RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYRFL (Homo sapiens)

Ensembl gene IDs: ENSG00000166268

Ensembl transcript IDs: ENST00000299350.5, ENST00000535034.5, ENST00000547771.6, ENST00000548892.5, ENST00000552032.7

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTTGGAAGCTAAAGCCTaGAAAAGTCCTTCAGCAATA +
Preference number: 2 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFLEAKA*KSPSAI
Trigger: TATTGCTGAAGGACTTTTTCAGGCTTTAGCTTCCAA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
3UTR-3UTR TCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTTGGAAGCTAAAGCCTaGAAAAGTCCTTCAGCAATA +
Preference number: 2 (lower is better)
Translates to: PHISSTYHITHSQESMFSLEAKA*KSPSAI
Trigger: TATTGCTGAAGGACTTTTTCAGGCTTTAGCTTCCAA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
3UTR-3UTR CCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATGTCTCAAAACTGTTaGAAGCTAAAGCCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: STYHITHSQESMFSGPKSMSQNC*KLKPEK
Trigger: TTTTTCAGGCTTTAGCTTCCAACAGTTTTGAGACAT...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
3UTR-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACCTGAGTATTTTTCTTaGGTAAAGTCCCCAAACTTG +
Preference number: 3 (lower is better)
Translates to: PHTISHILKSLCLVGRSRPEYFS*VKSPNL
Trigger: CAAGTTTGGGGACTTTACCAAAGAAAAATACTCAGG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
3UTR-3UTR CAA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGATTCAACAGAACTGTTaGCTCCAGGAAATGTTTTCT +
Preference number: 3 (lower is better)
Translates to: ISSTYHITHSQESMFSGPIQQNC*LQEMFS
Trigger: AGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAAT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
3UTR-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCCTGAGTATTTTTCTTaGGTAAAGTCCCCAAACTTG +
Preference number: 3 (lower is better)
Translates to: SKHFILLINVSKLLEAKAPEYFS*VKSPNL
Trigger: CAAGTTTGGGGACTTTACCAAAGAAAAATACTCAGG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
3UTR-3UTR CAA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCCTGAGTATTTTTCTTaGGTAAAGTCCCCAAACTTG +
Preference number: 3 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGPEYFS*VKSPNL
Trigger: CAAGTTTGGGGACTTTACCAAAGAAAAATACTCAGG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTCTGCAGCGGGTGCATaGGCGGCATCGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFSAAGA*AASQEQ
Trigger: CTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGGTGCTCTGCAGCGGGTaGATGGGCGGCATCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPVLCSG*MGGIAG
Trigger: TCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCAC...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGAGTCCTCCCAGCTGTaGGCCTCAGGGTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGESSQL*ASGLGS
Trigger: GCTACCCAACCCTGAGGCCCACAGCTGGGAGGACTC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGCGCCCATTCCAGAGGTaGTCTGCAGCGGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSRPFQR*SAAGAW
Trigger: CCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCG...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAGGGGTGTCTGGGAGCTaGCGTTGCAAGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRGVSGS*RCKAPK
Trigger: TTTGGGGGCCTTGCAACGCCAGCTCCCAGACACCCC...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGATAGGGCGGGGTGTCTaGGAGCTGGCGTTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPIGRGV*ELALQG
Trigger: GCCTTGCAACGCCAGCTCCCAGACACCCCGCCCTAT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTGTCATCGGTCTGCAGTaGCAGGCCCACACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFVIGLQ*QAHTRH
Trigger: ATGCCGAGTGTGGGCCTGCCACTGCAGACCGATGAC...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCTGCGGAGGAGAGCATaGGTCGGATGCAGAATAGGG +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGLRRRA*VGCRIG
Trigger: CCCTATTCTGCATCCGACTCATGCTCTCCTCCGCAG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCTTGGTTGGAGGCAATaGGGCTCCAGGGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGLGWRQ*GSRAVT
Trigger: TGTCACAGCCCTGGAGCCTCATTGCCTCCAACCAAG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGGTGTCTGGGAGCTaGCGTTGCAAGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSGVSGS*RCKAPK
Trigger: TTTGGGGGCCTTGCAACGCCAGCTCCCAGACACCCC...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGGAGCAGCTGTGGGGTaGAGAAAAGGAGCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGGAAVG*RKGAGV
Trigger: GACTCCAGCTCCTTTTCTCCACCCCACAGCTGCTCC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGGGATGTATTAGGTGCTaGGGAGGAGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPGCIRC*GGGCGQ
Trigger: CTGCCCACAGCCTCCTCCTCAGCACCTAATACATCC...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTATGACTTCCAACTACTaGGCCGCTTTAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFMTSNY*AALAGP
Trigger: TGGCCCGGCTAAAGCGGCTCAGTAGTTGGAAGTCAT...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCTCTGGGAGCTGGCGTTaGAAGGCCCCCAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGSGSWR*KAPKSK
Trigger: CTTTGATTTGGGGGCCTTGCAACGCCAGCTCCCAGA...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTCGGCTGTCAGAGGGATaGATGATGGTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFRLSEG*MMVPIT
Trigger: AGTGATGGGGACCATCATGCATCCCTCTGACAGCCG...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCAAGCCTCCGTGGATTTaGCAGGAGTCGCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGKPPWI*QESPIP
Trigger: TGGAATGGGCGACTCCTGCCAAATCCACGGAGGCTT...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTCACTGTCAGGGTCCTaGACTTCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFSLSGS*TSLLRL
Trigger: GAGTCGCAGCAGTGAAGTCCAGGACCCTGACAGTGA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCGGATGTATTAGGTGCTaGGGAGGAGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGGCIRC*GGGCGQ
Trigger: CTGCCCACAGCCTCCTCCTCAGCACCTAATACATCC...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACCCAGTCAGGGCCGCTaGGTGCATTTCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRPSQGR*VHFLPK
Trigger: TTTTGGCAAGAAATGCACTCAGCGGCCCTGACTGGG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGTACCATTGGCTCCCTaGGCTTCAAAGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGVPLAP*ASKNCC
Trigger: GCAGCAGTTCTTTGAAGCTCAGGGAGCCAATGGTAC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCGGTAGCATGCACCTTTaGCCTGCGGAGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGGSMHL*PAEESM
Trigger: CATGCTCTCCTCCGCAGGTCAAAGGTGCATGCTACC...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCAAGATGACTGGCGTTTaGGTGGCAGCTGTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGKMTGV*VAAVKA
Trigger: GGCTTTCACAGCTGCCACTCAAACGCCAGTCATCTT...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCTTGGTTGGAGGCAATaGGGCTCCAGGGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGLGWRQ*GSRAVT
Trigger: TGTCACAGCCCTGGAGCCTCATTGCCTCCAACCAAG...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCATGCACCTTTGACCTaGGGAGGAGAGCATGAGTCG +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPHAPLT*GGEHES
Trigger: CGACTCATGCTCTCCTCCGCAGGTCAAAGGTGCATG...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTGAGTCCTCCAGTGCCTaGGTGCACTTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFESSSA*VHFLFL
Trigger: CAAGAAGAGAAAGTGCACGCAGGCACTGGAGGACTC...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCACCTCCTGGATATTCTaGTTTGCCCGGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGTSWIF*FARLSE
Trigger: CTCTGACAGCCGGGCAAAGCAGAATATCCAGGAGGT...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCATGCTGTCAGAAAATaGGGCTACAGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGHAVRK*GYREAP
Trigger: TGGAGCCTCCCTGTAGCCCCATTTTCTGACAGCATG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGTGTGGGCCTCAGGGTTaGGTAGCATGCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSCGPQG*VACTFD
Trigger: GTCAAAGGTGCATGCTACCCAACCCTGAGGCCCACA...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGCCTCCGTGGATTTaGCAGGAGTCGCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPKPPWI*QESPIP
Trigger: TGGAATGGGCGACTCCTGCCAAATCCACGGAGGCTT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCAACCTATCCCCAGATaGGAGGACACGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPQPIPR*EDTDWS
Trigger: GGACCAATCCGTGTCCTCCCATCTGGGGATAGGTTG...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTAGGCTCCAAATGTGCTaGTATCCCTGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFRLQMC*YPCVIS
Trigger: GGAGATGACACAGGGATATCAGCACATTTGGAGCCT...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTTGCTGTGGTTTCGCTaGAGTGTAATCGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFLLWFR*SVIVPV
Trigger: CACTGGGACGATTACACTTCAGCGAAACCACAGCAA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGGTCCTTATCCACCATaGGGAAGTTCTCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGGPYPP*GSSPRS
Trigger: AGACCTTGGAGAACTTCCTCATGGTGGATAAGGACC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGCTTCAAAGAACTGCTaGAGGGCCTCATTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGASKNC*RASFSP
Trigger: AGGCGAAAATGAGGCCCTGCAGCAGTTCTTTGAAGC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGTGCTCTGCAGCGGGTaGATGGGCGGCATCGCAGGA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAVLCSG*MGGIAG
Trigger: TCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCAC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGCCTGGACTTCACTGCTaGGACTCCTACTTGTCATCG +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSPGLHC*DSYLSS
Trigger: CGATGACAAGTAGGAGTCGCAGCAGTGAAGTCCAGG...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGGGTCCTGGACTTCACTaGTGCGACTCCTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSGPGLH*CDSYLS
Trigger: TGACAAGTAGGAGTCGCAGCAGTGAAGTCCAGGACC...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACTGGATATTCTGCTTTaGCCGGCTGTCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRLDILL*PAVRGM
Trigger: CATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACCTCCTGGATATTCTaGTTTGCCCGGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSTSWIF*FARLSE
Trigger: CTCTGACAGCCGGGCAAAGCAGAATATCCAGGAGGT...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCATGCTGTCAGAAAATaGGGCTACAGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPHAVRK*GYREAP
Trigger: TGGAGCCTCCCTGTAGCCCCATTTTCTGACAGCATG...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTCTGCAGCGGGTGCATaGGCGGCATCGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGSAAGA*AASQEQ
Trigger: CTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCGGGTGGCAAGATGACTaGCGTTTGAGTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGGWQDD*RLSGSC
Trigger: ACAGCTGCCACTCAAACGCCAGTCATCTTGCCACCC...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTCACTGTCAGGGTCCTaGACTTCACTGCTGCGACTC +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSSLSGS*TSLLRL
Trigger: GAGTCGCAGCAGTGAAGTCCAGGACCCTGACAGTGA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATCTGACCATCGCCTCTaGTGGAATTCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRSDHRL*WNSFSS
Trigger: TGAGGAGAAGGAATTCCATCAGAGGCGATGGTCAGA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAAGGCTCCAAATGTGCTaGTATCCCTGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRRLQMC*YPCVIS
Trigger: GGAGATGACACAGGGATATCAGCACATTTGGAGCCT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTTTGAGTGGCAGCTGTaGAAGCCTCCGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSFEWQL*KPPWIW
Trigger: CCAAATCCACGGAGGCTTTCACAGCTGCCACTCAAA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGTCCAACCACCAACATaGAGTATCTCTGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGVQPPT*SISGLD
Trigger: ATCCAGACCAGAGATACTTCATGTTGGTGGTTGGAC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGTGTCAGAGGGATGCATaGTGGTCCCCATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSCQRDA*WSPSLS
Trigger: TGAAAGTGATGGGGACCATCATGCATCCCTCTGACA...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGGGACACGTCGGTCTTaGTCTTTTAAGCAAAATGCC +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGGTRRS*SFKQNA
Trigger: GGCATTTTGCTTAAAAGATCAAGACCGACGTGTCCC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547771.6
CDS-3UTR GCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAATTCCAGAGGTGCTCTaGAGCGGGTGCATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIIPEVL*SGCMGG
Trigger: GCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAAT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGACACTATGGCATGGTTaGCACTTCAGAGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPTLWHG*HFRAGE
Trigger: CTCTCCTGCTCTGAAGTGGCAACCATGCCATAGTGT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGGGAACTTGTCCTCGCTaGCACAATGCATCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPGTCPR*HNASLS
Trigger: TGACAGTGATGCATTGTGGCAGCGAGGACAAGTTCC...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCATCACTTTCATGTTaGCACAGACAACCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGPSLSC*HRQPGL
Trigger: AAGCCCTGGTTGTCTGTGGCAACATGAAAGTGATGG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCTGGATATTCTGCTTTaGCCGGCTGTCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGLDILL*PAVRGM
Trigger: CATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAG...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATAGGGCGGGGTGTCTaGGAGCTGGCGTTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPIGRGV*ELALQG
Trigger: GCCTTGCAACGCCAGCTCCCAGACACCCCGCCCTAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCGAGTCCTCCCAGCTGTaGGCCTCAGGGTTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGESSQL*ASGLGS
Trigger: GCTACCCAACCCTGAGGCCCACAGCTGGGAGGACTC...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTGCACTTTCTCTTCTTaGTTGGAGGCAATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFCTFSS*LEAMRL
Trigger: GAGCCTCATTGCCTCCAACCAAGAAGAGAAAGTGCA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAATGAACGGCCCTTCTTaGAGAAGATGCACTAACGGC +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRMNGPS*RRCTNG
Trigger: GCCGTTAGTGCATCTTCTCCAAGAAGGGCCGTTCAT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCGCTCCTGTGAGCTTGTaGTATTGCTTGGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGAPVSL*YCLEGD
Trigger: ATCTCCCTCCAAGCAATATCACAAGCTCACAGGAGC...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCATTCCTACTCGACCGTaGCAGACAATAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGIPTRP*QTIDSG
Trigger: TCCAGAATCTATTGTCTGTCACGGTCGAGTAGGAAT...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGCTTCAAAGAACTGCTaGAGGGCCTCATTTTCGCCT +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSASKNC*RASFSP
Trigger: AGGCGAAAATGAGGCCCTGCAGCAGTTCTTTGAAGC...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCTGGGCAGGATTTCTTaGACCTCCTGGGCAATCATT +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGLGRIS*TSWAII
Trigger: AATGATTGCCCAGGAGGTGCAAGAAATCCTGCCCAG...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAACCAACCTCTCTTACTaGTCTGGGCAGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRTNLSY*SGQDFL
Trigger: CAAGAAATCCTGCCCAGAGCAGTAAGAGAGGTTGGT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGCCTTCTTGGAGAAGATaGACTAACGGCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSPSWRR*TNGSAR
Trigger: TCTAGCAGAGCCGTTAGTGCATCTTCTCCAAGAAGG...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATGGGAGATTTCTCTGTaGCTTTCCAGCCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRWEISL*LSSPLV
Trigger: AACCAAAGGGCTGGAAAGCCACAGAGAAATCTCCCA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACGCCTACCACATCCATaGTACTGTGATCCTAGTACT +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRRLPHP*YCDPST
Trigger: AGTACTAGGATCACAGTACCATGGATGTGGTAGGCG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATGCACTTTCTCTTCTTaGTTGGAGGCAATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRCTFSS*LEAMRL
Trigger: GAGCCTCATTGCCTCCAACCAAGAAGAGAAAGTGCA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGTCATCGGTCTGCAGTaGCAGGCCCACACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAVIGLQ*QAHTRH
Trigger: ATGCCGAGTGTGGGCCTGCCACTGCAGACCGATGAC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATGCCAAGGAACACTATaGCATGGTTGCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRCQGTL*HGCHFR
Trigger: TCTGAAGTGGCAACCATGCCATAGTGTTCCTTGGCA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTGTTACTTTGGTGACCTaGTCAGCCAGTAGGTCAATT +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFVTLVT*SASRSI
Trigger: AATTGACCTACTGGCTGACCAGGTCACCAAAGTAAC...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTTGTGCTTGCTTCACTaGCTGATGACTTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFLCLLH*LMTSNY
Trigger: GTAGTTGGAAGTCATCAGCCAGTGAAGCAAGCACAA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGGATGTATTAGGTGCTaGGGAGGAGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAGCIRC*GGGCGQ
Trigger: CTGCCCACAGCCTCCTCCTCAGCACCTAATACATCC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCTCTTTGCACAGGACTTaGAGAGACTTCTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGSLHRT*RDFFHS
Trigger: GGAATGAAAGAAGTCTCTTCAAGTCCTGTGCAAAGA...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCTGCGGAGGAGAGCATaGGTCGGATGCAGAATAGGG +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGLRRRA*VGCRIG
Trigger: CCCTATTCTGCATCCGACTCATGCTCTCCTCCGCAG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAGGTAGCATGCACCTTTaGCCTGCGGAGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIGSMHL*PAEESM
Trigger: CATGCTCTCCTCCGCAGGTCAAAGGTGCATGCTACC...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCGTCCAACCACCAACATaGAGTATCTCTGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGVQPPT*SISGLD
Trigger: ATCCAGACCAGAGATACTTCATGTTGGTGGTTGGAC...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCGGCGCATCTGTGTTaGTTCCTACTCGACCGTGAC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPPAHLC*FLLDRD
Trigger: GTCACGGTCGAGTAGGAATCAACACAGATGCGCCGG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATACCGGCGCATCTGTGTTaGTTCCTACTCGACCGTGAC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIPAHLC*FLLDRD
Trigger: GTCACGGTCGAGTAGGAATCAACACAGATGCGCCGG...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGGCAATCATTCCTGTTTaGTGGGCAGTGTTTATTCCC +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSAIIPV*WAVFIP
Trigger: GGGAATAAACACTGCCCATCAAACAGGAATGATTGC...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGTTTCCAGAGAGAACTTaGCATTGGTGGGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPFPERT*HWWVCV
Trigger: AACACACACCCACCAATGTCAAGTTCTCTCTGGAAA...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGCACGGAAATGGAACATaGTGTCAGAAAATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSHGNGT*CQKMGL
Trigger: TAGCCCCATTTTCTGACAGCATGTTCCATTTCCGTG...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCTCAGCCATCAAATTGTaGCCAGAAAGATGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGSAIKL*PERWLS
Trigger: ACTCAACCATCTTTCTGGGCACAATTTGATGGCTGA...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCCCGGAGTCCTCCAGTaGCTGCGTGCACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAPGVLQ*LRALSL
Trigger: AAGAGAAAGTGCACGCAGGCACTGGAGGACTCCGGG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCCCGGAGTCCTCCAGTaGCTGCGTGCACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGPGVLQ*LRALSL
Trigger: AAGAGAAAGTGCACGCAGGCACTGGAGGACTCCGGG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTCTTTTTGCTCCTATCTaGTTGGGACTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFLFAPI*LGLFNS
Trigger: GCTATTGAACAGTCCCAAGCAGATAGGAGCAAAAAG...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCACCAACCTCTCTTACTaGTCTGGGCAGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGTNLSY*SGQDFL
Trigger: CAAGAAATCCTGCCCAGAGCAGTAAGAGAGGTTGGT...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTCCTTCTTGGAGAAGATaGACTAACGGCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSPSWRR*TNGSAR
Trigger: TCTAGCAGAGCCGTTAGTGCATCTTCTCCAAGAAGG...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCCTACCACATCCATaGTACTGTGATCCTAGTACT +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGRLPHP*YCDPST
Trigger: AGTACTAGGATCACAGTACCATGGATGTGGTAGGCG...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGGAGCAGCTGTGGGGTaGAGAAAAGGAGCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAGAAVG*RKGAGV
Trigger: GACTCCAGCTCCTTTTCTCCACCCCACAGCTGCTCC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCTGCCAAGGAACACTATaGCATGGTTGCCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGCQGTL*HGCHFR
Trigger: TCTGAAGTGGCAACCATGCCATAGTGTTCCTTGGCA...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACAGACAATAGATTCTaGAACTTGTCCTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSTDNRF*NLSSLP
Trigger: TGGCAGCGAGGACAAGTTCCAGAATCTATTGTCTGT...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGTCTTTGCACAGGACTTaGAGAGACTTCTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSSLHRT*RDFFHS
Trigger: GGAATGAAAGAAGTCTCTTCAAGTCCTGTGCAAAGA...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCCCAGTCAGGGCCGCTaGGTGCATTTCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAPSQGR*VHFLPK
Trigger: TTTTGGCAAGAAATGCACTCAGCGGCCCTGACTGGG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCATGACTTCCAACTACTaGGCCGCTTTAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGMTSNY*AALAGP
Trigger: TGGCCCGGCTAAAGCGGCTCAGTAGTTGGAAGTCAT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATGACTTCCAACTACTaGGCCGCTTTAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPMTSNY*AALAGP
Trigger: TGGCCCGGCTAAAGCGGCTCAGTAGTTGGAAGTCAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATCCTCAGATTGTCTTTaGACAGGACTTGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRSSDCL*TGLEET
Trigger: AGTCTCTTCAAGTCCTGTGCAAAGACAATCTGAGGA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCTGGGAGCTGGCGTTaGAAGGCCCCCAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKASGSWR*KAPKSK
Trigger: CTTTGATTTGGGGGCCTTGCAACGCCAGCTCCCAGA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCATGCACCTTTGACCTaGGGAGGAGAGCATGAGTCG +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPHAPLT*GGEHES
Trigger: CGACTCATGCTCTCCTCCGCAGGTCAAAGGTGCATG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTACTTGTCATCGGTCTaGAGTGGCAGGCCCACACTC +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAYLSSV*SGRPTL
Trigger: GAGTGTGGGCCTGCCACTGCAGACCGATGACAAGTA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTACTTGTCATCGGTCTaGAGTGGCAGGCCCACACTC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGYLSSV*SGRPTL
Trigger: GAGTGTGGGCCTGCCACTGCAGACCGATGACAAGTA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCTTTTTGCTCCTATCTaGTTGGGACTGTTCAATAGC +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPLFAPI*LGLFNS
Trigger: GCTATTGAACAGTCCCAAGCAGATAGGAGCAAAAAG...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCGGCTGTCAGAGGGATaGATGATGGTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKARLSEG*MMVPIT
Trigger: AGTGATGGGGACCATCATGCATCCCTCTGACAGCCG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGGCAGCTACACGGAAATaGAACATGCTGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPAATRK*NMLSEN
Trigger: ATTTTCTGACAGCATGTTCCATTTCCGTGTAGCTGC...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTGTTATAACCAAGGTCTaGAAAACCCAATTAGGACAC +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFVITKV*KTQLGH
Trigger: GTGTCCTAATTGGGTTTTCCAGACCTTGGTTATAAC...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATATGTGGGCCTCAGGGTTaGGTAGCATGCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEICGPQG*VACTFD
Trigger: GTCAAAGGTGCATGCTACCCAACCCTGAGGCCCACA...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCAACCTATCCCCAGATaGGAGGACACGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGQPIPR*EDTDWS
Trigger: GGACCAATCCGTGTCCTCCCATCTGGGGATAGGTTG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGACACGTCGGTCTTaGTCTTTTAAGCTAAGTATA +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSGTRRS*SFKLSI
Trigger: TATACTTAGCTTAAAAGATCAAGACCGACGTGTCCC...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATACAGAGCTGGCTCCTGTaGGCTTGTGATATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIQSWLL*ACDIAW
Trigger: CCAAGCAATATCACAAGCTCACAGGAGCCAGCTCTG...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCGCCCAGAAAGATGGTTaGGTTTTCAAATGTGATTAT +
Preference number: 4 (lower is better)
Translates to: TISHILKSLCLVGRSRHGAQKDG*VFKCDY
Trigger: ATAATCACATTTGAAAACTCAACCATCTTTCTGGGC...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGTACCATTGGCTCCCTaGGCTTCAAAGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPVPLAP*ASKNCC
Trigger: GCAGCAGTTCTTTGAAGCTCAGGGAGCCAATGGTAC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATATTTGAGTGGCAGCTGTaGAAGCCTCCGTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIFEWQL*KPPWIW
Trigger: CCAAATCCACGGAGGCTTTCACAGCTGCCACTCAAA...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAAAGATGACTGGCGTTTaGGTGGCAGCTGTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIKMTGV*VAAVKA
Trigger: GGCTTTCACAGCTGCCACTCAAACGCCAGTCATCTT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCAGTGTTACTTTGGTaGCCTGGTCAGCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPPVLLW*PGQPVG
Trigger: ACCTACTGGCTGACCAGGTCACCAAAGTAACACTGG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGTTGGAAGCTAAAGCCTaGAAAAGTCCTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSLEAKA*KSPSAI
Trigger: TATTGCTGAAGGACTTTTTCAGGCTTTAGCTTCCAA...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTCGTCAAAGCACAAAATaGCATCACAGCAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSRQSTK*HHSNQS
Trigger: ACTCTGATTGCTGTGATGGCATTTTGTGCTTTGACG...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGAGTCCTCCAGTGCCTaGGTGCACTTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPESSSA*VHFLFL
Trigger: CAAGAAGAGAAAGTGCACGCAGGCACTGGAGGACTC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCCTGGACTTCACTGCTaGGACTCCTACTTGTCATCG +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGPGLHC*DSYLSS
Trigger: CGATGACAAGTAGGAGTCGCAGCAGTGAAGTCCAGG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACTGTTTAATAAGCTGTaGCAAGGAACACTATGGCAT +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRLFNKL*QGTLWH
Trigger: ATGCCATAGTGTTCCTTGGCACAGCTTATTAAACAG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGGCACAGTTGCTTCACTaGACCTACATTTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSAQLLH*TYIFHK
Trigger: TTTATGGAAAATGTAGGTGCAGTGAAGCAACTGTGC...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGCTTGGAGGGAGATTTaGGACACGTCGGTCTTGATC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPAWREI*DTSVLI
Trigger: GATCAAGACCGACGTGTCCCAAATCTCCCTCCAAGC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCGCTTGGAGGGAGATTTaGGACACGTCGGTCTTGATC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGAWREI*DTSVLI
Trigger: GATCAAGACCGACGTGTCCCAAATCTCCCTCCAAGC...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCAGGGTGAATTTGCACTaGAAGACTATCAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGRVNLH*KTINGS
Trigger: AGAGCCATTGATAGTCTTCCAGTGCAAATTCACCCT...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCATGCTGTCAGAAAATaGGGCTACAGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAHAVRK*GYREAP
Trigger: TGGAGCCTCCCTGTAGCCCCATTTTCTGACAGCATG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGCAGCTACACGGAAATaGAACATGCTGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSAATRK*NMLSEN
Trigger: ATTTTCTGACAGCATGTTCCATTTCCGTGTAGCTGC...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTGAAGTATCTCTGGTCTaGATTTGGTTTTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFEVSLV*IWFSLF
Trigger: AAAAAGGGAAAACCAAATCCAGACCAGAGATACTTC...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATTTTCCATAAAGATCTaGTCCTTATCCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRFSIKI*SLSTMR
Trigger: CCTCATGGTGGATAAGGACCAGATCTTTATGGAAAA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGCTCCTGTGAGCTTGTaGTATTGCTTGGAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPAPVSL*YCLEGD
Trigger: ATCTCCCTCCAAGCAATATCACAAGCTCACAGGAGC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATATCTGACCATCGCCTCTaGTGGAATTCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEISDHRL*WNSFSS
Trigger: TGAGGAGAAGGAATTCCATCAGAGGCGATGGTCAGA...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCTGACCATCGCCTCTaGTGGAATTCCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKASDHRL*WNSFSS
Trigger: TGAGGAGAAGGAATTCCATCAGAGGCGATGGTCAGA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTAGGCTCCAAATGTGCTaGTATCCCTGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPRLQMC*YPCVIS
Trigger: GGAGATGACACAGGGATATCAGCACATTTGGAGCCT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAGCTTCATCTGCTGGTaGAAAATTAAATCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPSFICW*KIKSFV
Trigger: GACAAAGGATTTAATTTTTCACCAGCAGATGAAGCT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTGCTGTGGTTTCGCTaGAGTGTAATCGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKALLWFR*SVIVPV
Trigger: CACTGGGACGATTACACTTCAGCGAAACCACAGCAA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTGTCAGAGGGATGCATaGTGGTCCCCATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPCQRDA*WSPSLS
Trigger: TGAAAGTGATGGGGACCATCATGCATCCCTCTGACA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCGGTCCTTATCCACCATaGGGAAGTTCTCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGGPYPP*GSSPRS
Trigger: AGACCTTGGAGAACTTCCTCATGGTGGATAAGGACC...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACGCCTGTCTTTTTCCTaGAAAATAAACCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRRLSFS*KINLVV
Trigger: AACAACAAGGTTTATTTTTCAGGAAAAAGACAGGCG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCGCCTGTCTTTTTCCTaGAAAATAAACCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPRLSFS*KINLVV
Trigger: AACAACAAGGTTTATTTTTCAGGAAAAAGACAGGCG...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCACACTATGGCATGGTTaGCACTTCAGAGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKATLWHG*HFRAGE
Trigger: CTCTCCTGCTCTGAAGTGGCAACCATGCCATAGTGT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTCTGTTTAATAAGCTGTaGCAAGGAACACTATGGCAT +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSLFNKL*QGTLWH
Trigger: ATGCCATAGTGTTCCTTGGCACAGCTTATTAAACAG...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAGGAACTTGTCCTCGCTaGCACAATGCATCACTGTCA +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIGTCPR*HNASLS
Trigger: TGACAGTGATGCATTGTGGCAGCGAGGACAAGTTCC...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCTGGGCAGGATTTCTTaGACCTCCTGGGCAATCATT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPLGRIS*TSWAII
Trigger: AATGATTGCCCAGGAGGTGCAAGAAATCCTGCCCAG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGTTAGTTTGCACAGTTaGTTCACTGCACCTACATTT +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSVSLHS*FTAPTF
Trigger: AAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAAC...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCTTTCATTCCCCGGATaGGGCAGCAATAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGLSFPG*GSNKSP
Trigger: AGGAGACTTATTGCTGCCCCATCCGGGGAATGAAAG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCTTTCATTCCCCGGATaGGGCAGCAATAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKALSFPG*GSNKSP
Trigger: AGGAGACTTATTGCTGCCCCATCCGGGGAATGAAAG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCTTTCATTCCCCGGATaGGGCAGCAATAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPLSFPG*GSNKSP
Trigger: AGGAGACTTATTGCTGCCCCATCCGGGGAATGAAAG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAAGAGCAGGAGAGCACTaGTCTGTAGGCATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIRAGEH*SVGILF
Trigger: GAACAGAATGCCTACAGACCAGTGCTCTCCTGCTCT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCAGGAACACTATGGCATaGTTGCCACTTCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKARNTMA*LPLQSR
Trigger: CCTGCTCTGAAGTGGCAACCATGCCATAGTGTTCCT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTAGGAACACTATGGCATaGTTGCCACTTCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPRNTMA*LPLQSR
Trigger: CCTGCTCTGAAGTGGCAACCATGCCATAGTGTTCCT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGGGTTTCAACAAATTTTaGACTTCCCCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPGFNKF*TSPNLD
Trigger: ATCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACC...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTTGCTCCTATCTGCTTaGGACTGTTCAATAGCAATT +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSLLLSA*DCSIAI
Trigger: AATTGCTATTGAACAGTCCCAAGCAGATAGGAGCAA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCATGAACGGCCCTTCTTaGAGAAGATGCACTAACGGC +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAMNGPS*RRCTNG
Trigger: GCCGTTAGTGCATCTTCTCCAAGAAGGGCCGTTCAT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCATGAACGGCCCTTCTTaGAGAAGATGCACTAACGGC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGMNGPS*RRCTNG
Trigger: GCCGTTAGTGCATCTTCTCCAAGAAGGGCCGTTCAT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTTGCCAAAACTGATTTaGTTTTGTCTTCTGACCATC +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSLPKLI*FCLLTI
Trigger: GATGGTCAGAAGACAAAAGCAAATCAGTTTTGGCAA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552032.7
CDS-3UTR GCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGTTTTCTCATATTATTTaGTGTGGTTTCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSFSHII*CGFAEV
Trigger: CACTTCAGCGAAACCACAGCAAATAATATGAGAAAA...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCCATCACTTTCATGTTaGCACAGACAACCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGPSLSC*HRQPGL
Trigger: AAGCCCTGGTTGTCTGTGGCAACATGAAAGTGATGG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAGTGTTTATTCCCATTaGAGATGCAAATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISSTYHITHSQESMFSGPSVYSH*RCKFRF
Trigger: AAACCTGAATTTGCATCTGCAATGGGAATAAACACT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAAGTGTTTATTCCCATTaGAGATGCAAATTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PHTISHILKSLCLVGRSRSVYSH*RCKFRF
Trigger: AAACCTGAATTTGCATCTGCAATGGGAATAAACACT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCTTCTTGGAGAAGATaGACTAACGGCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPPSWRR*TNGSAR
Trigger: TCTAGCAGAGCCGTTAGTGCATCTTCTCCAAGAAGG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGGGAGATTTCTCTGTaGCTTTCCAGCCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAWEISL*LSSPLV
Trigger: AACCAAAGGGCTGGAAAGCCACAGAGAAATCTCCCA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTGGGAGATTTCTCTGTaGCTTTCCAGCCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPWEISL*LSSPLV
Trigger: AACCAAAGGGCTGGAAAGCCACAGAGAAATCTCCCA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTCTCCAGAGTACCATTaGCTCCCTGAGCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPSPEYH*LPELQR
Trigger: TCTTTGAAGCTCAGGGAGCCAATGGTACTCTGGAGA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTCTCCAGAGTACCATTaGCTCCCTGAGCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGSPEYH*LPELQR
Trigger: TCTTTGAAGCTCAGGGAGCCAATGGTACTCTGGAGA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGTCAACAATTCTCATTTaGGCTATTCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: STYHITHSQESMFSGPKSSTILI*AILFSC
Trigger: ACAGCTGAAAAGAATAGCCCAAATGAGAATTGTTGA...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCATTCCTACTCGACCGTaGCAGACAATAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAIPTRP*QTIDSG
Trigger: TCCAGAATCTATTGTCTGTCACGGTCGAGTAGGAAT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGCAATCATTCCTGTTTaGTGGGCAGTGTTTATTCCC +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAAIIPV*WAVFIP
Trigger: GGGAATAAACACTGCCCATCAAACAGGAATGATTGC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATATTTCCAGAGAGAACTTaGCATTGGTGGGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIFPERT*HWWVCV
Trigger: AACACACACCCACCAATGTCAAGTTCTCTCTGGAAA...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTTCCAGAGAGAACTTaGCATTGGTGGGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAFPERT*HWWVCV
Trigger: AACACACACCCACCAATGTCAAGTTCTCTCTGGAAA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCACTGGAGGCTTTGAATaGAATACTGATGATCTATTA +
Preference number: 4 (lower is better)
Translates to: TSPPHTISHILKSLCLVGTGGFE*NTDDLL
Trigger: TAATAGATCATCAGTATTGCATTCAAAGCCTCCAGT...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCACGGAAATGGAACATaGTGTCAGAAAATGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAHGNGT*CQKMGL
Trigger: TAGCCCCATTTTCTGACAGCATGTTCCATTTCCGTG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTTTTCTCATATTATTTaGTGTGGTTTCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PHISSTYHITHSQESMFSFSHII*CGFAEV
Trigger: CACTTCAGCGAAACCACAGCAAATAATATGAGAAAA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCGTTACTTTGGTGACCTaGTCAGCCAGTAGGTCAATT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGVTLVT*SASRSI
Trigger: AATTGACCTACTGGCTGACCAGGTCACCAAAGTAAC...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTACAGACAATAGATTCTaGAACTTGTCCTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPTDNRF*NLSSLP
Trigger: TGGCAGCGAGGACAAGTTCCAGAATCTATTGTCTGT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTTGTGCTTGCTTCACTaGCTGATGACTTCCAACTAC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPLCLLH*LMTSNY
Trigger: GTAGTTGGAAGTCATCAGCCAGTGAAGCAAGCACAA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGGGACACGTCGGTCTTaGTCTTTTAAGCTAAGTATA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAGTRRS*SFKLSI
Trigger: TATACTTAGCTTAAAAGATCAAGACCGACGTGTCCC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTCTTTGCACAGGACTTaGAGAGACTTCTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPSLHRT*RDFFHS
Trigger: GGAATGAAAGAAGTCTCTTCAAGTCCTGTGCAAAGA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTCCTCAGATTGTCTTTaGACAGGACTTGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGSSDCL*TGLEET
Trigger: AGTCTCTTCAAGTCCTGTGCAAAGACAATCTGAGGA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCTCAGATTGTCTTTaGACAGGACTTGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKASSDCL*TGLEET
Trigger: AGTCTCTTCAAGTCCTGTGCAAAGACAATCTGAGGA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCGTCAAAGCACAAAATaGCATCACAGCAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKARQSTK*HHSNQS
Trigger: ACTCTGATTGCTGTGATGGCATTTTGTGCTTTGACG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTCAGCCATCAAATTGTaGCCAGAAAGATGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGSAIKL*PERWLS
Trigger: ACTCAACCATCTTTCTGGGCACAATTTGATGGCTGA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTTGCCAAAACTGATTTaGTTTTGTCTGACCATCGCC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGLPKLI*FCLTIA
Trigger: GGCGATGGTCAGACAAAAGCAAATCAGTTTTGGCAA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547771.6
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCAGGGTGAATTTGCACTaGAAGACTATCAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKARVNLH*KTINGS
Trigger: AGAGCCATTGATAGTCTTCCAGTGCAAATTCACCCT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAAGGGTGAATTTGCACTaGAAGACTATCAATGGCTCT +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIRVNLH*KTINGS
Trigger: AGAGCCATTGATAGTCTTCCAGTGCAAATTCACCCT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGCAGCTACACGGAAATaGAACATGCTGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAAATRK*NMLSEN
Trigger: ATTTTCTGACAGCATGTTCCATTTCCGTGTAGCTGC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTGGAAGCTAAAGCCTaGAAAAGTCCTTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKALEAKA*KSPSAI
Trigger: TATTGCTGAAGGACTTTTTCAGGCTTTAGCTTCCAA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGCACAGTTGCTTCACTaGACCTACATTTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAAQLLH*TYIFHK
Trigger: TTTATGGAAAATGTAGGTGCAGTGAAGCAACTGTGC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAGCACAGTTGCTTCACTaGACCTACATTTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIAQLLH*TYIFHK
Trigger: TTTATGGAAAATGTAGGTGCAGTGAAGCAACTGTGC...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGTTAGTTTGCACAGTTaGTTCACTGCACCTACATTT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAVSLHS*FTAPTF
Trigger: AAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAAC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAGTTAGTTTGCACAGTTaGTTCACTGCACCTACATTT +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIVSLHS*FTAPTF
Trigger: AAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAAC...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAGTTATAACCAAGGTCTaGAAAACCCAATTAGGACAC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIVITKV*KTQLGH
Trigger: GTGTCCTAATTGGGTTTTCCAGACCTTGGTTATAAC...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGTTATAACCAAGGTCTaGAAAACCCAATTAGGACAC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPVITKV*KTQLGH
Trigger: GTGTCCTAATTGGGTTTTCCAGACCTTGGTTATAAC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATATTGCTCCTATCTGCTTaGGACTGTTCAATAGCAATT +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEILLLSA*DCSIAI
Trigger: AATTGCTATTGAACAGTCCCAAGCAGATAGGAGCAA...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCAACATGAAGTATCTCTaGTCTGGATTTGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGNMKYL*SGFGFP
Trigger: GGGAAAACCAAATCCAGACCAGAGATACTTCATGTT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAAACATGAAGTATCTCTaGTCTGGATTTGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEINMKYL*SGFGFP
Trigger: GGGAAAACCAAATCCAGACCAGAGATACTTCATGTT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTTTCCATAAAGATCTaGTCCTTATCCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAFSIKI*SLSTMR
Trigger: CCTCATGGTGGATAAGGACCAGATCTTTATGGAAAA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCATATATTTCCAAGGGTaGATTTGCACTGGAAGACTA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAIYFQG*ICTGRL
Trigger: TAGTCTTCCAGTGCAAATTCACCCTTGGAAATATAT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATATATTTCCAAGGGTaGATTTGCACTGGAAGACTA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPIYFQG*ICTGRL
Trigger: TAGTCTTCCAGTGCAAATTCACCCTTGGAAATATAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR TCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCATATATTTCCAAGGGTaGATTTGCACTGGAAGACTA +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGIYFQG*ICTGRL
Trigger: TAGTCTTCCAGTGCAAATTCACCCTTGGAAATATAT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGCCCAGAAAGATGGTTaGGTTTTCAAATGTGATTAT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPAQKDG*VFKCDY
Trigger: ATAATCACATTTGAAAACTCAACCATCTTTCTGGGC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCAGCTTCATCTGCTGGTaGAAAATTAAATCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGSFICW*KIKSFV
Trigger: GACAAAGGATTTAATTTTTCACCAGCAGATGAAGCT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR TCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCGCCTGTCTTTTTCCTaGAAAATAAACCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPRLSFS*KINLVV
Trigger: AACAACAAGGTTTATTTTTCAGGAAAAAGACAGGCG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTTGCCAAAACTGATTTaGTTTTGTCTTCTGACCATC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPLPKLI*FCLLTI
Trigger: GATGGTCAGAAGACAAAAGCAAATCAGTTTTGGCAA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTATTCCCATTGCAGATaGAAATTCAGGTTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPYSHCR*KFRFVV
Trigger: GACTACAAACCTGAATTTGCATCTGCAATGGGAATA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATATATTCCCATTGCAGATaGAAATTCAGGTTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IEARSPYFELTTSLIPEIYSHCR*KFRFVV
Trigger: GACTACAAACCTGAATTTGCATCTGCAATGGGAATA...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGGTTTCAACAAATTTTaGACTTCCCCAAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPGFNKF*TSPNLD
Trigger: ATCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACC...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGAAGTATCTCTGGTCTaGATTTGGTTTTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAEVSLV*IWFSLF
Trigger: AAAAAGGGAAAACCAAATCCAGACCAGAGATACTTC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR GCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTACTGGAGGCTTTGAATaGAATACTGATGATCTATTA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPTGGFE*NTDDLL
Trigger: TAATAGATCATCAGTATTGCATTCAAAGCCTCCAGT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR GCA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCACTGGAGGCTTTGAATaGAATACTGATGATCTATTA +
Preference number: 4 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGTGGFE*NTDDLL
Trigger: TAATAGATCATCAGTATTGCATTCAAAGCCTCCAGT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTCAACAATTCTCATTTaGGCTATTCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPSTILI*AILFSC
Trigger: ACAGCTGAAAAGAATAGCCCAAATGAGAATTGTTGA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CCA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATGTCTCAAAACTGTTaGAAGCTAAAGCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPMSQNC*KLKPEK
Trigger: TTTTTCAGGCTTTAGCTTCCAACAGTTTTGAGACAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CCA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCATGTCTCAAAACTGTTaGAAGCTAAAGCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SKHFILLINVSKLLEAKAMSQNC*KLKPEK
Trigger: TTTTTCAGGCTTTAGCTTCCAACAGTTTTGAGACAT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS GCA 90 bp AAGCCTCCGTGGATTTGGCAGGAGTCGCCCATTCCAGAGGTGCTCTaGAGCGGGTGCATGGGCGGCATCGCAGGAGCAGCTGTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: KPPWIWQESPIPEVL*SGCMGGIAGAAVGW
Trigger: CCACCCCACAGCTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTGCCAAATCCACGGAGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp TGTGAAAGCCTCCGTGGATTTGGCAGGAGTCGCCCATTCCAGAGGTaGTCTGCAGCGGGTGCATGGGCGGCATCGCAGGAGCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: CESLRGFGRSRPFQR*SAAGAWAASQEQLW
Trigger: CCACAGCTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTGCCAAATCCACGGAGGCTTTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CCA 90 bp TTTGGCAGGAGTCGCCCATTCCAGAGGTGCTCTGCAGCGGGTGCATaGGCGGCATCGCAGGAGCAGCTGTGGGGTGGAGAAAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FGRSRPFQRCSAAGA*AASQEQLWGGEKEL
Trigger: CAGCTCCTTTTCTCCACCCCACAGCTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp TGGATTTGGCAGGAGTCGCCCATTCCAGAGGTGCTCTGCAGCGGGTaGATGGGCGGCATCGCAGGAGCAGCTGTGGGGTGGAGAAAAGGA +
Preference number: 5 (lower is better)
Translates to: WIWQESPIPEVLCSG*MGGIAGAAVGWRKG
Trigger: TCCTTTTCTCCACCCCACAGCTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTGCCAAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp CAGTGGCAGGCCCACACTCGGCATTCCCCGGAGTCCTCCAGTGCCTaGGTGCACTTTCTCTTCTTGGTTGGAGGCAATGAGGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QWQAHTRHSPESSSA*VHFLFLVGGNEAPG
Trigger: CCCTGGAGCCTCATTGCCTCCAACCAAGAAGAGAAAGTGCACGCAGGCACTGGAGGACTCCGGGGAATGCCGAGTGTGGGCCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp GGGTGTCTGGGAGCTGGCGTTGCAAGGCCCCCAAATCAAAGTCATTaGCCAGAAATTCCTCCAACAGACTTGTGTCCAGGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GCLGAGVARPPNQSH*PEIPPTDLCPGLGS
Trigger: AGAACCCAGCCCTGGACACAAGTCTGTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGGGGCCTTGCAACGCCAGCTCCCAGACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CCA 90 bp CACTGGTCTGTAGGCATTCTGTTCTGTCCCTCACTGTCAGGGTCCTaGACTTCACTGCTGCGACTCCTACTTGTCATCGGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: HWSVGILFCPSLSGS*TSLLRLLLVIGLQW
Trigger: CCACTGCAGACCGATGACAAGTAGGAGTCGCAGCAGTGAAGTCCAGGACCCTGACAGTGAGGGACAGAACAGAATGCCTACAGACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 90 bp CAACCTCCTGGATATTCTGCTTTGCCCGGCTGTCAGAGGGATGCATaGTGGTCCCCATCACTTTCATGTTGCCACAGACAACCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: QPPGYSALPGCQRDA*WSPSLSCCHRQPGL
Trigger: AAGCCCTGGTTGTCTGTGGCAACATGAAAGTGATGGGGACCATCATGCATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp GTGTCAACCTCCTGGATATTCTGCTTTGCCCGGCTGTCAGAGGGATaGATGATGGTCCCCATCACTTTCATGTTGCCACAGACAACCAGG +
Preference number: 5 (lower is better)
Translates to: VSTSWIFCFARLSEG*MMVPITFMLPQTTR
Trigger: CCTGGTTGTCTGTGGCAACATGAAAGTGATGGGGACCATCATGCATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAGGAGGTTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAAAAGCCTCCGTGGATTaGGCAGGAGTCGCCCATTCC +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRKASVD*AGVAHS
Trigger: GGAATGGGCGACTCCTGCCAAATCCACGGAGGCTTT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp TTGAACAGTCAGCTAAATCCGGTGCAGCTACACGGAAATGGAACATaGTGTCAGAAAATGGGGCTACAGGGAGGCTCCAAATGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LNSQLNPVQLHGNGT*CQKMGLQGGSKCAD
Trigger: ATCAGCACATTTGGAGCCTCCCTGTAGCCCCATTTTCTGACAGCATGTTCCATTTCCGTGTAGCTGCACCGGATTTAGCTGACTGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGCGTCCCAGTGTTACTTaGGTGACCTGGTCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: ISSTYHITHSQESMFSGPRPSVT*VTWSAS
Trigger: ACTGGCTGACCAGGTCACCAAAGTAACACTGGGACG...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCCATCACTTTCATGTaGCCACAGACAACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TISHILKSLCLVGRSRHGPITFM*PQTTRA
Trigger: AGCCCTGGTTGTCTGTGGCAACATGAAAGTGATGGG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 90 bp CCTCTGATGGAATTCCTTCTCCTCAGATTGTCTTTGCACAGGACTTaGAGAGACTTCTTTCATTCCCCGGATGGGGCAGCAATAAGTCTC +
Preference number: 5 (lower is better)
Translates to: PLMEFLLLRLSLHRT*RDFFHSPDGAAISL
Trigger: GAGACTTATTGCTGCCCCATCCGGGGAATGAAAGAAGTCTCTTCAAGTCCTGTGCAAAGACAATCTGAGGAGAAGGAATTCCATCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS CCA 90 bp ATTGTCTTTGCACAGGACTTGAAGAGACTTCTTTCATTCCCCGGATaGGGCAGCAATAAGTCTCCTGACACGGCAGGATTTCACAGAAAG +
Preference number: 5 (lower is better)
Translates to: IVFAQDLKRLLSFPG*GSNKSPDTAGFHRK
Trigger: CTTTCTGTGAAATCCTGCCGTGTCAGGAGACTTATTGCTGCCCCATCCGGGGAATGAAAGAAGTCTCTTCAAGTCCTGTGCAAAGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTAACACTATGGCATGGTaGCCACTTCAGAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFNTMAW*PLQSRR
Trigger: TCTCCTGCTCTGAAGTGGCAACCATGCCATAGTGTT...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCTGCTTGGAGGGAGATTaGGGACACGTCGGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: TSPPHTISHILKSLCLVGCLEGD*GHVGLD
Trigger: ATCAAGACCGACGTGTCCCAAATCTCCCTCCAAGCA...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAAACACTATGGCATGGTaGCCACTTCAGAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRNTMAW*PLQSRR
Trigger: TCTCCTGCTCTGAAGTGGCAACCATGCCATAGTGTT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCTCTGGGCAGGATTTCTaGCACCTCCTGGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: TSPPHTISHILKSLCLVGSGQDF*HLLGNH
Trigger: ATGATTGCCCAGGAGGTGCAAGAAATCCTGCCCAGA...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCTCCGCACTGGAGGCTTaGAATGCAATACTGATGATC +
Preference number: 5 (lower is better)
Translates to: TISHILKSLCLVGRSRHGSALEA*NAILMI
Trigger: GATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGA...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCTGGCTTTCCAGCCCTTaGGTTCCCCTTTTACTATGG +
Preference number: 5 (lower is better)
Translates to: TSPPHTISHILKSLCLVGWLSSP*VPLLLW
Trigger: CCATAGTAAAAGGGGAACCAAAGGGCTGGAAAGCCA...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTGGCTTTCCAGCCCTTaGGTTCCCCTTTTACTATGG +
Preference number: 5 (lower is better)
Translates to: PHISSTYHITHSQESMFSWLSSP*VPLLLW
Trigger: CCATAGTAAAAGGGGAACCAAAGGGCTGGAAAGCCA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTTCTTCAGCCATCAAATaGTGCCCAGAAAGATGGTTG +
Preference number: 5 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFSSAIK*CPERWL
Trigger: CAACCATCTTTCTGGGCACAATTTGATGGCTGAAGA...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGCAGATAGAACTGGTCTaGGTTAGCAGCATACAGTCC +
Preference number: 5 (lower is better)
Translates to: STYHITHSQESMFSGPKSQIELV*VSSIQS
Trigger: GGACTGTATGCTGCTAACCAAGACCAGTTCTATCTG...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAATAGATTCTGGAACTaGTCCTCGCTGCCACAATGC +
Preference number: 5 (lower is better)
Translates to: ISSTYHITHSQESMFSGPNRFWN*SSLPQC
Trigger: GCATTGTGGCAGCGAGGACAAGTTCCAGAATCTATT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTGGCAATCATTCCTGTTaGATGGGCAGTGTTTATTCC +
Preference number: 5 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFGNHSC*MGSVYS
Trigger: GGAATAAACACTGCCCATCAAACAGGAATGATTGCC...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACCCAAATCAAAGTCATaGCCCAGAAATTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRPKSKS*PRNSSN
Trigger: GTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAAAAGCCTCCGTGGATTaGGCAGGAGTCGCCCATTCC +
Preference number: 5 (lower is better)
Translates to: IEARSPYFELTTSLIPEIKASVD*AGVAHS
Trigger: GGAATGGGCGACTCCTGCCAAATCCACGGAGGCTTT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTAGGTTGTTAGTTAGTTaGCACAGTTGCTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFRLLVS*HSCFTA
Trigger: TGCAGTGAAGCAACTGTGCAAACTAACTAACAACCT...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACTTGCCAAAACTGATTaGCTTTTGTCTGACCATCGC +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRLAKTD*LLSDHR
Trigger: GCGATGGTCAGACAAAAGCAAATCAGTTTTGGCAAG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547771.6
CDS-3UTR CAA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCTCCGCACTGGAGGCTTaGAATGCAATACTGATGATC +
Preference number: 5 (lower is better)
Translates to: TSPPHTISHILKSLCLVGSALEA*NAILMI
Trigger: GATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGA...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTGAGTATTTTTCTTaGGTAAAGTCCCCAAACTTG +
Preference number: 5 (lower is better)
Translates to: TISHILKSLCLVGRSRHGPEYFS*VKSPNL
Trigger: CAAGTTTGGGGACTTTACCAAAGAAAAATACTCAGG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCCTTTTCCTGAGTATTTTTCTTaGGTAAAGTCCCCAAACTTG +
Preference number: 5 (lower is better)
Translates to: SHILKSLCLVGRSRHGPFPEYFS*VKSPNL
Trigger: CAAGTTTGGGGACTTTACCAAAGAAAAATACTCAGG...AAAAGGGCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCTCTTCAGCCATCAAATaGTGCCCAGAAAGATGGTTG +
Preference number: 5 (lower is better)
Translates to: TSPPHTISHILKSLCLVGSSAIK*CPERWL
Trigger: CAACCATCTTTCTGGGCACAATTTGATGGCTGAAGA...GCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTGGACTTCCCCAAACTaGGATGTGAATGGTTATCTG +
Preference number: 5 (lower is better)
Translates to: PHISSTYHITHSQESMFSWTSPN*DVNGYL
Trigger: CAGATAACCATTCACATCCAAGTTTGGGGAAGTCCA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGCGGTTTCAACAAATTTaGGACTTCCCCAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: STYHITHSQESMFSGPKSRFQQI*DFPKLG
Trigger: TCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACCG...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCGTCCCAGTGTTACTTaGGTGACCTGGTCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKARPSVT*VTWSAS
Trigger: ACTGGCTGACCAGGTCACCAAAGTAACACTGGGACG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCTGGATATTCTGCTTaGCCCGGCTGTCAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPPGYSA*PGCQRD
Trigger: ATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAGG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCCTGGATATTCTGCTTaGCCCGGCTGTCAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKAPGYSA*PGCQRD
Trigger: ATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAGG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCCAGTGTTTATTCCCATaGCAGATGCAAATTCAGGTT +
Preference number: 5 (lower is better)
Translates to: TISHILKSLCLVGRSRHGQCLFP*QMQIQV
Trigger: AACCTGAATTTGCATCTGCAATGGGAATAAACACTG...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCTGCTTGGAGGGAGATTaGGGACACGTCGGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGCLEGD*GHVGLD
Trigger: ATCAAGACCGACGTGTCCCAAATCTCCCTCCAAGCA...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGCTTGGAGGGAGATTaGGGACACGTCGGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKACLEGD*GHVGLD
Trigger: ATCAAGACCGACGTGTCCCAAATCTCCCTCCAAGCA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATTTCCAAGGGTGAATTaGCACTGGAAGACTATCAAT +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRFPRVN*HWKTIN
Trigger: ATTGATAGTCTTCCAGTGCAAATTCACCCTTGGAAA...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGATAAGTACTGTCCTTTaGATTCGAAGCCTACGAATG +
Preference number: 5 (lower is better)
Translates to: ISSTYHITHSQESMFSGPISTVL*IRSLRM
Trigger: CATTCGTAGGCTTCGAATCAAAAGGACAGTACTTAT...CGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATAATTCCTCCAACAGACTaGTGTCCAGGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: IEARSPYFELTTSLIPEIIPPTD*CPGLGS
Trigger: AGAACCCAGCCCTGGACACAAGTCTGTTGGAGGAAT...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCATTCCTCCAACAGACTaGTGTCCAGGGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGIPPTD*CPGLGS
Trigger: AGAACCCAGCCCTGGACACAAGTCTGTTGGAGGAAT...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TTTAAATTCAACAGAACTGTTTGCTCCAGGAAATGTTTTCTTCATAGTCATGGCCAAGATGACTGGCGTTaGAGTGGCAGCTGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: FKFNRTVCSRKCFLHSHGQDDWR*SGSCES
Trigger: GCTTTCACAGCTGCCACTCAAACGCCAGTCATCTTG...GCCATGACTATGAAGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTAGTAAAACATTTCTATaGGCTTTAGGCCCATCTCGG +
Preference number: 5 (lower is better)
Translates to: PHISSTYHITHSQESMFSSKTFL*ALGPSR
Trigger: CCGAGATGGGCCTAAAGCCAATAGAAATGTTTTACT...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ATAGAGGCTAGATCTCCTTATTTTGAGCTCACAACTTCCTTAATACCAGAAATACCCATCACTTTCATGTaGCCACAGACAACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: IEARSPYFELTTSLIPEIPITFM*PQTTRA
Trigger: AGCCCTGGTTGTCTGTGGCAACATGAAAGTGATGGG...TATTTCTGGTATTAAGGAAGTTGTGAGCTCAAAATAAGGAGATCTAGCCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp ACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACATGGCTTCAACAATTCTCATTaGGGCTATTCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: TISHILKSLCLVGRSRHGFNNSH*GYSFQL
Trigger: CAGCTGAAAAGAATAGCCCAAATGAGAATTGTTGAA...GCCATGTCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGACAGTGTTTATTCCCATaGCAGATGCAAATTCAGGTT +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRQCLFP*QMQIQV
Trigger: AACCTGAATTTGCATCTGCAATGGGAATAAACACTG...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCTGGGCAGGATTTCTaGCACCTCCTGGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKASGQDF*HLLGNH
Trigger: ATGATTGCCCAGGAGGTGCAAGAAATCCTGCCCAGA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAGAGAGAACTTGACATaGGTGGGTGTGTGTTTATTA +
Preference number: 5 (lower is better)
Translates to: STYHITHSQESMFSGPKSRENLT*VGVCLL
Trigger: TAATAAACACACACCCACCAATGTCAAGTTCTCTCT...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTGGCTTTCCAGCCCTTaGGTTCCCCTTTTACTATGG +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPWLSSP*VPLLLW
Trigger: CCATAGTAAAAGGGGAACCAAAGGGCTGGAAAGCCA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp TCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGATTCTTTCCTCAAGGTaGTTAGTTAGTTTGCACAGT +
Preference number: 5 (lower is better)
Translates to: STYHITHSQESMFSGPKSILSSR*LVSLHS
Trigger: ACTGTGCAAACTAACTAACAACCTTGAGGAAAGAAT...CGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTAGAGAGAACTTGACATaGGTGGGTGTGTGTTTATTA +
Preference number: 5 (lower is better)
Translates to: PHISSTYHITHSQESMFSRENLT*VGVCLL
Trigger: TAATAAACACACACCCACCAATGTCAAGTTCTCTCT...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTGGGCCGAAGTCGAATTCAACAGAACTGTTaGCTCCAGGAAATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PHTISHILKSLCLVGRSRIQQNC*LQEMFS
Trigger: AGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAAT...TCGACTTCGGCCCACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp GGCAATCATTCCTGTTTGATGGGCAGTGTTTATTCCCATTGCAGATaGAAATTCAGGTTTGTAGTCATATTCAACAATTCTCATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GNHSCLMGSVYSHCR*KFRFVVIFNNSHLG
Trigger: GCCCAAATGAGAATTGTTGAATATGACTACAAACCTGAATTTGCATCTGCAATGGGAATAAACACTGCCCATCAAACAGGAATGATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 90 bp CTCCTGGGCAATCATTCCTGTTTGATGGGCAGTGTTTATTCCCATTaGAGATGCAAATTCAGGTTTGTAGTCATATTCAACAATTCTCAT +
Preference number: 5 (lower is better)
Translates to: LLGNHSCLMGSVYSH*RCKFRFVVIFNNSH
Trigger: ATGAGAATTGTTGAATATGACTACAAACCTGAATTTGCATCTGCAATGGGAATAAACACTGCCCATCAAACAGGAATGATTGCCCAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCCAGATAGAACTGGTCTaGGTTAGCAGCATACAGTCC +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKAQIELV*VSSIQS
Trigger: GGACTGTATGCTGCTAACCAAGACCAGTTCTATCTG...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCAATAGATTCTGGAACTaGTCCTCGCTGCCACAATGC +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKANRFWN*SSLPQC
Trigger: GCATTGTGGCAGCGAGGACAAGTTCCAGAATCTATT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp CCCCACATCTCCTCCACATACCATATCACACATTCTCAAGAGTCTATGTTTAGTTTCAACAATTCTCATTaGGGCTATTCTTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PHISSTYHITHSQESMFSFNNSH*GYSFQL
Trigger: CAGCTGAAAAGAATAGCCCAAATGAGAATTGTTGAA...ACTAAACATAGACTCTTGAGAATGTGTGATATGGTATGTGGAGGAGATGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCGCACTGGAGGCTTaGAATGCAATACTGATGATC +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKASALEA*NAILMI
Trigger: GATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS TCA 90 bp GAACAAATTAGGCACAGCGTCGATAGAAGTAAAAGAAGTAATCGGTaGAGAATATCCCAGCAAAATAAGGATCAGTTGAACAGTCAGCTA +
Preference number: 5 (lower is better)
Translates to: EQIRHSVDRSKRSNR*RISQQNKDQLNSQL
Trigger: TAGCTGACTGTTCAACTGATCCTTATTTTGCTGGGATATTCTTCACCGATTACTTCTTTTACTTCTATCGACGCTGTGCCTAATTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS GCA 90 bp AACTCTTCTATTCTTTCCTCAAGGTTGTTAGTTAGTTTGCACAGTTaGTTCACTGCACCTACATTTTCCATAAAGATCTGGTCCTTATCC +
Preference number: 5 (lower is better)
Translates to: NSSILSSRLLVSLHS*FTAPTFSIKIWSLS
Trigger: GGATAAGGACCAGATCTTTATGGAAAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAACTAACAACCTTGAGGAAAGAATAGAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCCCAAATCAAAGTCATaGCCCAGAAATTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPPKSKS*PRNSSN
Trigger: GTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTGGACTTCCCCAAACTaGGATGTGAATGGTTATCTG +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKAWTSPN*DVNGYL
Trigger: CAGATAACCATTCACATCCAAGTTTGGGGAAGTCCA...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCGGCAATCATTCCTGTTaGATGGGCAGTGTTTATTCC +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKAGNHSC*MGSVYS
Trigger: GGAATAAACACTGCCCATCAAACAGGAATGATTGCC...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTCGGTTTCAACAAATTTaGGACTTCCCCAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPRFQQI*DFPKLG
Trigger: TCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACCG...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTTTGCTCCTATCTGCTaGGGACTGTTCAATAGCAAT +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPFAPIC*GLFNSN
Trigger: ATTGCTATTGAACAGTCCCAAGCAGATAGGAGCAAA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTAGGTTGTTAGTTAGTTaGCACAGTTGCTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPRLLVS*HSCFTA
Trigger: TGCAGTGAAGCAACTGTGCAAACTAACTAACAACCT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp AGCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCAGGTTGTTAGTTAGTTaGCACAGTTGCTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: SKHFILLINVSKLLEAKARLLVS*HSCFTA
Trigger: TGCAGTGAAGCAACTGTGCAAACTAACTAACAACCT...GGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTTTTCCAAGGGTGAATTaGCACTGGAAGACTATCAAT +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPFPRVN*HWKTIN
Trigger: ATTGATAGTCTTCCAGTGCAAATTCACCCTTGGAAA...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATAAGTACTGTCCTTTaGATTCGAAGCCTACGAATG +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPISTVL*IRSLRM
Trigger: CATTCGTAGGCTTCGAATCAAAAGGACAGTACTTAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTAGAGAGAACTTGACATaGGTGGGTGTGTGTTTATTA +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPRENLT*VGVCLL
Trigger: TAATAAACACACACCCACCAATGTCAAGTTCTCTCT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS TCA 90 bp AGTGAAGCATATCTTCAGCCATCAAATTGTGCCCAGAAAGATGGTTaGGTTTTCAAATGTGATTATAAAACTGGAAGGATATACAACCAT +
Preference number: 5 (lower is better)
Translates to: SEAYLQPSNCAQKDG*VFKCDYKTGRIYNH
Trigger: ATGGTTGTATATCCTTCCAGTTTTATAATCACATTTGAAAACTCAACCATCTTTCTGGGCACAATTTGATGGCTGAAGATATGCTTCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATTCTTTCCTCAAGGTaGTTAGTTAGTTTGCACAGT +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPILSSR*LVSLHS
Trigger: ACTGTGCAAACTAACTAACAACCTTGAGGAAAGAAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS-3UTR CAA 90 bp GCAAACATTTTATTCTCCTCATTAATGTCTCAAAACTGTTGGAAGCTAAAGCCTATTCAACAGAACTGTTaGCTCCAGGAAATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: ANILFSSLMSQNCWKLKPIQQNC*LQEMFS
Trigger: AGAAAACATTTCCTGGAGCAAACAGTTCTGTTGAAT...AGGCTTTAGCTTCCAACAGTTTTGAGACATTAATGAGGAGAATAAAATGTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp CAGGAGTCGCCCATTCCAGAGGTGCTCTGCAGCGGGTaGATGGGCGGCATCGCAGGAGCAGCTGTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: QESPIPEVLCSG*MGGIAGAAVGW
Trigger: CCACCCCACAGCTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp CTCCGTGGATTTGGCAGGAGTCGCCCATTCCAGAGGTaGTCTGCAGCGGGTGCATGGGCGGCATCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: LRGFGRSRPFQR*SAAGAWAASQE
Trigger: CTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTGCCAAATCCACGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp TGGATTTGGCAGGAGTCGCCCATTCCAGAGGTGCTCTaGAGCGGGTGCATGGGCGGCATCGCAGGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: WIWQESPIPEVL*SGCMGGIAGAA
Trigger: AGCTGCTCCTGCGATGCCGCCCATGCACCCGCTGCAGAGCACCTCTGGAATGGGCGACTCCTGCCAAATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp GCAGGCCCACACTCGGCATTCCCCGGAGTCCTCCAGTaGCTGCGTGCACTTTCTCTTCTTGGTTGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: AGPHSAFPGVLQ*LRALSLLGWRQ
Trigger: TTGCCTCCAACCAAGAAGAGAAAGTGCACGCAGGCACTGGAGGACTCCGGGGAATGCCGAGTGTGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp TGGGTAGCATGCACCTTTGACCTGCGGAGGAGAGCATaGGTCGGATGCAGAATAGGGCGGGGTGTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: WVACTFDLRRRA*VGCRIGRGVWE
Trigger: CTCCCAGACACCCCGCCCTATTCTGCATCCGACTCATGCTCTCCTCCGCAGGTCAAAGGTGCATGCTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp GCCCACACTCGGCATTCCCCGGAGTCCTCCAGTGCCTaGGTGCACTTTCTCTTCTTGGTTGGAGGCAATGAG +
Preference number: 6 (lower is better)
Translates to: AHTRHSPESSSA*VHFLFLVGGNE
Trigger: CTCATTGCCTCCAACCAAGAAGAGAAAGTGCACGCAGGCACTGGAGGACTCCGGGGAATGCCGAGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp TCTGTCCCTCACTGTCAGGGTCCTGGACTTCACTGCTaGGACTCCTACTTGTCATCGGTCTGCAGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SVPHCQGPGLHC*DSYLSSVCSGR
Trigger: CCTGCCACTGCAGACCGATGACAAGTAGGAGTCGCAGCAGTGAAGTCCAGGACCCTGACAGTGAGGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 90 bp GGGGTGTCTGGGAGCTGGCGTTGCAAGGCCCCCAAATCAAAGTCATaGCCCAGAAATTCCTCCAACAGACTTGTGTCCAGGGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: GVSGSWRCKAPKSKS*PRNSSNRLVSRAGF
Trigger: GAACCCAGCCCTGGACACAAGTCTGTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGGGGCCTTGCAACGCCAGCTCCCAGACACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CCA 72 bp GCCCAGAAATTCCTCCAACAGACTTGTGTCCAGGGCTaGGTTCTCCAGAGTACCATTGGCTCCCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: AQKFLQQTCVQG*VLQSTIGSLSF
Trigger: GAAGCTCAGGGAGCCAATGGTACTCTGGAGAACCCAGCCCTGGACACAAGTCTGTTGGAGGAATTTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp TCAGAGGGATGCATGATGGTCCCCATCACTTTCATGTaGCCACAGACAACCAGGGCTTCGTCCGGCGCATCT +
Preference number: 6 (lower is better)
Translates to: SEGCMMVPITFM*PQTTRASSGAS
Trigger: AGATGCGCCGGACGAAGCCCTGGTTGTCTGTGGCAACATGAAAGTGATGGGGACCATCATGCATCCCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp GGAGCTGGCGTTGCAAGGCCCCCAAATCAAAGTCATTaGCCAGAAATTCCTCCAACAGACTTGTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GAGVARPPNQSH*PEIPPTDLCPG
Trigger: CCCTGGACACAAGTCTGTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGGGGCCTTGCAACGCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CCA 72 bp GTAGGCATTCTGTTCTGTCCCTCACTGTCAGGGTCCTaGACTTCACTGCTGCGACTCCTACTTGTCATCGGT +
Preference number: 6 (lower is better)
Translates to: VGILFCPSLSGS*TSLLRLLLVIG
Trigger: ACCGATGACAAGTAGGAGTCGCAGCAGTGAAGTCCAGGACCCTGACAGTGAGGGACAGAACAGAATGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp GGGAGCTGGCGTTGCAAGGCCCCCAAATCAAAGTCATaGCCCAGAAATTCCTCCAACAGACTTGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GSWRCKAPKSKS*PRNSSNRLVSR
Trigger: CCTGGACACAAGTCTGTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGGGGCCTTGCAACGCCAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 90 bp AGGCCCCCAAATCAAAGTCATTGCCCAGAAATTCCTCCAACAGACTaGTGTCCAGGGCTGGGTTCTCCAGAGTACCATTGGCTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: RPPNQSHCPEIPPTD*CPGLGSPEYHWLPE
Trigger: CTCAGGGAGCCAATGGTACTCTGGAGAACCCAGCCCTGGACACAAGTCTGTTGGAGGAATTTCTGGGCAATGACTTTGATTTGGGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp TCGTCCGGCGCATCTGTGTTGATTCCTACTCGACCGTaGCAGACAATAGATTCTGGAACTTGTCCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSGASVLIPTRP*QTIDSGTCPRC
Trigger: GCAGCGAGGACAAGTTCCAGAATCTATTGTCTGTCACGGTCGAGTAGGAATCAACACAGATGCGCCGGACGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp TCCTGGATATTCTGCTTTGCCCGGCTGTCAGAGGGATaGATGATGGTCCCCATCACTTTCATGTTGCCACAG +
Preference number: 6 (lower is better)
Translates to: SWIFCFARLSEG*MMVPITFMLPQ
Trigger: CTGTGGCAACATGAAAGTGATGGGGACCATCATGCATCCCTCTGACAGCCGGGCAAAGCAGAATATCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp GGATATTCTGCTTTGCCCGGCTGTCAGAGGGATGCATaGTGGTCCCCATCACTTTCATGTTGCCACAGACAA +
Preference number: 6 (lower is better)
Translates to: GYSALPGCQRDA*WSPSLSCCHRQ
Trigger: TTGTCTGTGGCAACATGAAAGTGATGGGGACCATCATGCATCCCTCTGACAGCCGGGCAAAGCAGAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp TTGTGCTTGCTTCACTGGCTGATGACTTCCAACTACTaGGCCGCTTTAGCCGGGCCAGCTTTCTGTTCCATA +
Preference number: 6 (lower is better)
Translates to: LCLLHWLMTSNY*AALAGPAFCSI
Trigger: TATGGAACAGAAAGCTGGCCCGGCTAAAGCGGCTCAGTAGTTGGAAGTCATCAGCCAGTGAAGCAAGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS GCA 72 bp CAGCTAAATCCGGTGCAGCTACACGGAAATGGAACATaGTGTCAGAAAATGGGGCTACAGGGAGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: QLNPVQLHGNGT*CQKMGLQGGSK
Trigger: TTTGGAGCCTCCCTGTAGCCCCATTTTCTGACAGCATGTTCCATTTCCGTGTAGCTGCACCGGATTTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS CCA 72 bp GCACAGGACTTGAAGAGACTTCTTTCATTCCCCGGATaGGGCAGCAATAAGTCTCCTGACACGGCAGGATTT +
Preference number: 6 (lower is better)
Translates to: AQDLKRLLSFPG*GSNKSPDTAGF
Trigger: AAATCCTGCCGTGTCAGGAGACTTATTGCTGCCCCATCCGGGGAATGAAAGAAGTCTCTTCAAGTCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS CCA 72 bp GAACAGTCAGCTAAATCCGGTGCAGCTACACGGAAATaGAACATGCTGTCAGAAAATGGGGCTACAGGGAGG +
Preference number: 6 (lower is better)
Translates to: EQSAKSGAATRK*NMLSENGATGR
Trigger: CCTCCCTGTAGCCCCATTTTCTGACAGCATGTTCCATTTCCGTGTAGCTGCACCGGATTTAGCTGACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS GCA 72 bp TTTAATAAGCTGTGCCAAGGAACACTATGGCATGGTTaGCACTTCAGAGCAGGAGAGCACTGGTCTGTAGGC +
Preference number: 6 (lower is better)
Translates to: FNKLCQGTLWHG*HFRAGEHWSVG
Trigger: GCCTACAGACCAGTGCTCTCCTGCTCTGAAGTGGCAACCATGCCATAGTGTTCCTTGGCACAGCTTATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CCA 72 bp GTTGATTCCTACTCGACCGTGACAGACAATAGATTCTaGAACTTGTCCTCGCTGCCACAATGCATCACTGTC +
Preference number: 6 (lower is better)
Translates to: VDSYSTVTDNRF*NLSSLPQCITV
Trigger: GACAGTGATGCATTGTGGCAGCGAGGACAAGTTCCAGAATCTATTGTCTGTCACGGTCGAGTAGGAATCAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp TCCTACTCGACCGTGACAGACAATAGATTCTGGAACTaGTCCTCGCTGCCACAATGCATCACTGTCATTTTC +
Preference number: 6 (lower is better)
Translates to: SYSTVTDNRFWN*SSLPQCITVIF
Trigger: GAAAATGACAGTGATGCATTGTGGCAGCGAGGACAAGTTCCAGAATCTATTGTCTGTCACGGTCGAGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp TTGTATCAATCCAGTCACTCTCCCAGTCAGGGCCGCTaGGTGCATTTCTTGCCAAAACTGATTTGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: LYQSSHSPSQGR*VHFLPKLICFC
Trigger: ACAAAAGCAAATCAGTTTTGGCAAGAAATGCACTCAGCGGCCCTGACTGGGAGAGTGACTGGATTGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299350.5
ENST00000535034.5
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS CAA 72 bp TTCAGAGATGTGGGCAGACAACAGATAGAACTGGTCTaGGTTAGCAGCATACAGTCCAACCACCAACATGAA +
Preference number: 6 (lower is better)
Translates to: FRDVGRQQIELV*VSSIQSNHQHE
Trigger: TTCATGTTGGTGGTTGGACTGTATGCTGCTAACCAAGACCAGTTCTATCTGTTGTCTGCCCACATCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 90 bp AATGATCCTTTCAGAGATGTGGGCAGACAACAGATAGAACTGGTCTaGGTTAGCAGCATACAGTCCAACCACCAACATGAAGTATCTCTG +
Preference number: 6 (lower is better)
Translates to: NDPFRDVGRQQIELV*VSSIQSNHQHEVSL
Trigger: CAGAGATACTTCATGTTGGTGGTTGGACTGTATGCTGCTAACCAAGACCAGTTCTATCTGTTGTCTGCCCACATCTCTGAAAGGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp ATATTGCTTGGAGGGAGATTTGGGACACGTCGGTCTTaGTCTTTTAAGCAAAATGCCATCACAGCAATCAGA +
Preference number: 6 (lower is better)
Translates to: ILLGGRFGTRRS*SFKQNAITAIR
Trigger: TCTGATTGCTGTGATGGCATTTTGCTTAAAAGATCAAGACCGACGTGTCCCAAATCTCCCTCCAAGCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547771.6
CDS CCA 72 bp CTGAAGTGTAATCGTCCCAGTGTTACTTTGGTGACCTaGTCAGCCAGTAGGTCAATTTTAACAGGATTGAAA +
Preference number: 6 (lower is better)
Translates to: LKCNRPSVTLVT*SASRSILTGLK
Trigger: TTTCAATCCTGTTAAAATTGACCTACTGGCTGACCAGGTCACCAAAGTAACACTGGGACGATTACACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp GACTATCAATGGCTCTGTTGTGCCGCACTGGAGGCTTaGAATGCAATACTGATGATCTATTATTTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: DYQWLCCAALEA*NAILMIYYLLD
Trigger: ATCCAGCAAATAATAGATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGCACAACAGAGCCATTGATAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299350.5
ENST00000535034.5
CDS CAA 72 bp CTATTGGCTTTAGGCCCATCTCGGTTTCAACAAATTTaGGACTTCCCCAAACTTGGATGTGAATGGTTATCT +
Preference number: 6 (lower is better)
Translates to: LLALGPSRFQQI*DFPKLGCEWLS
Trigger: AGATAACCATTCACATCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACCGAGATGGGCCTAAAGCCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 90 bp CCTCCTGGGCAATCATTCCTGTTTGATGGGCAGTGTTTATTCCCATaGCAGATGCAAATTCAGGTTTGTAGTCATATTCAACAATTCTCA +
Preference number: 6 (lower is better)
Translates to: PPGQSFLFDGQCLFP*QMQIQVCSHIQQFS
Trigger: TGAGAATTGTTGAATATGACTACAAACCTGAATTTGCATCTGCAATGGGAATAAACACTGCCCATCAAACAGGAATGATTGCCCAGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS TCA 72 bp CTCCTATCTGCTTGGGACTGTTCAATAGCAATTATTTaGTTGGTAGCTTCCACCTTAGTGCCAAAAACTTTC +
Preference number: 6 (lower is better)
Translates to: LLSAWDCSIAII*LVASTLVPKTF
Trigger: GAAAGTTTTTGGCACTAAGGTGGAAGCTACCAATCAAATAATTGCTATTGAACAGTCCCAAGCAGATAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp ATTCTTTCCTCAAGGTTGTTAGTTAGTTTGCACAGTTaGTTCACTGCACCTACATTTTCCATAAAGATCTGG +
Preference number: 6 (lower is better)
Translates to: ILSSRLLVSLHS*FTAPTFSIKIW
Trigger: CCAGATCTTTATGGAAAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAACTAACAACCTTGAGGAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp ACGGTTATCAGACCTCAGGAAATAAGTACTGTCCTTTaGATTCGAAGCCTACGAATGCTCTTGAAAAATCTT +
Preference number: 6 (lower is better)
Translates to: TVIRPQEISTVL*IRSLRMLLKNL
Trigger: AAGATTTTTCAAGAGCATTCGTAGGCTTCGAATCAAAAGGACAGTACTTATTTCCTGAGGTCTGATAACCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 90 bp TGTGCCGCACTGGAGGCTTTGAATGCAATACTGATGATCTATTATTaGCTGGATTTCCATAATCTGAATAGAACTGATGGTTGTATCAAT +
Preference number: 6 (lower is better)
Translates to: CAALEALNAILMIYY*LDFHNLNRTDGCIN
Trigger: ATTGATACAACCATCAGTTCTATTCAGATTATGGAAATCCAGCAAATAATAGATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299350.5
ENST00000535034.5
CDS CAA 90 bp AAAACATTTCTATTGGCTTTAGGCCCATCTCGGTTTCAACAAATTTaGGACTTCCCCAAACTTGGATGTGAATGGTTATCTGGAAATGAT +
Preference number: 6 (lower is better)
Translates to: KTFLLALGPSRFQQI*DFPKLGCEWLSGND
Trigger: ATCATTTCCAGATAACCATTCACATCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACCGAGATGGGCCTAAAGCCAATAGAAATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS GCA 72 bp TCCTGTTTGATGGGCAGTGTTTATTCCCATTGCAGATaGAAATTCAGGTTTGTAGTCATATTCAACAATTCT +
Preference number: 6 (lower is better)
Translates to: SCLMGSVYSHCR*KFRFVVIFNNS
Trigger: AGAATTGTTGAATATGACTACAAACCTGAATTTGCATCTGCAATGGGAATAAACACTGCCCATCAAACAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp CATCTCGGTTTCAACAAATTTTGGACTTCCCCAAACTaGGATGTGAATGGTTATCTGGAAATGATTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HLGFNKFWTSPN*DVNGYLEMILL
Trigger: AAGAAGAATCATTTCCAGATAACCATTCACATCCAAGTTTGGGGAAGTCCAAAATTTGTTGAAACCGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp AACTCTTCTATTCTTTCCTCAAGGTTGTTAGTTAGTTaGCACAGTTGCTTCACTGCACCTACATTTTCCATA +
Preference number: 6 (lower is better)
Translates to: NSSILSSRLLVS*HSCFTAPTFSI
Trigger: TATGGAAAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAACTAACAACCTTGAGGAAAGAATAGAAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS CAA 90 bp CATATTTCTAACTCTTCTATTCTTTCCTCAAGGTTGTTAGTTAGTTaGCACAGTTGCTTCACTGCACCTACATTTTCCATAAAGATCTGG +
Preference number: 6 (lower is better)
Translates to: HISNSSILSSRLLVS*HSCFTAPTFSIKIW
Trigger: CCAGATCTTTATGGAAAATGTAGGTGCAGTGAAGCAACTGTGCAAACTAACTAACAACCTTGAGGAAAGAATAGAAGAGTTAGAAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 90 bp AGATCCGCACTGGAGGCTTTGAATGCAATACTGATGATCTATTATTaGCTGGATTTCCATAATCTGAATAGAACTGATGGTTGTATCAAT +
Preference number: 6 (lower is better)
Translates to: RSALEALNAILMIYY*LDFHNLNRTDGCIN
Trigger: ATTGATACAACCATCAGTTCTATTCAGATTATGGAAATCCAGCAAATAATAGATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7
CDS CAA 72 bp TTTAACAGGATTGAAAATCTTTTTGCTCCTATCTGCTaGGGACTGTTCAATAGCAATTATTTGATTGGTAGC +
Preference number: 6 (lower is better)
Translates to: FNRIENLFAPIC*GLFNSNYLIGS
Trigger: GCTACCAATCAAATAATTGCTATTGAACAGTCCCAAGCAGATAGGAGCAAAAAGATTTTCAATCCTGTTAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000547771.6
ENST00000552032.7
CDS CAA 72 bp ATTGTAATTATAATTTCCAGATCCGCACTGGAGGCTTaGAATGCAATACTGATGATCTATTATTTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: IVIIISRSALEA*NAILMIYYLLD
Trigger: ATCCAGCAAATAATAGATCATCAGTATTGCATTCAAAGCCTCCAGTGCGGATCTGGAAATTATAATTACAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547771.6
ENST00000548892.5
ENST00000552032.7