAA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR TCA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGCCCAATTAATTGAGTaGAAGTTCAGTTCCATTATC +
Preference number: 4 (lower is better)
Translates to: YGFKETTDMELESILVSIAQLIE*KFSSII
Trigger: GATAATGGAACTGAACTTTCACTCAATTAATTGGGC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS GCA 90 bp GCGGCGAAGAAGGGGCGCGGGTCGGTCTGCGCGCTAAAGCTGGGCTaGAGCACCGCGGGGGCTCGGCTGCCAGAACCGCAGCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AAKKGRGSVCALKLG*STAGARLPEPQPQR
Trigger: CCGCTGCGGCTGCGGTTCTGGCAGCCGAGCCCCCGCGGTGCTGCAGCCCAGCTTTAGCGCGCAGACCGACCCGCGCCCCTTCTTCGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS GCA 90 bp GGCGGCCGGGCTCAGGCCACCGCGCCTCAGTACGCCCAGGGCACCTaGCGCAACGCGCCGCGTGGATTAGAGGCTGCCGGCGGCGAAGAA +
Preference number: 5 (lower is better)
Translates to: GGRAQATAPQYAQGT*RNAPRGLEAAGGEE
Trigger: TTCTTCGCCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGGCAGGTGCCCTGGGCGTACTGAGGCGCGGTGGCCTGAGCCCGGCCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS CCA 90 bp CACCGCGCCTCAGTACGCCCAGGGCACCTGCCGCAACGCGCCGCGTaGATTAGAGGCTGCCGGCGGCGAAGAAGGGGCGCGGGTCGGTCT +
Preference number: 5 (lower is better)
Translates to: HRASVRPGHLPQRAA*IRGCRRRRRGAGRS
Trigger: AGACCGACCCGCGCCCCTTCTTCGCCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGGCAGGTGCCCTGGGCGTACTGAGGCGCGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS-3UTR CAA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPSRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCTCCACACTGGCGCTaGGTGTTGACGAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: WTWAAAVATWSSRSARWVSPHWR*VLTRKV
Trigger: CACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGA...GACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSSRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGTCCCGCTCTTAGGTTaGGCCAGTAGTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVVPLLG*ASSRVG
Trigger: CCCCACCCGACTACTGGCCAAACCTAAGAGCGGGAC...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGCAGCTATGGGGCCTaGGTCAGAGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSGSYGA*VRALGL
Trigger: CAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCC...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTTCAGCATGGTGGACTaGGGCTGCAGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSFSMVD*GCSRGH
Trigger: GTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCACTGGCGCTTGGTGTaGACGAGGAAGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVHWRLV*TRKVKG
Trigger: GCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTCCTCAGAAGCCTCGCTaGCTGGCAGACGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAPQKPR*LADAAD
Trigger: GTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCTGAGG...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAVGLGP*AASMEP
Trigger: AGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETASRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGILCSRV*ALVPWL
Trigger: CAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGCTTGGCTCTTCTGAGCCCAGTCGGGCTCTTCTCCACCTCCTGGCCCGCCGGTGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: CLALLSPVGLFSTSWPAGGEDGS*LGSSEP
Trigger: GGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCC...ACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp CCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCAGGCTTCCTCCTCGCTaGCTGGCAGACGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: PGPPDPPDGSHQCHCGCSRLPPR*LADAAD
Trigger: GTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAAGCCT...GCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp GTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCCTCAGAAGCCTCGCTaGCTGGCAGACGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: VRRDLWGLPGPCRSCYQLPQKPR*LADAAD
Trigger: GTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCTGAGG...GAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR CAA 90 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACGTCCCGCTCTTAGGTTaGGCCAGTAGTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: WMQRAASSSSVSWVSSPYVPLLG*ASSRVG
Trigger: CCCCACCCGACTACTGGCCAAACCTAAGAGCGGGAC...GTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGACCTGGGACACAGCTaGCTCAAGGCCTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETADLGHS*LKASLQ
Trigger: CTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTGGCCAACTGGGGGTaGAAGTTCACGTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWLANWG*KFTSSS
Trigger: AGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGGEDGS*LGSSEP
Trigger: GGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCC...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 5 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGGCAGAGCAGACTCTGCTCTCGGGTGTTGGCCTTGGTCCCTTGGCTGCCTCGAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 5 (lower is better)
Translates to: WAEQTLLSGVGLGPLAASSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...CGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAGTCTGCTCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS CCA 90 bp GTGAAGGGCGAGCAGCAGCGCATGCAGCAGTGCTCCACAAACTGCTaGTGCTTCGAGAGGATGCTGCACTTGCTGCCTTCCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: VKGEQQRMQQCSTNC*CFERMLHLLPSSSS
Trigger: GCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGCCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGAACCATTCCAGAGATaGGGCCCTCAGAAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAEPFQR*GPQKPR
Trigger: GCGAGGCTTCTGAGGGCCCAATCTCTGGAATGGTTC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGAACCATTCCAGAGATaGGGCCCTCAGAAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGEPFQR*GPQKPR
Trigger: GCGAGGCTTCTGAGGGCCCAATCTCTGGAATGGTTC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTCTGGCCAACTGGGGGTaGAAGTTCACGTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETALANWG*KFTSSS
Trigger: AGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAG...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCTGGCCAACTGGGGGTaGAAGTTCACGTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGLANWG*KFTSSS
Trigger: AGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCGGCTCCATCAAATCCTaGGTGGTGCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGGSIKS*VVPFLS
Trigger: GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCC...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS TCA 90 bp GGAGCAAGTGCTCCAAAAAGCCGCAGGTCTTGGGGTTCCCACCACTaGATCTTTCCGCTCCACGCGTCCATCAGGAAGATCCTCCGCCGT +
Preference number: 5 (lower is better)
Translates to: GASAPKSRRSWGSHH*IFPLHASIRKILRR
Trigger: ACGGCGGAGGATCTTCCTGATGGACGCGTGGAGCGGAAAGATTCAGTGGTGGGAACCCCAAGACCTGCGGCTTTTTGGAGCACTTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS GCA 90 bp AAGGGCGAGCAGCAGCGCATGCAGCAGTGCTCCACAAACTGCTGGTaGTTCGAGAGGATGCTGCACTTGCTGCCTTCCTCATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KGEQQRMQQCSTNCW*FERMLHLLPSSSSF
Trigger: GAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTGCTGCTCGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS CCA 90 bp GTGCCACTGTGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTaGGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACCTTC +
Preference number: 5 (lower is better)
Translates to: VPLWMQRAASSSSVS*VSSPYTVPAARYTF
Trigger: GAAGGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCACAGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS CCA 90 bp GATCCTCCGCCGTTACCTCCAAATCTATGTAGAGCCCCCTGGGATTaGCTCCCTACCTCTTCAAGTCTGGCGGCTGTGGCGGAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: DPPPLPPNLCRAPWD*LPTSSSLAAVAERE
Trigger: CTCCCTTTCCGCCACAGCCGCCAGACTTGAAGAGGTAGGGAGCCAATCCCAGGGGGCTCTACATAGATTTGGAGGTAACGGCGGAGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS-3UTR CAA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGCACTGCCAAAGCGCTaGAAGCGGCTCTTCACATTA +
Preference number: 5 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTALPKR*KRLFTL
Trigger: TAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTGC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTAGGTTCTTCAGAACCTaGGCACTGCCAAAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTRFFRT*ALPKRL
Trigger: CAAGCGCTTTGGCAGTGCCAAGGTTCTGAAGAACCT...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTAGGTTCTTCAGAACCTaGGCACTGCCAAAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSRFFRT*ALPKRL
Trigger: CAAGCGCTTTGGCAGTGCCAAGGTTCTGAAGAACCT...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTGTAACTGGCCTCATTTaGCTTGTCCAGGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGVTGLI*LVQAVP
Trigger: GGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTAC...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCVGLGP*AASMEP
Trigger: AGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDSRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GACCTGGGACACAGCTTGCTCAAGGCCTCACTCCAGTCAAAGTCTTCCTCGCTACTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: DLGHSLLKASLQSKSSSLLCSRV*ALVPWL
Trigger: CAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG...TAGCGAGGAAGACTTTGACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AGTCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGGTCCCGCTCTTAGGTTaGGCCAGTAGTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SLTWSVPRGNIPFCLSGGVPLLG*ASSRVG
Trigger: CCCCACCCGACTACTGGCCAAACCTAAGAGCGGGAC...CCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGTCCCGCTCTTAGGTTaGGCCAGTAGTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCVPLLG*ASSRVG
Trigger: CCCCACCCGACTACTGGCCAAACCTAAGAGCGGGAC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTGCTGGCCAACTGGGGGTTGAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCCTGGCCAACTGGGGGTaGAAGTTCACGTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LLANWGLKFTSSSPCKRILANWG*KFTSSS
Trigger: AGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAG...GATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAA +
Preference number: 5 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVLIQSH*VCPTRK
Trigger: TTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCCATCAAATCCTaGGTGGTGCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RWLLGQGTVVYGRRQWVTGSIKS*VVPFLS
Trigger: GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCC...AGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCATGGAGCGCTGCTGTaGGAAGCCAGTGTCTTCATT +
Preference number: 5 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVHGALL*EASVFI
Trigger: AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTGGGAGACCTGCAGTCTaGATGGTTGAGCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIGRPAV*MVEQSP
Trigger: TGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCC...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS GCA 90 bp AGGCTTCCTCCTAGAATGTCGAAGCACGCGCCACTCTCCAGCCGGTaGTTCCTGTACAGGTTCTTCAGAACCTTGGCACTGCCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: RLPPRMSKHAPLSSR*FLYRFFRTLALPKR
Trigger: GCGCTTTGGCAGTGCCAAGGTTCTGAAGAACCTGTACAGGAAGCACCGGCTGGAGAGTGGCGCGTGCTTCGACATTCTAGGAGGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000459828.5
ENST00000475082.5
ENST00000482033.5
ENST00000539167.2
CDS CCA 90 bp CAGGAAGATCCTCCGCCGTTACCTCCAAATCTATGTAGAGCCCCCTaGGATTGGCTCCCTACCTCTTCAAGTCTGGCGGCTGTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: QEDPPPLPPNLCRAP*DWLPTSSSLAAVAE
Trigger: TTCCGCCACAGCCGCCAGACTTGAAGAGGTAGGGAGCCAATCCCAGGGGGCTCTACATAGATTTGGAGGTAACGGCGGAGGATCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTCACTGGCGCTTGGTGTaGACGAGGAAGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCHWRLV*TRKVKG
Trigger: GCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTG...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTCTCCACACTGGCGCTaGGTGTTGACGAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWSPHWR*VLTRKV
Trigger: CACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GTGCAGAGGATGGGGAGGCAGCTATGGGGCCTTGGTCAGAGCTCTGGGCCTGTGTGGCTCTTCTTCCACTaGCTGCTCACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VQRMGRQLWGLGQSSGPVWLFFH*LLTFAL
Trigger: AAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCA...CACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCATCCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVSRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RSARWVSSVPLWMQRAASKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...AGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCGGCAGCTATGGGGCCTaGGTCAGAGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGGSYGA*VRALGL
Trigger: CAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCC...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCGGCAGCTATGGGGCCTaGGTCAGAGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: HSACCQVYIFFQGSQLLIGSYGA*VRALGL
Trigger: CAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCC...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGCAGCTATGGGGCCTaGGTCAGAGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGSYGA*VRALGL
Trigger: CAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTGGACACTCTGGCTGTaGTCTTCAGAGGACAGACTT +
Preference number: 5 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSWTLWL*SSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGCCAGATGGGTCAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: WTWAAAVATWSSRSARWVNSSVA*MTFRTS
Trigger: AGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTT...GACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAA +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGLIQSH*VCPTRK
Trigger: TTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCTTCAGCATGGTGGACTaGGGCTGCAGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVFSMVD*GCSRGH
Trigger: GTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAA...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTTGTACCTGGGTCCTTaGCTTCTGATCCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHLYLGP*LLIPSS
Trigger: AGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGGAGCCTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTGGCTCCATCAAATCCTaGGTGGTGCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GSLRQRVGKTAVLKSETAGSIKS*VVPFLS
Trigger: GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCC...AGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCAGCGGGCGGCATCTTCTACATGGAGCGCTGCTGTaGGAAGCCAGTGTCTTCATT +
Preference number: 5 (lower is better)
Translates to: PPDGSHQCHCGCSGRHLLHGALL*EASVFI
Trigger: AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATG...TAGAAGATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCGGGAGACCTGCAGTCTaGATGGTTGAGCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: VRRDLWGLPGPCRSCYQLGRPAV*MVEQSP
Trigger: TGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCC...GAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS GCA 90 bp AGCGCATGCAGCAGTGCTCCACAAACTGCTGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCTCATCCAGCTTCTGCTTCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SACSSAPQTAGASRG*CTCCLPHPASASAH
Trigger: GTGAGCTGAAGCAGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS-3UTR CAA 90 bp GACCTGGGACACAGCTTGCTCAAGGCCTCACTCCAGTCAAAGTCTTCCTCGCTAGAGAGGATGCTGCACTaGCTGCCTTCCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: DLGHSLLKASLQSKSSSLERMLH*LPSSSS
Trigger: GCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTC...TAGCGAGGAAGACTTTGACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp CTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTTTGCAGACATTGAATTaGCAATCTCCACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: LLGQGTVVYGRRQWVTGSLQTLN*QSPHWR
Trigger: GCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAA...ACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCTCTTCTTCCACTaGCTGCTCACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: SMAVGSRHCRVRPEAVGHWLFFH*LLTFAL
Trigger: AAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCA...GTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTGGCTCTTCTTCCACTaGCTGCTCACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWWLFFH*LLTFAL
Trigger: AAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRLCSRV*ALVPWL
Trigger: CAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: WMQRAASSSSVSWVSSPYGSRAS*LMSVSD
Trigger: ATCAGAGACAGACATCAGCAATGAGGCTCGGGATCC...GTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: VRRDLWGLPGPCRSCYQLGSRAS*LMSVSD
Trigger: ATCAGAGACAGACATCAGCAATGAGGCTCGGGATCC...GAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTTGGACACTCTGGCTGTaGTCTTCAGAGGACAGACTT +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGWTLWL*SSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCA...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCAGTCTTTCAGCATGGTGGACTaGGGCTGCAGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: ACCQVYIFFQGSQLLIQSFSMVD*GCSRGH
Trigger: GTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAA...AGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACCATGGAGCGCTGCTGTaGGAAGCCAGTGTCTTCATT +
Preference number: 5 (lower is better)
Translates to: WMQRAASSSSVSWVSSPYHGALL*EASVFI
Trigger: AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATG...GTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTTCCTCCTCGCTaGCTGGCAGACGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSRLPPR*LADAAD
Trigger: GTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAAGCCT...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396217.7
ENST00000458441.5
CDS-3UTR CAA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGCGCTTGGTGTaGACGAGGAAGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRHWRLV*TRKVKG
Trigger: GCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTG...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGTCTCCACACTGGCGCTaGGTGTTGACGAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLSPHWR*VLTRKV
Trigger: CACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGA...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGCCTCAGAAGCCTCGCTaGCTGGCAGACGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVPQKPR*LADAAD
Trigger: GTCTGCTGCGTCTGCCAGCAAGCGAGGCTTCTGAGG...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
CDS-3UTR CAA 90 bp AGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCCTCTGTAGGTTCTTCAGAACCTaGGCACTGCCAAAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RDLWGLPGPCRSCYQLLCRFFRT*ALPKRL
Trigger: CAAGCGCTTTGGCAGTGCCAAGGTTCTGAAGAACCT...ACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR CAA 90 bp TGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: CWVKALSCTAGGSGSLAVPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...CACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTTGGCTCTTCTTCCACTaGCTGCTCACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGIWLFFH*LLTFAL
Trigger: AAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCA...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCVGLGP*AASMEP
Trigger: AGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCCTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSPYTVPAARYTFSSREVLCSRV*ALVPWL
Trigger: CAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG...GACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALLCSRV*ALVPWL
Trigger: CAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGTCCCGCTCTTAGGTTaGGCCAGTAGTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVVPLLG*ASSRVG
Trigger: CCCCACCCGACTACTGGCCAAACCTAAGAGCGGGAC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWGSRAS*LMSVSD
Trigger: ATCAGAGACAGACATCAGCAATGAGGCTCGGGATCC...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTCAGCATGGTGGACTaGGGCTGCAGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALFSMVD*GCSRGH
Trigger: GTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCACCTGGTCCTCCAGATCCGCCAGATGGGTCTCATCAGTGCCACTGTGGATGCTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: PPGPPDPPDGSHQCHCGCSSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...GCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GTTCAGCATGGTGGACTTGGGCTGCAGCCGTGGCCACCTGGTCCTCCAGATCCGTCCAGCAGTTTTCCTTaGGACAAATTGTTGACATGG +
Preference number: 5 (lower is better)
Translates to: VQHGGLGLQPWPPGPPDPSSSFP*DKLLTW
Trigger: CCATGTCAACAATTTGTCCAAAGGAAAACTGCTGGA...CGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCATTCTTAATGAGACATaGTTTCAGATAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: WLLGQGTVVYGRRQWVTGILNET*FQIALG
Trigger: GCCCAGGGCTATCTGAAACAATGTCTCATTAAGAAT...GCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS GCA 90 bp GCATGCAGCAGTGCTCCACAAACTGCTGGTGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCATCCAGCTTCTGCTTCAGCTCACTTA +
Preference number: 5 (lower is better)
Translates to: ACSSAPQTAGASRGC*TCCLPHPASASAHL
Trigger: TAAGTGAGCTGAAGCAGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS-3UTR CAA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGCACTGGCGCTTGGTGTaGACGAGGAAGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTHWRLV*TRKVKG
Trigger: GCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTG...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCTCCACACTGGCGCTaGGTGTTGACGAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGSPHWR*VLTRKV
Trigger: CACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCGAACCATTCCAGAGATaGGGCCCTCAGAAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: HSACCQVYIFFQGSQLLIEPFQR*GPQKPR
Trigger: GCGAGGCTTCTGAGGGCCCAATCTCTGGAATGGTTC...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGLHSPG*TQKGFL
Trigger: GAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAG...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCGTCCCGCTCTTAGGTTaGGCCAGTAGTCGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVVPLLG*ASSRVG
Trigger: CCCCACCCGACTACTGGCCAAACCTAAGAGCGGGAC...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGACCTGGGACACAGCTaGCTCAAGGCCTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVDLGHS*LKASLQ
Trigger: CTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGACCTGGGACACAGCTaGCTCAAGGCCTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCDLGHS*LKASLQ
Trigger: CTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCGACCTGGGACACAGCTaGCTCAAGGCCTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: SSPYTVPAARYTFSSREVDLGHS*LKASLQ
Trigger: CTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC...GACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGACCTGGGACACAGCTaGCTCAAGGCCTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCDLGHS*LKASLQ
Trigger: CTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLGEDGS*LGSSEP
Trigger: GGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCC...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTGGACACTCTGGCTGTaGTCTTCAGAGGACAGACTT +
Preference number: 5 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWWTLWL*SSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: GQGTVVYGRRQWVTGSGINSSVA*MTFRTS
Trigger: AGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTT...AATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGGCTTTCAGCATGGTGGACTaGGGCTGCAGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LLVKRTHGAMFNPAMVRAFSMVD*GCSRGH
Trigger: GTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAA...AGCCCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTGGCTCCATCAAATCCTaGGTGGTGCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCGSIKS*VVPFLS
Trigger: GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCC...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 5 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS GCA 90 bp AGCAGTGCTCCACAAACTGCTGGTGCTTCGAGAGGATGCTGCACTTaGTGCCTTCCTCATCCAGCTTCTGCTTCAGCTCACTTAGTCGTT +
Preference number: 5 (lower is better)
Translates to: SSAPQTAGASRGCCT*CLPHPASASAHLVV
Trigger: AACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS GCA 90 bp TCTGTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTaGTATCAACTCCTCTGTGGCATTGATGACTTTCAGGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SVRRDLWGLPGPCRS*YQLLCGIDDFQDFF
Trigger: GAAGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458292.5
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGAGAGGATGCTGCACTaGCTGCCTTCCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVERMLH*LPSSSS
Trigger: GCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGAGAGGATGCTGCACTaGCTGCCTTCCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALERMLH*LPSSSS
Trigger: GCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTC...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGGCTGAAATCCGGCTCTCAATATCTGAAATCTGGAGTTCAGCATGGTGGACTTCACTGGCGCTTGGTGTaGACGAGGAAGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GLKSGSQYLKSGVQHGGLHWRLV*TRKVKG
Trigger: GCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTG...AAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAAGGTTCTTCAGAACCTaGGCACTGCCAAAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGRFFRT*ALPKRL
Trigger: CAAGCGCTTTGGCAGTGCCAAGGTTCTGAAGAACCT...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TGGATGCAGCGGGCGGCATCTTCTAGCTCAGTCAGCTGGGTCTCCAGTCCATACCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: WMQRAASSSSVSWVSSPYPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...GTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGGCAGCTATGGGGCCTaGGTCAGAGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: NRENMYLKHGALLLEASVGSYGA*VRALGL
Trigger: CAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRGEDGS*LGSSEP
Trigger: GGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCC...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CAGTTAGCTCCTCCTTGTGGTCCCGCAGGTAACTGGCCTCATTTTGCTTGTCCACTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAA +
Preference number: 5 (lower is better)
Translates to: QLAPPCGPAGNWPHFACPLIQSH*VCPTRK
Trigger: TTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAG...TGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACCACAAGGAGGAGCTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTTGTACCTGGGTCCTTaGCTTCTGATCCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCLYLGP*LLIPSS
Trigger: AGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGCAGTGGAATTCCATGGTTCCAGCAGTTTTCCTTaGGACAAATTGTTGACATGG +
Preference number: 5 (lower is better)
Translates to: ALSCTAGGSGSLAVEFHGSSSFP*DKLLTW
Trigger: CCATGTCAACAATTTGTCCAAAGGAAAACTGCTGGA...ACCATGGAATTCCACTGCCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCGGGAGACCTGCAGTCTaGATGGTTGAGCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: HSACCQVYIFFQGSQLLIGRPAV*MVEQSP
Trigger: TGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCC...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS GCA 90 bp AGTGCTCCACAAACTGCTGGTGCTTCGAGAGGATGCTGCACTTGCTaGCTTCCTCATCCAGCTTCTGCTTCAGCTCACTTAGTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SAPQTAGASRGCCTC*LPHPASASAHLVVL
Trigger: AAGAACGACTAAGTGAGCTGAAGCAGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS-3UTR CAA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCGAGAGGATGCTGCACTaGCTGCCTTCCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLERMLH*LPSSSS
Trigger: GCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTC...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR CAA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCGAGAGGATGCTGCACTaGCTGCCTTCCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: DIVSDSPGHGMSESELLIERMLH*LPSSSS
Trigger: GCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTC...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR CAA 90 bp CATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCTCTCCACACTGGCGCTaGGTGTTGACGAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HHVDSGQCPKVEPVMVFLSPHWR*VLTRKV
Trigger: CACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGA...GAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302541.11
ENST00000396217.7
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTTGCAGACATTGAATTaGCAATCTCCACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: GLPRPSPQVEIHTVLDGCLQTLN*QSPHWR
Trigger: GCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAA...ACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCAGTAACTGGCCTCATTTaGCTTGTCCAGGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: PSPQVEIHTVLDGCWVKAVTGLI*LVQAVP
Trigger: GGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTAC...TGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGTAACTGGCCTCATTTaGCTTGTCCAGGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCVTGLI*LVQAVP
Trigger: GGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTAC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NRENMYLKHGALLLEASVVGLGP*AASMEP
Trigger: AGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCGEDGS*LGSSEP
Trigger: GGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCC...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSGSRAS*LMSVSD
Trigger: ATCAGAGACAGACATCAGCAATGAGGCTCGGGATCC...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCCTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAA +
Preference number: 5 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGLIQSH*VCPTRK
Trigger: TTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAG...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTGCTGGCCAACTGGGGGTTGAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: LLANWGLKFTSSSPCKRISSFAA*MYLWFV
Trigger: TACAAACCATAGATACATCAAGGCAGCAAAGGAGGA...GATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp ATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAGGCAGTGGGTCACTGGTTTCCTTTGGACAAATaGTTGACATGGAATACTAGC +
Preference number: 5 (lower is better)
Translates to: MAVGSRHCRVRPEAVGHWFPLDK*LTWNTS
Trigger: GCTAGTATTCCATGTCAACAATTTGTCCAAAGGAAA...CCAGTGACCCACTGCCTCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS CCA 90 bp GTGCCTGCTGCCAGGTATACCTTCTTCAGCTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGACAGACTTTCCTTCTGGTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: VPAARYTFFSSSWTL*LLSSEDRLSFWFSD
Trigger: ATCTGAGAACCAGAAGGAAAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAAGGTATACCTGGCAGCAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS-3UTR CAA 90 bp GTCAGGAGGGACTTGTGGGGACTCCCAGGGCCCTGTAGATCCTGCTATCAACTCAAGATTGAAGTCTCTTaGAACCACCTGAAGAACATG +
Preference number: 5 (lower is better)
Translates to: VRRDLWGLPGPCRSCYQLKIEVS*NHLKNM
Trigger: CATGTTCTTCAGGTGGTTCAAAGAGACTTCAATCTT...GAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGCACTGCCAAAGCGCTaGAAGCGGCTCTTCACATTA +
Preference number: 5 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCALPKR*KRLFTL
Trigger: TAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTGC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTAACTGGCCTCATTTaGCTTGTCCAGGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTVTGLI*LVQAVP
Trigger: GGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTAC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGTTGGCCTTGGTCCCTaGGCTGCCTCGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCVGLGP*AASMEP
Trigger: AGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTCTCGGGTGTTGGCCTaGGTCCCTTGGCTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCSRVLA*VPWLPR
Trigger: TCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCTCTGCTCTCGGGTGTaGGCCTTGGTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCLCSRV*ALVPWL
Trigger: CAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVGSRAS*LMSVSD
Trigger: ATCAGAGACAGACATCAGCAATGAGGCTCGGGATCC...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCTCACTTGGTCTGTCCCACGAGGAAACATCCCCTTCTGTCTGTCAGGAGGGACAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: SHLVCPTRKHPLLSVRRDNSSVA*MTFRTS
Trigger: AGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTT...GTCCCTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTTCAGCATGGTGGACTaGGGCTGCAGCCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCFSMVD*GCSRGH
Trigger: GTGGCCACGGCTGCAGCCCAAGTCCACCATGCTGAA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGTTGTACCTGGGTCCTTaGCTTCTGATCCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRLYLGP*LLIPSS
Trigger: AGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAA...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGTCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWSSFAA*MYLWFV
Trigger: TACAAACCATAGATACATCAAGGCAGCAAAGGAGGA...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTGGCTCCATCAAATCCTaGGTGGTGCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCGSIKS*VVPFLS
Trigger: GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCC...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGGGAGACCTGCAGTCTaGATGGTTGAGCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTGRPAV*MVEQSP
Trigger: TGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCC...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGCTAAACCACATCATGTaGACTCTGGACAGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLLNHIM*TLDSAL
Trigger: TAGGGCACTGTCCAGAGTCAACATGATGTGGTTTAG...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS CCA 90 bp AGGACACAGGGCACAGAGCTCCAAAATCTTCACTCCATGTCCTCATaGCCAGAAAAGCCCAGACAGAGGATAAGCCAGGTAGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RTQGTELQNLHSMSS*PEKPRQRISQVVFL
Trigger: TAAGAAGACTACCTGGCTTATCCTCTGTCTGGGCTTTTCTGGCCATGAGGACATGGAGTGAAGATTTTGGAGCTCTGTGCCCTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482033.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTAAGGCAGAGAGTGGGCAAGACCGCAGTGCTGAAGTCTGAGACGGCTTTCTGGAAGATTGAAGTCTCTTaGAACCACCTGAAGAACATG +
Preference number: 5 (lower is better)
Translates to: LRQRVGKTAVLKSETAFWKIEVS*NHLKNM
Trigger: CATGTTCTTCAGGTGGTTCAAAGAGACTTCAATCTT...CCAGAAAGCCGTCTCAGACTTCAGCACTGCGGTCTTGCCCACTCTCTGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGACAGCTCTTGCAGACATaGAATTTGCAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGQLLQT*NLQSPH
Trigger: GTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCTG...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLLHSPG*TQKGFL
Trigger: GAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAG...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGTGGCTCTTCTTCCACTaGCTGCTCACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: GLLLRWKYIQYSMAVGSRWLFFH*LLTFAL
Trigger: AAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCA...CCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGGCAGCTATGGGGCCTaGGTCAGAGCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: YGFKETTDMELESILVSIGSYGA*VRALGL
Trigger: CAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCGGATCCCGAGCCTCATaGCTGATGTCTGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICGSRAS*LMSVSD
Trigger: ATCAGAGACAGACATCAGCAATGAGGCTCGGGATCC...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTGGACACTCTGGCTGTaGTCTTCAGAGGACAGACTT +
Preference number: 5 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTWTLWL*SSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTGTACCTGGGTCCTTaGCTTCTGATCCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALLYLGP*LLIPSS
Trigger: AGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GTGCTATGTTTAATCCTGCAATGGTCAGGGCTGAAATCCGGCTCTCAATATCTGAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 5 (lower is better)
Translates to: VLCLILQWSGLKSGSQYLSTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...CAGATATTGAGAGCCGGATTTCAGCCCTGACCATTGCAGGATTAAACATAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GGTCTCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGATCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: GLQSIHSACCQVYIFFQGSSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...TCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ACCGGTGGAGCAGGCAGTTTCCTCCTTTGCTGCCTTGATGTATCTATGGTTTGTTTGCAGACATTGAATTaGCAATCTCCACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: TGGAGSFLLCCLDVSMVCLQTLN*QSPHWR
Trigger: GCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAA...ACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTTGCAGACATTGAATTaGCAATCTCCACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCLQTLN*QSPHWR
Trigger: GCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCAGCTGCTCATCCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HSACCQVYIFFQGSQLLILHSPG*TQKGFL
Trigger: GAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAG...GATGAGCAGCTGACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCTTACTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ADSRAGSIKSLVVPFLSLLHSPG*TQKGFL
Trigger: GAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAG...TAAGGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GCTGACTCCAGAGCAGGCTCCATCAAATCCTTGGTGGTGCCTTTCCTTTCCTTACCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: ADSRAGSIKSLVVPFLSLPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...TAAGGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTGGCTCTTCTTCCACTaGCTGCTCACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCWLFFH*LLTFAL
Trigger: AAGAGCAAAAGTGAGCAGCAAGTGGAAGAAGAGCCA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTGGACACTCTGGCTGTaGTCTTCAGAGGACAGACTT +
Preference number: 5 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICWTLWL*SSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCTTGTACCTGGGTCCTTaGCTTCTGATCCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: DIVSDSPGHGMSESELLILYLGP*LLIPSS
Trigger: AGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAA...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALSSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCSSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCTCCCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGATTCTTAATGAGACATaGTTTCAGATAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PPQAFSSGGNTYSTRWLLILNET*FQIALG
Trigger: GCCCAGGGCTATCTGAAACAATGTCTCATTAAGAAT...CAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATTCTTAATGAGACATaGTTTCAGATAGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVILNET*FQIALG
Trigger: GCCCAGGGCTATCTGAAACAATGTCTCATTAAGAAT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGAAAGATTGAAGTCTCTTaGAACCACCTGAAGAACATG +
Preference number: 5 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGKIEVS*NHLKNM
Trigger: CATGTTCTTCAGGTGGTTCAAAGAGACTTCAATCTT...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TCCAGTCCATACACAGTGCCTGCTGCCAGGTATACATTTTCTTCCAGGGAAGTCCAGCTCTTGCAGACATaGAATTTGCAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: SSPYTVPAARYTFSSREVQLLQT*NLQSPH
Trigger: GTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCTG...GACTTCCCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALLHSPG*TQKGFL
Trigger: GAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAG...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTCTGGCCAACTGGGGGTaGAAGTTCACGTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSLANWG*KFTSSS
Trigger: AGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAG...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGGCCGGATTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: IHTVLDGCWVKALSCTAGFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...TCCGGCCGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTNSSVA*MTFRTS
Trigger: AGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTT...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp CCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: PGLLLRWKYIQYSMAVGSSSFAA*MYLWFV
Trigger: TACAAACCATAGATACATCAAGGCAGCAAAGGAGGA...TGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATTAGACTGTCCCTAGTGCTCACTGCAGGGACTTGCTTTTCCCTTAGGATTTGCTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: IRLSLVLTAGTCFSLRICSSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...GCAAATCCTAAGGGAAAAGCAAGTCCCTGCAGTGAGCACTAGGGACAGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCATGGAGCGCTGCTGTaGGAAGCCAGTGTCTTCATT +
Preference number: 5 (lower is better)
Translates to: NRENMYLKHGALLLEASVHGALL*EASVFI
Trigger: AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GAAGTTCACGTCCAGCTCTCCATGCAAGCGCATCTTCTCAGCTGCAGGGTTCCTTTTCCTTTGGACAAATaGTTGACATGGAATACTAGC +
Preference number: 5 (lower is better)
Translates to: EVHVQLSMQAHLLSCRVPFPLDK*LTWNTS
Trigger: GCTAGTATTCCATGTCAACAATTTGTCCAAAGGAAA...AGGAACCCTGCAGCTGAGAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458441.5
CDS-3UTR CAA 90 bp GCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCTCCAGCAGTTTTCCTTaGGACAAATTGTTGACATGG +
Preference number: 5 (lower is better)
Translates to: AFSSGGNTYSTRWLLGQGSSSFP*DKLLTW
Trigger: CCATGTCAACAATTTGTCCAAAGGAAAACTGCTGGA...GCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTGCACTGCCAAAGCGCTaGAAGCGGCTCTTCACATTA +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCALPKR*KRLFTL
Trigger: TAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTGC...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AAACCACATCATGTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCCCATATGCCTCTGCTTaGGAAATTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: KPHHVDSGQCPKVEPVMVPYASA*EIASSM
Trigger: CATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGG...GACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAACATGATGTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTGTAACTGGCCTCATTTaGCTTGTCCAGGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFIVTGLI*LVQAVP
Trigger: GGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTAC...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTGGACACTCTGGCTGTaGTCTTCAGAGGACAGACTT +
Preference number: 5 (lower is better)
Translates to: NRENMYLKHGALLLEASVWTLWL*SSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCA...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTCTCATCCAGTCTCACTaGGTCTGTCCCACGAGGAAA +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCLIQSH*VCPTRK
Trigger: TTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAG...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTTCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: QVEIHTVLDGCWVKALSCSSFAA*MYLWFV
Trigger: TACAAACCATAGATACATCAAGGCAGCAAAGGAGGA...ACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVSSFAA*MYLWFV
Trigger: TACAAACCATAGATACATCAAGGCAGCAAAGGAGGA...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTAGTACTCGATGGCTGTaGGGTCAAGGCACTGTCGTG +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFISTRWL*GQGTVV
Trigger: CACGACAGTGCCTTGACCCAACAGCCATCGAGTACT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGGGAGACCTGCAGTCTaGATGGTTGAGCAATCCCCA +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSGRPAV*MVEQSP
Trigger: TGGGGATTGCTCAACCATCAAGACTGCAGGTCTCCC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CCCAGGCCTTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCATATGGGAAAACCTATaGAATAAGGTTGCCATAAGG +
Preference number: 5 (lower is better)
Translates to: PRPSPQVEIHTVLDGCWVIWENL*NKVAIR
Trigger: CCTTATGGCAACCTTATTCAATAGGTTTTCCCATAT...GACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAAGGCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp TCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGAAGATTGAAGTCTCTTaGAACCACCTGAAGAACATG +
Preference number: 5 (lower is better)
Translates to: SGGNTYSTRWLLGQGTVVKIEVS*NHLKNM
Trigger: CATGTTCTTCAGGTGGTTCAAAGAGACTTCAATCTT...CACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGCACTGCCAAAGCGCTaGAAGCGGCTCTTCACATTA +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSALPKR*KRLFTL
Trigger: TAATGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTGC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000458292.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTAAACTGGGGCCAGGTTaGTTTCATCCAGCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFIKLGPG*FHPACP
Trigger: TGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTGGGGAAGATGGTTCTTaGCTTGGCTCTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: YGFKETTDMELESILVSIGEDGS*LGSSEP
Trigger: GGGCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCC...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp TCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SPQVEIHTVLDGCWVKALFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...CAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTTTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: LLRWKYIQYSMAVGSRHCFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...ACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGGCTCCATCAAATCCTaGGTGGTGCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSGSIKS*VVPFLS
Trigger: GGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCC...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCATGGAGCGCTGCTGTaGGAAGCCAGTGTCTTCATT +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFIHGALL*EASVFI
Trigger: AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GACATTGTTTCAGATAGCCCTGGGCATGGCATGAGTGAGTCAGAACTTCTCATCTCCAGCAGTTTTCCTTaGGACAAATTGTTGACATGG +
Preference number: 5 (lower is better)
Translates to: DIVSDSPGHGMSESELLISSSFP*DKLLTW
Trigger: CCATGTCAACAATTTGTCCAAAGGAAAACTGCTGGA...GATGAGAAGTTCTGACTCACTCATGCCATGCCCAGGGCTATCTGAAACAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NRENMYLKHGALLLEASVLHSPG*TQKGFL
Trigger: GAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAG...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp CTTCTTGTGAAGCGCACACATGGTGCTATGTTTAATCCTGCAATGGTCAGGGCTTTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: LLVKRTHGAMFNPAMVRAFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...AGCCCTGACCATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp TTCTCCTCAGGTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTTTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: FSSGGNTYSTRWLLGQGTFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...AGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCACCTGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GTGGAAATACATACAGTACTCGATGGCTGTTGGGTCAAGGCACTGTCGTGTACGTTTCCTTTGGACAAATaGTTGACATGGAATACTAGC +
Preference number: 5 (lower is better)
Translates to: VEIHTVLDGCWVKALSCTFPLDK*LTWNTS
Trigger: GCTAGTATTCCATGTCAACAATTTGTCCAAAGGAAA...CGTACACGACAGTGCCTTGACCCAACAGCCATCGAGTACTGTATGTATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GTTGACTCTGGACAGTGCCCTAAAGTTGAGCCAGTGATGGTCTTTCTCAAGACCATATGGGAAAACCTATaGAATAAGGTTGCCATAAGG +
Preference number: 5 (lower is better)
Translates to: VDSGQCPKVEPVMVFLKTIWENL*NKVAIR
Trigger: CCTTATGGCAACCTTATTCAATAGGTTTTCCCATAT...GGTCTTGAGAAAGACCATCACTGGCTCAACTTTAGGGCACTGTCCAGAGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTTTGCAGACATTGAATTaGCAATCTCCACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSLQTLN*QSPHWR
Trigger: GCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAA...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTCTTCATTTTCTGTCTaGGATTCCCCTGGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFISSFSV*DSPGSL
Trigger: TAGGCTCCCAGGGGAATCCAAGACAGAAAATGAAGA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCTAAACCACATCATGTaGACTCTGGACAGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFILNHIM*TLDSAL
Trigger: TAGGGCACTGTCCAGAGTCAACATGATGTGGTTTAG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS GCA 90 bp CCATCACACTATGTCCTTCTGACTGCCTATAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCATTCTCCAGGTTTGACTCAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: PSHYVLLTAYKMLNH*QKCFLHSPGLTQKG
Trigger: GCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGACATAGTGTGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000459828.5
ENST00000482033.5
ENST00000539167.2
CDS GCA 90 bp TATGTCCTTCTGACTGCCTATAAAATGTTGAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGTTTGACTCAAAAAGGCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: YVLLTAYKMLNHCQK*FLHSPGLTQKGFLL
Trigger: GAGGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396217.7
ENST00000458441.5
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTCAGCTCTTGCAGACATaGAATTTGCAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSQLLQT*NLQSPH
Trigger: GTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCTG...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTCAGCTCTTGCAGACATaGAATTTGCAATCTCCACAC +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFIQLLQT*NLQSPH
Trigger: GTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCTG...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTAACTCCTCTGTGGCATaGATGACTTTCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSNSSVA*MTFRTS
Trigger: AGAAGTCCTGAAAGTCATCAATGCCACAGAGGAGTT...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp TATGGGTTCAAAGAAACCACAGACATGGAGTTAGAGTCAATTCTTGTGTCCATTCTAAACCACATCATGTaGACTCTGGACAGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: YGFKETTDMELESILVSILNHIM*TLDSAL
Trigger: TAGGGCACTGTCCAGAGTCAACATGATGTGGTTTAG...AATGGACACAAGAATTGACTCTAACTCCATGTCTGTGGTTTCTTTGAACCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS GCA 90 bp TATGTCCTTCTGACTGCCTATAAAATGTTGAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGTTTGACTCAAAAAGGCTTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: YVLLTAYKMLNHCQK*FLHSPGLTQKGFLL
Trigger: TAGGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000459828.5
ENST00000482033.5
ENST00000539167.2
CDS GCA 90 bp CTTTACCTTCTGACTGCCTATAAAATGTTGAATCACTGCCAGAAATaGTTCCTTCATTCTCCAGGTTTGACTCAAAAAGGCTTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: LYLLTAYKMLNHCQK*FLHSPGLTQKGFLL
Trigger: TAGGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGTAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTCCTCCTTTGCTGCCTaGATGTATCTATGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFISSFAA*MYLWFV
Trigger: TACAAACCATAGATACATCAAGGCAGCAAAGGAGGA...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp AACAGGGAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCATATGGGAAAACCTATaGAATAAGGTTGCCATAAGG +
Preference number: 5 (lower is better)
Translates to: NRENMYLKHGALLLEASVIWENL*NKVAIR
Trigger: CCTTATGGCAACCTTATTCAATAGGTTTTCCCATAT...GACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTCCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000539167.2
CDS GCA 90 bp CTTAAGCAACTTTACCTTCTGACTGCCTATAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCATTCTCCAGGTTTGACTCAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: LKQLYLLTAYKMLNH*QKCFLHSPGLTQKG
Trigger: GCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGTAAAGTTGCTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS-3UTR CAA 90 bp GAAAATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTAAGATTGAAGTCTCTTaGAACCACCTGAAGAACATG +
Preference number: 5 (lower is better)
Translates to: ENMYLKHGALLLEASVFIKIEVS*NHLKNM
Trigger: CATGTTCTTCAGGTGGTTCAAAGAGACTTCAATCTT...AATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS-3UTR CAA 90 bp ATATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTTTTCACTCATTTTCATaGCTAACTCGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: ICILNMERCCWKPVSSFSFHSFS*LTRTAC
Trigger: ACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAA...AGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS-3UTR CAA 90 bp ATGTATCTTAAACATGGAGCGCTGCTGTTGGAAGCCAGTGTCTTCATTTTCTGTTTTCCTTTGGACAAATaGTTGACATGGAATACTAGC +
Preference number: 5 (lower is better)
Translates to: MYLKHGALLLEASVFIFCFPLDK*LTWNTS
Trigger: GCTAGTATTCCATGTCAACAATTTGTCCAAAGGAAA...ACAGAAAATGAAGACACTGGCTTCCAACAGCAGCGCTCCATGTTTAAGATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000458292.5
ENST00000458441.5
ENST00000539167.2
CDS GCA 72 bp AGGCTGCCGGCGGCGAAGAAGGGGCGCGGGTCGGTCTaGGCGCTAAAGCTGGGCTGCAGCACCGCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: RLPAAKKGRGSV*ALKLGCSTAGA
Trigger: AGCCCCCGCGGTGCTGCAGCCCAGCTTTAGCGCGCAGACCGACCCGCGCCCCTTCTTCGCCGCCGGCAGCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS GCA 72 bp GGGCACCTGCCGCAACGCGCCGCGTGGATTAGAGGCTaGCGGCGGCGAAGAAGGGGCGCGGGTCGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: GHLPQRAAWIRG*RRRRRGAGRSA
Trigger: CGCAGACCGACCCGCGCCCCTTCTTCGCCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGGCAGGTGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS GCA 72 bp AAGGGGCGCGGGTCGGTCTGCGCGCTAAAGCTGGGCTaGAGCACCGCGGGGGCTCGGCTGCCAGAACCGCAG +
Preference number: 6 (lower is better)
Translates to: KGRGSVCALKLG*STAGARLPEPQ
Trigger: CTGCGGTTCTGGCAGCCGAGCCCCCGCGGTGCTGCAGCCCAGCTTTAGCGCGCAGACCGACCCGCGCCCCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS GCA 72 bp GCTCAGGCCACCGCGCCTCAGTACGCCCAGGGCACCTaGCGCAACGCGCCGCGTGGATTAGAGGCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: AQATAPQYAQGT*RNAPRGLEAAG
Trigger: GCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGGCAGGTGCCCTGGGCGTACTGAGGCGCGGTGGCCTGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS CCA 72 bp TCAGTACGCCCAGGGCACCTGCCGCAACGCGCCGCGTaGATTAGAGGCTGCCGGCGGCGAAGAAGGGGCGCG +
Preference number: 6 (lower is better)
Translates to: SVRPGHLPQRAA*IRGCRRRRRGA
Trigger: CGCGCCCCTTCTTCGCCGCCGGCAGCCTCTAATCCACGCGGCGCGTTGCGGCAGGTGCCCTGGGCGTACTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
CDS CCA 72 bp GCCAGCCTGAAGCAAGTCCGCGACCGGGGTCATCGATaGCGGCCGGGCTCAGGCCACCGCGCCTCAGTACGC +
Preference number: 6 (lower is better)
Translates to: ASLKQVRDRGHR*RPGSGHRASVR
Trigger: GCGTACTGAGGCGCGGTGGCCTGAGCCCGGCCGCCATCGATGACCCCGGTCGCGGACTTGCTTCAGGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000458292.5
ENST00000458441.5
CDS CCA 72 bp GAGCCCCCTGGGATTGGCTCCCTACCTCTTCAAGTCTaGCGGCTGTGGCGGAAAGGGAGTATGAGGAGGAAC +
Preference number: 6 (lower is better)
Translates to: EPPGIGSLPLQV*RLWRKGSMRRN
Trigger: GTTCCTCCTCATACTCCCTTTCCGCCACAGCCGCCAGACTTGAAGAGGTAGGGAGCCAATCCCAGGGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS GCA 72 bp TGGGCCCTCAGAAGCCCGATGGGCCTGAGGGACTTCTaGATCCAGGAGATTACGGTAGGGAACAAGTCAGGT +
Preference number: 6 (lower is better)
Translates to: WALRSPMGLRDF*IQEITVGNKSG
Trigger: ACCTGACTTGTTCCCTACCGTAATCTCCTGGATGCAGAAGTCCCTCAGGCCCATCGGGCTTCTGAGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459828.5
CDS CCA 72 bp CCGTTACCTCCAAATCTATGTAGAGCCCCCTGGGATTaGCTCCCTACCTCTTCAAGTCTGGCGGCTGTGGCG +
Preference number: 6 (lower is better)
Translates to: PLPPNLCRAPWD*LPTSSSLAAVA
Trigger: CGCCACAGCCGCCAGACTTGAAGAGGTAGGGAGCCAATCCCAGGGGGCTCTACATAGATTTGGAGGTAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS CCA 72 bp CCTCCGCCGTTACCTCCAAATCTATGTAGAGCCCCCTaGGATTGGCTCCCTACCTCTTCAAGTCTGGCGGCT +
Preference number: 6 (lower is better)
Translates to: PPPLPPNLCRAP*DWLPTSSSLAA
Trigger: AGCCGCCAGACTTGAAGAGGTAGGGAGCCAATCCCAGGGGGCTCTACATAGATTTGGAGGTAACGGCGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS TCA 72 bp GCTCCAAAAAGCCGCAGGTCTTGGGGTTCCCACCACTaGATCTTTCCGCTCCACGCGTCCATCAGGAAGATC +
Preference number: 6 (lower is better)
Translates to: APKSRRSWGSHH*IFPLHASIRKI
Trigger: GATCTTCCTGATGGACGCGTGGAGCGGAAAGATTCAGTGGTGGGAACCCCAAGACCTGCGGCTTTTTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS GCA 72 bp AGCAGTGCTCCACAAACTGCTGGTGCTTCGAGAGGATaGTGCACTTGCTGCCTTCCTCATCCAGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SSAPQTAGASRG*CTCCLPHPASA
Trigger: AGCAGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS GCA 72 bp CTCAGTCAGCTGGGTCTCCAGTCCATACACAGTGCCTaGTGCCAGGTATACCTTCTTCAGCTCTTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: LSQLGLQSIHSA*CQVYLLQLFLD
Trigger: GTCCAGGAAGAGCTGAAGAAGGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS CAA 72 bp TCCAGCCGGTGCTTCCTGTACAGGTTCTTCAGAACCTaGGCACTGCCAAAGCGCTTGAAGCGGCTCTTCACA +
Preference number: 6 (lower is better)
Translates to: SSRCFLYRFFRT*ALPKRLKRLFT
Trigger: TGTGAAGAGCCGCTTCAAGCGCTTTGGCAGTGCCAAGGTTCTGAAGAACCTGTACAGGAAGCACCGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000459828.5
ENST00000475082.5
ENST00000482033.5
ENST00000539167.2
CDS GCA 72 bp AGTGCTCCACAAACTGCTGGTGCTTCGAGAGGATGCTaGACTTGCTGCCTTCCTCATCCAGCTTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: SAPQTAGASRGC*TCCLPHPASAS
Trigger: TGAAGCAGAAGCTGGATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS CAA 72 bp GCGGCTCTTCACATTATTGTAGAACCATTCCAGAGATaGGGCCCTCAGAAGCCCGATGGGCCTGAGGGACTT +
Preference number: 6 (lower is better)
Translates to: AALHIIVEPFQR*GPQKPDGPEGL
Trigger: AAGTCCCTCAGGCCCATCGGGCTTCTGAGGGCCCAATCTCTGGAATGGTTCTACAATAATGTGAAGAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459828.5
CDS CCA 72 bp CAGCTCTTGCAGACATTGAATTTGCAATCTCCACACTaGCGCTTGGTGTTGACGAGGAAGGTGAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: QLLQTLNLQSPH*RLVLTRKVKGE
Trigger: CTCGCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000475082.5
CDS CCA 72 bp GTGCCTGCTGCCAGGTATACCTTCTTCAGCTCTTCCTaGACACTCTGGCTGTTGTCTTCAGAGGACAGACTT +
Preference number: 6 (lower is better)
Translates to: VPAARYTFFSSS*TLWLLSSEDRL
Trigger: AAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAAGGTATACCTGGCAGCAGGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS CCA 72 bp CAGGGAGACTCACACACAGTAGTAGATAGTTGCATCTaGGGTAACAATGCATCTGGGGGACCCTGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: QGDSHTVVDSCI*GNNASGGPWQY
Trigger: GTACTGCCAGGGTCCCCCAGATGCATTGTTACCCCAGATGCAACTATCTACTACTGTGTGTGAGTCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475082.5
CDS CCA 72 bp GCCAGGTATACCTTCTTCAGCTCTTCCTGGACACTCTaGCTGTTGTCTTCAGAGGACAGACTTTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: ARYTFFSSSWTL*LLSSEDRLSFW
Trigger: CCAGAAGGAAAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCAGGAAGAGCTGAAGAAGGTATACCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425621.5
CDS CCA 72 bp GGCACAGAGCTCCAAAATCTTCACTCCATGTCCTCATaGCCAGAAAAGCCCAGACAGAGGATAAGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: GTELQNLHSMSS*PEKPRQRISQV
Trigger: TACCTGGCTTATCCTCTGTCTGGGCTTTTCTGGCCATGAGGACATGGAGTGAAGATTTTGGAGCTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482033.5
ENST00000539167.2
CDS CAA 72 bp AATCACTGCCAGAAATGCTTCCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTCCTCGCTTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: NHCQKCFLHSPG*TQKGFLLACWQ
Trigger: CTGCCAGCAAGCGAGGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396217.7
ENST00000458441.5
CDS CAA 72 bp AATCACTGCCAGAAATGCTTCCTTCATTCTCCAGGTTaGACTCAAAAAGGCTTCCTCCTAGAATGTCGAAGC +
Preference number: 6 (lower is better)
Translates to: NHCQKCFLHSPG*TQKGFLLECRS
Trigger: GCTTCGACATTCTAGGAGGAAGCCTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000302541.11
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000459828.5
ENST00000475082.5
ENST00000482033.5
ENST00000539167.2
CDS GCA 72 bp TATGTCCTTCTGACTGCCTATAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCATTCTCCAGGTTTGACT +
Preference number: 6 (lower is better)
Translates to: YVLLTAYKMLNH*QKCFLHSPGLT
Trigger: AGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000302541.11
ENST00000396217.7
ENST00000425621.5
ENST00000444716.5
ENST00000458292.5
ENST00000458441.5
ENST00000459828.5
ENST00000482033.5
ENST00000539167.2
CDS GCA 72 bp CTTTACCTTCTGACTGCCTATAAAATGTTGAATCACTaGCAGAAATGCTTCCTTCATTCTCCAGGTTTGACT +
Preference number: 6 (lower is better)
Translates to: LYLLTAYKMLNH*QKCFLHSPGLT
Trigger: AGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAGAAGGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475082.5