RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYRF (Homo sapiens)

Ensembl gene IDs: ENSG00000124920

Ensembl transcript IDs: ENST00000265460.9, ENST00000278836.10, ENST00000389602.4, ENST00000536352.5, ENST00000537318.5, ENST00000537766.1, ENST00000539361.1, ENST00000546247.1, ENST00000675319.1, ENST00000675345.1, ENST00000675792.1

Found 1473 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGAGGAGCAGAGACTCTCCGGCTGTCCTCAGACTCGGCTGTTCTaGGGCTCTGCGGGAGATTCTCCCTGGCTCCCCTCCTGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: EEEQRLSGCPQTRLF*GSAGDSPWLPSCLP
Trigger: TGGGAGGCAGGAGGGGAGCCAGGGAGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTGAGGACAGCCGGAGAGTCTCTGCTCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR CCA 90 bp GGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCTCTGAACTGCAGTTGGCCTGACCCA +
Preference number: 1 (lower is better)
Translates to: GQLSHTGGRSGSGSL*LAGREPLNCSWPDP
Trigger: TGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCCACTTCTACCGCCTGTGTGACTGAGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR TCA 90 bp CCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAG +
Preference number: 1 (lower is better)
Translates to: PLCREGRPAGTATPV*RLPVSPVSGRASEQ
Trigger: CTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 90 bp AGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCC +
Preference number: 1 (lower is better)
Translates to: RKAQEVSGSQVPSVP*GATSWNSNSSVKTS
Trigger: GGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp TCCTGGATATTCCTGGTTCAAGGCTCTAGGGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCCTGTGAAGGGCTGAGGGTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: SWIFLVQGSRAYLAH*PLLVQACEGLRVAS
Trigger: TGAAGCCACCCTCAGCCCTTCACAGGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGCCTTGAACCAGGAATATCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp AGGAACAAACGCCAAAGGAGAGAGAAGAAGGGAGGGATGACCTGCTaGACCCCAGGGCAGGGACAGGGCCAAGACACTCACACCATTGCC +
Preference number: 1 (lower is better)
Translates to: RNKRQRREKKGGMTC*TPGQGQGQDTHTIA
Trigger: GGCAATGGTGTGAGTGTCTTGGCCCTGTCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTTCTTCTCTCTCCTTTGGCGTTTGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp CACCCGGAAGTGGTAGGTGAATTCACGGAAGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCCCTGGAGAGAAGGGAGAGAGGGGTC +
Preference number: 1 (lower is better)
Translates to: HPEVVGEFTEGQDGY*PPVRGALERRERGV
Trigger: GACCCCTCTCTCCCTTCTCTCCAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACCTACCACTTCCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675792.1
3UTR TCA 90 bp CTTACCTGGCCCACTGGCCCCTACTGGTTCAGGCCTGTGAAGGGCTaGGGGTGGCTTCACCAGGCACTGAGTAGACTTAAGGCACAAAGT +
Preference number: 1 (lower is better)
Translates to: LTWPTGPYWFRPVKG*GWLHQALSRLKAQS
Trigger: ACTTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCCACCCTCAGCCCTTCACAGGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 90 bp GCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTaGAGCCCTTTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTT +
Preference number: 1 (lower is better)
Translates to: AGQLAASSRWPTYLP*SPFTTGLRQLWSKV
Trigger: AACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 90 bp ATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCTGCTTCCCTCACTaGCCACCTCAGAGTCAGAGTTGGCACATGACAAATACCAAGCTC +
Preference number: 1 (lower is better)
Translates to: ISGTGSKQARGCFPH*PPQSQSWHMTNTKL
Trigger: GAGCTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR GCA 90 bp GAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCTaGTTCCCTCACTGCCCACCTCAGAGTCAGAGTTGGCACATGACA +
Preference number: 1 (lower is better)
Translates to: EETNISGTGSKQARG*FPHCPPQSQSWHMT
Trigger: TGTCATGTGCCAACTCTGACTCTGAGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR CCA 90 bp CTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGTGTAACACCATTGCATCCAGTGTTG +
Preference number: 1 (lower is better)
Translates to: LPVSPVSGRASEQQS*PAAGSSVTPLHPVL
Trigger: CAACACTGGATGCAATGGTGTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 90 bp CTCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAA +
Preference number: 1 (lower is better)
Translates to: LPFKAENEWWDRGKA*FPKRWQHTTGQGQQ
Trigger: TTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 90 bp CAGGGAGAAGAACTGGGAGTTAACTGGGAAGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATT +
Preference number: 1 (lower is better)
Translates to: QGEELGVNWEVGGAL*TRRLLRVHGMGRRI
Trigger: AATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTTAACTCCCAGTTCTTCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp CAGGCCCGGGGCTGCTTCCCTCACTGCCCACCTCAGAGTCAGAGTTaGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTA +
Preference number: 1 (lower is better)
Translates to: QARGCFPHCPPQSQS*HMTNTKLREKNWEL
Trigger: TAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR TCA 90 bp CAGTTAAGGACTGAGGGCCCGCAGTCCAAGAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTATTACATGGAGTGGGGCTCGGCAGT +
Preference number: 1 (lower is better)
Translates to: QLRTEGPQSKNMNPH*GSPGILLHGVGLGS
Trigger: ACTGCCGAGCCCCACTCCATGTAATAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCGGGCCCTCAGTCCTTAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 90 bp CCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: PPAKTRLLLEGFLLL*SERMMWSLITVSSR
Trigger: TCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 90 bp TGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTA +
Preference number: 1 (lower is better)
Translates to: CTRRLLRVHGMGRRI*TGRPYVQLEARGRL
Trigger: TAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp TACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTTACCTGGCCCACTGGCCCCTACTGG +
Preference number: 1 (lower is better)
Translates to: YHLGAQREFPLPGYS*FKALGLTWPTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp GAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTT +
Preference number: 1 (lower is better)
Translates to: ENEWWDRGKACFPKR*QHTTGQGQQFPFPF
Trigger: AAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 90 bp TCACTGATCACTGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: SLITVSSRRSQERRQ*SCNTIWGLKGNFLF
Trigger: GAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACAGTGATCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp GAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGCTCTAGGGCTTACCTGGCCCACTGG +
Preference number: 1 (lower is better)
Translates to: EAAIPSGGSKGISSS*IFLVQGSRAYLAHW
Trigger: CCAGTGGGCCAGGTAAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 90 bp AAAAGCTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTaGGGGATTCCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACT +
Preference number: 1 (lower is better)
Translates to: KSYLHLPTSQDQAAA*GIPAPLLRENDVVT
Trigger: AGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp ACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATaGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTG +
Preference number: 1 (lower is better)
Translates to: TTGQGQQFPFPFLDP*QTWLNEYYTPSMSL
Trigger: CAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 90 bp GCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCTAAATaGATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAATG +
Preference number: 1 (lower is better)
Translates to: AIPFPISGPMADMAK*ILHSFHEPGCSLGM
Trigger: CATTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp CAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATaGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCC +
Preference number: 1 (lower is better)
Translates to: QGQQFPFPFLDPWQT*LNEYYTPSMSLDVA
Trigger: GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 90 bp TGGGAGGGAGAACAAAGTCATCATAAGGAAGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATTGG +
Preference number: 1 (lower is better)
Translates to: WEGEQSHHKEGSAPA*FGNRKIPMSTEPNW
Trigger: CCAATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGAGCCTTCCTTATGATGACTTTGTTCTCCCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 90 bp CATTTAGTAATTACTTCATTAATAACAGCAAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTC +
Preference number: 1 (lower is better)
Translates to: HLVITSLITAKAICI*PPAKTRLLLEGFLL
Trigger: GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTTATTAATGAAGTAATTACTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCTGGGCGAGAGCCTCTaGACTGCAGTTGGCCTGACC +
Preference number: 2 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWLGESL*TAVGLT
Trigger: GGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGCCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCAAGGGAGGGATGACCTaGTGGACCCCAGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFKGGMT*WTPGQG
Trigger: TCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGTCCCTGGTGTGGTGCTaGCTCAGGAGGGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRSLVWC*LRRAAQ
Trigger: CTGAGCTGCCCTCCTGAGGCAGCACCACACCAGGGA...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 2 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQDRGKA*FPKRWQ
Trigger: CTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGGTTATTGGCCACCGGTaGGAGGTGCCCTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWVIGHR*EVPWRE
Trigger: TTCTCTCCAGGGCACCTCTCACCGGTGGCCAATAAC...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCACTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 2 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGCCTTTGACCTCAGGCTaGACAGCACCACAGACACGG +
Preference number: 2 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQPLTSG*TAPQTR
Trigger: CCGTGTCTGTGGTGCTGTGCAGCCTGAGGTCAAAGG...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: SRGRSMHTQASKGARYGQAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 2 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 2 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 2 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 2 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 2 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: SRGRSMHTQASKGARYGQTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAACTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 2 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 2 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCAGGGGGAGAGCCGTCTaGCCTCCATTGACTCATGGG +
Preference number: 2 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSRGRAV*PPLTHG
Trigger: CCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCT...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 2 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGCTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: SRGRSMHTQASKGARYGQLGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: SRGRSMHTQASKGARYGQAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: SESEPCLCKCHTPALAHSPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 2 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGTCAGGACAGACTGCTaGCCTTATCCCAACCAGCAT +
Preference number: 2 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFVRTDC*PYPNQH
Trigger: ATGCTGGTTGGGATAAGGGCAGCAGTCTGTCCTGAC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 2 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 2 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: FTSEETNISGTGSKQARGVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR TCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: RICTGRPYVQLEARGRLAVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 2 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 2 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GTGGTGCTGCCTCAGGAGGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAGTGACATGGTTCCTCCTTTaGCCTCAGGCTGCACAGCAC +
Preference number: 2 (lower is better)
Translates to: VVLPQEGSSVTQAVEVEVTWFLL*PQAAQH
Trigger: GTGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGT...CACTTCCACTTCTACCGCCTGTGTGACTGAGCTGCCCTCCTGAGGCAGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR GCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCAGGGGGAGAGCCGTCTaGCCTCCATTGACTCATGGG +
Preference number: 2 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPRGRAV*PPLTHG
Trigger: CCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCT...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 2 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SRGRSMHTQASKGARYGQPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 2 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCCACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 2 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR CAA 90 bp GCAGGCCCGGGGCTGCTTCCCTCACTGCCCACCTCAGAGTCAGAGTaGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTT +
Preference number: 2 (lower is better)
Translates to: AGPGLLPSLPTSESE*AHDKYQAQGEELGV
Trigger: AACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SMHTQASKGARYGQEDLHIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGACCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGTTATTGGCCACCGGTaGGAGGTGCCCTGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: PAPLLRENDVVTDHCELQVIGHR*EVPWVS
Trigger: GGACACCCAGGGCACCTCTCACCGGTGGCCAATAAC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 2 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGAGGGGGAGAGCCGTCTaGCCTCCATTGACTCATGGG +
Preference number: 2 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRRGRAV*PPLTHG
Trigger: CCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCT...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: SMHTQASKGARYGQEDLHDRGKA*FPKRWQ
Trigger: CTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTC...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKRHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: PAPLLRENDVVTDHCELQGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 2 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCACATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 2 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 2 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 2 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGSCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 2 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGAGGAATCCTATTACATaGAGTGGGGCTCGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQRNPIT*SGARQF
Trigger: AAACTGCCGAGCCCCACTCCATGTAATAGGATTCCT...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCC +
Preference number: 2 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQGQDGY*PPVRGA
Trigger: GGCACCTCTCACCGGTGGCCAATAACCATCCTGTCC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAACACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 2 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCCCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 2 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: RICTGRPYVQLEARGRLAIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 2 (lower is better)
Translates to: SESEPCLCKCHTPALAHSQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: RICTGRPYVQLEARGRLATAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAACCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SHSKLRMSGGTGARPASQPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATGCCACCGGTGAGAGGTaGCCTGGGTGTCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYATGER*PGCPGG
Trigger: CCCACCAGGACACCCAGGGCACCTCTCACCGGTGGC...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR GCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGCGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 2 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SESEPCLCKCHTPALAHSGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTTCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: SRGRSMHTQASKGARYGQSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 2 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCACTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPLGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAAACCCAGGGTCTTGGTaGTTGGGAGTGGGATGGGTG +
Preference number: 2 (lower is better)
Translates to: SHSKLRMSGGTGARPASQNPGSW*LGVGWV
Trigger: CACCCATCCCACTCCCAACCACCAAGACCCTGGGTT...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAACCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGG +
Preference number: 2 (lower is better)
Translates to: SHSKLRMSGGTGARPASQPNPGS*WLGVGW
Trigger: CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGG...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAACCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: SHSKLRMSGGTGARPASQPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 2 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 2 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCCGCAGTCCAAGAACATaGACCCCCATTGAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPARSPRT*TPIEEA
Trigger: GGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCG...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACACTTTGGTCCAAGGTTaGCCCCCTCAAGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: SMHTQASKGARYGQEDLHTLVQG*PPQAAW
Trigger: CCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGT...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCCAGACTCGGCTGTTCTaGGGCTCTGCGGGAGATTCT +
Preference number: 2 (lower is better)
Translates to: FTSEETNISGTGSKQARGQTRLF*GSAGDS
Trigger: AGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTG...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACGGAGCAAGCTATCCCTaGTATTCCTGCATCCCCCTG +
Preference number: 2 (lower is better)
Translates to: SMHTQASKGARYGQEDLHGASYP*YSCIPL
Trigger: CAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCC...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCACGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCGGTGTGGAGACTCTGTaGAAGGCTCCCCTCCTCACA +
Preference number: 2 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISGVETL*KAPLLT
Trigger: TGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACC...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGGTGTCCTGGTGGGTGTaGAGACTCTGTGGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWVSWWV*RLCGRL
Trigger: GAGCCTTCCACAGAGTCTCCACACCCACCAGGACAC...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR CCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCC +
Preference number: 2 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHGQDGY*PPVRGA
Trigger: GGCACCTCTCACCGGTGGCCAATAACCATCCTGTCC...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 2 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: PAPLLRENDVVTDHCELQRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCACAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCACAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 2 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 2 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 2 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 2 (lower is better)
Translates to: RHREDSPSGRENKVIIRKQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 2 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPASEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGTATCCTGAGGACAAGTaGTTTGAGATCAATGGCAAA +
Preference number: 2 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQYPEDK*FEINGK
Trigger: TTTGCCATTGATCTCAAAGCACTTGTCCTCAGGATA...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLRHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCTCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: PESPLPSHPPGNSFKGESSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: PLLRENDVVTDHCELQTLPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: SESEPCLCKCHTPALAHSLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 2 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLVGGAL*TRRLLR
Trigger: CCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTAC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAATGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGGGTCAGGACAGACTaGTGCCCTTATCCCAACCAG +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLGVRTD*CPYPNQ
Trigger: CTGGTTGGGATAAGGGCAGCAGTCTGTCCTGACCCC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAATTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: SHSKLRMSGGTGARPASQLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTT +
Preference number: 2 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLLPGYS*FKALGL
Trigger: AAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 2 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCSCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCCCTTTCCCATTTCTaGACCCATGGCAGACATGGC +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPSLSHF*THGRHG
Trigger: GCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGA...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 2 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR TCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 2 (lower is better)
Translates to: FTSEETNISGTGSKQARGGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR TCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 2 (lower is better)
Translates to: PLLRENDVVTDHCELQTLGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGTCAGAGTTGGCACATaGCAAATACCAAGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: RICTGRPYVQLEARGRLAVRVGT*QIPSSG
Trigger: CCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGAC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
3UTR-3UTR TCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATCTGGGCGAGAGCCTCTaGACTGCAGTTGGCCTGACC +
Preference number: 2 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNLGESL*TAVGLT
Trigger: GGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAG...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: RICTGRPYVQLEARGRLALEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCTCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPASYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 2 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTTTTCCAGTTAAGGACTaGGGGCCCGCAGTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLFPVKD*GPAVQE
Trigger: TTCTTGGACTGCGGGCCCTCAGTCCTTAACTGGAAA...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: RHREDSPSGRENKVIIRKCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 2 (lower is better)
Translates to: SELAHDKYQAQGEELGVNQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
3UTR-3UTR GCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAACCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: SHSKLRMSGGTGARPASQPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 2 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 2 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATACCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGC +
Preference number: 2 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAGISSS*IFLVQG
Trigger: GCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 2 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWSCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 2 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCTCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: RICTGRPYVQLEARGRLASNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGC +
Preference number: 2 (lower is better)
Translates to: PAPLLRENDVVTDHCELQGISSS*IFLVQG
Trigger: GCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 2 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGTCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 2 (lower is better)
Translates to: RHREDSPSGRENKVIIRKSYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR TCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 2 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVATATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 2 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCISCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR GCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 2 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 2 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 2 (lower is better)
Translates to: SELAHDKYQAQGEELGVNGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
3UTR-3UTR GCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTTATCCTGAGGACAAGTaGTTTGAGATCAATGGCAAA +
Preference number: 2 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLYPEDK*FEINGK
Trigger: TTTGCCATTGATCTCAAAGCACTTGTCCTCAGGATA...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAATCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: TWLNEYYTPSMSLDVASESNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp GTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTaGCCTGGGACTTCTTGGGAGCCAAGCCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: VSFSNPGRAGLG*PGTSWEPSPPR
Trigger: CCTGGGAGGGCTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 3 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp CTAGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGAC +
Preference number: 3 (lower is better)
Translates to: LGGGRQEGPRSL*LSGSLCAVRGD
Trigger: GTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 72 bp CAGAGACTCTCCGGCTGTCCTCAGACTCGGCTGTTCTaGGGCTCTGCGGGAGATTCTCCCTGGCTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: QRLSGCPQTRLF*GSAGDSPWLPS
Trigger: GGAGGGGAGCCAGGGAGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTGAGGACAGCCGGAGAGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR CCA 72 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTaGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCT +
Preference number: 3 (lower is better)
Translates to: GPRHSHHCQPGS*QLPAGGPLTFP
Trigger: AGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 3 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGRPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGCAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp GGGCTGTGCTGTGTCCAGATGGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTAAGGACTGAGGGCCCG +
Preference number: 3 (lower is better)
Translates to: GLCCVQMGSMGQ*TVTFQLRTEGP
Trigger: CGGGCCCTCAGTCCTTAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGACACAGCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp AGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCTGGAACAGCAACTCCA +
Preference number: 3 (lower is better)
Translates to: RPKKSLALRFPL*REGRPAGTATP
Trigger: TGGAGTTGCTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp AACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCTaGTTCCCTCACTGCCCACCTCAGAGTCAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: NISGTGSKQARG*FPHCPPQSQSW
Trigger: CCAACTCTGACTCTGAGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR CAA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 3 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 72 bp CGTGAGGGGCGACCAGCTGGAACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCC +
Preference number: 3 (lower is better)
Translates to: REGRPAGTATPV*RLPVSPVSGRA
Trigger: GGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGTCGCCCCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 72 bp CAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAACAGCAACTCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: QEVSGSQVPSVP*GATSWNSNSSV
Trigger: CACACTGGAGTTGCTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp GGGAGGGGGCTGGGAGCAAGCTATCCCTGCTATTCCTaGATCCCCCTGCTCTTCCCTATCCTGAGGACAAGT +
Preference number: 3 (lower is better)
Translates to: GRGLGASYPCYS*IPLLFPILRTS
Trigger: ACTTGTCCTCAGGATAGGGAAGAGCAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCCCAGCCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp TCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGTGTAACACCATTGCAT +
Preference number: 3 (lower is better)
Translates to: SPVSGRASEQQS*PAAGSSVTPLH
Trigger: ATGCAATGGTGTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp TGGTGGGACAGGGGCAAGGCCTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAAGGACAGCAATTCCCT +
Preference number: 3 (lower is better)
Translates to: WWDRGKACFPKR*QHTTGQGQQFP
Trigger: AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 3 (lower is better)
Translates to: RICTGRPYVQLEARGRLAAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 3 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCACCCCCTCAAGCAGCTaGGATCCCCAGCCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: RICTGRPYVQLEARGRLATPSSS*DPQPVP
Trigger: GGGGACAGGCTGGGGATCCAAGCTGCTTGAGGGGGT...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCACTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQRPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: SRGRSMHTQASKGARYGQNFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSRTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp GAACTGGGAGTTAACTGGGAAGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGGGTGCACGGTATGGGC +
Preference number: 3 (lower is better)
Translates to: ELGVNWEVGGAL*TRRLLRVHGMG
Trigger: GCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTTAACTCCCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp CCTGGATATTCCTGGTTCAAGGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGGTTCAGGCCTGTGAAG +
Preference number: 3 (lower is better)
Translates to: PGYSWFKALGLT*PTGPYWFRPVK
Trigger: CTTCACAGGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGCCTTGAACCAGGAATATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp GTGGTAGGTGAATTCACGGAAGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCCCTGGGTGTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: VVGEFTEGQDGY*PPVRGALGVLV
Trigger: CACCAGGACACCCAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACCTACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR-3UTR CAA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 3 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGNFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCAAGACACTCACACCATaGCCAGCCGGGCAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: RICTGRPYVQLEARGRLAKTLTP*PAGQLA
Trigger: TGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTT...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 72 bp ACTGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGGGGGCTCAAAGGGAAT +
Preference number: 3 (lower is better)
Translates to: TVSSRRSQERRQ*SCNTIWGLKGN
Trigger: ATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp AAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAGCATACCACAGGGCAA +
Preference number: 3 (lower is better)
Translates to: KAENEWWDRGKA*FPKRWQHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 72 bp ACTGAGGGCCCGCAGTCCAAGAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTATTACATGGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: TEGPQSKNMNPH*GSPGILLHGVG
Trigger: CCCCACTCCATGTAATAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCGGGCCCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCCTCTGCTCAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: LFASAHQPRPGC*LRDSCSSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp AAGCTATTTGCATCTGCCCACCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGCTCCTCTGCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: KLFASAHQPRPG*CLRDSCSSAQR
Trigger: TCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp AGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTACAGCTTGAAGCTAGG +
Preference number: 3 (lower is better)
Translates to: RLLRVHGMGRRI*TGRPYVQLEAR
Trigger: CCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp CACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGGGTGTCGGAGGCTCCC +
Preference number: 3 (lower is better)
Translates to: HLRYNFFPNPGS*WLGVGWVSEAP
Trigger: GGGAGCCTCCGACACCCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp ATTCCTATGTCAACGGAACCAAATTGGGGAGGGGGCTaGGAGCAAGCTATCCCTGCTATTCCTGCATCCCCC +
Preference number: 3 (lower is better)
Translates to: IPMSTEPNWGGG*EQAIPAIPASP
Trigger: GGGGGATGCAGGAATAGCAGGGATAGCTTGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGACATAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCACATGGTTCCTCCTTaGACCTCAGGCTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHHMVPP*TSGCTA
Trigger: TGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGTG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
3UTR CCA 72 bp GGCTGCTTCCCTCACTGCCCACCTCAGAGTCAGAGTTaGCACATGACAAATACCAAGCTCAGGGAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: GCFPHCPPQSQS*HMTNTKLREKN
Trigger: GTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGGTGGGCAGTGAGGGAAGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR CAA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: RICTGRPYVQLEARGRLALSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 3 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 3 (lower is better)
Translates to: SESEPCLCKCHTPALAHSNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 3 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLRTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp CCCATTGAGGAAGCCCAGGAATCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGGCATAGGGAGGATTCC +
Preference number: 3 (lower is better)
Translates to: PIEEAQESYYME*GSAVLRHREDS
Trigger: GGAATCCTCCCTATGCCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGATTCCTGGGCTTCCTCAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGTATGGGCAGGAGGATTaGCACTGGGAGGCCCTATGT +
Preference number: 3 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGYGQED*HWEALC
Trigger: ACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATA...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
3UTR-3UTR CAA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: TWLNEYYTPSMSLDVASERPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 3 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 3 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCAGCCCCTGCATGGTTaGGGAATCGTAAAATTCCTA +
Preference number: 3 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHQPLHG*GIVKFL
Trigger: TAGGAATTTTACGATTCCCAAACCATGCAGGGGCTG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp ATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGCTCTAGGGCTTACCTG +
Preference number: 3 (lower is better)
Translates to: IPSGGSKGISSS*IFLVQGSRAYL
Trigger: CAGGTAAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 3 (lower is better)
Translates to: RHREDSPSGRENKVIIRKAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR-3UTR CAA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 3 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR TCA 72 bp TTTCCCATTTCTGGACCCATGGCAGACATGGCTAAATaGATACTACACTCCTTCCATGAGCCTGGATGTAGC +
Preference number: 3 (lower is better)
Translates to: FPISGPMADMAK*ILHSFHEPGCS
Trigger: GCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp CAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATaGCTAAATGAATACTACACTCCTTCCATGAGCCTG +
Preference number: 3 (lower is better)
Translates to: QFPFPFLDPWQT*LNEYYTPSMSL
Trigger: CAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR GCA 72 bp ATTACTTCATTAATAACAGCAAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGA +
Preference number: 3 (lower is better)
Translates to: ITSLITAKAICI*PPAKTRLLLEG
Trigger: TCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTTATTAATGAAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
3UTR CCA 72 bp GAACAAAGTCATCATAAGGAAGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATTCCTATGTCAACGGAA +
Preference number: 3 (lower is better)
Translates to: EQSHHKEGSAPA*FGNRKIPMSTE
Trigger: TTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGAGCCTTCCTTATGATGACTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGCAGCAGGGCCCACGCTaGACTGGAGGGCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRQQGPR*TGGPLG
Trigger: GCCGAGGGGCCCTCCAGTCCAGCGTGGGCCCTGCTG...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCGGCTGTCCTCAGACTCGGCTGTTCTGAGGCTCTGCGGGAGATTCTCCCTGGCGGCACTGGCTCTGACTaGCCCTGGGCCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PAVLRLGCSEALREILPGGTGSD*PWAQVG
Trigger: GCCCACCTGGGCCCAGGGCCAGTCAGAGCCAGTGCC...GCCAGGGAGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTGAGGACAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR TCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGGCCCTCGGGCGTCTTaGCGTACTTGGGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFGPRAS*RTWARP
Trigger: TGGGCGAGCCCAAGTACGTCAAGACGCCCGAGGGCC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTAGCTGCCGGTGGACTTaGGGCTGTCGAGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGSCRWT*GCRAAA
Trigger: TGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGGGCTCCCTGCATGGCTaGAGGCGCCCGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQGSLHG*RRPSCR
Trigger: CCGGCAGCTCGGGCGCCTTCAGCCATGCAGGGAGCC...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGGGGCTCGAGTGGGGTaGAGAGGCAGGGCTGTCACG +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRGARVG*RGRAVT
Trigger: CGTGACAGCCCTGCCTCTGCACCCCACTCGAGCCCC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCGCGGTGGCCTCGATaGCCGCGCTGGCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTARWPR*PRWRRT
Trigger: AGTTCGCCGCCAGCGCGGGCATCGAGGCCACCGCGC...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCCCACGCGGCCGTGGTaGAAGACGGTGTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQPTRPW*KTVSGT
Trigger: GGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGG...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCCTCGATGCCCGCGCTaGCGGCGAACTCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGPRCPR*RRTRAC
Trigger: ACAAGCCCGAGTTCGCCGCCAGCGCGGGCATCGAGG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCGAGCCGCCGCAGCTTaGCCAGCTTGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWRAAAA*PACGSS
Trigger: GCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCCGGCCGGTCTGTGTTaGTGCCCACGCGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQPAGLC*CPRGRG
Trigger: ACCACGGCCGCGTGGGCATCAACACAGACCGGCCGG...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGGAGGTGGGGGCGGATaGTCCAGGCGGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQGGGGG*SRREGT
Trigger: AGTGCCCTCCCGCCTGGAGCATCCGCCCCCACCTCC...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGGGGGCTCGAGTGGGGTaGAGAGGCAGGGCTGTCACG +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLGARVG*RGRAVT
Trigger: CGTGACAGCCCTGCCTCTGCACCCCACTCGAGCCCC...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGCCTCCATGTCCCGCCTaGCCGGCGCACACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKPPCPA*PAHTPA
Trigger: GGCTGGAGTGTGCGCCGGGCAGGCGGGACATGGAGG...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278836.10
CDS-3UTR CCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGGCCTGGCAAGTGGGCTaGAGGTGGGGGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLAWQVG*RWGRML
Trigger: GAGCATCCGCCCCCACCTCCAGCCCACTTGCCAGGC...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCTGGGGAGGGGGCACCTaGCGGGTGCCAAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGWGGGT*RVPRRC
Trigger: ACACCGCCTTGGCACCCGCCAGGTGCCCCCTCCCCA...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGGTCCTGCAGGAGGCCTaGGGAGGGGGCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWVLQEA*GGGTWR
Trigger: CCGCCAGGTGCCCCCTCCCCAGGCCTCCTGCAGGAC...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGCTGTCGCTCTCGAACTaGCCTGGGTTGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQLSLSN*PGLEAR
Trigger: GCGGGCCTCCAACCCAGGCCAGTTCGAGAGCGACAG...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCCCCACGCGGCCGTGGTaGAAGACGGTGTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSPTRPW*KTVSGT
Trigger: GGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGG...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACCTGTCTCTGGCGCGGTaGCCTCGATGCCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDLSLAR*PRCPRW
Trigger: CCAGCGCGGGCATCGAGGCCACCGCGCCAGAGACAG...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCCTGTCTCTGGCGCGGTaGCCTCGATGCCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCLSLAR*PRCPRW
Trigger: CCAGCGCGGGCATCGAGGCCACCGCGCCAGAGACAG...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGCGGACAGCAGAACCTaGGGCCGAGCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQADSRT*GRAGEA
Trigger: AGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCGGCGGGCCCGGCCATaGAAACCAAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQRRARP*KPRLGL
Trigger: CAGTCCCAGCCTTGGTTTCCATGGCCGGGCCCGCCG...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCAGCAGGGCCCACGCTaGACTGGAGGGCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRQQGPR*TGGPLG
Trigger: GCCGAGGGGCCCTCCAGTCCAGCGTGGGCCCTGCTG...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCGGCCGGTCTGTGTTaGTGCCCACGCGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRPAGLC*CPRGRG
Trigger: ACCACGGCCGCGTGGGCATCAACACAGACCGGCCGG...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGAGCTGCCGGTGGACTTaGGGCTGTCGAGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKSCRWT*GCRAAA
Trigger: TGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCT...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGTTATTGGCCACCGGTaGGAGGTGCCCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRVIGHR*EVPWVS
Trigger: GGACACCCAGGGCACCTCTCACCGGTGGCCAATAAC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCAGAAGAAGGGAGGGATaGCCTGCTGGACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFRRREG*PAGPQG
Trigger: GCCCTGGGGTCCAGCAGGTCATCCCTCCCTTCTTCT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGAGAGTCCGGCAGTGTaGCTGGGGCATAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRESPAV*LGHREP
Trigger: AGGCTCCCTATGCCCCAGGCACACTGCCGGACTCTC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGGCACCTGTGCCCGCTaGCACAACACATCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQGTCAR*HNTSLS
Trigger: CGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTGCGCGGTGGCCTCGATaGCCGCGCTGGCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPARWPR*PRWRRT
Trigger: AGTTCGCCGCCAGCGCGGGCATCGAGGCCACCGCGC...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRGDCRS*VVPKLW
Trigger: CCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGGCCTGAGCGGTTGGTaGTGGGGCTGGGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGGLSGW*WGWDLG
Trigger: GCCCAAGTCCCAGCCCCAGCACCAACCGCTCAGGCC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGCCACCGGTGAGAGGTaGCCTGGGTGTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCATGER*PGCPGG
Trigger: CCCACCAGGACACCCAGGGCACCTCTCACCGGTGGC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGTCCCTGGTGTGGTGCTaGCTCAGGAGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQSLVWC*LRRAAQ
Trigger: CTGAGCTGCCCTCCTGAGGCAGCACCACACCAGGGA...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGTGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGAAGGGAGGGATGACCTaGTGGACCCCAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRKGGMT*WTPGQG
Trigger: TCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTT...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGAGGCCAGGGTGGCGATaGGGCTCGAGTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKRPGWR*GSSGVQ
Trigger: CTGCACCCCACTCGAGCCCCATCGCCACCCTGGCCT...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGGGGGAGAGCGGACCCTaGGGAGGCCAGGGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLGESGP*GGQGGD
Trigger: ATCGCCACCCTGGCCTCCCCAGGGTCCGCTCTCCCC...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATGTCCTGCAGGAGGCCTaGGGAGGGGGCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHVLQEA*GGGTWR
Trigger: CCGCCAGGTGCCCCCTCCCCAGGCCTCCTGCAGGAC...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACCGAGCCGCCGCAGCTTaGCCAGCTTGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDRAAAA*PACGSS
Trigger: GCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCG...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCGCCCGACTGAACTaGCTCCCTGCATGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWPARLN*LPAWLK
Trigger: CTTCAGCCATGCAGGGAGCCAGTTCAGTCGGGCGGG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGTGGGGCCTGAGCGGTTaGTGCTGGGGCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQWGLSG*CWGWDL
Trigger: CAAGTCCCAGCCCCAGCACCAACCGCTCAGGCCCCA...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCAGCAGGGCCCACGCTaGACTGGAGGGCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQQQGPR*TGGPLG
Trigger: GCCGAGGGGCCCTCCAGTCCAGCGTGGGCCCTGCTG...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCGGCTCTGACTGGCCCTaGGCCCAGGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPGSDWP*AQVGSA
Trigger: TGCTGAGCCCACCTGGGCCCAGGGCCAGTCAGAGCC...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000675345.1
CDS-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGTGCCAGCCGGGCAGCTaGCAGCTTCCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKCQPGS*QLPAGG
Trigger: GCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCA...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGTGCCAGCCGGGCAGCTaGCAGCTTCCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQCQPGS*QLPAGG
Trigger: GCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCA...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGGAGGCTGACTGGCCCTaGGCCCAGGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKEADWP*AQVGSA
Trigger: TGCTGAGCCCACCTGGGCCCAGGGCCAGTCAGCCTC...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGTGTGTAGGGAGCCCTaGGGCATAGGGAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRVCREP*GIGSLG
Trigger: CCCAAGGCTCCCTATGCCCCAGGGCTCCCTACACAC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675319.1
CDS-3UTR TCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGCATCCACGCGGTAGGTaGGCATGGGCAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQHPRGR*AWAAPC
Trigger: ACAAGGAGCTGCCCATGCTCACCTACCGCGTGGATG...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCCGGCCGGTCTGTGTTaGTGCCCACGCGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLPAGLC*CPRGRG
Trigger: ACCACGGCCGCGTGGGCATCAACACAGACCGGCCGG...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGCTCCCTGCATGGCTaGAGGCGCCCGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRGSLHG*RRPSCR
Trigger: CCGGCAGCTCGGGCGCCTTCAGCCATGCAGGGAGCC...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCAGGAAGCGCTGGCTaGTGCAGGCCTGGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTAGSAG*CRPGPE
Trigger: TTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGC...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGGAGGGCACTGGCTCTaGCTGGCCCTGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQGGHWL*LALGPG
Trigger: ACCTGGGCCCAGGGCCAGTCAGAGCCAGTGCCCTCC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000675345.1
CDS-3UTR GCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACACCTGCTGGAAGCCAGTaGATCCTGCCCGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTPAGSQ*ILPGGS
Trigger: GGACCCACCGGGCAGGATGCACTGGCTTCCAGCAGG...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR GCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTACTGAACTGGCTCCCTaGATGGCTGAAGGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGTELAP*MAEGAR
Trigger: TCGGGCGCCTTCAGCCATGCAGGGAGCCAGTTCAGT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGRHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGTGGTGGACCCCGCTaGAGCCAGGCATCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGGGPR*SQASQA
Trigger: AGCCTGCGATGCCTGGCTCCAGCGGGGTCCACCACC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTGGGGAGAGCGGACCCTaGGGAGGCCAGGGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPGESGP*GGQGGD
Trigger: ATCGCCACCCTGGCCTCCCCAGGGTCCGCTCTCCCC...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCTGGGGAGGGGGCACCTaGCGGGTGCCAAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGWGGGT*RVPRRC
Trigger: ACACCGCCTTGGCACCCGCCAGGTGCCCCCTCCCCA...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCCCACGCGGCCGTGGTaGAAGACGGTGTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPPTRPW*KTVSGT
Trigger: GGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGG...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGCCCACGCGGCCGTaGTGGAAGACGGTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGMPTRP*WKTVSG
Trigger: GCCCGACACCGTCTTCCACCACGGCCGCGTGGGCAT...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCTCGATGCCCGCGCTaGCGGCGAACTCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWPRCPR*RRTRAC
Trigger: ACAAGCCCGAGTTCGCCGCCAGCGCGGGCATCGAGG...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGCTGTCTCTGGCGCGGTaGCCTCGATGCCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLLSLAR*PRCPRW
Trigger: CCAGCGCGGGCATCGAGGCCACCGCGCCAGAGACAG...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGGCCTCTTCTTGTaGGGGACGCTGCCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLGGLFL*GTLPAR
Trigger: TCGGGCGGGCAGCGTCCCCCACAAGAAGAGGCCCCC...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCCCCTGCAGGAAGCGCTaGCTGATGCAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSPCRKR*LMQAWS
Trigger: GGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGG...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQTVGAA*SQSSGW
Trigger: CCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGT...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGGGTGTCCTGGTGGCGGACAGCAGAACCTaGGGCCGAGCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: EGQDGYWPPVRGALGVLVADSRT*GRAGEA
Trigger: AGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGC...CACCAGGACACCCAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGGCTGGGGCTGGGACTTaGGCTGAGAACATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQAGAGT*AENMAR
Trigger: CCTGGCCATGTTCTCAGCCCAAGTCCCAGCCCCAGC...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCTGGGGCCTGAGCGGTTaGTGCTGGGGCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSWGLSG*CWGWDL
Trigger: CAAGTCCCAGCCCCAGCACCAACCGCTCAGGCCCCA...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGGAAGGGCCATCTGGCTaGGGCCTGAGCGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKEGPSG*GLSGWC
Trigger: GCACCAACCGCTCAGGCCCCAGCCAGATGGCCCTTC...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGAAGGGCCATCTGGCTaGGGCCTGAGCGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGEGPSG*GLSGWC
Trigger: GCACCAACCGCTCAGGCCCCAGCCAGATGGCCCTTC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGTCTCCAGCACCTGGATaGAGGTCAGGGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWSPAPG*RSGRAL
Trigger: CAGTGCCCTCCCTGACCTCCATCCAGGTGCTGGAGA...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGG +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFQAEVQ*GATTDR
Trigger: CCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTG...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGCTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRLGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWLGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTGCCAGCCGGGCAGCTaGCAGCTTCCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTCQPGS*QLPAGG
Trigger: GCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGCTCCAGGGCACCGTTaGTGTCGTGGCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKAPGHR*CRGLLE
Trigger: TTCCAGCAGGCCACGACATCAACGGTGCCCTGGAGC...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR TCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCTCACCTCCTGAGCGATaGCACCTGTCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCSPPER*HLSLAR
Trigger: CCGCGCCAGAGACAGGTGTCATCGCTCAGGAGGTGA...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGGCTCCCTGCATGGCTaGAGGCGCCCGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLGSLHG*RRPSCR
Trigger: CCGGCAGCTCGGGCGCCTTCAGCCATGCAGGGAGCC...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGGAAGCCAGTGCATCCTaGCCGGTGGGTCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKEASAS*PVGPLS
Trigger: AGAGAGGGGACCCACCGGGCAGGATGCACTGGCTTC...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAGGAGGTGGGGGCGGATaGTCCAGGCGGGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQGGGGG*SRREGT
Trigger: AGTGCCCTCCCGCCTGGAGCATCCGCCCCCACCTCC...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTCAGCTCCGTGCTGCTaGAGGAGCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLSAPCC*RSWCSI
Trigger: GATGCTGCACCAGCTCCTGCAGCAGCACGGAGCTGA...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGGTGTCGGGCACCTGTaGCCGCTGCCACAACACATC +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCGVGHL*PLPQHI
Trigger: GATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTGGCCTGAGCGGTTGGTaGTGGGGCTGGGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSGLSGW*WGWDLG
Trigger: GCCCAAGTCCCAGCCCCAGCACCAACCGCTCAGGCC...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCGGCTGTCCTCAGACTCGGCTGTTCTGAGGCTCTGCGGGAGATTCTCCCTGGCCGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: PAVLRLGCSEALREILPGREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...GCCAGGGAGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTGAGGACAGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR GCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCTGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCACGGTTTTGGGGCTGTaGTGTGTCCAGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFTVLGL*CVQMGS
Trigger: GGAGCCCATCTGGACACAGCACAGCCCCAAAACCGT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGACGGTTTTGGGGCTGTaGTGTGTCCAGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRTVLGL*CVQMGS
Trigger: GGAGCCCATCTGGACACAGCACAGCCCCAAAACCGT...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACACCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAAGGGAGGGATGACCTaGTGGACCCCAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGKGGMT*WTPGQG
Trigger: TCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTT...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACAAGGGAGGGATGACCTaGTGGACCCCAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDKGGMT*WTPGQG
Trigger: TCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTT...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGTCCGGCAGTGTGCCTaGGGCATAGGGAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQVRQCA*GIGSLG
Trigger: CCCAAGGCTCCCTATGCCCCAGGCACACTGCCGGAC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCAAGTGGGCTGGAGGTaGGGGCGGATGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLQVGWR*GRMLQA
Trigger: CGCCTGGAGCATCCGCCCCCACCTCCAGCCCACTTG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGCGATGGGGCTCGAGTaGGGTGCAGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQAMGLE*GAEAGL
Trigger: CAGCCCTGCCTCTGCACCCCACTCGAGCCCCATCGC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGTGCCAAGGCGGTGTCTaGACACGGGCAATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQCQGGV*TRAMLR
Trigger: TCTCAGCATTGCCCGTGTCCAGACACCGCCTTGGCA...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCATGCCCACGCGGCCGTaGTGGAAGACGGTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGMPTRP*WKTVSG
Trigger: GCCCGACACCGTCTTCCACCACGGCCGCGTGGGCAT...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATCGAGCCGCCGCAGCTTaGCCAGCTTGTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHRAAAA*PACGSS
Trigger: GCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCG...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAACTGGCTCCCTGCATaGCTGAAGGCGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGNWLPA*LKAPEL
Trigger: CAGCTCGGGCGCCTTCAGCCATGCAGGGAGCCAGTT...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGTGCCTGGTAGCCCCGTaGTCAAGGGGGACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKCLVAP*SRGTVG
Trigger: TCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCA...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GGTGTGGTGCTGCCTCAGGAGGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAGCTGGGGCTGGGACTTaGGCTGAGAACATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GVVLPQEGSSVTQAVEVEAGAGT*AENMAR
Trigger: CCTGGCCATGTTCTCAGCCCAAGTCCCAGCCCCAGC...TTCCACTTCTACCGCCTGTGTGACTGAGCTGCCCTCCTGAGGCAGCACCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGGCAGAAGGGCCATCTaGCTGGGGCCTGAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQGRRAI*LGPERL
Trigger: CAACCGCTCAGGCCCCAGCCAGATGGCCCTTCTGCC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCGGCGGGCCCGGCCATaGAAACCAAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPRRARP*KPRLGL
Trigger: CAGTCCCAGCCTTGGTTTCCATGGCCGGGCCCGCCG...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCCTGCAGGCATCCCCTaGAGCACAGTACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQPAGIP*STVLGG
Trigger: ACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGG...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGTGTGGAGACTCTGTaGAAGGCTCCCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGGVETL*KAPLLT
Trigger: TGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACC...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRGQDGY*PPVRGA
Trigger: GGCACCTCTCACCGGTGGCCAATAACCATCCTGTCC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCAACCCAGGGTCTTGGTaGTTGGGAGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFNPGSW*LGVGWV
Trigger: CACCCATCCCACTCCCAACCACCAAGACCCTGGGTT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGCCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRPNPGS*WLGVGW
Trigger: CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGG...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGAATTGGGGAGGGGGCTaGGAGCAAGCTATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRNWGGG*EQAIPA
Trigger: AGCAGGGATAGCTTGCTCCCAGCCCCCTCCCCAATT...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGTGCCAGCCGGGCAGCTaGCAGCTTCCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLCQPGS*QLPAGG
Trigger: GCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCA...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGGTGGTCCCAAAGCTCTaGCTGGACCATGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWVVPKL*LDHGHK
Trigger: CTTGTGCCCATGGTCCAGCCAGAGCTTTGGGACCAC...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGAGGCTGACTGGCCCTaGGCCCAGGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQEADWP*AQVGSA
Trigger: TGCTGAGCCCACCTGGGCCCAGGGCCAGTCAGCCTC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACGGTCAGGGAGGGCACTaGCTCTGCAAGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDGQGGH*LCKERG
Trigger: GCCTCTCTCCTTGCAGAGCCAGTGCCCTCCCTGACC...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACGGCCCTCGGGCGTCTTaGCGTACTTGGGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHGPRAS*RTWARP
Trigger: TGGGCGAGCCCAAGTACGTCAAGACGCCCGAGGGCC...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATGGCCCTCGGGCGTCTTaGCGTACTTGGGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDGPRAS*RTWARP
Trigger: TGGGCGAGCCCAAGTACGTCAAGACGCCCGAGGGCC...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCGCAGGAAGCGCTGGCTaGTGCAGGCCTGGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPAGSAG*CRPGPE
Trigger: TTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGC...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCCCACCACCAGGGCAATaGTGGTTCCCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSPPPGQ*WFPAGS
Trigger: GCTTCCTGCAGGGAACCATCATTGCCCTGGTGGTGG...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACACCACCACCAGGGCAATaGTGGTTCCCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTPPPGQ*WFPAGS
Trigger: GCTTCCTGCAGGGAACCATCATTGCCCTGGTGGTGG...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGAGGGTTGGTAGTGGGTaGGGAACAGCAGATGACAGG +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRRVGSG*GTADDR
Trigger: CCTGTCATCTGCTGTTCCTCACCCACTACCAACCCT...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGAGGGTTGGTAGTGGGTaGGGAACAGCAGATGACAGG +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWRVGSG*GTADDR
Trigger: CCTGTCATCTGCTGTTCCTCACCCACTACCAACCCT...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGGGAGGGCACTGGCTCTaGCTGGCCCTGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWGGHWL*LALGPG
Trigger: ACCTGGGCCCAGGGCCAGTCAGAGCCAGTGCCCTCC...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000675345.1
CDS-3UTR TCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTCTGCAGAGTCAGGCTaGGGTGCAGTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTSAESG*GAVGCH
Trigger: GTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTGTTATTGGCCACCGGTaGGAGGTGCCCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGVIGHR*EVPWVS
Trigger: GGACACCCAGGGCACCTCTCACCGGTGGCCAATAAC...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGGTTATTGGCCACCGGTaGGAGGTGCCCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWVIGHR*EVPWVS
Trigger: GGACACCCAGGGCACCTCTCACCGGTGGCCAATAAC...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCTGGGCGAGAGCCTCTaGACTGCAGTTGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRLGESL*TAVGLT
Trigger: GGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAG...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGCGCAGTCCAAGAACATaGACCCCCATTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRRSPRT*TPIEEA
Trigger: GGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCG...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCAGGCTGTCACTGTCCTaGAGGAGGCCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLRLSLS*RRPGEG
Trigger: CCCCTCCCCAGGCCTCCTGCAGGACAGTGACAGCCT...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGGTCCGGGTTGGGCTTaGCCTTCTTACGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFGPGWA*PSYACC
Trigger: ACAACATGCGTAAGAAGGGCAAGCCCAACCCGGACC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCGCAGGTCGGAGGGGTaGATAAGCGAGCCCATGACC +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTRRSEG*ISEPMT
Trigger: GGTCATGGGCTCGCTTATGCACCCCTCCGACCTGCG...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGGGTTGTCTGTCAGCTTaGACAGCTCCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLGCLSA*TAPSRP
Trigger: GGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACC...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGGCAAAGAGGGCTGTATaGCTGGTAGCCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLAKRAV*LVAPWS
Trigger: TGACCACGGGGCTACCAGGCATACAGCCCTCTTTGC...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGAACACATGTCCAAGGTaGGGACAGCAGAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWNTCPR*GQQNLG
Trigger: CCCCAGGTTCTGCTGTCCGCACCTTGGACATGTGTT...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCAACACATGTCCAAGGTaGGGACAGCAGAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFNTCPR*GQQNLG
Trigger: CCCCAGGTTCTGCTGTCCGCACCTTGGACATGTGTT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGDRGKA*FPKRWQ
Trigger: CTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSDRGKA*FPKRWQ
Trigger: CTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTC...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAACCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKRHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCGCACCGTTGATGTCGTaGCCTGCTGGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSAPLMS*PAGSQC
Trigger: GCACTGGCTTCCAGCAGGCCACGACATCAACGGTGC...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCCTCGGAGCCCGAGTCTaGGGGAGAGTCCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGLGARV*GRVRQC
Trigger: ACACTGCCGGACTCTCCCCCAGACTCGGGCTCCGAG...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCGGGGAGAGCGGACCCTaGGGAGGCCAGGGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLGESGP*GGQGGD
Trigger: ATCGCCACCCTGGCCTCCCCAGGGTCCGCTCTCCCC...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGTGCCAAGGCGGTGTCTaGACACGGGCAATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQCQGGV*TRAMLR
Trigger: TCTCAGCATTGCCCGTGTCCAGACACCGCCTTGGCA...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGTGGGGAGGGGGCACCTaGCGGGTGCCAAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAWGGGT*RVPRRC
Trigger: ACACCGCCTTGGCACCCGCCAGGTGCCCCCTCCCCA...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCCCTGCACGTGTTCCTTaGCGCGCAGGTCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGPARVP*RAGRRG
Trigger: ACCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGG...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGGGGGCCTCTTCTTGTaGGGGACGCTGCCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGGGLFL*GTLPAR
Trigger: TCGGGCGGGCAGCGTCCCCCACAAGAAGAGGCCCCC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGGGGGCCTCTTCTTGTaGGGGACGCTGCCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFGGLFL*GTLPAR
Trigger: TCGGGCGGGCAGCGTCCCCCACAAGAAGAGGCCCCC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGACTTGCTGGCCACCTTaGGGGGCCTCTTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKTCWPP*GASSCG
Trigger: CCCACAAGAAGAGGCCCCCCAAGGTGGCCAGCAAGT...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGTGGCTGATGCAGGCCTaGTCCGGAACCACGGACGAT +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKWLMQA*SGTTDD
Trigger: ATCGTCCGTGGTTCCGGACCAGGCCTGCATCAGCCA...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCGCGGACAGCAGAACCTaGGGCCGAGCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGADSRT*GRAGEA
Trigger: AGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGC...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGCGGACAGCAGAACCTaGGGCCGAGCTGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQADSRT*GRAGEA
Trigger: AGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGGGGCCTGAGCGGTTaGTGCTGGGGCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGWGLSG*CWGWDL
Trigger: CAAGTCCCAGCCCCAGCACCAACCGCTCAGGCCCCA...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATTGGGGCCTGAGCGGTTaGTGCTGGGGCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHWGLSG*CWGWDL
Trigger: CAAGTCCCAGCCCCAGCACCAACCGCTCAGGCCCCA...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCGGCAGAAGGGCCATCTaGCTGGGGCCTGAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESGRRAI*LGPERL
Trigger: CAACCGCTCAGGCCCCAGCCAGATGGCCCTTCTGCC...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGGCACTGGCTCTGACTaGCCCTGGGCCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQGTGSD*PWAQVG
Trigger: GCCCACCTGGGCCCAGGGCCAGTCAGAGCCAGTGCC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGCCTGCAGGCATCCCCTaGAGCACAGTACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQPAGIP*STVLGG
Trigger: ACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGG...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCQAEVQ*GATTDR
Trigger: CCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTG...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGTGCCTGGGCACCCCTaGTCCCTGGTGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAVPGHP*SLVWCC
Trigger: GCAGCACCACACCAGGGACCAGGGGTGCCCAGGCAC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPLGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCCTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSLGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTGCCAGCCGGGCAGCTaGCAGCTTCCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDCQPGS*QLPAGG
Trigger: GCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGGGGTCTGGGTGTCCTaGTGGGTGTGGAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGGVWVS*WVWRLC
Trigger: ACAGAGTCTCCACACCCACCAGGACACCCAGACCCC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675792.1
CDS-3UTR TCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCCGCTTGCTCCGGTCTaGCTGGGACTGCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTPLAPV*LGLLDV
Trigger: AACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGG...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGTGGAGGCCCGCACAATaGTGCGCTCTGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWWRPAQ*CALRSG
Trigger: CCCAGATCTCAGAGCGCATCATTGTGCGGGCCTCCA...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAATGGAGGCCCGCACAATaGTGCGCTCTGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQWRPAQ*CALRSG
Trigger: CCCAGATCTCAGAGCGCATCATTGTGCGGGCCTCCA...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCTCACCTCCTGAGCGATaGCACCTGTCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLSPPER*HLSLAR
Trigger: CCGCGCCAGAGACAGGTGTCATCGCTCAGGAGGTGA...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGGCCAATGCCATTGACTaGAAGACCCCAGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLANAID*KTPGLG
Trigger: GCCAAGTCCTGGGGTCTTTCAGTCAATGGCATTGGC...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGAGTGGCCAATGCCATTaGCTGAAAGACCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRSGQCH*LKDPRT
Trigger: AGTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACT...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCTCTGCAGAGTCAGGCTaGGGTGCAGTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPSAESG*GAVGCH
Trigger: GTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGA...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCTGGGCGAGAGCCTCTaGACTGCAGTTGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLLGESL*TAVGLT
Trigger: GGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGACTTTGGTCCAAGGTTaGCCCCCTCAAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLTLVQG*PPQAAW
Trigger: CCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGT...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTAGAAGAAGGGAGGGATaGCCTGCTGGACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSRRREG*PAGPQG
Trigger: GCCCTGGGGTCCAGCAGGTCATCCCTCCCTTCTTCT...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCTGCAGTTCAGCGGGGTaGCGTAGCCCGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLCSSAG*RSPGVG
Trigger: TCCCACCCCCGGGCTACGGCACCCCGCTGAACTGCA...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCTGGGGGCAGCGCCCATaGCGTTGTTGTTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSWGQRP*RCCCCS
Trigger: ACTGCAACAACAACAACGGCATGGGCGCTGCCCCCA...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTGCTGCAGGAGCTGGTaGAGCATCTGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLCCRSW*SIWDCW
Trigger: CCAGCAGTCCCAGATGCTGCACCAGCTCCTGCAGCA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGTGCTGCAGGAGCTGGTaGAGCATCTGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRCCRSW*SIWDCW
Trigger: CCAGCAGTCCCAGATGCTGCACCAGCTCCTGCAGCA...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTCAGCTCCGTGCTGCTaGAGGAGCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTSAPCC*RSWCSI
Trigger: GATGCTGCACCAGCTCCTGCAGCAGCACGGAGCTGA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCATGGGCTCGCCCAGCATaGCGATGTACACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISWARPA*RCTLSP
Trigger: AGGTGACAGTGTACATCGGCATGCTGGGCGAGCCCA...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGTCACCTTCGTGACCTaGTCAGGGGGCAGATTGACC +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGVTFVT*SGGRLT
Trigger: GGTCAATCTGCCCCCTGAGCAGGTCACGAAGGTGAC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGTCACCTTCGTGACCTaGTCAGGGGGCAGATTGACC +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCVTFVT*SGGRLT
Trigger: GGTCAATCTGCCCCCTGAGCAGGTCACGAAGGTGAC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGTCACCTTCGTGACCTaGTCAGGGGGCAGATTGACC +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISVTFVT*SGGRLT
Trigger: GGTCAATCTGCCCCCTGAGCAGGTCACGAAGGTGAC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGTGGTGTCCACCTCCTaGACGTGTTCCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQVVSTS*TCSLAR
Trigger: GCGCGCCAAGGAACACGTGCAGGAGGTGGACACCAC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCGTGGTGTCCACCTCCTaGACGTGTTCCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPVVSTS*TCSLAR
Trigger: GCGCGCCAAGGAACACGTGCAGGAGGTGGACACCAC...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGAGATCCTCTTCAATTaGTCGGTGGTGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFEILFN*SVVSTS
Trigger: GGAGGTGGACACCACCGAGCAATTGAAGAGGATCTC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGAGATCCTCTTCAATTaGTCGGTGGTGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQEILFN*SVVSTS
Trigger: GGAGGTGGACACCACCGAGCAATTGAAGAGGATCTC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGCGCGGTGGCCTCGATaGCCGCGCTGGCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWARWPR*PRWRRT
Trigger: AGTTCGCCGCCAGCGCGGGCATCGAGGCCACCGCGC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQGDCRS*VVPKLW
Trigger: CCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCGGCCTGAGCGGTTGGTaGTGGGGCTGGGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGGLSGW*WGWDLG
Trigger: GCCCAAGTCCCAGCCCCAGCACCAACCGCTCAGGCC...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTTCTTGGCTTTGCCCTaGCCCCCAGGGAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTFLALP*PPGKGT
Trigger: AGTCCCCTTCCCTGGGGGGCAGGGCAAAGCCAAGAA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCACCTTTGACCTCAGGCTaGACAGCACCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISPLTSG*TAPQTR
Trigger: CCGTGTCTGTGGTGCTGTGCAGCCTGAGGTCAAAGG...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGCCACCGGTGAGAGGTaGCCTGGGTGTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFATGER*PGCPGG
Trigger: CCCACCAGGACACCCAGGGCACCTCTCACCGGTGGC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGGGTGTCCTGGTGCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGQDGYWPPVRGALGVLVQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...CACCAGGACACCCAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRDRGKA*FPKRWQ
Trigger: CTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCAAGGGAGGGATGACCTaGTGGACCCCAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCKGGMT*WTPGQG
Trigger: TCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTT...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPVGGAL*TRRLLR
Trigger: CCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTAC...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGTGCATCCTGCCCGGTaGGTCCCCTCTCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLVHPAR*VPSLQA
Trigger: GGCCTGCAGAGAGGGGACCCACCGGGCAGGATGCAC...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGTGCTGGTGTCTATGTTaGAGGGCTCCAGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKCWCLC*RAPGHR
Trigger: ACGGTGCCCTGGAGCCCTCCAACATAGACACCAGCA...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGACTCCTCCAGGATGCTaGTGTCTATGTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWTPPGC*CLCWRA
Trigger: AGCCCTCCAACATAGACACCAGCATCCTGGAGGAGT...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGCGATGGGGCTCGAGTaGGGTGCAGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAAMGLE*GAEAGL
Trigger: CAGCCCTGCCTCTGCACCCCACTCGAGCCCCATCGC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGCGATGGGGCTCGAGTaGGGTGCAGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFAMGLE*GAEAGL
Trigger: CAGCCCTGCCTCTGCACCCCACTCGAGCCCCATCGC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCAGGCCAGGGTGGCGATaGGGCTCGAGTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFRPGWR*GSSGVQ
Trigger: CTGCACCCCACTCGAGCCCCATCGCCACCCTGGCCT...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGTCCTGCAGGAGGCCTaGGGAGGGGGCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGVLQEA*GGGTWR
Trigger: CCGCCAGGTGCCCCCTCCCCAGGCCTCCTGCAGGAC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGACCTCTGGTCCGGGTTaGGCTTGCCCTTCTTACGCA +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQTSGPG*ACPSYA
Trigger: TGCGTAAGAAGGGCAAGCCCAACCCGGACCAGAGGT...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTGTCGCTCTCGAACTaGCCTGGGTTGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKLSLSN*PGLEAR
Trigger: GCGGGCCTCCAACCCAGGCCAGTTCGAGAGCGACAG...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAATGCCCACGCGGCCGTaGTGGAAGACGGTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPMPTRP*WKTVSG
Trigger: GCCCGACACCGTCTTCCACCACGGCCGCGTGGGCAT...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAACCTGCACGTGTTCCTTaGCGCGCAGGTCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQPARVP*RAGRRG
Trigger: ACCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGG...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGACCTCGATGCCCGCGCTaGCGGCGAACTCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGPRCPR*RRTRAC
Trigger: ACAAGCCCGAGTTCGCCGCCAGCGCGGGCATCGAGG...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCCCCGCCCGACTGAACTaGCTCCCTGCATGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGPARLN*LPAWLK
Trigger: CTTCAGCCATGCAGGGAGCCAGTTCAGTCGGGCGGG...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTACTTGCTGGCCACCTTaGGGGGCCTCTTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGTCWPP*GASSCG
Trigger: CCCACAAGAAGAGGCCCCCCAAGGTGGCCAGCAAGT...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATTGCCTGGTAGCCCCGTaGTCAAGGGGGACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHCLVAP*SRGTVG
Trigger: TCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCA...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCTGCCTGGTAGCCCCGTaGTCAAGGGGGACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSCLVAP*SRGTVG
Trigger: TCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCA...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCGCTGGGGCTGGGACTTaGGCTGAGAACATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPAGAGT*AENMAR
Trigger: CCTGGCCATGTTCTCAGCCCAAGTCCCAGCCCCAGC...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCCTGGAGCACAGTACTaGGAGGTGATGGACATCGAA +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGPGAQY*EVMDIE
Trigger: TTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGGTGTGGAGACTCTGTaGAAGGCTCCCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGGVETL*KAPLLT
Trigger: TGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGTGTCCTGGTGGGTGTaGAGACTCTGTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTVSWWV*RLCGRL
Trigger: GAGCCTTCCACAGAGTCTCCACACCCACCAGGACAC...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAACCCAGGGTCTTGGTaGTTGGGAGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGNPGSW*LGVGWV
Trigger: CACCCATCCCACTCCCAACCACCAAGACCCTGGGTT...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTGGTGCTGCCTCAGGAGGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAGTGAACCCAGGGTCTTGGTaGTTGGGAGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: VVLPQEGSSVTQAVEVEVNPGSW*LGVGWV
Trigger: CACCCATCCCACTCCCAACCACCAAGACCCTGGGTT...CACTTCCACTTCTACCGCCTGTGTGACTGAGCTGCCCTCCTGAGGCAGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCCCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCPNPGS*WLGVGW
Trigger: CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGG...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACAATTGGGGAGGGGGCTaGGAGCAAGCTATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDNWGGG*EQAIPA
Trigger: AGCAGGGATAGCTTGCTCCCAGCCCCCTCCCCAATT...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCAGGAGGATTTGCACTaGGAGGCCCTATGTACAGCT +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGQEDLH*EALCTA
Trigger: AGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGTGGTCCCAAAGCTCTaGCTGGACCATGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISVVPKL*LDHGHK
Trigger: CTTGTGCCCATGGTCCAGCCAGAGCTTTGGGACCAC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGATGAGGCTGCCACTTaGTGGACTGGTAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGDEAAT*WTGSWG
Trigger: ACCCCAACTACCAGTCCATCAAGTGGCAGCCTCATC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGATGAGGCTGCCACTTaGTGGACTGGTAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKDEAAT*WTGSWG
Trigger: ACCCCAACTACCAGTCCATCAAGTGGCAGCCTCATC...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCATCCACGCGGTAGGTaGGCATGGGCAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSHPRGR*AWAAPC
Trigger: ACAAGGAGCTGCCCATGCTCACCTACCGCGTGGATG...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCCGCTTGCTCCGGTCTaGCTGGGACTGCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLPLAPV*LGLLDV
Trigger: AACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGG...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCCACAGTCACCTTCGTaGCCTGCTCAGGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESPQSPS*PAQGAD
Trigger: ATCTGCCCCCTGAGCAGGTCACGAAGGTGACTGTGG...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCCACAGTCACCTTCGTaGCCTGCTCAGGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLPQSPS*PAQGAD
Trigger: ATCTGCCCCCTGAGCAGGTCACGAAGGTGACTGTGG...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATGGGCCACCACCAGCATaGAGTACCTCTGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDGPPPA*STSGPG
Trigger: ACCCGGACCAGAGGTACTTCATGCTGGTGGTGGCCC...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCACAATGATGCGCTCTaGGATCTGGGCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSHNDAL*DLGGQR
Trigger: ACGCTGGCCGCCCAGATCTCAGAGCGCATCATTGTG...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGCACAATGATGCGCTCTaGGATCTGGGCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQHNDAL*DLGGQR
Trigger: ACGCTGGCCGCCCAGATCTCAGAGCGCATCATTGTG...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAATCACCTCCTGAGCGATaGCACCTGTCTCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQSPPER*HLSLAR
Trigger: CCGCGCCAGAGACAGGTGTCATCGCTCAGGAGGTGA...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAGCAGGAAGCGCTGGCTaGTGCAGGCCTGGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAAGSAG*CRPGPE
Trigger: TTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGC...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCCCACCACCAGGGCAATaGTGGTTCCCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGPPPGQ*WFPAGS
Trigger: GCTTCCTGCAGGGAACCATCATTGCCCTGGTGGTGG...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACGGCTCCAGACTCTTGTaGTGCTTGGAGTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDGSRLL*CLEWPM
Trigger: CATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCC...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGHSTGR*WTSNSP
Trigger: TGGAGAATTCGATGTCCATCACCTCCCAGTACTGTG...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGTCCCTCCAGGGCACCTaGACCAGCCCTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGSLQGT*TSPPTT
Trigger: GGTGGTTGGAGGGCTGGTTCAGGTGCCCTGGAGGGA...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGTGTGGTGCTGCCTCAGGAGGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GVVLPQEGSSVTQAVEVERENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...TTCCACTTCTACCGCCTGTGTGACTGAGCTGCCCTCCTGAGGCAGCACCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCACTTTGGTCCAAGGTTaGCCCCCTCAAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCTLVQG*PPQAAW
Trigger: CCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGT...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACACTTTGGTCCAAGGTTaGCCCCCTCAAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDTLVQG*PPQAAW
Trigger: CCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGT...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCAGAAGAAGGGAGGGATaGCCTGCTGGACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPARRREG*PAGPQG
Trigger: GCCCTGGGGTCCAGCAGGTCATCCCTCCCTTCTTCT...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCGTCAGAGTTGGCACATaGCAAATACCAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFVRVGT*QIPSSG
Trigger: CCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGAC...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGTTATTGGCCACCGGTaGGAGGTGCCCTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQVIGHR*EVPWRE
Trigger: TTCTCTCCAGGGCACCTCTCACCGGTGGCCAATAAC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675792.1
CDS-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGAGAGTCCGGCAGTGTaGCTGGGGCATAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKESPAV*LGHREP
Trigger: AGGCTCCCTATGCCCCAGGCACACTGCCGGACTCTC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGGGAGCTCAGCTCCGTaGTGCTGCAGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQGSSAP*CCRSWC
Trigger: GCACCAGCTCCTGCAGCAGCACGGAGCTGAGCTCCC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGGAGCTCAGCTCCGTaGTGCTGCAGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHGSSAP*CCRSWC
Trigger: GCACCAGCTCCTGCAGCAGCACGGAGCTGAGCTCCC...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATAGGCTGTCACTGTCCTaGAGGAGGCCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHRLSLS*RRPGEG
Trigger: CCCCTCCCCAGGCCTCCTGCAGGACAGTGACAGCCT...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCGCAGGTCGGAGGGGTaGATAAGCGAGCCCATGACC +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKRRSEG*ISEPMT
Trigger: GGTCATGGGCTCGCTTATGCACCCCTCCGACCTGCG...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTGGTTGTCTGTCAGCTTaGACAGCTCCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGGCLSA*TAPSRP
Trigger: GGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACC...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCACTGAACTGGCTCCCTaGATGGCTGAAGGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLTELAP*MAEGAR
Trigger: TCGGGCGCCTTCAGCCATGCAGGGAGCCAGTTCAGT...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCGCAATGATGGTTCCCTaGAGGAAGCGCTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCAMMVP*RKRWLM
Trigger: CATCAGCCAGCGCTTCCTGCAGGGAACCATCATTGC...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQGDCRS*VVPKLW
Trigger: CCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCC...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGGGCCTGAGCGGTTGGTaGTGGGGCTGGGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKGLSGW*WGWDLG
Trigger: GCCCAAGTCCCAGCCCCAGCACCAACCGCTCAGGCC...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGAGAGTCAGGCTGAGGTaGAGTGGGGTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLRVRLR*SGVPLL
Trigger: CAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCT...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGAGAGTCAGGCTGAGGTaGAGTGGGGTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRRVRLR*SGVPLL
Trigger: CAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCT...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTAGAGTCAGGCTGAGGTaGAGTGGGGTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGRVRLR*SGVPLL
Trigger: CAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCT...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTCCCTGGTGTGGTGCTaGCTCAGGAGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHSLVWC*LRRAAQ
Trigger: CTGAGCTGCCCTCCTGAGGCAGCACCACACCAGGGA...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGTCCCTGGTGTGGTGCTaGCTCAGGAGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKSLVWC*LRRAAQ
Trigger: CTGAGCTGCCCTCCTGAGGCAGCACCACACCAGGGA...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGACGGTTTTGGGGCTGTaGTGTGTCCAGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLTVLGL*CVQMGS
Trigger: GGAGCCCATCTGGACACAGCACAGCCCCAAAACCGT...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCCCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLRHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCAAGCAGGCCCGGGGCTaGTTCCCTCACTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLKQARG*FPHCPP
Trigger: AGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGCTT...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR GCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGCCTTCGAAGAAGCGCTaGAGCGCCTCCGTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGPSKKR*SASVSS
Trigger: GGACGAGACGGAGGCGCTGCAGCGCTTCTTCGAAGG...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278836.10
CDS-3UTR GCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGGCACTCACTTCATCTaGAGAGTCAGGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGGTHFI*RVRLRC
Trigger: GCACCTCAGCCTGACTCTGCAGATGAAGTGAGTGCC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGGGTCAGGACAGACTaGTGCCCTTATCCCAACCAG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGVRTD*CPYPNQ
Trigger: CTGGTTGGGATAAGGGCAGCAGTCTGTCCTGACCCC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000675792.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCGGAGGCCGAGCTGGCTaGAGCAGAGATGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGGGRAG*SRDVRE
Trigger: TTCCCTGACATCTCTGCTCCAGCCAGCTCGGCCTCC...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTAGGCCAGGGTGGCGATaGGGCTCGAGTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLRPGWR*GSSGVQ
Trigger: CTGCACCCCACTCGAGCCCCATCGCCACCCTGGCCT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCAAGTGGTTCTTCTTCTaGCACACAAAGGCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFKWFFF*HTKASS
Trigger: CGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTT...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTTTGCTCCGGTCTGACTaGGACTGCTCGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGLLRSD*DCSMLM
Trigger: CATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAA...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGCCTGCACGTGTTCCTTaGCGCGCAGGTCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWPARVP*RAGRRG
Trigger: ACCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGG...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTCTTCAATTGCTCGGTaGTGTCCACCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLSSIAR*CPPPAR
Trigger: ACGTGCAGGAGGTGGACACCACCGAGCAATTGAAGA...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCACTTGCTGGCCACCTTaGGGGGCCTCTTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESTCWPP*GASSCG
Trigger: CCCACAAGAAGAGGCCCCCCAAGGTGGCCAGCAAGT...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGTGGCTGATGCAGGCCTaGTCCGGAACCACGGACGAT +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQWLMQA*SGTTDD
Trigger: ATCGTCCGTGGTTCCGGACCAGGCCTGCATCAGCCA...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCCCTGCAGGAAGCGCTaGCTGATGCAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWPCRKR*LMQAWS
Trigger: GGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGG...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGCCCTGCAGGAAGCGCTaGCTGATGCAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLPCRKR*LMQAWS
Trigger: GGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGG...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSTVGAA*SQSSGW
Trigger: CCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPTVGAA*SQSSGW
Trigger: CCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGT...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GTGGTGCTGCCTCAGGAGGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAGTGATGACAGGGCAGGGGTaGCTGGAACACATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VVLPQEGSSVTQAVEVEVMTGQG*LEHMSK
Trigger: CTTGGACATGTGTTCCAGCCACCCCTGCCCTGTCAT...CACTTCCACTTCTACCGCCTGTGTGACTGAGCTGCCCTCCTGAGGCAGCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR CCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCGAAGGGCCATCTGGCTaGGGCCTGAGCGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGEGPSG*GLSGWC
Trigger: GCACCAACCGCTCAGGCCCCAGCCAGATGGCCCTTC...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAGGCAGAAGGGCCATCTaGCTGGGGCCTGAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAGRRAI*LGPERL
Trigger: CAACCGCTCAGGCCCCAGCCAGATGGCCCTTCTGCC...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCGGCGGGCCCGGCCATaGAAACCAAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLRRARP*KPRLGL
Trigger: CAGTCCCAGCCTTGGTTTCCATGGCCGGGCCCGCCG...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATCAGCAGGGCCCACGCTaGACTGGAGGGCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYQQGPR*TGGPLG
Trigger: GCCGAGGGGCCCTCCAGTCCAGCGTGGGCCCTGCTG...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGTCTCCAGCACCTGGATaGAGGTCAGGGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQSPAPG*RSGRAL
Trigger: CAGTGCCCTCCCTGACCTCCATCCAGGTGCTGGAGA...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCCTGCAGGCATCCCCTaGAGCACAGTACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPPAGIP*STVLGG
Trigger: ACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGG...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCCTGCAGGCATCCCCTaGAGCACAGTACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLPAGIP*STVLGG
Trigger: ACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGG +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQQAEVQ*GATTDR
Trigger: CCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTG...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGG +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSQAEVQ*GATTDR
Trigger: CCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTG...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQGQDGY*PPVRGA
Trigger: GGCACCTCTCACCGGTGGCCAATAACCATCCTGTCC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGGGTGTCCTGGTGCACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 4 (lower is better)
Translates to: EGQDGYWPPVRGALGVLVHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...CACCAGGACACCCAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACCACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTGGCCTCGGCTGCCCTaGGACTTCTTGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDWPRLP*DFLGAK
Trigger: CTTGGCTCCCAAGAAGTCCCAGGGCAGCCGAGGCCA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGTTGGGAGTGGGATaGGTGTCGGAGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHWLGVG*VSEAPW
Trigger: CCAGGGAGCCTCCGACACCCATCCCACTCCCAACCA...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRPNPGS*WLGVGW
Trigger: CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGG...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGCTGAGAATGAGTGGTaGGACAGGGGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLAENEW*DRGKAC
Trigger: GCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGC...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTCCCAAAGCTCTGGCTaGACCATGGGCACAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTSQSSG*TMGTRP
Trigger: AGGCCTTGTGCCCATGGTCCAGCCAGAGCTTTGGGA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGCGCCCACCGAAAAGTTaGAGCCCTTGTCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQRPPKS*SPCPHP
Trigger: TGGATGCGGACAAGGGCTTCAACTTTTCGGTGGGCG...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCGGGCCACCACCAGCATaGAGTACCTCTGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLGPPPA*STSGPG
Trigger: ACCCGGACCAGAGGTACTTCATGCTGGTGGTGGCCC...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATCCACCACCAGGGCAATaGTGGTTCCCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDPPPGQ*WFPAGS
Trigger: GCTTCCTGCAGGGAACCATCATTGCCCTGGTGGTGG...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGGCCAATGCCATTGACTaGAAGACCCCAGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLANAID*KTPGLG
Trigger: GCCAAGTCCTGGGGTCTTTCAGTCAATGGCATTGGC...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACAGTGGCCAATGCCATTaGCTGAAAGACCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDSGQCH*LKDPRT
Trigger: AGTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACT...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGCTCCAGACTCTTGTaGTGCTTGGAGTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGSRLL*CLEWPM
Trigger: CATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATTCTGCAGAGTCAGGCTaGGGTGCAGTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHSAESG*GAVGCH
Trigger: GTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGA...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCTCTGCAGAGTCAGGCTaGGGTGCAGTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFSAESG*GAVGCH
Trigger: GTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGA...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGCTGGGCGAGAGCCTCTaGACTGCAGTTGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLALGESL*TAVGLT
Trigger: GGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAG...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGCTGGGCGAGAGCCTCTaGACTGCAGTTGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLLGESL*TAVGLT
Trigger: GGTCAGGCCAACTGCAGTTCAGAGGCTCTCGCCCAG...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTA +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQNMNPH*GSPGIL
Trigger: TAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTT...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAACGCAGTCCAAGAACATaGACCCCCATTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQRSPRT*TPIEEA
Trigger: GGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCG...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCATTTCCAGTTAAGGACTaGGGGCCCGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISFPVKD*GPAVQE
Trigger: TTCTTGGACTGCGGGCCCTCAGTCCTTAACTGGAAA...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAACTTTGGTCCAAGGTTaGCCCCCTCAAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQTLVQG*PPQAAW
Trigger: CCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGT...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATAGAAGAAGGGAGGGATaGCCTGCTGGACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHRRREG*PAGPQG
Trigger: GCCCTGGGGTCCAGCAGGTCATCCCTCCCTTCTTCT...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCGGGAGATTAGCCCAGTaGCTACAGGAACAAACGCCA +
Preference number: 4 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPGRLAQ*LQEQTP
Trigger: TGGCGTTTGTTCCTGTAGTCACTGGGCTAATCTCCC...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCTGGGGGCAGCGCCCATaGCGTTGTTGTTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSWGQRP*RCCCCS
Trigger: ACTGCAACAACAACAACGGCATGGGCGCTGCCCCCA...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGAGGCTGTCACTGTCCTaGAGGAGGCCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKRLSLS*RRPGEG
Trigger: CCCCTCCCCAGGCCTCCTGCAGGACAGTGACAGCCT...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTGGGCTCGCCCAGCATaGCGATGTACACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPWARPA*RCTLSP
Trigger: AGGTGACAGTGTACATCGGCATGCTGGGCGAGCCCA...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGTGGTCTCGCTGAAGTaGAGCCGCCCCACAGTCACC +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGVVSLK*SRPTVT
Trigger: GGTGACTGTGGGGCGGCTGCACTTCAGCGAGACCAC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAGGCACCTGTGCCCGCTaGCACAACACATCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAGTCAR*HNTSLS
Trigger: CGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCC...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGGTGTCGGGCACCTGTaGCCGCTGCCACAACACATC +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFGVGHL*PLPQHI
Trigger: GATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGTTGTCTGTCAGCTTaGACAGCTCCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLGCLSA*TAPSRP
Trigger: GGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACC...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGACTGAACTGGCTCCCTaGATGGCTGAAGGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRTELAP*MAEGAR
Trigger: TCGGGCGCCTTCAGCCATGCAGGGAGCCAGTTCAGT...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGCAATGATGGTTCCCTaGAGGAAGCGCTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQAMMVP*RKRWLM
Trigger: CATCAGCCAGCGCTTCCTGCAGGGAACCATCATTGC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFGDCRS*VVPKLW
Trigger: CCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGAACACATGTCCAAGGTaGGGACAGCAGAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLNTCPR*GQQNLG
Trigger: CCCCAGGTTCTGCTGTCCGCACCTTGGACATGTGTT...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAATTCTTGGCTTTGCCCTaGCCCCCAGGGAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQFLALP*PPGKGT
Trigger: AGTCCCCTTCCCTGGGGGGCAGGGCAAAGCCAAGAA...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTAGAGTCAGGCTGAGGTaGAGTGGGGTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPRVRLR*SGVPLL
Trigger: CAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCT...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGTCCCTGGTGTGGTGCTaGCTCAGGAGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGSLVWC*LRRAAQ
Trigger: CTGAGCTGCCCTCCTGAGGCAGCACCACACCAGGGA...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGTGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACAGGGGGAGAGCCGTCTaGCCTCCATTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHRGRAV*PPLTHG
Trigger: CCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCT...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATAGGGGGAGAGCCGTCTaGCCTCCATTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDRGRAV*PPLTHG
Trigger: CCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCT...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCACCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDRHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAAAGGGAGGGATGACCTaGTGGACCCCAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPKGGMT*WTPGQG
Trigger: TCCCTGCCCTGGGGTCCAGCAGGTCATCCCTCCCTT...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLVGGAL*TRRLLR
Trigger: CCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTAC...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTAAGCAGGCCCGGGGCTaGTTCCCTCACTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPKQARG*FPHCPP
Trigger: AGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGCTT...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGTCCGGCAGTGTGCCTaGGGCATAGGGAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLVRQCA*GIGSLG
Trigger: CCCAAGGCTCCCTATGCCCCAGGCACACTGCCGGAC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGGAGGGCACTCCCACGTaGCACAGTGTCTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGEGTPT*HSVSGV
Trigger: AACCCCTGAGACACTGTGCCACGTGGGAGTGCCCTC...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGTGGTGAAGATCAGTaGGCACCAGCCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHCGEDQ*APAPAP
Trigger: TGGGGCAGGGGCTGGTGCCCACTGATCTTCACCACA...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGTGCCAAGGCGGTGTCTaGACACGGGCAATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQCQGGV*TRAMLR
Trigger: TCTCAGCATTGCCCGTGTCCAGACACCGCCTTGGCA...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCACCTCTGGTCCGGGTTaGGCTTGCCCTTCTTACGCA +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSTSGPG*ACPSYA
Trigger: TGCGTAAGAAGGGCAAGCCCAACCCGGACCAGAGGT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCAGCATGAAGTACCTCTaGTCCGGGTTGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESSMKYL*SGLGLP
Trigger: GGGCAAGCCCAACCCGGACCAGAGGTACTTCATGCT...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGCTATGGTTTTCCCATTaGCAAAGACCATGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQLWFSH*QRPCLR
Trigger: CCGGAGACATGGTCTTTGCCAATGGGAAAACCATAG...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCTGGCTGATGCAGGCCTaGTCCGGAACCACGGACGAT +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAWLMQA*SGTTDD
Trigger: ATCGTCCGTGGTTCCGGACCAGGCCTGCATCAGCCA...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGTGCCTGGTAGCCCCGTaGTCAAGGGGGACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLACLVAP*SRGTVG
Trigger: TCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCA...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGATGACAGGGCAGGGGTaGCTGGAACACATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLMTGQG*LEHMSK
Trigger: CTTGGACATGTGTTCCAGCCACCCCTGCCCTGTCAT...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGACAGGGCAGGGGTaGCTGGAACACATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGMTGQG*LEHMSK
Trigger: CTTGGACATGTGTTCCAGCCACCCCTGCCCTGTCAT...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCGCTGGGGCTGGGACTTaGGCTGAGAACATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLAGAGT*AENMAR
Trigger: CCTGGCCATGTTCTCAGCCCAAGTCCCAGCCCCAGC...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCGAATTCTCCAGCACCTaGATGGAGGTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCEFSST*MEVREG
Trigger: GCCCTCCCTGACCTCCATCCAGGTGCTGGAGAATTC...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGCCTGGAGCACAGTACTaGGAGGTGATGGACATCGAA +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKPGAQY*EVMDIE
Trigger: TTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGG...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGG +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRQAEVQ*GATTDR
Trigger: CCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTG...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGGTGTGGAGACTCTGTaGAAGGCTCCCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQGVETL*KAPLLT
Trigger: TGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCGTGTCCTGGTGGGTGTaGAGACTCTGTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGVSWWV*RLCGRL
Trigger: GAGCCTTCCACAGAGTCTCCACACCCACCAGGACAC...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQGQDGY*PPVRGA
Trigger: GGCACCTCTCACCGGTGGCCAATAACCATCCTGTCC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCATTGCATCCAGTGTTaGGGGGTGCCTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWHCIQC*GVPGHP
Trigger: GGGGTGCCCAGGCACCCCCCAACACTGGATGCAATG...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQLPGYS*FKALGL
Trigger: AAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAG...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLPNPGS*WLGVGW
Trigger: CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGG...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATCCTAACCCAGGGTCTTaGTGGTTGGGAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHPNPGS*WLGVGW
Trigger: CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGG...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 4 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTAGGAATCCTATTACATaGAGTGGGGCTCGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGRNPIT*SGARQF
Trigger: AAACTGCCGAGCCCCACTCCATGTAATAGGATTCCT...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCAGGTCCGGCTTAAGGCAACTTTaGTCCAAGGTTGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLLGLDPSPLLISKVGRSGLRQL*SKVDPL
Trigger: GAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCC...GGACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACCAGGAGGATTTGCACTaGGAGGCCCTATGTACAGCT +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDQEDLH*EALCTA
Trigger: AGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTG...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGAACTGGGAGTTAACTaGGAAGTAGGGGGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISELGVN*EVGGAL
Trigger: TAGAGCGCCCCCTACTTCCCAGTTAACTCCCAGTTC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGGCTCTGGCTGGACCATaGGCACAAGGCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWALAGP*AQGLTP
Trigger: GGGAGTGAGGCCTTGTGCCCATGGTCCAGCCAGAGC...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGTCCCAAAGCTCTGGCTaGACCATGGGCACAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLSQSSG*TMGTRP
Trigger: AGGCCTTGTGCCCATGGTCCAGCCAGAGCTTTGGGA...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCGTGGTCCCAAAGCTCTaGCTGGACCATGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGVVPKL*LDHGHK
Trigger: CTTGTGCCCATGGTCCAGCCAGAGCTTTGGGACCAC...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAGGTCAGGGAGGGCACTaGCTCTGCAAGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPGQGGH*LCKERG
Trigger: GCCTCTCTCCTTGCAGAGCCAGTGCCCTCCCTGACC...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000675319.1
3UTR CAA 72 bp GGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTALRGRAVCPP*THGGPPKSLRA
Trigger: AGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGGGGCCACCACCAGCATaGAGTACCTCTGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKGPPPA*STSGPG
Trigger: ACCCGGACCAGAGGTACTTCATGCTGGTGGTGGCCC...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCACACAATGATGCGCTCTaGGATCTGGGCGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAHNDAL*DLGGQR
Trigger: ACGCTGGCCGCCCAGATCTCAGAGCGCATCATTGTG...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCTGGAGGCCCGCACAATaGTGCGCTCTGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLWRPAQ*CALRSG
Trigger: CCCAGATCTCAGAGCGCATCATTGTGCGGGCCTCCA...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCAGCTGCCGGTGGACTTaGGGCTGTCGAGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVASCRWT*GCRAAA
Trigger: TGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCT...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCAGGAAGCGCTGGCTaGTGCAGGCCTGGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGAGSAG*CRPGPE
Trigger: TTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR TCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTTCTGCAGAGTCAGGCTaGGGTGCAGTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPSAESG*GAVGCH
Trigger: GTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGA...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGACATGGTTCCTCCTTTaGCCTCAGGCTGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQTWFLL*PQAAQH
Trigger: GTGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGT...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCACATGGTTCCTCCTTTaGCCTCAGGCTGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPTWFLL*PQAAQH
Trigger: GTGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGT...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGCGCAGTCCAAGAACATaGACCCCCATTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLRSPRT*TPIEEA
Trigger: GGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCG...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCTGCCGTTGTTGTTGTTaGAGTTCAGCGGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLCRCCC*SSAGCR
Trigger: ACGGCACCCCGCTGAACTGCAACAACAACAACGGCA...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCGGTCCGGGTTGGGCTTaGCCTTCTTACGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGGPGWA*PSYACC
Trigger: ACAACATGCGTAAGAAGGGCAAGCCCAACCCGGACC...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATACCTTGACATTCCCGTaGACAACCAGCGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHTLTFP*TTSASS
Trigger: GGATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGT...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCACCTTGACATTCCCGTaGACAACCAGCGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESTLTFP*TTSASS
Trigger: GGATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGT...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCACCTTGACATTCCCGTaGACAACCAGCGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLTLTFP*TTSASS
Trigger: GGATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGT...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGTGGTGTCCACCTCCTaGACGTGTTCCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLVVSTS*TCSLAR
Trigger: GCGCGCCAAGGAACACGTGCAGGAGGTGGACACCAC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCGCAATGATGGTTCCCTaGAGGAAGCGCTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLAMMVP*RKRWLM
Trigger: CATCAGCCAGCGCTTCCTGCAGGGAACCATCATTGC...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGGCAAAGAGGGCTGTATaGCTGGTAGCCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGAKRAV*LVAPWS
Trigger: TGACCACGGGGCTACCAGGCATACAGCCCTCTTTGC...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCATTCTTGGCTTTGCCCTaGCCCCCAGGGAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAFLALP*PPGKGT
Trigger: AGTCCCCTTCCCTGGGGGGCAGGGCAAAGCCAAGAA...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGAGAGTCAGGCTGAGGTaGAGTGGGGTGCCACTACTG +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKRVRLR*SGVPLL
Trigger: CAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCT...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCGAGGAGGAGTTCATCTaGAGAGTCAGGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGEEEFI*RVRLRC
Trigger: GCACCTCAGCCTGACTCTGCAGATGAACTCCTCCTC...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGAGGAGGAGTTCATCTaGAGAGTCAGGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLEEEFI*RVRLRC
Trigger: GCACCTCAGCCTGACTCTGCAGATGAACTCCTCCTC...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTGCCACCGGTGAGAGGTaGCCTGGGTGTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIATGER*PGCPGG
Trigger: CCCACCAGGACACCCAGGGCACCTCTCACCGGTGGC...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAGCCACCGGTGAGAGGTaGCCTGGGTGTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIATGER*PGCPGG
Trigger: CCCACCAGGACACCCAGGGCACCTCTCACCGGTGGC...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGGCCTGACCCAGCAGTaGCACCCGGAAGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLGLTQQ*HPEVVG
Trigger: ACCTACCACTTCCGGGTGGCACTGCTGGGTCAGGCC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGTGGTCCCTGGTGTGGTaGTGCCTCAGGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKWSLVW*CLRRAA
Trigger: AGCTGCCCTCCTGAGGCAGCACCACACCAGGGACCA...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCTCAGGTTCCCTCTGTaGCGTGAGGGGCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLLRFPL*REGRPA
Trigger: AGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAG...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGAGGGGGAGAGCCGTCTaGCCTCCATTGACTCATGGG +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWRGRAV*PPLTHG
Trigger: CCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCT...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACCAGCCAAGACCAGGCTaGTGCTTGAGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHQPRPG*CLRDSC
Trigger: GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTG...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGGACAGGGGCAAGGCCTaGTTCCCAAAGAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLADRGKA*FPKRWQ
Trigger: CTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCTGTC...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCGGAGCAAGCTATCCCTaGTATTCCTGCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESGASYP*YSCIPL
Trigger: CAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCC...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGVGGAL*TRRLLR
Trigger: CCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTAC...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGATGTCGTGGCCTGCTaGAAGCCAGTGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFDVVAC*KPVHPA
Trigger: GGCAGGATGCACTGGCTTCCAGCAGGCCACGACATC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR CCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACAGTAGGAGGCCGAGCTaGCTGGAGCAGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHSRRPS*LEQRCQ
Trigger: CTGACATCTCTGCTCCAGCCAGCTCGGCCTCCTACT...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGCTCGGAGCCCGAGTCTaGGGGAGAGTCCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVLGARV*GRVRQC
Trigger: ACACTGCCGGACTCTCCCCCAGACTCGGGCTCCGAG...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCATCGTGCGCAGGAGGTaGGGCTCATTCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGIVRRR*GSFTCW
Trigger: CCAGCAGGTGAATGAGCCCCACCTCCTGCGCACGAT...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGATCGTGCGCAGGAGGTaGGGCTCATTCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGIVRRR*GSFTCW
Trigger: CCAGCAGGTGAATGAGCCCCACCTCCTGCGCACGAT...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATGCCTGGCAAGTGGGCTaGAGGTGGGGGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYAWQVG*RWGRML
Trigger: GAGCATCCGCCCCCACCTCCAGCCCACTTGCCAGGC...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGTGTGGTGAAGATCAGTaGGCACCAGCCCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLACGEDQ*APAPAP
Trigger: TGGGGCAGGGGCTGGTGCCCACTGATCTTCACCACA...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCAAGTGGTTCTTCTTCTaGCACACAAAGGCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCKWFFF*HTKASS
Trigger: CGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTT...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGACCTCTGGTCCGGGTTaGGCTTGCCCTTCTTACGCA +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRTSGPG*ACPSYA
Trigger: TGCGTAAGAAGGGCAAGCCCAACCCGGACCAGAGGT...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGCTCTCGAACTGGCCTaGGTTGGAGGCCCGCACAAT +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFALELA*VGGPHN
Trigger: ATTGTGCGGGCCTCCAACCCAGGCCAGTTCGAGAGC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGCTGTCGCTCTCGAACTaGCCTGGGTTGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGLSLSN*PGLEAR
Trigger: GCGGGCCTCCAACCCAGGCCAGTTCGAGAGCGACAG...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTCTTCAATTGCTCGGTaGTGTCCACCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLSSIAR*CPPPAR
Trigger: ACGTGCAGGAGGTGGACACCACCGAGCAATTGAAGA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTCTTCAATTGCTCGGTaGTGTCCACCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTSSIAR*CPPPAR
Trigger: ACGTGCAGGAGGTGGACACCACCGAGCAATTGAAGA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGAAGGGCCATCTGGCTaGGGCCTGAGCGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVEGPSG*GLSGWC
Trigger: GCACCAACCGCTCAGGCCCCAGCCAGATGGCCCTTC...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGGCAGAAGGGCCATCTaGCTGGGGCCTGAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWGRRAI*LGPERL
Trigger: CAACCGCTCAGGCCCCAGCCAGATGGCCCTTCTGCC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACACATGGAAACCAAGGCTaGGACTGTTCTTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTHGNQG*DCSWLC
Trigger: GCAAAGCCAAGAACAGTCCCAGCCTTGGTTTCCATG...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTCGGCGGGCCCGGCCATaGAAACCAAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIRRARP*KPRLGL
Trigger: CAGTCCCAGCCTTGGTTTCCATGGCCGGGCCCGCCG...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTCCAGCACCTGGATaGAGGTCAGGGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISSPAPG*RSGRAL
Trigger: CAGTGCCCTCCCTGACCTCCATCCAGGTGCTGGAGA...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCCTGCAGGCATCCCCTaGAGCACAGTACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHPAGIP*STVLGG
Trigger: ACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATGTGTCCTGGTGGGTGTaGAGACTCTGTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDVSWWV*RLCGRL
Trigger: GAGCCTTCCACAGAGTCTCCACACCCACCAGGACAC...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGGACAGGATGGTTATTaGCCACCGGTGAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAGQDGY*PPVRGA
Trigger: GGCACCTCTCACCGGTGGCCAATAACCATCCTGTCC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTCACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQSEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCAGTGAACAGCAGAGCTaGCCTGCAGCGGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLASEQQS*PAAGSS
Trigger: ACTGGAGCCCGCTGCAGGCCAGCTCTGCTGTTCACT...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACATCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCCTTGGTGGTTGGGAGTaGGATGGGTGTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLALGGWE*DGCRRL
Trigger: GAGCCTCCGACACCCATCCCACTCCCAACCACCAAG...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGTCCCTTTCCCATTTCTaGACCCATGGCAGACATGGC +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRSLSHF*THGRHG
Trigger: GCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGA...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPASRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCTCAGAGTCAGAGTTaGCACATGACAAATACCAAG +
Preference number: 4 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWPQSQS*HMTNTK
Trigger: CTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGG...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGGCTCTGGCTGGACCATaGGCACAAGGCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKALAGP*AQGLTP
Trigger: GGGAGTGAGGCCTTGTGCCCATGGTCCAGCCAGAGC...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGCTCTGGCTGGACCATaGGCACAAGGCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPALAGP*AQGLTP
Trigger: GGGAGTGAGGCCTTGTGCCCATGGTCCAGCCAGAGC...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCACGCCCACCGAAAAGTTaGAGCCCTTGTCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVARPPKS*SPCPHP
Trigger: TGGATGCGGACAAGGGCTTCAACTTTTCGGTGGGCG...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCGCTTGCTCCGGTCTaGCTGGGACTGCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLPLAPV*LGLLDV
Trigger: AACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGG...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTCCACAGTCACCTTCGTaGCCTGCTCAGGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPPQSPS*PAQGAD
Trigger: ATCTGCCCCCTGAGCAGGTCACGAAGGTGACTGTGG...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGATCTCCTTCACCTCCTaGGCGATGACACCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQISFTS*AMTPVS
Trigger: AGAGACAGGTGTCATCGCTCAGGAGGTGAAGGAGAT...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTAGTGGCCAATGCCATTaGCTGAAAGACCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPSGQCH*LKDPRT
Trigger: AGTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACT...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGAGTGGCCAATGCCATTaGCTGAAAGACCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLSGQCH*LKDPRT
Trigger: AGTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACT...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTA +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLNMNPH*GSPGIL
Trigger: TAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTT...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCTTTCCAGTTAAGGACTaGGGGCCCGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLFPVKD*GPAVQE
Trigger: TTCTTGGACTGCGGGCCCTCAGTCCTTAACTGGAAA...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTTTTCCAGTTAAGGACTaGGGGCCCGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSFPVKD*GPAVQE
Trigger: TTCTTGGACTGCGGGCCCTCAGTCCTTAACTGGAAA...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGGGGAGATTAGCCCAGTaGCTACAGGAACAAACGCCA +
Preference number: 4 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALGRLAQ*LQEQTP
Trigger: TGGCGTTTGTTCCTGTAGTCACTGGGCTAATCTCCC...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCTGGGGGCAGCGCCCATaGCGTTGTTGTTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGWGQRP*RCCCCS
Trigger: ACTGCAACAACAACAACGGCATGGGCGCTGCCCCCA...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGTCTCAGGGGTTATCGTaGGCAGGAGGTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGSQGLS*AGGGAH
Trigger: ATGAGCCCCACCTCCTGCGCACGATAACCCCTGAGA...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAGGGGCTCGAGTGGGGTaGAGAGGCAGGGCTGTCACG +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEGARVG*RGRAVT
Trigger: CGTGACAGCCCTGCCTCTGCACCCCACTCGAGCCCC...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGTGGGCTCGCCCAGCATaGCGATGTACACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAWARPA*RCTLSP
Trigger: AGGTGACAGTGTACATCGGCATGCTGGGCGAGCCCA...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGGCACCTGTGCCCGCTaGCACAACACATCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGGTCAR*HNTSLS
Trigger: CGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGAGTGCACCAGCCGCATaGGCGAGATCCTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQSAPAA*ARSSSI
Trigger: AATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACT...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCAGTGCACCAGCCGCATaGGCGAGATCCTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLSAPAA*ARSSSI
Trigger: AATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACT...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGGCAAAGAGGGCTGTATaGCTGGTAGCCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWAKRAV*LVAPWS
Trigger: TGACCACGGGGCTACCAGGCATACAGCCCTCTTTGC...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGTTCTTGGCTTTGCCCTaGCCCCCAGGGAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKFLALP*PPGKGT
Trigger: AGTCCCCTTCCCTGGGGGGCAGGGCAAAGCCAAGAA...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGAGGAGGAGTTCATCTaGAGAGTCAGGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALREEEFI*RVRLRC
Trigger: GCACCTCAGCCTGACTCTGCAGATGAACTCCTCCTC...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCCCTTTGACCTCAGGCTaGACAGCACCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLPLTSG*TAPQTR
Trigger: CCGTGTCTGTGGTGCTGTGCAGCCTGAGGTCAAAGG...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCCCTTTGACCTCAGGCTaGACAGCACCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISPLTSG*TAPQTR
Trigger: CCGTGTCTGTGGTGCTGTGCAGCCTGAGGTCAAAGG...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGCGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCCGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCACGGTTTTGGGGCTGTaGTGTGTCCAGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISTVLGL*CVQMGS
Trigger: GGAGCCCATCTGGACACAGCACAGCCCCAAAACCGT...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISVGGAL*TRRLLR
Trigger: CCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTAC...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAAAGCAGGCCCGGGGCTaGTTCCCTCACTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIKQARG*FPHCPP
Trigger: AGGTGGGCAGTGAGGGAAGCAGCCCCGGGCCTGCTT...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATGCTGGTGTCTATGTTaGAGGGCTCCAGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGCWCLC*RAPGHR
Trigger: ACGGTGCCCTGGAGCCCTCCAACATAGACACCAGCA...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCACTCCTCCAGGATGCTaGTGTCTATGTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLTPPGC*CLCWRA
Trigger: AGCCCTCCAACATAGACACCAGCATCCTGGAGGAGT...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGAGTAGGAGGCCGAGCTaGCTGGAGCAGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLSRRPS*LEQRCQ
Trigger: CTGACATCTCTGCTCCAGCCAGCTCGGCCTCCTACT...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACCAAGTGGGCTGGAGGTaGGGGCGGATGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNQVGWR*GRMLQA
Trigger: CGCCTGGAGCATCCGCCCCCACCTCCAGCCCACTTG...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCATTCCATTCAGCATCTaGGCATTGAGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGIPFSI*ALRVLG
Trigger: CCCCAGCACCCTCAATGCCCAGATGCTGAATGGAAT...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATACCCTGCAGGAAGCGCTaGCTGATGCAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIPCRKR*LMQAWS
Trigger: GGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGG...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAGGCTCTGACTGGCCCTaGGCCCAGGTGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEGSDWP*AQVGSA
Trigger: TGCTGAGCCCACCTGGGCCCAGGGCCAGTCAGAGCC...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000675345.1
CDS-3UTR CCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGAATTCTCCAGCACCTaGATGGAGGTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGEFSST*MEVREG
Trigger: GCCCTCCCTGACCTCCATCCAGGTGCTGGAGAATTC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAGAATTCTCCAGCACCTaGATGGAGGTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAEFSST*MEVREG
Trigger: GCCCTCCCTGACCTCCATCCAGGTGCTGGAGAATTC...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGAATTCTCCAGCACCTaGATGGAGGTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAEFSST*MEVREG
Trigger: GCCCTCCCTGACCTCCATCCAGGTGCTGGAGAATTC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGGTGTGGAGACTCTGTaGAAGGCTCCCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFGVETL*KAPLLT
Trigger: TGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGGTGTGGAGACTCTGTaGAAGGCTCCCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAGVETL*KAPLLT
Trigger: TGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGTGTCCTGGTGGGTGTaGAGACTCTGTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQVSWWV*RLCGRL
Trigger: GAGCCTTCCACAGAGTCTCCACACCCACCAGGACAC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAGTGTCCTGGTGGGTGTaGAGACTCTGTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAVSWWV*RLCGRL
Trigger: GAGCCTTCCACAGAGTCTCCACACCCACCAGGACAC...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATCACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGACCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAGGCACCCCTGGTCCCTaGTGTGGTGCTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIGTPGP*CGAASG
Trigger: TCCTGAGGCAGCACCACACCAGGGACCAGGGGTGCC...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGCTTACCTGGCCCACTaGCCCCTACTGGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLAYLAH*PLLVQA
Trigger: GGCCTGAACCAGTAGGGGCCAGTGGGCCAGGTAAGC...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGCTCTAGGGCTTACCTaGCCCACTGGCCCCTACTGG +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVALGLT*PTGPYW
Trigger: CCAGTAGGGGCCAGTGGGCCAGGTAAGCCCTAGAGC...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRGRSMHTQASKGARYGQLPGYS*FKALGL
Trigger: AAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAG...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCTCCCTTTCCCATTTCTaGACCCATGGCAGACATGGC +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSSLSHF*THGRHG
Trigger: GCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGA...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGAATTGGGGAGGGGGCTaGGAGCAAGCTATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLANWGGG*EQAIPA
Trigger: AGCAGGGATAGCTTGCTCCCAGCCCCCTCCCCAATT...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTGGTGCTGCCTCAGGAGGGCAGCTCAGTCACACAGGCGGTAGAAGTGGAAGTGAGGAATCCTATTACATaGAGTGGGGCTCGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VVLPQEGSSVTQAVEVEVRNPIT*SGARQF
Trigger: AAACTGCCGAGCCCCACTCCATGTAATAGGATTCCT...CACTTCCACTTCTACCGCCTGTGTGACTGAGCTGCCCTCCTGAGGCAGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCTCCAGATGGGCTCCATaGGGCAGTGGACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGSRWAP*GSGRSL
Trigger: AAGTGACCGTCCACTGCCCCATGGAGCCCATCTGGA...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTGGCTTAAGGCAACTTTaGTCCAAGGTTGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSGLRQL*SKVDPL
Trigger: GAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCC...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCCAGGAGGATTTGCACTaGGAGGCCCTATGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCQEDLH*EALCTA
Trigger: AGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTG...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCAGGAGGATTTGCACTaGGAGGCCCTATGTACAGCT +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPQEDLH*EALCTA
Trigger: AGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTG...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTCCAGGAGACAGGAAGTaGACACGGCAAAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSPGDRK*TRQKSH
Trigger: ATGGCTCTTTTGCCGTGTCCACTTCCTGTCTCCTGG...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCCAGGAGACAGGAAGTaGACACGGCAAAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESPGDRK*TRQKSH
Trigger: ATGGCTCTTTTGCCGTGTCCACTTCCTGTCTCCTGG...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCTCCCAAAGCTCTGGCTaGACCATGGGCACAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFSQSSG*TMGTRP
Trigger: AGGCCTTGTGCCCATGGTCCAGCCAGAGCTTTGGGA...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATACGCAGTCCTGGGGTCTaGGTGTCCTGGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIRSPGV*VSWWVW
Trigger: CCACACCCACCAGGACACCCAGACCCCAGGACTGCG...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675792.1
CDS-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAACGGCCGTCGCAGTCCTaGGGTCTGGGTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASERPSQS*GLGVLV
Trigger: CACCAGGACACCCAGACCCCAGGACTGCGACGGCCG...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675792.1
CDS-3UTR TCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAGATGAGGCTGCCACTTaGTGGACTGGTAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPDEAAT*WTGSWG
Trigger: ACCCCAACTACCAGTCCATCAAGTGGCAGCCTCATC...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATCCCCTACGTTCTCCATaGAGATGCGCTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDPLRSP*RCAPCS
Trigger: TGAACAAGGAGCGCATCTTCATGGAGAACGTAGGGG...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGAGGGTTGGTAGTGGGTaGGGAACAGCAGATGACAGG +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWRVGSG*GTADDR
Trigger: CCTGTCATCTGCTGTTCCTCACCCACTACCAACCCT...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCGGCTCCAGACTCTTGTaGTGCTTGGAGTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGGSRLL*CLEWPM
Trigger: CATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCC...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGGGCTCCAGACTCTTGTaGTGCTTGGAGTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWGSRLL*CLEWPM
Trigger: CATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCC...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLHSTGR*WTSNSP
Trigger: TGGAGAATTCGATGTCCATCACCTCCCAGTACTGTG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAGTTCCCTCTGTGCCGTaGGGGGCGACCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEVPSVP*GATSWN
Trigger: GTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAAC...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATAGAAGAAGGGAGGGATaGCCTGCTGGACCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYRRREG*PAGPQG
Trigger: GCCCTGGGGTCCAGCAGGTCATCCCTCCCTTCTTCT...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCGTCAGAGTTGGCACATaGCAAATACCAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGVRVGT*QIPSSG
Trigger: CCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGAC...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATCGGTCTGACTGGGACTaGTCGATGTTAATGGACTGG +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDRSDWD*SMLMDW
Trigger: CCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCG...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAGTGGTCTCGCTGAAGTaGAGCCGCCCCACAGTCACC +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIVVSLK*SRPTVT
Trigger: GGTGACTGTGGGGCGGCTGCACTTCAGCGAGACCAC...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGGTCCGGGTTGGGCTTaGCCTTCTTACGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGGPGWA*PSYACC
Trigger: ACAACATGCGTAAGAAGGGCAAGCCCAACCCGGACC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTGGTGTCGGGCACCTGTaGCCGCTGCCACAACACATC +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIGVGHL*PLPQHI
Trigger: GATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACC...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGGAGATCCTCTTCAATTaGTCGGTGGTGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKEILFN*SVVSTS
Trigger: GGAGGTGGACACCACCGAGCAATTGAAGAGGATCTC...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCGCAATGATGGTTCCCTaGAGGAAGCGCTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLAMMVP*RKRWLM
Trigger: CATCAGCCAGCGCTTCCTGCAGGGAACCATCATTGC...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGAGGAGGAGTTCATCTaGAGAGTCAGGCTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAEEEFI*RVRLRC
Trigger: GCACCTCAGCCTGACTCTGCAGATGAACTCCTCCTC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCCCTGGTGTGGTGCTaGCTCAGGAGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVASLVWC*LRRAAQ
Trigger: CTGAGCTGCCCTCCTGAGGCAGCACCACACCAGGGA...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTTATCCTGAGGACAAGTaGTTTGAGATCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGYPEDK*FEINGK
Trigger: TTTGCCATTGATCTCAAAGCACTTGTCCTCAGGATA...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGGGAGCAAGCTATCCCTaGTATTCCTGCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGGASYP*YSCIPL
Trigger: CAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCC...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGGAGCAAGCTATCCCTaGTATTCCTGCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAGASYP*YSCIPL
Trigger: CAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGGAGCAAGCTATCCCTaGTATTCCTGCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLGASYP*YSCIPL
Trigger: CAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCC...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATACCTGTCCCCAACTCCTaGACTGAGGAACCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIPVPNS*TEEPLP
Trigger: GGGGAGGGGTTCCTCAGTGCAGGAGTTGGGGACAGG...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGGAGGCCGAGCTGGCTaGAGCAGAGATGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGGGRAG*SRDVRE
Trigger: TTCCCTGACATCTCTGCTCCAGCCAGCTCGGCCTCC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTTGCTCCGGTCTGACTaGGACTGCTCGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGLLRSD*DCSMLM
Trigger: CATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAA...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCTTGCTCCGGTCTGACTaGGACTGCTCGATGTTAATG +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGLLRSD*DCSMLM
Trigger: CATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAA...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATAACTGGCTCCCTGCATaGCTGAAGGCGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYNWLPA*LKAPEL
Trigger: CAGCTCGGGCGCCTTCAGCCATGCAGGGAGCCAGTT...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVTVGAA*SQSSGW
Trigger: CCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGT...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAATGACAGGGCAGGGGTaGCTGGAACACATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAMTGQG*LEHMSK
Trigger: CTTGGACATGTGTTCCAGCCACCCCTGCCCTGTCAT...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCATGGAAACCAAGGCTaGGACTGTTCTTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLHGNQG*DCSWLC
Trigger: GCAAAGCCAAGAACAGTCCCAGCCTTGGTTTCCATG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGTCTCCAGCACCTGGATaGAGGTCAGGGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGSPAPG*RSGRAL
Trigger: CAGTGCCCTCCCTGACCTCCATCCAGGTGCTGGAGA...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGACACGGAAGGACAGGATaGTTATTGGCCACCGGTGAG +
Preference number: 4 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGHGRTG*LLATGE
Trigger: CTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTG...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVAGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCATCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACATCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: KSLALRFPLCREGRPAGTSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPGISSS*IFLVQG
Trigger: GCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCC...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACCCATTTCTGGACCCATaGCAGACATGGCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDPFLDP*QTWLNE
Trigger: TTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGG...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCACCATTTCTGGACCCATaGCAGACATGGCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISPFLDP*QTWLNE
Trigger: TTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGG...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGTCCCTTTCCCATTTCTaGACCCATGGCAGACATGGC +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRSLSHF*THGRHG
Trigger: GCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGA...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTGCTTCCCAAAGAGGTaGCAGCATACCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDCFPKR*QHTTGQ
Trigger: TTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 4 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLSYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCTCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTSYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGAATCCTATTACATaGAGTGGGGCTCGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQRNPIT*SGARQF
Trigger: AAACTGCCGAGCCCCACTCCATGTAATAGGATTCCT...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGGGCTCCATGGGGCAGTaGACGGTCACTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWGSMGQ*TVTFQL
Trigger: TAACTGGAAAGTGACCGTCCACTGCCCCATGGAGCC...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGGCTTAAGGCAACTTTaGTCCAAGGTTGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAGLRQL*SKVDPL
Trigger: GAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTAGGCATCCTCCTTGCTaGTGTACTCCTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLRHPPC*CTPPGC
Trigger: GCATCCTGGAGGAGTACATCAGCAAGGAGGATGCCT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR TCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTCATCCACGCGGTAGGTaGGCATGGGCAGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIHPRGR*AWAAPC
Trigger: ACAAGGAGCTGCCCATGCTCACCTACCGCGTGGATG...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCCCCTACGTTCTCCATaGAGATGCGCTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWPLRSP*RCAPCS
Trigger: TGAACAAGGAGCGCATCTTCATGGAGAACGTAGGGG...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGCCAATGCCATTGACTaGAAGACCCCAGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLANAID*KTPGLG
Trigger: GCCAAGTCCTGGGGTCTTTCAGTCAATGGCATTGGC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTACATGGTTCCTCCTTTaGCCTCAGGCTGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLTWFLL*PQAAQH
Trigger: GTGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGTTATTGGCCACCGGTaGGAGGTGCCCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNVIGHR*EVPWVS
Trigger: GGACACCCAGGGCACCTCTCACCGGTGGCCAATAAC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: SESEPCLCKCHTPALAHSTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATATCCGAGCCCCCTGCTaGTCTCAAAGGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYIRAPC*SQRWAG
Trigger: ACCTGCCCACCTTTGAGATCAGCAGGGGGCTCGGAT...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAACCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGCAGGAACGCAGGCAGTaGAGCTGCAATACCATCTGG +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKQERRQ*SCNTIW
Trigger: CCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTG...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCTTTCCAGTTAAGGACTaGGGGCCCGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLFPVKD*GPAVQE
Trigger: TTCTTGGACTGCGGGCCCTCAGTCCTTAACTGGAAA...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCGGGAGATTAGCCCAGTaGCTACAGGAACAAACGCCA +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISGRLAQ*LQEQTP
Trigger: TGGCGTTTGTTCCTGTAGTCACTGGGCTAATCTCCC...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAGCTCCAGGGCACCGTTaGTGTCGTGGCCTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIAPGHR*CRGLRR
Trigger: TCTTCGAAGGCCACGACATCAACGGTGCCCTGGAGC...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278836.10
CDS-3UTR TCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGCAGACTCGGCTGTTCTaGGGCTCTGCGGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVQTRLF*GSAGDS
Trigger: AGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTG...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR GCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTTGCCGTTGTTGTTGTTaGAGTTCAGCGGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPCRCCC*SSAGCR
Trigger: ACGGCACCCCGCTGAACTGCAACAACAACAACGGCA...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCGGTCTGACTGGGACTaGTCGATGTTAATGGACTGG +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHRSDWD*SMLMDW
Trigger: CCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCG...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGACGGTCTGACTGGGACTaGTCGATGTTAATGGACTGG +
Preference number: 4 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGRSDWD*SMLMDW
Trigger: CCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCG...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGTGGTCTCGCTGAAGTaGAGCCGCCCCACAGTCACC +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNVVSLK*SRPTVT
Trigger: GGTGACTGTGGGGCGGCTGCACTTCAGCGAGACCAC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGTAGGGGGCGCTCTATaGACACGCAGGCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWVGGAL*TRRLLR
Trigger: CCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTAC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGTCAGGACAGACTGCTaGCCTTATCCCAACCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHVRTDC*PYPNQH
Trigger: ATGCTGGTTGGGATAAGGGCAGCAGTCTGTCCTGAC...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCATTCCATTCAGCATCTaGGCATTGAGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLIPFSI*ALRVLG
Trigger: CCCCAGCACCCTCAATGCCCAGATGCTGAATGGAAT...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCAAGTGGTTCTTCTTCTaGCACACAAAGGCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAKWFFF*HTKASS
Trigger: CGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTT...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCACTGTCACCTGGAAGTaGTTCTTCTTCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSTVTWK*FFFWHT
Trigger: TGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGAGCATGAAGTACCTCTaGTCCGGGTTGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVSMKYL*SGLGLP
Trigger: GGGCAAGCCCAACCCGGACCAGAGGTACTTCATGCT...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCGCTCTCGAACTGGCCTaGGTTGGAGGCCCGCACAAT +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAALELA*VGGPHN
Trigger: ATTGTGCGGGCCTCCAACCCAGGCCAGTTCGAGAGC...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAGCTCTCGAACTGGCCTaGGTTGGAGGCCCGCACAAT +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIALELA*VGGPHN
Trigger: ATTGTGCGGGCCTCCAACCCAGGCCAGTTCGAGAGC...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGCCTGGAGCACAGTACTaGGAGGTGATGGACATCGAA +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGPGAQY*EVMDIE
Trigger: TTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGG...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCCCTGGAGCACAGTACTaGGAGGTGATGGACATCGAA +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLPGAQY*EVMDIE
Trigger: TTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGG...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCGGAAGTGGTAGTCTGTaGCTGGCTGGGCGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAGSGSL*LAGREP
Trigger: AGGCTCTCGCCCAGCCAGCCACAGACTACCACTTCC...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCGGAGGCAAGGGAGAATaGGCTCTGAACAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLAGGKGE*ALNKSG
Trigger: CCCTGATTTGTTCAGAGCCCATTCTCCCTTGCCTCC...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQLPGYS*FKALGL
Trigger: AAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAG...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 4 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGTGGGCGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 4 (lower is better)
Translates to: HPSLLGLDPSPLLISKVGDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...GCCCACCTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 4 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCTCCCTTTCCCATTTCTaGACCCATGGCAGACATGGC +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGSLSHF*THGRHG
Trigger: GCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGA...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 4 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCGGCTTAAGGCAACTTTaGTCCAAGGTTGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGGLRQL*SKVDPL
Trigger: GAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCC...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCCAGGAGGATTTGCACTaGGAGGCCCTATGTACAGCT +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGQEDLH*EALCTA
Trigger: AGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTG...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCCCAGGAGACAGGAAGTaGACACGGCAAAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLPGDRK*TRQKSH
Trigger: ATGGCTCTTTTGCCGTGTCCACTTCCTGTCTCCTGG...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTATCTCCTTCACCTCCTaGGCGATGACACCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLISFTS*AMTPVS
Trigger: AGAGACAGGTGTCATCGCTCAGGAGGTGAAGGAGAT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGAGGGTTGGTAGTGGGTaGGGAACAGCAGATGACAGG +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGRVGSG*GTADDR
Trigger: CCTGTCATCTGCTGTTCCTCACCCACTACCAACCCT...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR TCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGCCAATGCCATTGACTaGAAGACCCCAGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWANAID*KTPGLG
Trigger: GCCAAGTCCTGGGGTCTTTCAGTCAATGGCATTGGC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFHSTGR*WTSNSP
Trigger: TGGAGAATTCGATGTCCATCACCTCCCAGTACTGTG...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGHSTGR*WTSNSP
Trigger: TGGAGAATTCGATGTCCATCACCTCCCAGTACTGTG...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATCCGTCTGCCCTCCATTaGCTCATGGGGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNPSALH*LMGVHP
Trigger: TGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGG...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTA +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISNMNPH*GSPGIL
Trigger: TAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTT...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTCGCAGTCCAAGAACATaGACCCCCATTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLRSPRT*TPIEEA
Trigger: GGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCG...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGGGAGATTAGCCCAGTaGCTACAGGAACAAACGCCA +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLGRLAQ*LQEQTP
Trigger: TGGCGTTTGTTCCTGTAGTCACTGGGCTAATCTCCC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGGTCAGAGTTGGCACATaGCAAATACCAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAVRVGT*QIPSSG
Trigger: CCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGAC...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGTCAGAGTTGGCACATaGCAAATACCAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQVRVGT*QIPSSG
Trigger: CCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGAC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTGTACTCCTCCAGGATaGTGGTGTCTATGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISCTPPG*WCLCWR
Trigger: CCTCCAACATAGACACCAGCATCCTGGAGGAGTACA...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTTCTCAGGGGTTATCGTaGGCAGGAGGTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCISQGLS*AGGGAH
Trigger: ATGAGCCCCACCTCCTGCGCACGATAACCCCTGAGA...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCGCAAAGAGGGCTGTATaGCTGGTAGCCCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAAKRAV*LVAPWS
Trigger: TGACCACGGGGCTACCAGGCATACAGCCCTCTTTGC...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCCCTTTGACCTCAGGCTaGACAGCACCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAPLTSG*TAPQTR
Trigger: CCGTGTCTGTGGTGCTGTGCAGCCTGAGGTCAAAGG...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCCGAGAGCCTCTGAACTaGAGTTGGCCTGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAREPLN*SWPDPA
Trigger: TGCTGGGTCAGGCCAACTGCAGTTCAGAGGCTCTCG...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACACAGCAGAGCTGGCCTaGAGCGGGCTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNTAELA*SGLQCN
Trigger: GTTACACTGGAGCCCGCTGCAGGCCAGCTCTGCTGT...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGTGCTTGAGGGATTCCTaGTCCTCTGCTCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQCLRDS*SSAQRE
Trigger: TTCTCTCTGAGCAGAGGAGCAGGAATCCCTCAAGCA...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGTATCCTGAGGACAAGTaGTTTGAGATCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKYPEDK*FEINGK
Trigger: TTTGCCATTGATCTCAAAGCACTTGTCCTCAGGATA...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGGAGCAAGCTATCCCTaGTATTCCTGCATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGGASYP*YSCIPL
Trigger: CAGGGGGATGCAGGAATAGCAGGGATAGCTTGCTCC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR GCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCACGGTTTTGGGGCTGTaGTGTGTCCAGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVATVLGL*CVQMGS
Trigger: GGAGCCCATCTGGACACAGCACAGCCCCAAAACCGT...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAAGACACTCACACCATTaGCAGCCGGGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASERHSHH*QPGSWQ
Trigger: CTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCT...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAGAGGGCACTCCCACGTaGCACAGTGTCTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEEGTPT*HSVSGV
Trigger: AACCCCTGAGACACTGTGCCACGTGGGAGTGCCCTC...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CCA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGATGTACACTGTCACCTaGAAGTGGTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLMYTVT*KWFFFW
Trigger: CCAGAAGAAGAACCACTTCCAGGTGACAGTGTACAT...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATAGCATGAAGTACCTCTaGTCCGGGTTGGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYSMKYL*SGLGLP
Trigger: GGGCAAGCCCAACCCGGACCAGAGGTACTTCATGCT...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGCTATGGTTTTCCCATTaGCAAAGACCATGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRLWFSH*QRPCLR
Trigger: CCGGAGACATGGTCTTTGCCAATGGGAAAACCATAG...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATAACTGGCTCCCTGCATaGCTGAAGGCGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNNWLPA*LKAPEL
Trigger: CAGCTCGGGCGCCTTCAGCCATGCAGGGAGCCAGTT...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAATGGCTGATGCAGGCCTaGTCCGGAACCACGGACGAT +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEWLMQA*SGTTDD
Trigger: ATCGTCCGTGGTTCCGGACCAGGCCTGCATCAGCCA...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGCATGGAAACCAAGGCTaGGACTGTTCTTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWHGNQG*DCSWLC
Trigger: GCAAAGCCAAGAACAGTCCCAGCCTTGGTTTCCATG...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTGAATTCTCCAGCACCTaGATGGAGGTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIEFSST*MEVREG
Trigger: GCCCTCCCTGACCTCCATCCAGGTGCTGGAGAATTC...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGCCTGGAGCACAGTACTaGGAGGTGATGGACATCGAA +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKPGAQY*EVMDIE
Trigger: TTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGG...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGGCCCAAGAAGTCTCTaGCTCTCAGGTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWGPRSL*LSGSLC
Trigger: ACAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCTCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGTCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQSLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCTCTCTCCAAAAGGGTTaGCTCCAGTCTCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RICTGRPYVQLEARGRLASLQKG*LQSQKG
Trigger: CCCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGA...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCTTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFLEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCATTAGAAGTCCGAGTCTaGCGTAACAGGCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVALEVRV*RNRQTP
Trigger: TGGGGTTTGCCTGTTACGCCAGACTCGGACTTCTAA...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATAACCCAGGGTCTTGGTaGTTGGGAGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYNPGSW*LGVGWV
Trigger: CACCCATCCCACTCCCAACCACCAAGACCCTGGGTT...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTAACCCAGGGTCTTGGTaGTTGGGAGTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCINPGSW*LGVGWV
Trigger: CACCCATCCCACTCCCAACCACCAAGACCCTGGGTT...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCCCATTTCTGGACCCATaGCAGACATGGCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCPFLDP*QTWLNE
Trigger: TTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGG...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCAATTGGGGAGGGGGCTaGGAGCAAGCTATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVANWGGG*EQAIPA
Trigger: AGCAGGGATAGCTTGCTCCCAGCCCCCTCCCCAATT...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGGAACTGGGAGTTAACTaGGAAGTAGGGGGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: RHREDSPSGRENKVIIRKELGVN*EVGGAL
Trigger: TAGAGCGCCCCCTACTTCCCAGTTAACTCCCAGTTC...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCCTCAGAGTCAGAGTTaGCACATGACAAATACCAAG +
Preference number: 4 (lower is better)
Translates to: PESPLPSHPPGNSFKGESPQSQS*HMTNTK
Trigger: CTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGG...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CCA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTCCTCAGAGTCAGAGTTaGCACATGACAAATACCAAG +
Preference number: 4 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPPQSQS*HMTNTK
Trigger: CTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGG...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCATCCCAGGCTCCTGTTTaGTCATTCCATTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVASQAPV*SFHSAS
Trigger: AGATGCTGAATGGAATGATCAAACAGGAGCCTGGGA...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCTCCCAGGCTCCTGTTTaGTCATTCCATTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGSQAPV*SFHSAS
Trigger: AGATGCTGAATGGAATGATCAAACAGGAGCCTGGGA...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGTCCCAGGCTCCTGTTTaGTCATTCCATTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLASQAPV*SFHSAS
Trigger: AGATGCTGAATGGAATGATCAAACAGGAGCCTGGGA...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGCCCCTACGTTCTCCATaGAGATGCGCTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVPLRSP*RCAPCS
Trigger: TGAACAAGGAGCGCATCTTCATGGAGAACGTAGGGG...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCCGCAGTCCAAGAACATaGACCCCCATTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVARSPRT*TPIEEA
Trigger: GGCTTCCTCAATGGGGGTTCATGTTCTTGGACTGCG...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACCCTTTGACCTCAGGCTaGACAGCACCACAGACACGG +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNPLTSG*TAPQTR
Trigger: CCGTGTCTGTGGTGCTGTGCAGCCTGAGGTCAAAGG...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACCCAAGACCAGGCTGCTaGTTGAGGGATTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNPRPGC*LRDSCS
Trigger: GGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGG...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTAAAGCTATTTGCATCTaGCCACCAGCCAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLKAICI*PPAKTR
Trigger: CCTGGTCTTGGCTGGTGGGCAGATGCAAATAGCTTT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGACAGCAAAAGCTATTTaGATCTGCCCACCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLTAKAI*ICPPAK
Trigger: CTTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGT...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: SMHTQASKGARYGQEDLHPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGATGGGCAGGAGGATTTaGACTGGGAGGCCCTATGTA +
Preference number: 4 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWMGRRI*TGRPYV
Trigger: TACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCAT...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCACTGTCACCTGGAAGTaGTTCTTCTTCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFTVTWK*FFFWHT
Trigger: TGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGT...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAATGTACACTGTCACCTaGAAGTGGTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SHSKLRMSGGTGARPASQMYTVT*KWFFFW
Trigger: CCAGAAGAAGAACCACTTCCAGGTGACAGTGTACAT...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAACCTCTGAACTGCAGTTaGCCTGACCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASEPLNCS*PDPAVP
Trigger: TGGCACTGCTGGGTCAGGCCAACTGCAGTTCAGAGG...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCCCCTCCATTGACTCATaGGGGTCCACCCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAPSIDS*GSTQVS
Trigger: AGAGACTTGGGTGGACCCCCATGAGTCAATGGAGGG...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTGGCCCCTAGGGGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LQPPYLERGKLVLSWPLGGISSS*IFLVQG
Trigger: GCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCC...CCCTAGGGGCCAGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGSCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWSCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 4 (lower is better)
Translates to: REKKPPGPHLKLRSPSLASCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFSCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 4 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCCATTTCTGGACCCATaGCAGACATGGCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKPFLDP*QTWLNE
Trigger: TTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGG...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGTCCCTTTCCCATTTCTaGACCCATGGCAGACATGGC +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGSLSHF*THGRHG
Trigger: GCCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGA...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCGGCTCAGCCCCTGCATaGTTTGGGAATCGTAAAATT +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFGSAPA*FGNRKI
Trigger: AATTTTACGATTCCCAAACCATGCAGGGGCTGAGCC...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGSYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGTCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWSYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCTCCTATTACATGGAGTaGGGCTCGGCAGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: FTSEETNISGTGSKQARGSYYME*GSAVLR
Trigger: CCTTAAAACTGCCGAGCCCCACTCCATGTAATAGGA...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGAGGAATCCTATTACATaGAGTGGGGCTCGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQRNPIT*SGARQF
Trigger: AAACTGCCGAGCCCCACTCCATGTAATAGGATTCCT...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGAGGAATCCTATTACATaGAGTGGGGCTCGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLRNPIT*SGARQF
Trigger: AAACTGCCGAGCCCCACTCCATGTAATAGGATTCCT...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGAACTGGGAGTTAACTaGGAAGTAGGGGGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGELGVN*EVGGAL
Trigger: TAGAGCGCCCCCTACTTCCCAGTTAACTCCCAGTTC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR TCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATCGCCCACCGAAAAGTTaGAGCCCTTGTCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNRPPKS*SPCPHP
Trigger: TGGATGCGGACAAGGGCTTCAACTTTTCGGTGGGCG...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTATCTCCTTCACCTCCTaGGCGATGACACCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIISFTS*AMTPVS
Trigger: AGAGACAGGTGTCATCGCTCAGGAGGTGAAGGAGAT...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR TCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAACATGGTTCCTCCTTTaGCCTCAGGCTGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASETWFLL*PQAAQH
Trigger: GTGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGT...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTACAGCAACTCCAGTGTaGAGACTTCCAGTTTCACCA +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLTATPV*RLPVSP
Trigger: TGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTA +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVNMNPH*GSPGIL
Trigger: TAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTT...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGAACATGAACCCCCATTaGGGAAGCCCAGGAATCCTA +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGNMNPH*GSPGIL
Trigger: TAGGATTCCTGGGCTTCCTCAATGGGGGTTCATGTT...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR TCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTTTTCCAGTTAAGGACTaGGGGCCCGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIFPVKD*GPAVQE
Trigger: TTCTTGGACTGCGGGCCCTCAGTCCTTAACTGGAAA...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTGGGAGATTAGCCCAGTaGCTACAGGAACAAACGCCA +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIGRLAQ*LQEQTP
Trigger: TGGCGTTTGTTCCTGTAGTCACTGGGCTAATCTCCC...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGTGTACTCCTCCAGGATaGTGGTGTCTATGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVCTPPG*WCLCWR
Trigger: CCTCCAACATAGACACCAGCATCCTGGAGGAGTACA...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR GCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTAGTGCACCAGCCGCATaGGCGAGATCCTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCISAPAA*ARSSSI
Trigger: AATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACT...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR GCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGGATTCCTGCTCCTCTaGTCAGAGAGAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGGFLLL*SERMMW
Trigger: CCACATCATTCTCTCTGAGCAGAGGAGCAGGAATCC...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTATTCCATTCAGCATCTaGGCATTGAGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIIPFSI*ALRVLG
Trigger: CCCCAGCACCCTCAATGCCCAGATGCTGAATGGAAT...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATTCCCAAAGCTCTGGCTaGACCTGCCATCAGTGTCTA +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYSQSSG*TCHQCL
Trigger: TAGACACTGATGGCAGGTCCAGCCAGAGCTTTGGGA...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265460.9
CDS-3UTR CCA 90 bp TATTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGCATGGAAACCAAGGCTaGGACTGTTCTTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: YLLQKKRTFRGQEASRPGHGNQG*DCSWLC
Trigger: GCAAAGCCAAGAACAGTCCCAGCCTTGGTTTCCATG...CCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CCA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGTCCAACCACCATATCTaGAAAGAGGTAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLSNHHI*KEVNWS
Trigger: GGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGA...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPGISSS*IFLVQG
Trigger: GCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCC...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGGGAATTTCCTCTTCCTaGATATTCCTGGTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGGISSS*IFLVQG
Trigger: GCCTTGAACCAGGAATATCCAGGAAGAGGAAATTCC...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCACCATTTCTGGACCCATaGCAGACATGGCTAAATGAA +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPPFLDP*QTWLNE
Trigger: TTCATTTAGCCATGTCTGCCATGGGTCCAGAAATGG...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIHSTGR*WTSNSP
Trigger: TGGAGAATTCGATGTCCATCACCTCCCAGTACTGTG...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR TCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATAGGGAGAATGGGCTCTaGACAAATCAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNRENGL*TNQGHR
Trigger: CCTGTGGCCCTGATTTGTTCAGAGCCCATTCTCCCT...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATAACACATGTCCAAGGTaGGGACAGCAGAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNNTCPR*GQQNLG
Trigger: CCCCAGGTTCTGCTGTCCGCACCTTGGACATGTGTT...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGTATCCTGAGGACAAGTaGTTTGAGATCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRYPEDK*FEINGK
Trigger: TTTGCCATTGATCTCAAAGCACTTGTCCTCAGGATA...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGACTGTCACCTGGAAGTaGTTCTTCTTCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVTVTWK*FFFWHT
Trigger: TGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGT...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCAGGAAGTTCTCTATaGTTTTCCCATTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CFPKRWQHTTGQGQQFPFPGSSL*FSHWQR
Trigger: TCTTTGCCAATGGGAAAACCATAGAGAACTTCCTGG...GAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCCCAGGAAGTTCTCTATaGTTTTCCCATTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PLLRENDVVTDHCELQTLPGSSL*FSHWQR
Trigger: TCTTTGCCAATGGGAAAACCATAGAGAACTTCCTGG...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCACCAGGAAGTTCTCTATaGTTTTCCCATTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPPGSSL*FSHWQR
Trigger: TCTTTGCCAATGGGAAAACCATAGAGAACTTCCTGG...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVLPGYS*FKALGL
Trigger: AAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAG...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGGACCCATGGCAGACATaGCTAAATGAATACTACACT +
Preference number: 4 (lower is better)
Translates to: PAPLLRENDVVTDHCELQDPWQT*LNEYYT
Trigger: AGTGTAGTATTCATTTAGCCATGTCTGCCATGGGTC...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGAACTGGGAGTTAACTaGGAAGTAGGGGGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNELGVN*EVGGAL
Trigger: TAGAGCGCCCCCTACTTCCCAGTTAACTCCCAGTTC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR TCA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGGCTTCACCAGGCACTaGGTAGACTTAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SELAHDKYQAQGEELGVNGFTRH*VDLRHK
Trigger: TTTGTGCCTTAAGTCTACTCAGTGCCTGGTGAAGCC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR GCA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATTCAGAGCCCTGTCTTTaGAAGTGTCACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNSEPCL*KCHTPA
Trigger: AGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGA...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGTATCCTGAGGACAAGTaGTTTGAGATCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWYPEDK*FEINGK
Trigger: TTTGCCATTGATCTCAAAGCACTTGTCCTCAGGATA...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATCTATGGTTTTCCCATTaGCAAAGACCATGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYLWFSH*QRPCLR
Trigger: CCGGAGACATGGTCTTTGCCAATGGGAAAACCATAG...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCCTTCCTGGATATTCCTaGTTCAAGGCTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVALPGYS*FKALGL
Trigger: AAGCCCTAGAGCCTTGAACCAGGAATATCCAGGAAG...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTTCAGAGAGAATGATGTaGTCACTGATCACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLSERMM*SLITVS
Trigger: GCTCACAGTGATCAGTGACCACATCATTCTCTCTGA...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR GCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATCCTTCCATTCCTTCCTaGCCTGGTTTAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYPSIPS*PGLSAF
Trigger: AAATGCACTTAAACCAGGGCAGGAAGGAATGGAAGG...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAATGTACACTGTCACCTaGAAGTGGTTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIMYTVT*KWFFFW
Trigger: CCAGAAGAAGAACCACTTCCAGGTGACAGTGTACAT...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CCA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAAGCTGCAATACCATCTaGGGGCTCAAAGGGAATTTC +
Preference number: 4 (lower is better)
Translates to: TWLNEYYTPSMSLDVASESCNTI*GLKGNF
Trigger: GAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCT...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CCA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATCCTCAGAGTCAGAGTTaGCACATGACAAATACCAAG +
Preference number: 4 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYPQSQS*HMTNTK
Trigger: CTTGGTATTTGTCATGTGCCAACTCTGACTCTGAGG...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS GCA 90 bp AGCGCTGCAGCGCCTCCGTCTCGTCCACCACCTCCATGTCCCGCCTaGCCGGCGCACACTCCAGCCGCGGCCCCGCTACAGCCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: SAAAPPSRPPPPCPA*PAHTPAAAPLQPGP
Trigger: CGGGCCGGGCTGTAGCGGGGCCGCGGCTGGAGTGTGCGCCGGGCAGGCGGGACATGGAGGTGGTGGACGAGACGGAGGCGCTGCAGCGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000537766.1
CDS CCA 90 bp GCAGCTCGGGCCTGGCCGGCCCGCAGCTTCCCAGTCCCACCTACCTaGGTGTCCTGGTGGGTGTGGAGACTCTGTGGAAGGCTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: AARAWPARSFPVPPT*VSWWVWRLCGRLPS
Trigger: GGAGGGGAGCCTTCCACAGAGTCTCCACACCCACCAGGACACCCAGGTAGGTGGGACTGGGAAGCTGCGGGCCGGCCAGGCCCGAGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp CTGGGCTGGGTAGTGTCAGGGGTGCAGCAAGTACCTGACTGGCCCTaGGCCCAGGTGGGCTCAGCAGGGCCCACGCTGGACTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LGWVVSGVQQVPDWP*AQVGSAGPTLDWRA
Trigger: GGCCCTCCAGTCCAGCGTGGGCCCTGCTGAGCCCACCTGGGCCCAGGGCCAGTCAGGTACTTGCTGCACCCCTGACACTACCCAGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS GCA 90 bp GACCCATGCTCCCAGCCTCCCGCTGTGAGCATGTGCCCCGGGAGCTaGCCTGGAGTCTGGCTGGCCGGGTGGCTGCCTGGAACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: DPCSQPPAVSMCPGS*PGVWLAGWLPGTFG
Trigger: ACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCCCGGGGCACATGCTCACAGCGGGAGGCTGGGAGCATGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 90 bp CTCCATGAAGATGCGCTCCTGCCATGGGCCATGGGCCATGGGCCATaGGCCAACACAGAGGGCCCAGTCAGCCCCGGGAGCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LHEDALLPWAMGHGP*ANTEGPVSPGSPRL
Trigger: CAGCCTGGGGCTCCCGGGGCTGACTGGGCCCTCTGTGTTGGCCCATGGCCCATGGCCCATGGCCCATGGCAGGAGCGCATCTTCATGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS GCA 90 bp CCCACGCGGCCGTGGTGGAAGACGGTGTCGGGCACCTGTGCCCGCTaGCACAACACATCGCTGTCGCTCTCGAACTGGCCTGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: PTRPWWKTVSGTCAR*HNTSLSLSNWPGLE
Trigger: CTCCAACCCAGGCCAGTTCGAGAGCGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 90 bp AGCCGCATGCGCGAGATCCTCTTCAATTGCTCGGTGGTGTCCACCTaGGGGGAGCCAGGCCCGGGAATGAACCCCTCCTGCGGCCGTCCC +
Preference number: 5 (lower is better)
Translates to: SRMREILFNCSVVST*GEPGPGMNPSCGRP
Trigger: GGGACGGCCGCAGGAGGGGTTCATTCCCGGGCCTGGCTCCCCGCAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389602.4
CDS-3UTR CAA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGELPVD*RLSSRR
Trigger: GCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTC...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRELPVD*RLSSRR
Trigger: GCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 90 bp GTTGATGCCCACGCGGCCGTGGTGGAAGACGGTGTCGGGCACCTGTaGCCGCTGCCACAACACATCGCTGTCGCTCTCGAACTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VDAHAAVVEDGVGHL*PLPQHIAVALELAW
Trigger: CCAGGCCAGTTCGAGAGCGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGGCATCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 90 bp ATGCCAGGCCAGTGTCTAGCACCTCCCAGGTCACGGCCACAGCCCTaGTCCCTGCCTGCCCCTATGCCGCTGTATCCCCCTACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: MPGQCLAPPRSRPQP*SLPAPMPLYPPTPC
Trigger: GCAGGGAGTAGGGGGATACAGCGGCATAGGGGCAGGCAGGGAGCAGGGCTGTGGCCGTGACCTGGGAGGTGCTAGACACTGGCCTGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS GCA 90 bp GCATGTGCCCCGGGAGCTGCCCTGGAGTCTGGCTGGCCGGGTGGCTaGCTGGAACCTTTGGTCAAAGCCAGGCCTAAGGTTCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: ACAPGAALESGWPGG*LEPLVKARPKVQPW
Trigger: CCAGGGCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCCCGGGGCACATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS GCA 90 bp CCTCTTCTTGTGGGGGACGCTGCCCGCCCGACTGAACTGGCTCCCTaGATGGCTGCAGCAAGAGGGCCAGGATCAGGGGTGTCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PLLVGDAARPTELAP*MAAARGPGSGVSLG
Trigger: TCCCAGGGACACCCCTGATCCTGGCCCTCTTGCTGCAGCCATGCAGGGAGCCAGTTCAGTCGGGCGGGCAGCGTCCCCCACAAGAAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536352.5
CDS CCA 90 bp GTGCCCCGGGAGCTGCCCTGGAGTCTGGCTGGCCGGGTGGCTGCCTaGAACCTTTGGTCAAAGCCAGGCCTAAGGTTCAGCCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: VPRELPWSLAGRVAA*NLWSKPGLRFSPGS
Trigger: TGACCCAGGGCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCCCGGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 90 bp ATGCTCCCAGCCTCCCGCTGTGAGCATGTGCCCCGGGAGCTGCCCTaGAGTCTGGCTGGCCGGGTGGCTGCCTGGAACCTTTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: MLPASRCEHVPRELP*SLAGRVAAWNLWSK
Trigger: CTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCCCGGGGCACATGCTCACAGCGGGAGGCTGGGAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 90 bp ACGGCCCCTACGTTCTCCATGAAGATGCGCTCCTGCCATGGGCCATaGGCCATGGGCCATGGGCCAACACAGAGGGCCCAGTCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: TAPTFSMKMRSCHGP*AMGHGPTQRAQSAP
Trigger: CGGGGCTGACTGGGCCCTCTGTGTTGGCCCATGGCCCATGGCCCATGGCCCATGGCAGGAGCGCATCTTCATGGAGAACGTAGGGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS-3UTR CAA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGAGGCCCTCGGGCGTCTaGACGTACTTGGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWRPSGV*TYLGSP
Trigger: GGGCGAGCCCAAGTACGTCAAGACGCCCGAGGGCCT...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCTCCTGCACGTGTTCCTaGGCGCGCAGGTCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: HHCQPGSWQLPAGGPLTFSCTCS*ARRSEG
Trigger: CCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGGA...GAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 90 bp GCCAGGCATCGCAGGCTGCCCGTGGGAGTAGGAGGCCGAGCTGGCTaGAGCAGAGATGTCAGGGAAGCAGAGGTCGGAGGCATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: ARHRRLPVGVGGRAG*SRDVREAEVGGILL
Trigger: AAGGAGGATGCCTCCGACCTCTGCTTCCCTGACATCTCTGCTCCAGCCAGCTCGGCCTCCTACTCCCACGGGCAGCCTGCGATGCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS CCA 90 bp TGGAGCCAGGCATCGCAGGCTGCCCGTGGGAGTAGGAGGCCGAGCTaGCTGGAGCAGAGATGTCAGGGAAGCAGAGGTCGGAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: WSQASQAARGSRRPS*LEQRCQGSRGRRHP
Trigger: AGGATGCCTCCGACCTCTGCTTCCCTGACATCTCTGCTCCAGCCAGCTCGGCCTCCTACTCCCACGGGCAGCCTGCGATGCCTGGCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS CCA 90 bp TGGCCGGCCCGCAGCTTCCCAGTCCCACCTACCTGGGTGTCCTGGTaGGTGTGGAGACTCTGTGGAAGGCTCCCCTCCTCACATGGTTCC +
Preference number: 5 (lower is better)
Translates to: WPARSFPVPPTWVSW*VWRLCGRLPSSHGS
Trigger: GGAACCATGTGAGGAGGGGAGCCTTCCACAGAGTCTCCACACCCACCAGGACACCCAGGTAGGTGGGACTGGGAAGCTGCGGGCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp GAGCTGCCCTGGAGTCTGGCTGGCCGGGTGGCTGCCTGGAACCTTTaGTCAAAGCCAGGCCTAAGGTTCAGCCCTGGGTCAGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: ELPWSLAGRVAAWNL*SKPGLRFSPGSGPW
Trigger: CCAAGGGCCTGACCCAGGGCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS-3UTR CAA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGGGTTGAAGGGCCGCTaGCTCCGGTCTGACTGGGAC +
Preference number: 5 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQGLKGR*LRSDWD
Trigger: GTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCC...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGTCCGGCCGGTCTGTGTaGATGCCCACGCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKSGRSV*MPTRPW
Trigger: CCACGGCCGCGTGGGCATCAACACAGACCGGCCGGA...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS GCA 90 bp GGCTGTATGCCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGGCTGGACCATGGGCACAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GCMPGSPVVKGDCRS*VVPKLWLDHGHKAS
Trigger: TGAGGCCTTGTGCCCATGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000675319.1
ENST00000675345.1
CDS GCA 90 bp GTGTGTCTAGCTGGGCTCTCCCTCTGTCTTGGACCCTGTCTCTTCTaGAGGGCGACAGGGCTCGGGCCTCCCTCAGAAGCACCCCCACCT +
Preference number: 5 (lower is better)
Translates to: VCLAGLSLCLGPCLF*RATGLGPPSEAPPP
Trigger: AGGTGGGGGTGCTTCTGAGGGAGGCCCGAGCCCTGTCGCCCTGCAGAAGAGACAGGGTCCAAGACAGAGGGAGAGCCCAGCTAGACACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp GCAGGGGTGGCTGGAACACATGTCCAAGGTGCGGACAGCAGAACCTaGGGCCGAGCTGGTGAGGCTGGTGGTCACCAGCAGCAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: AGVAGTHVQGADSRT*GRAGEAGGHQQQRG
Trigger: CCCTCTTTGCTGCTGGTGACCACCAGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGCACCTTGGACATGTGTTCCAGCCACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS CCA 90 bp GTATGCCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGGACCATGGGCACAAGGCCTCACTCC +
Preference number: 5 (lower is better)
Translates to: VCLVAPWSRGTVGAA*SQSSGWTMGTRPHS
Trigger: GGAGTGAGGCCTTGTGCCCATGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000675319.1
ENST00000675345.1
CDS CCA 90 bp GGGCCAGCTCCTGTGGCCACAGTACACGTCAGCTGGATGCGTAAGTaGGTGGGCTTGGCGCGCGTGCACGGGTATGCAGGTGTTCCCATG +
Preference number: 5 (lower is better)
Translates to: GPAPVATVHVSWMRK*VGLARVHGYAGVPM
Trigger: CATGGGAACACCTGCATACCCGTGCACGCGCGCCAAGCCCACCCACTTACGCATCCAGCTGACGTGTACTGTGGCCACAGGAGCTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 90 bp CTCCTTCACGGCCCCTACGTTCTCCATGAAGATGCGCTCCTGCCATaGGCCATGGGCCATGGGCCATGGGCCAACACAGAGGGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: LLHGPYVLHEDALLP*AMGHGPWANTEGPV
Trigger: GACTGGGCCCTCTGTGTTGGCCCATGGCCCATGGCCCATGGCCCATGGCAGGAGCGCATCTTCATGGAGAACGTAGGGGCCGTGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS-3UTR CAA 90 bp ATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCCTCTGCAGGCCCTCGGGCGTCTaGACGTACTTGGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: ICPPAKTRLLLEGFLLLCRPSGV*TYLGSP
Trigger: GGGCGAGCCCAAGTACGTCAAGACGCCCGAGGGCCT...GCAGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGTCGAGCCGCCGCAGCTaGGCCAGCTTGTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQSSRRS*ASLWLQ
Trigger: CTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGA...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGACCCCCTCAAGCAGCTaGGATCCCCAGCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQTPSSS*DPQPVP
Trigger: GGGGACAGGCTGGGGATCCAAGCTGCTTGAGGGGGT...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS TCA 90 bp CCGATGATTACACCGCTACCAGCACGCTGCTCCTCGCAGCCTCCCTaGACAAACCGACTGCAGGCTGGCTGGCTGGGTAGGGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: PMITPLPARCSSQPP*TNRLQAGWLGRGGT
Trigger: AGTCCCACCCCTACCCAGCCAGCCAGCCTGCAGTCGGTTTGTTCAGGGAGGCTGCGAGGAGCAGCGTGCTGGTAGCGGTGTAATCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS TCA 90 bp GGCCGGGCGAGGGGGCCACTCACAGGTCGGAGGCATCCTCCTTGCTaGTGTACTCCTCCAGGATGCTGGTGTCTATGTTGGAGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GRARGPLTGRRHPPC*CTPPGCWCLCWRAP
Trigger: TGGAGCCCTCCAACATAGACACCAGCATCCTGGAGGAGTACATCAGCAAGGAGGATGCCTCCGACCTGTGAGTGGCCCCCTCGCCCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS GCA 90 bp ACCACGCTGAAGGCCATGACCACCACCAGGGCAATGATGGTTCCCTaGAGGAAGCGCTGGCTGATGCAGGCCTGGTCCGGAACCACGGAC +
Preference number: 5 (lower is better)
Translates to: TTLKAMTTTRAMMVP*RKRWLMQAWSGTTD
Trigger: GTCCGTGGTTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGGAACCATCATTGCCCTGGTGGTGGTCATGGCCTTCAGCGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
ENST00000675345.1
CDS GCA 90 bp GGCTGTATGCCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGGCTGGACCTGCCATCAGTGTCTACC +
Preference number: 5 (lower is better)
Translates to: GCMPGSPVVKGDCRS*VVPKLWLDLPSVST
Trigger: GGTAGACACTGATGGCAGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000546247.1
CDS GCA 90 bp CGCTGGCGGCGAACTCGGGCTTGTATCTGTAGTGCACCAGCCGCATaGGCGAGATCCTCTTCAATTGCTCGGTGGTGTCCACCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: RWRRTRACICSAPAA*ARSSSIARWCPPAG
Trigger: CCCCGCAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACTACAGATACAAGCCCGAGTTCGCCGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389602.4
CDS GCA 90 bp TATAACTCCCAGCTTCTGCTCCTTGCCCATTTTGGGGCCCAGTTGTaGCAGGAGAGAAGCAGCTCGGGCCTGGCCGGCCCGCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: YNSQLLLLAHFGAQL*QERSSSGLAGPQLP
Trigger: GGGAAGCTGCGGGCCGGCCAGGCCCGAGCTGCTTCTCTCCTGGCACAACTGGGCCCCAAAATGGGCAAGGAGCAGAAGCTGGGAGTTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp TGGTGGTCACCAGCAGCAAAGAGGGCTGTATGCCTGGTAGCCCCGTaGTCAAGGGGGACTGTCGGAGCTGCGTGGTCCCAAAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: WWSPAAKRAVCLVAP*SRGTVGAAWSQSSG
Trigger: GCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATACAGCCCTCTTTGCTGCTGGTGACCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS CCA 90 bp CATCTGAGCCATGGGCCAGCTCCTGTGGCCACAGTACACGTCAGCTaGATGCGTAAGTGGGTGGGCTTGGCGCGCGTGCACGGGTATGCA +
Preference number: 5 (lower is better)
Translates to: HLSHGPAPVATVHVS*MRKWVGLARVHGYA
Trigger: TGCATACCCGTGCACGCGCGCCAAGCCCACCCACTTACGCATCCAGCTGACGTGTACTGTGGCCACAGGAGCTGGCCCATGGCTCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS-3UTR CAA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCAAGCAGTCGAGGGGCTaGAGGCCCTCGGGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPKQSRG*RPSGVL
Trigger: CAAGACGCCCGAGGGCCTCAAGCCCCTCGACTGCTT...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGAAGACACTCACACCATaGCCAGCCGGGCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWKTLTP*PAGQLA
Trigger: TGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTT...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS GCA 90 bp GTGTCCACCTCCTGCACGTGTTCCTTGGCGCGCAGGTCGGAGGGGTaGATAAGCGAGCCCATGACCTTGACATTCCCGTGCACAACCAGC +
Preference number: 5 (lower is better)
Translates to: VSTSCTCSLARRSEG*ISEPMTLTFPCTTS
Trigger: GCTGGTTGTGCACGGGAATGTCAAGGTCATGGGCTCGCTTATGCACCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGGAGGTGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 90 bp GCCATGACCACCACCAGGGCAATGATGGTTCCCTGCAGGAAGCGCTaGCTGATGCAGGCCTGGTCCGGAACCACGGACGATGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: AMTTTRAMMVPCRKR*LMQAWSGTTDDDLL
Trigger: CAGCAAGTCATCGTCCGTGGTTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGGAACCATCATTGCCCTGGTGGTGGTCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
ENST00000675345.1
CDS CCA 90 bp GTATGCCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGGACCTGCCATCAGTGTCTACCAGGT +
Preference number: 5 (lower is better)
Translates to: VCLVAPWSRGTVGAA*SQSSGWTCHQCLPG
Trigger: ACCTGGTAGACACTGATGGCAGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000546247.1
CDS CCA 90 bp GCTCCTCGCAGCCTCCCTGAACAAACCGACTGCAGGCTGGCTGGCTaGGTAGGGGTGGGACTGAAGTGTGACAAGTCAGATGGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: APRSLPEQTDCRLAG*VGVGLKCDKSDGGD
Trigger: GTCTCCCCCATCTGACTTGTCACACTTCAGTCCCACCCCTACCCAGCCAGCCAGCCTGCAGTCGGTTTGTTCAGGGAGGCTGCGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp CCGCCCCCTCCCTGCAGGGAACTATGGAGATTTCGGAGGAGTCAGTaGCTGGGAAGGGACGAGGAGCAGCTTTCAGAGGTGGGACCACAG +
Preference number: 5 (lower is better)
Translates to: PPPPCRELWRFRRSQ*LGRDEEQLSEVGPQ
Trigger: CTGTGGTCCCACCTCTGAAAGCTGCTCCTCGTCCCTTCCCAGCCACTGACTCCTCCGAAATCTCCATAGTTCCCTGCAGGGAGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 90 bp GTATGCCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGGACCCATCAGTGTCTACCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: VCLVAPWSRGTVGAA*SQSSGWTHQCLPGP
Trigger: AGGACCTGGTAGACACTGATGGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS-3UTR CAA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGTACCTCTGGTCCGGGTaGGGCTTGCCCTTCTTACGC +
Preference number: 5 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQYLWSG*GLPFLR
Trigger: GCGTAAGAAGGGCAAGCCCAACCCGGACCAGAGGTA...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGTCCGGCCGGTCTGTGTaGATGCCCACGCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRSGRSV*MPTRPW
Trigger: CCACGGCCGCGTGGGCATCAACACAGACCGGCCGGA...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTGGATGCGCGTCTCCAGGTaGTCTGTCAGCTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: AKTLTPLPAGQLAASSRWMRVSR*SVSLHS
Trigger: GCTGTGCAAGCTGACAGACAACCTGGAGACGCGCAT...CCACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGATGCGCGTCTCCAGGTaGTCTGTCAGCTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQMRVSR*SVSLHS
Trigger: GCTGTGCAAGCTGACAGACAACCTGGAGACGCGCAT...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CCGGCTGTCCTCAGACTCGGCTGTTCTGAGGCTCTGCGGGAGATTCTCCCTGGCGGACCAGTGGTAGGGTaGGTAGTGGGTGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: PAVLRLGCSEALREILPGGPVVG*VVGEEQ
Trigger: CTGTTCCTCACCCACTACCAACCCTACCACTGGTCC...GCCAGGGAGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTGAGGACAGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675345.1
CDS-3UTR CAA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQRTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCACCCCCTCAAGCAGCTaGGATCCCCAGCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTTPSSS*DPQPVP
Trigger: GGGGACAGGCTGGGGATCCAAGCTGCTTGAGGGGGT...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGGCTCCAGGGCACCGTaGATGTCGTGGCCTTCGAAG +
Preference number: 5 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISGSRAP*MSWPSK
Trigger: CTTCGAAGGCCACGACATCAACGGTGCCCTGGAGCC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278836.10
CDS TCA 90 bp GGGCAGATTGACCGTGACCGGGTTGAAGGGCCGCTTGCTCCGGTCTaGCTGGGACTGCTCGATGTTAATGGACTGGTTCAGGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GQIDRDRVEGPLAPV*LGLLDVNGLVQGLQ
Trigger: CTGGAGGCCCTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCCGGTCACGGTCAATCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS TCA 90 bp AGGAAATACCAGAGACTCTCCGGCTGTCCTCAGACTCGGCTGTTCTaGGGCTCTGCGGGAGATTCTCCCTGGCTCCCCTCCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RKYQRLSGCPQTRLF*GSAGDSPWLPSCLP
Trigger: TGGGAGGCAGGAGGGGAGCCAGGGAGAATCTCCCGCAGAGCCTCAGAACAGCCGAGTCTGAGGACAGCCGGAGAGTCTCTGGTATTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS TCA 90 bp ACAGGGTGGCATGCAGCCTGGCTGCAGGCAGCTTGCCCATCTACCTaGGGCTTTGGCTGTGCGTCTGTGATGTGGTTTCAGGCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: TGWHAAWLQAACPST*GFGCASVMWFQARA
Trigger: TGCTCGGGCCTGAAACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGCAGCCAGGCTGCATGCCACCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 90 bp ACCGTGACCGGGTTGAAGGGCCGCTTGCTCCGGTCTGACTGGGACTaGTCGATGTTAATGGACTGGTTCAGGGCCTCCAGCTTCACTCCG +
Preference number: 5 (lower is better)
Translates to: TVTGLKGRLLRSDWD*SMLMDWFRASSFTP
Trigger: CGGAGTGAAGCTGGAGGCCCTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCCGGTCACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 90 bp GGCTTGCCCTTCTTACGCATGTTGTTAGCGGTGGTCTCGCTGAAGTaGAGCCGCCCCACAGTCACCTTCGTGACCTGCTCAGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GLPFLRMLLAVVSLK*SRPTVTFVTCSGGR
Trigger: TCTGCCCCCTGAGCAGGTCACGAAGGTGACTGTGGGGCGGCTGCACTTCAGCGAGACCACCGCTAACAACATGCGTAAGAAGGGCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 90 bp CGCTGGCGGCGAACTCGGGCTTGTATCTGTAGTGCACCAGCCGCATaGGCGAGATCCTCTTCAATTGCTCGGTGGTGTCCACCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RWRRTRACICSAPAA*ARSSSIARWCPPPA
Trigger: TGCAGGAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACTACAGATACAAGCCCGAGTTCGCCGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGGGGGTGGCAGGCAGGAAGGCCCAAGAAGTCTCTGGCTCTCAGGTTCCCTCTGTCGGAGGCATCCTCCTaGCTGATGTACTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RGWQAGRPKKSLALRFPLSEASS*LMYSSR
Trigger: CCTGGAGGAGTACATCAGCAAGGAGGATGCCTCCGA...CAGAGGGAACCTGAGAGCCAGAGACTTCTTGGGCCTTCCTGCCTGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCGCCCATGCCGTTGTaGTTGTTGCAGTTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: KSLALRFPLCREGRPAGTAPMPL*LLQFSG
Trigger: CCCGCTGAACTGCAACAACAACAACGGCATGGGCGC...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp GAAGACTTCCAGTTTCACCAGTCTCGGGTAGGGCCAGTGAACAGCAGAGCTGGCAAGCAGTCGAGGGGCTaGAGGCCCTCGGGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: EDFQFHQSRVGPVNSRAGKQSRG*RPSGVL
Trigger: CAAGACGCCCGAGGGCCTCAAGCCCCTCGACTGCTT...GCCAGCTCTGCTGTTCACTGGCCCTACCCGAGACTGGTGAAACTGGAAGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTGGGTTGAAGGGCCGCTaGCTCCGGTCTGACTGGGAC +
Preference number: 5 (lower is better)
Translates to: ACFPKRWQHTTGQGQQFPGLKGR*LRSDWD
Trigger: GTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCC...AGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGGGGCAAGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGTACCTCTGGTCCGGGTaGGGCTTGCCCTTCTTACGC +
Preference number: 5 (lower is better)
Translates to: RGKACFPKRWQHTTGQGQYLWSG*GLPFLR
Trigger: GCGTAAGAAGGGCAAGCCCAACCCGGACCAGAGGTA...CTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCTTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGTCCTGCACGTGTTCCTaGGCGCGCAGGTCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKSCTCS*ARRSEG
Trigger: CCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGGA...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHELPVD*RLSSRR
Trigger: GCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTC...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGGGACCAGTGGTAGGGTaGGTAGTGGGTGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQGPVVG*VVGEEQ
Trigger: CTGTTCCTCACCCACTACCAACCCTACCACTGGTCC...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGAGTGGCCAATGCCATaGACTGAAAGACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GGALCTRRLLRVHGMGRREWPMP*TERPQD
Trigger: GTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACTC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQRTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SRGRSMHTQASKGARYGQVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...CTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACAGCAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: SLWLSGSLCAVRGDQLEQQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...CTGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS TCA 90 bp CCAGGGAAGGGGACTGCAGGGCTGGCCAGAGGCTCCAGACTCTTGTaGTGCTTGGAGTGGCCAATGCCATTGACTGAAAGACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PGKGTAGLARGSRLL*CLEWPMPLTERPQD
Trigger: GTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCCTCTGGCCAGCCCTGCAGTCCCCTTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS TCA 90 bp AGTTCCCAGGCCTGCAGGCATCCCCTGGAGCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCAGCACCTGGATGGAGGTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: SSQACRHPLEHSTGR*WTSNSPAPGWRSGR
Trigger: CCTCCCTGACCTCCATCCAGGTGCTGGAGAATTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGGCCTGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000539361.1
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS GCA 90 bp AGCCTGGCTGCAGGCAGCTTGCCCATCTACCTGAGGCTTTGGCTGTaGGTCTGTGATGTGGTTTCAGGCCCGAGCACCATGTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLAAGSLPIYLRLWL*VCDVVSGPSTMSAV
Trigger: CACAGCAGACATGGTGCTCGGGCCTGAAACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGCAGCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp CACGGGGGAGGAGGAGTTCATCTGCAGAGTCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGGGATGTGGTAGGTGAAGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HGGGGVHLQSQAEVQ*GATTDRDVVGEVPR
Trigger: CCTGGGAACTTCACCTACCACATCCCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGATGAACTCCTCCTCCCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000675319.1
ENST00000675792.1
CDS CCA 90 bp GCATGCAGCCTGGCTGCAGGCAGCTTGCCCATCTACCTGAGGCTTTaGCTGTGCGTCTGTGATGTGGTTTCAGGCCCGAGCACCATGTCT +
Preference number: 5 (lower is better)
Translates to: ACSLAAGSLPIYLRL*LCVCDVVSGPSTMS
Trigger: AGACATGGTGCTCGGGCCTGAAACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGCAGCCAGGCTGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS-3UTR CAA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGCGCCCATGCCGTTGTaGTTGTTGCAGTTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRAPMPL*LLQFSG
Trigger: CCCGCTGAACTGCAACAACAACAACGGCATGGGCGC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp AGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTAGCCAGGCCCTCGGGCGTCTaGACGTACTTGGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: RICTGRPYVQLEARGRLARPSGV*TYLGSP
Trigger: GGGCGAGCCCAAGTACGTCAAGACGCCCGAGGGCCT...GGCTAATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGTGGTCCGGGTTGGGCTaGCCCTTCTTACGCATGTTG +
Preference number: 5 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKWSGLG*PFLRML
Trigger: CAACATGCGTAAGAAGGGCAAGCCCAACCCGGACCA...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTACCTCTGGTCCGGGTaGGGCTTGCCCTTCTTACGC +
Preference number: 5 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLYLWSG*GLPFLR
Trigger: GCGTAAGAAGGGCAAGCCCAACCCGGACCAGAGGTA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCAGACATGGTCGAGCCGCCGCAGCTaGGCCAGCTTGTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TGQGQQFPFPFLDPWQTWSSRRS*ASLWLQ
Trigger: CTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGA...CCATGTCTGCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATCGAGCCGCCGCAGCTaGGCCAGCTTGTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPSSRRS*ASLWLQ
Trigger: CTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGA...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: SMHTQASKGARYGQEDLHAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAACCCCCTCAAGCAGCTaGGATCCCCAGCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SHSKLRMSGGTGARPASQTPSSS*DPQPVP
Trigger: GGGGACAGGCTGGGGATCCAAGCTGCTTGAGGGGGT...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS CCA 90 bp AGATTGACCGTGACCGGGTTGAAGGGCCGCTTGCTCCGGTCTGACTaGGACTGCTCGATGTTAATGGACTGGTTCAGGGCCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RLTVTGLKGRLLRSD*DCSMLMDWFRASSF
Trigger: GAAGCTGGAGGCCCTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCCGGTCACGGTCAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 90 bp CCACACCGGCACTCACTTCATCTGCAGAGTCAGGCTGAGGTGCAGTaGGGTGCCACTACTGACAGGGATGTGGTAGGTGAAGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PHRHSLHLQSQAEVQ*GATTDRDVVGEVPR
Trigger: CCTGGGAACTTCACCTACCACATCCCTGTCAGTAGTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGATGAAGTGAGTGCCGGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539361.1
ENST00000675345.1
CDS-3UTR CAA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGATGCTGGTGTCTATGTaGGAGGGCTCCAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLMLVSM*EGSRAP
Trigger: CGGTGCCCTGGAGCCCTCCAACATAGACACCAGCAT...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGGTCCCAGGCTCCTGTTaGATCATTCCATTCAGCATC +
Preference number: 5 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRVPGSC*IIPFSI
Trigger: GATGCTGAATGGAATGATCAAACAGGAGCCTGGGAC...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AACTGGGAAGTAGGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTTCGCCCACCGAAAAGTaGAAGCCCTTGTCCGCATCC +
Preference number: 5 (lower is better)
Translates to: NWEVGGALCTRRLLRVHGSPTEK*KPLSAS
Trigger: GGATGCGGACAAGGGCTTCAACTTTTCGGTGGGCGA...ACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCCTACTTCCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGTGCTCAGGGGGCAGATaGACCGTGACCGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLCSGGR*TVTGLK
Trigger: CTTCAACCCGGTCACGGTCAATCTGCCCCCTGAGCA...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AAGTCTCTGGCTCTCAGGTTCCCTCTGTGCCGTGAGGGGCGACCAGCTGGAACACCCTTCTTACGCATGTaGTTAGCGGTGGTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KSLALRFPLCREGRPAGTPFLRM*LAVVSL
Trigger: CAGCGAGACCACCGCTAACAACATGCGTAAGAAGGG...TGTTCCAGCTGGTCGCCCCTCACGGCACAGAGGGAACCTGAGAGCCAGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp ACAGAGCCAGCTGCTAACGGTTTTGGGGCTGTGCTGTGTCCAGATGGGCTCCATTCGAACTGGCCTGGGTaGGAGGCCCGCACAATGATG +
Preference number: 5 (lower is better)
Translates to: TEPAANGFGAVLCPDGLHSNWPG*EARTMM
Trigger: CATCATTGTGCGGGCCTCCAACCCAGGCCAGTTCGA...ATGGAGCCCATCTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTTCCTGCACGTGTTCCTaGGCGCGCAGGTCGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPSCTCS*ARRSEG
Trigger: CCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGGA...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CAGGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGATGAAGATGCGCTCCTaGTTCACCACCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QGQDTHTIASRAAGSFQQMKMRS*FTTRKF
Trigger: GAACTTCCTGGTGGTGAACAAGGAGCGCATCTTCAT...CTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGGAGGGATCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGGACTTGGCTCTGATGTaGGTGACTGGCAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRDQSQSPVFASVTPLLWDLALM*VTGRRA
Trigger: GGCCCTTCTGCCAGTCACCAACATCAGAGCCAAGTC...CCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGATCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCACACATGGTTCCTCCTTaGACCTCAGGCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISHMVPP*TSGCTA
Trigger: TGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGTG...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGCACATGGTTCCTCCTTaGACCTCAGGCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKHMVPP*TSGCTA
Trigger: TGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGTG...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGAAGACACTCACACCATaGCCAGCCGGGCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLKTLTP*PAGQLA
Trigger: TGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTT...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCAAGACACTCACACCATaGCCAGCCGGGCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSKTLTP*PAGQLA
Trigger: TGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTATGGGCAGGAGGATTaGCACTGGGAGGCCCTATGT +
Preference number: 5 (lower is better)
Translates to: SHPPGNSFKGESRLPSIDYGQED*HWEALC
Trigger: ACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATA...GTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS TCA 90 bp TGCAGGCAGCTTGCCCATCTACCTGAGGCTTTGGCTGTGCGTCTGTaGTGTGGTTTCAGGCCCGAGCACCATGTCTGCTGTGTGTCTAGC +
Preference number: 5 (lower is better)
Translates to: CRQLAHLPEALAVRL*CGFRPEHHVCCVSS
Trigger: GCTAGACACACAGCAGACATGGTGCTCGGGCCTGAAACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp TTGACGTACTTGGGCTCGCCCAGCATGCCGATGTACACTGTCACCTaGAAGTGGTTCTTCTTCTGGCACACAAAGGCGTCGTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: LTYLGSPSMPMYTVT*KWFFFWHTKASSPT
Trigger: GGTGGGCGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGTGTACATCGGCATGCTGGGCGAGCCCAAGTACGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 90 bp GAAATAGTAGGGGAGACCCAGTATAGCACCCTCCTGGTGCTGGCATaGCGAAGGAGGAGCCAGGCTCGGGATCAAATACAAGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: EIVGETQYSTLLVLA*RRRSQARDQIQALP
Trigger: AGGCAGGGCTTGTATTTGATCCCGAGCCTGGCTCCTCCTTCGCCATGCCAGCACCAGGAGGGTGCTATACTGGGTCTCCCCTACTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537318.5
ENST00000539361.1
CDS-3UTR CAA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCGCAGCGCCCATGCCGTaGTTGTTGTTGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSAAPMP*LLLQFS
Trigger: GCTGAACTGCAACAACAACAACGGCATGGGCGCTGC...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGCAGCGCCCATGCCGTaGTTGTTGTTGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQAAPMP*LLLQFS
Trigger: GCTGAACTGCAACAACAACAACGGCATGGGCGCTGC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTTCGCCCACCGAAAAGTaGAAGCCCTTGTCCGCATCC +
Preference number: 5 (lower is better)
Translates to: SESEPCLCKCHTPALAHSSPTEK*KPLSAS
Trigger: GGATGCGGACAAGGGCTTCAACTTTTCGGTGGGCGA...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAACCCTTCTTACGCATGTaGTTAGCGGTGGTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQPFLRM*LAVVSL
Trigger: CAGCGAGACCACCGCTAACAACATGCGTAAGAAGGG...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGGTCCGGGTTGGGCTaGCCCTTCTTACGCATGTTG +
Preference number: 5 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGWSGLG*PFLRML
Trigger: CAACATGCGTAAGAAGGGCAAGCCCAACCCGGACCA...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGTCGAACTGGCCTGGGTaGGAGGCCCGCACAATGATG +
Preference number: 5 (lower is better)
Translates to: GKPQKVHYQAIPQGTALRSNWPG*EARTMM
Trigger: CATCATTGTGCGGGCCTCCAACCCAGGCCAGTTCGA...CCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GGGCCAAGACACTCACACCATTGCCAGCCGGGCAGCTGGCAGCTTCCAGCAGGTTCTATGGTTTTCCCATaGGCAAAGACCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: GPRHSHHCQPGSWQLPAGSMVFP*AKTMSP
Trigger: CGGAGACATGGTCTTTGCCAATGGGAAAACCATAGA...ACCTGCTGGAAGCTGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CCAGAAAGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCAGGTTGTCTGTCAGCTaGCACAGCTCCTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: PESPLPSHPPGNSFKGESRLSVS*HSSFTA
Trigger: GGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCT...GCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACTTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGACTTGGCTCTGATGTaGGTGACTGGCAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQDLALM*VTGRRA
Trigger: GGCCCTTCTGCCAGTCACCAACATCAGAGCCAAGTC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp CCTCCATTGACTCATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: PPLTHGGPPKSLRAGSEPLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...GGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCATGAGTCAATGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGCATAGGGAGGATTCCCCCAGTGGGAGGGAGAACAAAGTCATCATAAGGAAGGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: RHREDSPSGRENKVIIRKAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...CTTCCTTATGATGACTTTGTTCTCCCTCCCACTGGGGGAATCCTCCCTATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTGCCGTCTGCCCTCCATaGACTCATGGGGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLAVCPP*THGGPP
Trigger: GGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGC...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSRPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALRPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGCCTGCTTCCCAAAGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: RPASQRGGSIPQGKDSNSVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...GGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCTTTGGGAAGCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GGGGGCGCTCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGCAGCCCCTGCATGGTTaGGGAATCGTAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: GGALCTRRLLRVHGMGRRQPLHG*GIVKFL
Trigger: TAGGAATTTTACGATTCCCAAACCATGCAGGGGCTG...CCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGAGCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGGCAGCTTCCAGCAGGTGGCCCACTTACCTTCCCTGAAGCCCTTTTACCACAGCAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: WQLPAGGPLTFPEALLPQQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...CTGTGGTAAAAGGGCTTCAGGGAAGGTAAGTGGGCCACCTGCTGGAAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCTGCAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RLKAQSQFLQPRQGWPRLQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...CAGCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTACCCCCTCAAGCAGCTaGGATCCCCAGCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLTPSSS*DPQPVP
Trigger: GGGGACAGGCTGGGGATCCAAGCTGCTTGAGGGGGT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp CAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAATATGGGCAGGAGGATTaGCACTGGGAGGCCCTATGT +
Preference number: 5 (lower is better)
Translates to: QTLPGTQAVKLQYHLGAQYGQED*HWEALC
Trigger: ACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATA...TTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS CCA 90 bp TACTTGGGCTCGCCCAGCATGCCGATGTACACTGTCACCTGGAAGTaGTTCTTCTTCTGGCACACAAAGGCGTCGTCGCCCACCGAAAAG +
Preference number: 5 (lower is better)
Translates to: YLGSPSMPMYTVTWK*FFFWHTKASSPTEK
Trigger: CTTTTCGGTGGGCGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGTGTACATCGGCATGCTGGGCGAGCCCAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 90 bp TACCTGGCCAGGGAGGAGCTCACCATCCAGTTCTCCCAGAAGAGGTaGCCAAACATGGAACCTGAGGGGCCCTCTGATGCTGTACATCTA +
Preference number: 5 (lower is better)
Translates to: YLAREELTIQFSQKR*PNMEPEGPSDAVHL
Trigger: TAGATGTACAGCATCAGAGGGCCCCTCAGGTTCCATGTTTGGCCACCTCTTCTGGGAGAACTGGATGGTGAGCTCCTCCCTGGCCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS-3UTR CAA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGATGCTGGTGTCTATGTaGGAGGGCTCCAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAMLVSM*EGSRAP
Trigger: CGGTGCCCTGGAGCCCTCCAACATAGACACCAGCAT...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp ATGGGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAGTCCCAGGCTCCTGTTaGATCATTCCATTCAGCATC +
Preference number: 5 (lower is better)
Translates to: MGVHPSLLGLDPSPLLISVPGSC*IIPFSI
Trigger: GATGCTGAATGGAATGATCAAACAGGAGCCTGGGAC...TGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTCGCCCACCGAAAAGTaGAAGCCCTTGTCCGCATCC +
Preference number: 5 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDSPTEK*KPLSAS
Trigger: GGATGCGGACAAGGGCTTCAACTTTTCGGTGGGCGA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCATGCTCAGGGGGCAGATaGACCGTGACCGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVACSGGR*TVTGLK
Trigger: CTTCAACCCGGTCACGGTCAATCTGCCCCCTGAGCA...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCTGGTCCGGGTTGGGCTaGCCCTTCTTACGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAWSGLG*PFLRML
Trigger: CAACATGCGTAAGAAGGGCAAGCCCAACCCGGACCA...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGTCGAACTGGCCTGGGTaGGAGGCCCGCACAATGATG +
Preference number: 5 (lower is better)
Translates to: PAPLLRENDVVTDHCELQSNWPG*EARTMM
Trigger: CATCATTGTGCGGGCCTCCAACCCAGGCCAGTTCGA...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GTAGACTTAAGGCACAAAGTCAGTTTCTCCAACCCAGGCAGGGCTGGCCTCGGCCGAGATCCTCTTCAATaGCTCGGTGGTGTCCACCTC +
Preference number: 5 (lower is better)
Translates to: VDLRHKVSFSNPGRAGLGRDPLQ*LGGVHL
Trigger: GAGGTGGACACCACCGAGCAATTGAAGAGGATCTCG...GCCGAGGCCAGCCCTGCCTGGGTTGGAGAAACTGACTTTGTGCCTTAAGTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TCTATGCACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACGGACCAGTGGTAGGGTaGGTAGTGGGTGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: SMHTQASKGARYGQEDLHGPVVG*VVGEEQ
Trigger: CTGTTCCTCACCCACTACCAACCCTACCACTGGTCC...GTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGTGCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp ACACGCAGGCTTCTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGGAAAGACCCCAGGACTaGGCTCTGATGTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: TRRLLRVHGMGRRICTGRERPQD*ALMLVT
Trigger: AGTCACCAACATCAGAGCCAAGTCCTGGGGTCTTTC...CCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAGAAGCCTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp CTAAGGGTGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGGAGTGGCCAATGCCATaGACTGAAAGACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LRVHGMGRRICTGRPYVQEWPMP*TERPQD
Trigger: GTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACTC...CTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCACCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTCACATGGTTCCTCCTTaGACCTCAGGCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SESEPCLCKCHTPALAHSHMVPP*TSGCTA
Trigger: TGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGTG...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GGTGAATTCACGGAAGGACAGGATGGTTATTGGCCACCGGTGAGAGGTGCCCTGCACATGGTTCCTCCTTaGACCTCAGGCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: GEFTEGQDGYWPPVRGALHMVPP*TSGCTA
Trigger: TGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGTG...CAGGGCACCTCTCACCGGTGGCCAATAACCATCCTGTCCTTCCGTGAATTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDRTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCAAGACACTCACACCATaGCCAGCCGGGCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISKTLTP*PAGQLA
Trigger: TGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTT...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGTATGGGCAGGAGGATTaGCACTGGGAGGCCCTATGT +
Preference number: 5 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLYGQED*HWEALC
Trigger: ACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATA...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS TCA 90 bp GGCACTGGCTCTGCAAGGAGAGAGGCTGTTGGGGCAGGAGTAAGGTaGCAAGGCAGGACACAAATGAGAAGCTGGCAAGTCTTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: GTGSARREAVGAGVR*QGRTQMRSWQVFPC
Trigger: GCAAGGAAAGACTTGCCAGCTTCTCATTTGTGTCCTGCCTTGTCACCTTACTCCTGCCCCAACAGCCTCTCTCCTTGCAGAGCCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 90 bp TCCTCAGCAGCCCTAGGACTACCCAGTTCCCATGAGCCTGACGTCTaGCTCCTCAAAAGAACTGGAACACCCAGAAGTAGGGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: SSAALGLPSSHEPDV*LLKRTGTPRSRDGS
Trigger: AGACCCATCCCTACTTCTGGGTGTTCCAGTTCTTTTGAGGAGGCAGACGTCAGGCTCATGGGAACTGGGTAGTCCTAGGGCTGCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 90 bp TGCCTGTTTCCATCATTGCACTCATCCACATTAGCACCTGTGATCTaGTGTCTTCCCCACGTCTCCAGCACGGCAGGGCTGGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: CLFPSLHSSTLAPVI*CLPHVSSTAGLGDA
Trigger: AGCATCTCCCAGCCCTGCCGTGCTGGAGACGTGGGGAAGACAGCAGATCACAGGTGCTAATGTGGATGAGTGCAATGATGGAAACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp CCCAGCATGCCGATGTACACTGTCACCTGGAAGTGGTTCTTCTTCTaGCACACAAAGGCGTCGTCGCCCACCGAAAAGTTGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PSMPMYTVTWKWFFF*HTKASSPTEKLKPL
Trigger: CAAGGGCTTCAACTTTTCGGTGGGCGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGTGTACATCGGCATGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 90 bp GTCCTGAGCGTCTTCTCCCATGGCCTCTTAGGCTCAAGAAGAAACTaGGGGTCCATCAGCCCCAGGGACAGTCATAACTTCCGGTTACCT +
Preference number: 5 (lower is better)
Translates to: VLSVFSHGLLGSRRN*GSISPRDSHNFRLP
Trigger: AGGTAACCGGAAGTTATGACTGTCCCTGGGGCTGATGGACCCCCAGTTTCTTCTTGAGCCTAAGAGGCCATGGGAGAAGACGCTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp CCTCGGATGACTGGTGTCTCAGATGTCAGCACTTCACTATTCAGCTaGGGTGGAGACCTATTACATGCCTCCTTGGCGCCCAGACTCAGG +
Preference number: 5 (lower is better)
Translates to: PRMTGVSDVSTSLFS*GGDLLHASLAPRLR
Trigger: CCTGAGTCTGGGCGCCAAGGAGGCATGTAATAGGTCTCCACCCCAGCTGAATAGTGAAGTGCTGACATCTGAGACACCAGTCATCCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS-3UTR CAA 90 bp AGGAACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCGGAGGCATCCTCCTaGCTGATGTACTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RNAGSEAAIPSGGSKGISSEASS*LMYSSR
Trigger: CCTGGAGGAGTACATCAGCAAGGAGGATGCCTCCGA...GGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp AGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGGCCCCATGCCGTTGTTGTaGTTGCAGTTCAGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: SIPQGKDSNSLSHFWTHGPMPLL*LQFSGV
Trigger: CACCCCGCTGAACTGCAACAACAACAACGGCATGGG...GCCATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTAAGCAGTCGAGGGGCTaGAGGCCCTCGGGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIKQSRG*RPSGVL
Trigger: CAAGACGCCCGAGGGCCTCAAGCCCCTCGACTGCTT...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CTGAGCTTTCTAGCTCCATCCTTCCATTCCTTCCTGCCCTGGTTTAAGTGCATTGGGTTGAAGGGCCGCTaGCTCCGGTCTGACTGGGAC +
Preference number: 5 (lower is better)
Translates to: LSFLAPSFHSFLPWFKCIGLKGR*LRSDWD
Trigger: GTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCC...AATGCACTTAAACCAGGGCAGGAAGGAATGGAAGGATGGAGCTAGAAAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGATCCCCAGCCCCCTTCTTACGCATGTaGTTAGCGGTGGTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LRQLWSKVDPLKQLGSPAPFLRM*LAVVSL
Trigger: CAGCGAGACCACCGCTAACAACATGCGTAAGAAGGG...GGCTGGGGATCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TCAGCCCCTGCATGGTTTGGGAATCGTAAAATTCCTATGTCAACGGAACCAAATTCCGGCCGGTCTGTGTaGATGCCCACGCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: SAPAWFGNRKIPMSTEPNSGRSV*MPTRPW
Trigger: CCACGGCCGCGTGGGCATCAACACAGACCGGCCGGA...ATTTGGTTCCGTTGACATAGGAATTTTACGATTCCCAAACCATGCAGGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCAAGGTTGTCTGTCAGCTaGCACAGCTCCTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPRLSVS*HSSFTA
Trigger: GGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCT...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCATGCGCGTCTCCAGGTaGTCTGTCAGCTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: PLLRENDVVTDHCELQTLMRVSR*SVSLHS
Trigger: GCTGTGCAAGCTGACAGACAACCTGGAGACGCGCAT...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGGACTTGGCTCTGATGTaGGTGACTGGCAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWDLALM*VTGRRA
Trigger: GGCCCTTCTGCCAGTCACCAACATCAGAGCCAAGTC...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp ATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCTCGAAAGACCCCAGGACTaGGCTCTGATGTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: ICICPPAKTRLLLEGFLLERPQD*ALMLVT
Trigger: AGTCACCAACATCAGAGCCAAGTCCTGGGGTCTTTC...GAGCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWRPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGAGTCAGAGCCCTGTCTTaGCAAGTGTCACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGVRALS*QVSHPC
Trigger: GCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGAC...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGCAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TCCGAGTCTGGCGTAACAGGCAAACCCCAGAAAGTCCACTACCAAGCCATCCCCAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SESGVTGKPQKVHYQAIPNFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...GGGGATGGCTTGGTAGTGGACTTTCTGGGGTTTGCCTGTTACGCCAGACTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATTATGGGCAGGAGGATTaGCACTGGGAGGCCCTATGT +
Preference number: 5 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDYGQED*HWEALC
Trigger: ACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATA...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS GCA 90 bp CGGGCCTCCCTCAGAAGCACCCCCACCTCTGTTGCAGGTGCTTTCTaGACGTCTTTTCTCCCTCACTATAGAGTACGTTCTTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: RASLRSTPTSVAGAF*TSFLPHYRVRSWKS
Trigger: TGACTTCCAAGAACGTACTCTATAGTGAGGGAGAAAAGACGTGCAGAAAGCACCTGCAACAGAGGTGGGGGTGCTTCTGAGGGAGGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 90 bp GCACTTCACTATTCAGCTGGGGTGGAGACCTATTACATGCCTCCTTaGCGCCCAGACTCAGGACAGGTAAGTGACAAACGTCGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: ALHYSAGVETYYMPP*RPDSGQVSDKRRPH
Trigger: GTGAGGACGACGTTTGTCACTTACCTGTCCTGAGTCTGGGCGCCAAGGAGGCATGTAATAGGTCTCCACCCCAGCTGAATAGTGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS CCA 90 bp GATGACTGGTGTCTCAGATGTCAGCACTTCACTATTCAGCTGGGGTaGAGACCTATTACATGCCTCCTTGGCGCCCAGACTCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: DDWCLRCQHFTIQLG*RPITCLLGAQTQDR
Trigger: CCTGTCCTGAGTCTGGGCGCCAAGGAGGCATGTAATAGGTCTCCACCCCAGCTGAATAGTGAAGTGCTGACATCTGAGACACCAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS-3UTR CAA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTCCCATGCCGTTGTTGTaGTTGCAGTTCAGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPPMPLL*LQFSGV
Trigger: CACCCCGCTGAACTGCAACAACAACAACGGCATGGG...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp CTATTTGCATCTGCCCACCAGCCAAGACCAGGCTGCTGCTTGAGGGATTCCTGCGTCCCAGGCTCCTGTTaGATCATTCCATTCAGCATC +
Preference number: 5 (lower is better)
Translates to: LFASAHQPRPGCCLRDSCVPGSC*IIPFSI
Trigger: GATGCTGAATGGAATGATCAAACAGGAGCCTGGGAC...GCAGGAATCCCTCAAGCAGCAGCCTGGTCTTGGCTGGTGGGCAGATGCAAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCACGAGATCCTCTTCAATaGCTCGGTGGTGTCCACCTC +
Preference number: 5 (lower is better)
Translates to: WQHTTGQGQQFPFPFLDPRDPLQ*LGGVHL
Trigger: GAGGTGGACACCACCGAGCAATTGAAGAGGATCTCG...TGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp CCTGCTCCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGCGAGATCCTCTTCAATaGCTCGGTGGTGTCCACCTC +
Preference number: 5 (lower is better)
Translates to: PAPLLRENDVVTDHCELQRDPLQ*LGGVHL
Trigger: GAGGTGGACACCACCGAGCAATTGAAGAGGATCTCG...CTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGGAGCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp AGTCCACTACCAAGCCATCCCCCAGGGAACAGCTTTAAGGGGGAGAGCCGTCTGTCTATGGTTTTCCCATaGGCAAAGACCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: SPLPSHPPGNSFKGESRLSMVFP*AKTMSP
Trigger: CGGAGACATGGTCTTTGCCAATGGGAAAACCATAGA...CAGACGGCTCTCCCCCTTAAAGCTGTTCCCTGGGGGATGGCTTGGTAGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TCAGAGTCAGAGCCCTGTCTTTGCAAGTGTCACACCCCTGCTCTGGCCCACTCTATGAAGATGCGCTCCTaGTTCACCACCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SESEPCLCKCHTPALAHSMKMRS*FTTRKF
Trigger: GAACTTCCTGGTGGTGAACAAGGAGCGCATCTTCAT...AGAGTGGGCCAGAGCAGGGGTGTGACACTTGCAAAGACAGGGCTCTGACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATGAAAGACCCCAGGACTaGGCTCTGATGTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDERPQD*ALMLVT
Trigger: AGTCACCAACATCAGAGCCAAGTCCTGGGGTCTTTC...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp CCTCTGCTCAGAGAGAATGATGTGGTCACTGATCACTGTGAGCTCCAGACGCTCGAGTGGCCAATGCCATaGACTGAAAGACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PLLRENDVVTDHCELQTLEWPMP*TERPQD
Trigger: GTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACTC...GAGCGTCTGGAGCTCACAGTGATCAGTGACCACATCATTCTCTCTGAGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGGAGTGGCCAATGCCATaGACTGAAAGACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: REKKPPGPHLKLRSPSLAEWPMP*TERPQD
Trigger: GTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACTC...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGACACATGGTTCCTCCTTaGACCTCAGGCTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGHMVPP*TSGCTA
Trigger: TGCTGTGCAGCCTGAGGTCAAAGGAGGAACCATGTG...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp CTGAACCAGCCCTCCAACCACCATATCTGGAAAGAGGTAAACTGGTCCTGTCCTAGACCAGGCTGCTGCTaGAGGGATTCCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LNQPSNHHIWKEVNWSCPRPGCC*RDSCSS
Trigger: AGAGGAGCAGGAATCCCTCAAGCAGCAGCCTGGTCT...AGGACAGGACCAGTTTACCTCTTTCCAGATATGGTGGTTGGAGGGCTGGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AACAGCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: NSFKGESRLPSIDSWGSTNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...GGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TTTACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTAAGACACTCACACCATaGCCAGCCGGGCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FTTGLRQLWSKVDPLKQLKTLTP*PAGQLA
Trigger: TGCCAGCTGCCCGGCTGGCAATGGTGTGAGTGTCTT...AAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS TCA 90 bp AGGCTCCAGACTCTTGTGATGCTTGGAGTGGCCAATGCCATTGACTaGAAGACCCCAGGACTTGGCTCTGATGTTGGTGACTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RLQTLVMLGVANAID*KTPGLGSDVGDWQK
Trigger: CTTCTGCCAGTCACCAACATCAGAGCCAAGTCCTGGGGTCTTTCAGTCAATGGCATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS GCA 90 bp GAGTGTCCCTTGTGGAGAAGGCTTTACTCTATAACTCCCAGCTTCTaGTCCTTGCCCATTTTGGGGCCCAGTTGTGCCAGGAGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: ECPLWRRLYSITPSF*SLPILGPSCARREA
Trigger: TGCTTCTCTCCTGGCACAACTGGGCCCCAAAATGGGCAAGGAGCAGAAGCTGGGAGTTATAGAGTAAAGCCTTCTCCACAAGGGACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS-3UTR CAA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGTCTATGGTTTTCCCATaGGCAAAGACCATGTCTCCG +
Preference number: 5 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLSMVFP*AKTMSP
Trigger: CGGAGACATGGTCTTTGCCAATGGGAAAACCATAGA...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATATGAAGATGCGCTCCTaGTTCACCACCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDMKMRS*FTTRKF
Trigger: GAACTTCCTGGTGGTGAACAAGGAGCGCATCTTCAT...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGAGGTTGTCTGTCAGCTaGCACAGCTCCTTCACGGCC +
Preference number: 5 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVRLSVS*HSSFTA
Trigger: GGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCT...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGGGACCAGTGGTAGGGTaGGTAGTGGGTGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWGPVVG*VVGEEQ
Trigger: CTGTTCCTCACCCACTACCAACCCTACCACTGGTCC...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp GCTTTAAGGGGGAGAGCCGTCTGCCCTCCATTGACTCATGGGGGTCCACCCAAGGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 5 (lower is better)
Translates to: ALRGRAVCPPLTHGGPPKAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...CTTGGGTGGACCCCCATGAGTCAATGGAGGGCAGACGGCTCTCCCCCTTAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GGGGTCCACCCAAGTCTCTTAGGGCTGGATCCGAGCCCCCTGCTGATCTCAAAGGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 5 (lower is better)
Translates to: GVHPSLLGLDPSPLLISKAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...CTTTGAGATCAGCAGGGGGCTCGGATCCAGCCCTAAGAGACTTGGGTGGACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATAGTCAACGGAACCAAATaGGGGAGGGGGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIVNGTK*GRGLGA
Trigger: TGCTCCCAGCCCCCTCCCCAATTTGGTTCCGTTGAC...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGTGAGCTCCAGACGCTCCCAGGAACGCAGGCAGTGAAGCTGCAATACCATCTGCAGCCCCTGCATGGTTaGGGAATCGTAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: CELQTLPGTQAVKLQYHLQPLHG*GIVKFL
Trigger: TAGGAATTTTACGATTCCCAAACCATGCAGGGGCTG...CAGATGGTATTGCAGCTTCACTGCCTGCGTTCCTGGGAGCGTCTGGAGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGGCGAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: REKKPPGPHLKLRSPSLANFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...CGCCAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp CCTGGATGTAGCCTCGGAATGCACCAGGCACCACTAAGAAACTTGAAGGTGGCAAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PGCSLGMHQAPLRNLKVANFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...TGCCACCTTCAAGTTTCTTAGTGGTGCCTGGTGCATTCCGAGGCTACATCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp ACCACAGGCTTAAGGCAACTTTGGTCCAAGGTTGACCCCCTCAAGCAGCTTGGAAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TTGLRQLWSKVDPLKQLGNFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...TCCAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTTGCCTTAAGCCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGGCAGACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCATGCCGTTGTTGTTGTaGCAGTTCAGCGGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: WQTWLNEYYTPSMSLDVAMPLLL*QFSGVP
Trigger: CGGCACCCCGCTGAACTGCAACAACAACAACGGCAT...GGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS-3UTR CAA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACTGCTCAGGGGGCAGATaGACCGTGACCGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SELAHDKYQAQGEELGVNCSGGR*TVTGLK
Trigger: CTTCAACCCGGTCACGGTCAATCTGCCCCCTGAGCA...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp GTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATATAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: VKLQYHLGAQREFPLPGYRTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...ATATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TCCCATTCAAAGCTGAGAATGAGTGGTGGGACAGGGGCAAGGCCTGCTTCCCAAAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: SHSKLRMSGGTGARPASQNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...TTGGGAAGCAGGCCTTGCCCCTGTCCCACCACTCATTCTCAGCTTTGAATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGCACGGTATGGGCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: CTVWAGGFALGGPMYSLKNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...CTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGCCCATACCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GCAGGAGGATTTGCACTGGGAGGCCCTATGTACAGCTTGAAGCTAGGGGGAGATCAGCCCCTGCATGGTTaGGGAATCGTAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: AGGFALGGPMYSLKLGGDQPLHG*GIVKFL
Trigger: TAGGAATTTTACGATTCCCAAACCATGCAGGGGCTG...ATCTCCCCCTAGCTTCAAGCTGTACATAGGGCCTCCCAGTGCAAATCCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTCCTGGATACAGCTGCTAACGGTTTaGGGGCTGTGCTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: SEAAIPSGGSKGISSSWIQLLTV*GLCCVQ
Trigger: CTGGACACAGCACAGCCCCAAAACCGTTAGCAGCTG...TATCCAGGAAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp ACGCAGGCAGTGAAGCTGCAATACCATCTGGGGGCTCAAAGGGAATTTCCTCTTAACTTTGGTCCAAGGTaGACCCCCTCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TQAVKLQYHLGAQREFPLNFGPR*TPSSSL
Trigger: CAAGCTGCTTGAGGGGGTCAACCTTGGACCAAAGTT...AAGAGGAAATTCCCTTTGAGCCCCCAGATGGTATTGCAGCTTCACTGCCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGCAGCGCCCATGCCGTaGTTGTTGTTGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SELAHDKYQAQGEELGVNAAPMP*LLLQFS
Trigger: GCTGAACTGCAACAACAACAACGGCATGGGCGCTGC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS-3UTR CAA 90 bp ACATGGCTAAATGAATACTACACTCCTTCCATGAGCCTGGATGTAGCCTCGGAAAGGACAGGATGGTTATaGGCCACCGGTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: TWLNEYYTPSMSLDVASERTGWL*ATGERC
Trigger: GCACCTCTCACCGGTGGCCAATAACCATCCTGTCCT...TTCCGAGGCTACATCCAGGCTCATGGAAGGAGTGTAGTATTCATTTAGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TGGCACTTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGCTCTCTCCAAAAGGGTaGGCTCCAGTCTCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: WHLRYNFFPNPGSWWLGVLSPKG*APVSKG
Trigger: CCCTTTTGAGACTGGAGCCAACCCTTTTGGAGAGAG...CACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp AGAGGTGGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGAACAGCAAAAGCTATTaGCATCTGCCCACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: RGGSIPQGKDSNSLSHFWNSKSY*HLPTSQ
Trigger: TTGGCTGGTGGGCAGATGCAAATAGCTTTTGCTGTT...CCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp CCCAGGGAGAAGAAACCTCCTGGGCCACACTTAAAGCTTAGAAGTCCGAGTCTGCAGCCCCTGCATGGTTaGGGAATCGTAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: PREKKPPGPHLKLRSPSLQPLHG*GIVKFL
Trigger: TAGGAATTTTACGATTCCCAAACCATGCAGGGGCTG...CAGACTCGGACTTCTAAGCTTTAAGTGTGGCCCAGGAGGTTTCTTCTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS GCA 90 bp GTGGGACTGAAGTGTGACAAGTCAGATGGGGGAGACAGGACTTCTTaGTCATCTAGTTCACATACAGTCTTGCTGCTGCCTGACTATCCA +
Preference number: 5 (lower is better)
Translates to: VGLKCDKSDGGDRTS*SSSSHTVLLLPDYP
Trigger: TGGATAGTCAGGCAGCAGCAAGACTGTATGTGAACTAGATGAGCAAGAAGTCCTGTCTCCCCCATCTGACTTGTCACACTTCAGTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS-3UTR CAA 90 bp TCAGAGTTGGCACATGACAAATACCAAGCTCAGGGAGAAGAACTGGGAGTTAACGAAAGACCCCAGGACTaGGCTCTGATGTTGGTGACT +
Preference number: 5 (lower is better)
Translates to: SELAHDKYQAQGEELGVNERPQD*ALMLVT
Trigger: AGTCACCAACATCAGAGCCAAGTCCTGGGGTCTTTC...GTTAACTCCCAGTTCTTCTCCCTGAGCTTGGTATTTGTCATGTGCCAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
CDS-3UTR CAA 90 bp TTTACTTCAGAAGAAACGAACATTTCGGGGACAGGAAGCAAGCAGGCCCGGGGCGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 5 (lower is better)
Translates to: FTSEETNISGTGSKQARGAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...GCCCCGGGCCTGCTTGCTTCCTGTCCCCGAAATGTTCGTTTCTTCTGAAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675345.1
CDS-3UTR CAA 90 bp ACCAGCTGGAACAGCAACTCCAGTGTGAAGACTTCCAGTTTCACCAGTCTCGGGGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 5 (lower is better)
Translates to: TSWNSNSSVKTSSFTSLGAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...CCCGAGACTGGTGAAACTGGAAGTCTTCACACTGGAGTTGCTGTTCCAGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp GGCAGCATACCACAGGGCAAGGACAGCAATTCCCTTTCCCATTTCTGGACCCATGCACCACTAAGAAACTaGAAGGTGGCACTTAAGATA +
Preference number: 5 (lower is better)
Translates to: GSIPQGKDSNSLSHFWTHAPLRN*KVALKI
Trigger: TATCTTAAGTGCCACCTTCAAGTTTCTTAGTGGTGC...ATGGGTCCAGAAATGGGAAAGGGAATTGCTGTCCTTGCCCTGTGGTATGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS-3UTR CAA 90 bp TTAAGATACAACTTCTTCCCTAACCCAGGGTCTTGGTGGTTGGGAGTGGGATGGCAGCCCCTGCATGGTTaGGGAATCGTAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: LRYNFFPNPGSWWLGVGWQPLHG*GIVKFL
Trigger: TAGGAATTTTACGATTCCCAAACCATGCAGGGGCTG...CCATCCCACTCCCAACCACCAAGACCCTGGGTTAGGGAAGAAGTTGTATCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS CCA 90 bp TATCAGATACAGACGAGATGGAAGGTGCCCTTCCCACATCCCTTCTaGGCAAATTCCAAAGGTCCTTTAAAGAGTCAGCTCAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: YQIQTRWKVPFPHPF*ANSKGPLKSQLKCH
Trigger: GTGACATTTGAGCTGACTCTTTAAAGGACCTTTGGAATTTGCCCAGAAGGGATGTGGGAAGGGCACCTTCCATCTCGTCTGTATCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp GCGCCTCCGTCTCGTCCACCACCTCCATGTCCCGCCTaGCCGGCGCACACTCCAGCCGCGGCCCCGCTACAG +
Preference number: 6 (lower is better)
Translates to: APPSRPPPPCPA*PAHTPAAAPLQ
Trigger: CTGTAGCGGGGCCGCGGCTGGAGTGTGCGCCGGGCAGGCGGGACATGGAGGTGGTGGACGAGACGGAGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000537766.1
CDS CCA 72 bp TGGGCCCAGGTGGGCTCAGCAGGGCCCACGCTGGACTaGAGGGCCCCTCGGCGGGCCCGGCCATGGAAACCA +
Preference number: 6 (lower is better)
Translates to: WAQVGSAGPTLD*RAPRRARPWKP
Trigger: TGGTTTCCATGGCCGGGCCCGCCGAGGGGCCCTCCAGTCCAGCGTGGGCCCTGCTGAGCCCACCTGGGCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS GCA 72 bp GCAGACCCATGCTCCCAGCCTCCCGCTGTGAGCATGTaGCCCGGGAGCTGCCCTGGAGTCTGGCTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: ADPCSQPPAVSM*PGSCPGVWLAG
Trigger: CCCGGCCAGCCAGACTCCAGGGCAGCTCCCGGGGCACATGCTCACAGCGGGAGGCTGGGAGCATGGGTCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 90 bp CCCAGGCTGCCAGACATCAGGGGGCAGGAGGGGCGGCCACTGTCCTaGGCCACTGGGAGGCCCTCAAAGTCTCCCTACCTGGGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: PRLPDIRGQEGRPLS*ATGRPSKSPYLGGP
Trigger: GGGCCCGCCCAGGTAGGGAGACTTTGAGGGCCTCCCAGTGGCCAAGGACAGTGGCCGCCCCTCCTGCCCCCTGATGTCTGGCAGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS CAA 90 bp CCCACCCCGCACCCCTACCTGAAGGCGCCCGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGCAGCTTGGCCAGCTTGTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PTPHPYLKAPELPVD*RLSSRRSLASLWLQ
Trigger: CTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTCGGGCGCCTTCAGGTAGGGGTGCGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536352.5
CDS CCA 72 bp GCCTCCCGCTGTGAGCATGTGCCCCGGGAGCTGCCCTaGAGTCTGGCTGGCCGGGTGGCTGCCTGGAACCTT +
Preference number: 6 (lower is better)
Translates to: ASRCEHVPRELP*SLAGRVAAWNL
Trigger: AAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCCCGGGGCACATGCTCACAGCGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 90 bp GCGCCCGAGCTGCCGGTGGACTTGAGGCTGTCGAGCCGCCGCAGCTaGGCCAGCTTGTGGCTCCAGCGCTCCAGCTCATCAATGCGCGTC +
Preference number: 6 (lower is better)
Translates to: APELPVDLRLSSRRS*ASLWLQRSSSSMRV
Trigger: GACGCGCATTGATGAGCTGGAGCGCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTCGGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS GCA 72 bp GTGGGGGACGCTGCCCGCCCGACTGAACTGGCTCCCTaGATGGCTGCAGCAAGAGGGCCAGGATCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: VGDAARPTELAP*MAAARGPGSGV
Trigger: CACCCCTGATCCTGGCCCTCTTGCTGCAGCCATGCAGGGAGCCAGTTCAGTCGGGCGGGCAGCGTCCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536352.5
CDS CCA 72 bp GGGGGCGGATGCTCCAGGCGGGAGGGCACTCCCACGTaGCACAGTGTCTCAGGGGTTATCGTGCGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GGGCSRREGTPT*HSVSGVIVRRR
Trigger: CCTCCTGCGCACGATAACCCCTGAGACACTGTGCCACGTGGGAGTGCCCTCCCGCCTGGAGCATCCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000278836.10
CDS CCA 72 bp GGGGAGGGGGCACCTGGCGGGTGCCAAGGCGGTGTCTaGACACGGGCAATGCTGAGAGGCAAGGAACCAGGG +
Preference number: 6 (lower is better)
Translates to: GEGAPGGCQGGV*TRAMLRGKEPG
Trigger: CCCTGGTTCCTTGCCTCTCAGCATTGCCCGTGTCCAGACACCGCCTTGGCACCCGCCAGGTGCCCCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp TCATCCGGCCGGTCTGTGTTGATGCCCACGCGGCCGTaGTGGAAGACGGTGTCGGGCACCTGTGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSGRSVLMPTRP*WKTVSGTCARC
Trigger: GCAGCGGGCACAGGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGGCATCAACACAGACCGGCCGGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp CTCTTCTTGTGGGGGACGCTGCCCGCCCGACTGAACTaGCTCCCTGCATGGCTGAAGGCGCCCGAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LFLWGTLPARLN*LPAWLKAPELP
Trigger: CGGCAGCTCGGGCGCCTTCAGCCATGCAGGGAGCCAGTTCAGTCGGGCGGGCAGCGTCCCCCACAAGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000675319.1
CDS CCA 72 bp GGTCCGGAACCACGGACGATGACTTGCTGGCCACCTTaGGGGGCCTCTTCTTGTGGGGGACGCTGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: GPEPRTMTCWPP*GASSCGGRCPP
Trigger: GGGCGGGCAGCGTCCCCCACAAGAAGAGGCCCCCCAAGGTGGCCAGCAAGTCATCGTCCGTGGTTCCGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 72 bp CCTGCATGGCTGAAGGCGCCCGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGCAGCTTGGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PAWLKAPELPVD*RLSSRRSLASL
Trigger: CAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTCGGGCGCCTTCAGCCATGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000675319.1
CDS CAA 72 bp CACCCCTACCTGAAGGCGCCCGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGCAGCTTGGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: HPYLKAPELPVD*RLSSRRSLASL
Trigger: CAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTCGGGCGCCTTCAGGTAGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536352.5
CDS CAA 90 bp AACTGGCTCCCTGCATGGCTGAAGGCGCCCGAGCTGCCGGTGGACTaGAGGCTGTCGAGCCGCCGCAGCTTGGCCAGCTTGTGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: NWLPAWLKAPELPVD*RLSSRRSLASLWLQ
Trigger: CTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAGCTCGGGCGCCTTCAGCCATGCAGGGAGCCAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000675319.1
CDS TCA 72 bp CGTGCACAACCAGCGCCTCATCCGGCCGGTCTGTGTTaGTGCCCACGCGGCCGTGGTGGAAGACGGTGTCGG +
Preference number: 6 (lower is better)
Translates to: RAQPAPHPAGLC*CPRGRGGRRCR
Trigger: CCGACACCGTCTTCCACCACGGCCGCGTGGGCATCAACACAGACCGGCCGGATGAGGCGCTGGTTGTGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp ACGCTGGACTGGAGGGCCCCTCGGCGGGCCCGGCCATaGAAACCAAGGCTGGGACTGTTCTTGGCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: TLDWRAPRRARP*KPRLGLFLALP
Trigger: GGGCAAAGCCAAGAACAGTCCCAGCCTTGGTTTCCATGGCCGGGCCCGCCGAGGGGCCCTCCAGTCCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS CAA 72 bp CCGTGCACAACCAGCGCCTCATCCGGCCGGTCTGTGTaGATGCCCACGCGGCCGTGGTGGAAGACGGTGTCG +
Preference number: 6 (lower is better)
Translates to: PCTTSASSGRSV*MPTRPWWKTVS
Trigger: CGACACCGTCTTCCACCACGGCCGCGTGGGCATCAACACAGACCGGCCGGATGAGGCGCTGGTTGTGCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp CACGCGGCCGTGGTGGAAGACGGTGTCGGGCACCTGTaGCCGCTGCCACAACACATCGCTGTCGCTCTCGAA +
Preference number: 6 (lower is better)
Translates to: HAAVVEDGVGHL*PLPQHIAVALE
Trigger: TTCGAGAGCGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACCGTCTTCCACCACGGCCGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp CCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGGCTGGACCATGGGCAC +
Preference number: 6 (lower is better)
Translates to: PGSPVVKGDCRS*VVPKLWLDHGH
Trigger: GTGCCCATGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000675319.1
ENST00000675345.1
CDS CCA 72 bp CACCTGTCTCTGGCGCGGTGGCCTCGATGCCCGCGCTaGCGGCGAACTCGGGCTTGTATCTGTAGTGCACCA +
Preference number: 6 (lower is better)
Translates to: HLSLARWPRCPR*RRTRACICSAP
Trigger: TGGTGCACTACAGATACAAGCCCGAGTTCGCCGCCAGCGCGGGCATCGAGGCCACCGCGCCAGAGACAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000675319.1
CDS CAA 72 bp CTGCCGGTGGACTTGAGGCTGTCGAGCCGCCGCAGCTaGGCCAGCTTGTGGCTCCAGCGCTCCAGCTCATCA +
Preference number: 6 (lower is better)
Translates to: LPVDLRLSSRRS*ASLWLQRSSSS
Trigger: TGATGAGCTGGAGCGCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 90 bp CTGCCGGTGGACTTGAGGCTGTCGAGCCGCCGCAGCTTGGCCAGCTaGTGGCTCCAGCGCTCCAGCTCATCAATGCGCGTCTCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: LPVDLRLSSRRSLAS*WLQRSSSSMRVSRL
Trigger: CAACCTGGAGACGCGCATTGATGAGCTGGAGCGCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTCCACCGGCAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 90 bp GGAGCTGCCCTGGAGTCTGGCTGGCCGGGTGGCTGCCTGGAACCTTaGGTCAAAGCCAGGCCTAAGGTTCAGCCCTGGGTCAGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: GAALESGWPGGCLEP*VKARPKVQPWVRPL
Trigger: CAAGGGCCTGACCCAGGGCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS GCA 72 bp CCGTGGTGGAAGACGGTGTCGGGCACCTGTGCCCGCTaGCACAACACATCGCTGTCGCTCTCGAACTGGCCT +
Preference number: 6 (lower is better)
Translates to: PWWKTVSGTCAR*HNTSLSLSNWP
Trigger: AGGCCAGTTCGAGAGCGACAGCGATGTGTTGTGGCAGCGGGCACAGGTGCCCGACACCGTCTTCCACCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp CCTGGTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTaGGTGGTCCCAAAGCTCTGGCTGGACCTGCCATCA +
Preference number: 6 (lower is better)
Translates to: PGSPVVKGDCRS*VVPKLWLDLPS
Trigger: TGATGGCAGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000546247.1
CDS GCA 72 bp CGCGAGATCCTCTTCAATTGCTCGGTGGTGTCCACCTaGGGGGAGCCAGGCCCGGGAATGAACCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: REILFNCSVVST*GEPGPGMNPSC
Trigger: GCAGGAGGGGTTCATTCCCGGGCCTGGCTCCCCGCAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389602.4
CDS GCA 72 bp GCTGGGCTCTCCCTCTGTCTTGGACCCTGTCTCTTCTaGAGGGCGACAGGGCTCGGGCCTCCCTCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: AGLSLCLGPCLF*RATGLGPPSEA
Trigger: TGCTTCTGAGGGAGGCCCGAGCCCTGTCGCCCTGCAGAAGAGACAGGGTCCAAGACAGAGGGAGAGCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp CCGGGAGCTGCCCTGGAGTCTGGCTGGCCGGGTGGCTaGCTGGAACCTTTGGTCAAAGCCAGGCCTAAGGTT +
Preference number: 6 (lower is better)
Translates to: PGAALESGWPGG*LEPLVKARPKV
Trigger: AACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp GTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGGACCATGGGCACAAGG +
Preference number: 6 (lower is better)
Translates to: VAPWSRGTVGAA*SQSSGWTMGTR
Trigger: CCTTGTGCCCATGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000675319.1
ENST00000675345.1
CDS CCA 72 bp CTCTTCTTGTGGGGGACGCTGCCCGCCCGACTGAACTaGCTCCCTGCATGGCTGCAGCAAGAGGGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LFLWGTLPARLN*LPAWLQQEGQD
Trigger: ATCCTGGCCCTCTTGCTGCAGCCATGCAGGGAGCCAGTTCAGTCGGGCGGGCAGCGTCCCCCACAAGAAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536352.5
CDS CAA 72 bp GACTTGAGGCTGTCGAGCCGCCGCAGCTTGGCCAGCTaGTGGCTCCAGCGCTCCAGCTCATCAATGCGCGTC +
Preference number: 6 (lower is better)
Translates to: DLRLSSRRSLAS*WLQRSSSSMRV
Trigger: GACGCGCATTGATGAGCTGGAGCGCTGGAGCCACAAGCTGGCCAAGCTGCGGCGGCTCGACAGCCTCAAGTC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 72 bp GTAGTGCACCAGCCGCATGCGCGAGATCCTCTTCAATaGCTCGGTGGTGTCCACCTGCGGGGAGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: VVHQPHARDPLQ*LGGVHLRGARP
Trigger: GGGCCTGGCTCCCCGCAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389602.4
CDS CAA 90 bp TTGACATTCCCGTGCACAACCAGCGCCTCATCCGGCCGGTCTGTGTaGATGCCCACGCGGCCGTGGTGGAAGACGGTGTCGGGCACCTGT +
Preference number: 6 (lower is better)
Translates to: LTFPCTTSASSGRSV*MPTRPWWKTVSGTC
Trigger: ACAGGTGCCCGACACCGTCTTCCACCACGGCCGCGTGGGCATCAACACAGACCGGCCGGATGAGGCGCTGGTTGTGCACGGGAATGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CAA 90 bp TCCTTGGCGCGCAGGTCGGAGGGGTGCATAAGCGAGCCCATGACCTaGACATTCCCGTGCACAACCAGCGCCTCATCCGGCCGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SLARRSEGCISEPMT*TFPCTTSASSGRSV
Trigger: CACAGACCGGCCGGATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGTCATGGGCTCGCTTATGCACCCCTCCGACCTGCGCGCCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS TCA 72 bp CCAAGGTGCGGACAGCAGAACCTGGGGCCGAGCTGGTaGGGCTGGTGGTCACCAGCAGCAAAGAGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: PRCGQQNLGPSW*GWWSPAAKRAV
Trigger: TACAGCCCTCTTTGCTGCTGGTGACCACCAGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGCACCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS GCA 72 bp AGGGCACCGTTGATGTCGTGGCCTTCGAAGAAGCGCTaGAGCGCCTCCGTCTCGTCCACCACCTCCATGTCC +
Preference number: 6 (lower is better)
Translates to: RAPLMSWPSKKR*SASVSSTTSMS
Trigger: GGACATGGAGGTGGTGGACGAGACGGAGGCGCTGCAGCGCTTCTTCGAAGGCCACGACATCAACGGTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000537766.1
CDS GCA 72 bp TCCCTGCCAGAGCTCTCCTCTCCTAAGCCTGAAGGCTaGAGCCCCGGGATCTGCCCCTCGGATGACTGGTGT +
Preference number: 6 (lower is better)
Translates to: SLPELSSPKPEG*SPGICPSDDWC
Trigger: ACACCAGTCATCCGAGGGGCAGATCCCGGGGCTGCAGCCTTCAGGCTTAGGAGAGGAGAGCTCTGGCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS CCA 72 bp ATGGTTCCCTGCAGGAAGCGCTGGCTGATGCAGGCCTaGTCCGGAACCACGGACGATGACTTGCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: MVPCRKRWLMQA*SGTTDDDLLAT
Trigger: GGTGGCCAGCAAGTCATCGTCCGTGGTTCCGGACCAGGCCTGCATCAGCCAGCGCTTCCTGCAGGGAACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CCA 72 bp GTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGGACCTGCCATCAGTGT +
Preference number: 6 (lower is better)
Translates to: VAPWSRGTVGAA*SQSSGWTCHQC
Trigger: ACACTGATGGCAGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265460.9
ENST00000546247.1
CDS CCA 72 bp CCAGCAGCAAAGAGGGCTGTATGCCTGGTAGCCCCGTaGTCAAGGGGGACTGTCGGAGCTGCGTGGTCCCAA +
Preference number: 6 (lower is better)
Translates to: PAAKRAVCLVAP*SRGTVGAAWSQ
Trigger: TTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTACCAGGCATACAGCCCTCTTTGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS CCA 72 bp GCTGGAACACATGTCCAAGGTGCGGACAGCAGAACCTaGGGCCGAGCTGGTGAGGCTGGTGGTCACCAGCAG +
Preference number: 6 (lower is better)
Translates to: AGTHVQGADSRT*GRAGEAGGHQQ
Trigger: CTGCTGGTGACCACCAGCCTCACCAGCTCGGCCCCAGGTTCTGCTGTCCGCACCTTGGACATGTGTTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS CCA 72 bp GAGCTGCCCTGGAGTCTGGCTGGCCGGGTGGCTGCCTaGAACCTTTGGTCAAAGCCAGGCCTAAGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: ELPWSLAGRVAA*NLWSKPGLRFS
Trigger: GCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAGGGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp GGCCCCTACGTTCTCCATGAAGATGCGCTCCTGCCATaGGCCATGGGCCATGGGCCATGGGCCAACACAGAG +
Preference number: 6 (lower is better)
Translates to: GPYVLHEDALLP*AMGHGPWANTE
Trigger: CTCTGTGTTGGCCCATGGCCCATGGCCCATGGCCCATGGCAGGAGCGCATCTTCATGGAGAACGTAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS CAA 72 bp CGCAGGTCGGAGGGGTGCATAAGCGAGCCCATGACCTaGACATTCCCGTGCACAACCAGCGCCTCATCCGGC +
Preference number: 6 (lower is better)
Translates to: RRSEGCISEPMT*TFPCTTSASSG
Trigger: GCCGGATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGTCATGGGCTCGCTTATGCACCCCTCCGACCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CAA 72 bp AATTGCTCGGTGGTGTCCACCTCCTGCACGTGTTCCTaGGCGCGCAGGTCGGAGGGGTGCATAAGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: NCSVVSTSCTCS*ARRSEGCISEP
Trigger: GGGCTCGCTTATGCACCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGGAGGTGGACACCACCGAGCAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CAA 72 bp CTGGAGTCTGGCTGGCCGGGTGGCTGCCTGGAACCTTaGGTCAAAGCCAGGCCTAAGGTTCAGCCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LESGWPGGCLEP*VKARPKVQPWV
Trigger: GACCCAGGGCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTCCAGGCAGCCACCCGGCCAGCCAGACTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 90 bp TGCAGGCCGGGCGAGGGGGCCACTCACAGGTCGGAGGCATCCTCCTaGCTGATGTACTCCTCCAGGATGCTGGTGTCTATGTTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: CRPGEGATHRSEASS*LMYSSRMLVSMLEG
Trigger: GCCCTCCAACATAGACACCAGCATCCTGGAGGAGTACATCAGCAAGGAGGATGCCTCCGACCTGTGAGTGGCCCCCTCGCCCGGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 90 bp CTCTATAACTCCCAGCTTCTGCTCCTTGCCCATTTTGGGGCCCAGTaGTGCCAGGAGAGAAGCAGCTCGGGCCTGGCCGGCCCGCAGCTT +
Preference number: 6 (lower is better)
Translates to: LYNSQLLLLAHFGAQ*CQERSSSGLAGPQL
Trigger: AAGCTGCGGGCCGGCCAGGCCCGAGCTGCTTCTCTCCTGGCACAACTGGGCCCCAAAATGGGCAAGGAGCAGAAGCTGGGAGTTATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS TCA 72 bp CTGGCCTGGGTTGGAGGCCCGCACAATGATGCGCTCTaGGATCTGGGCGGCCAGCGTGTAGTTCTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: LAWVGGPHNDAL*DLGGQRVVLVL
Trigger: CAGAACCAGAACTACACGCTGGCCGCCCAGATCTCAGAGCGCATCATTGTGCGGGCCTCCAACCCAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS TCA 72 bp GCTTGCACAGCTCCTTCACGGCCCCTACGTTCTCCATaGAGATGCGCTCCTGCCATGGGCCATGGGCCATGG +
Preference number: 6 (lower is better)
Translates to: ACTAPSRPLRSP*RCAPAMGHGPW
Trigger: CCATGGCCCATGGCCCATGGCAGGAGCGCATCTTCATGGAGAACGTAGGGGCCGTGAAGGAGCTGTGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS GCA 72 bp CTGAAGTGCAGCCGCCCCACAGTCACCTTCGTGACCTaGTCAGGGGGCAGATTGACCGTGACCGGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: LKCSRPTVTFVT*SGGRLTVTGLK
Trigger: CTTCAACCCGGTCACGGTCAATCTGCCCCCTGAGCAGGTCACGAAGGTGACTGTGGGGCGGCTGCACTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp TCCTGCACGTGTTCCTTGGCGCGCAGGTCGGAGGGGTaGATAAGCGAGCCCATGACCTTGACATTCCCGTGC +
Preference number: 6 (lower is better)
Translates to: SCTCSLARRSEG*ISEPMTLTFPC
Trigger: GCACGGGAATGTCAAGGTCATGGGCTCGCTTATGCACCCCTCCGACCTGCGCGCCAAGGAACACGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp TGGCCACAGTACACGTCAGCTGGATGCGTAAGTGGGTaGGCTTGGCGCGCGTGCACGGGTATGCAGGTGTTC +
Preference number: 6 (lower is better)
Translates to: WPQYTSAGCVSG*AWRACTGMQVF
Trigger: GAACACCTGCATACCCGTGCACGCGCGCCAAGCCCACCCACTTACGCATCCAGCTGACGTGTACTGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp GTAGCCCCGTGGTCAAGGGGGACTGTCGGAGCTGCGTaGTCCCAAAGCTCTGGCTGGACCCATCAGTGTCTA +
Preference number: 6 (lower is better)
Translates to: VAPWSRGTVGAA*SQSSGWTHQCL
Trigger: TAGACACTGATGGGTCCAGCCAGAGCTTTGGGACCACGCAGCTCCGACAGTCCCCCTTGACCACGGGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS CAA 72 bp CCTCACAGGGTGGCATGCAGCCTGGCTGCAGGCAGCTaGCCCATCTACCTGAGGCTTTGGCTGTGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: PHRVACSLAAGS*PIYLRLWLCVC
Trigger: ACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGCAGCCAGGCTGCATGCCACCCTGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CAA 90 bp GGCTGTCTCCCTCACAGGGTGGCATGCAGCCTGGCTGCAGGCAGCTaGCCCATCTACCTGAGGCTTTGGCTGTGCGTCTGTGATGTGGTT +
Preference number: 6 (lower is better)
Translates to: GCLPHRVACSLAAGS*PIYLRLWLCVCDVV
Trigger: AACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGCAGCCAGGCTGCATGCCACCCTGTGAGGGAGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp GGGTTGAAGGGCCGCTTGCTCCGGTCTGACTGGGACTaGTCGATGTTAATGGACTGGTTCAGGGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GLKGRLLRSDWD*SMLMDWFRASS
Trigger: GCTGGAGGCCCTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp GGGTGCATAAGCGAGCCCATGACCTTGACATTCCCGTaGACAACCAGCGCCTCATCCGGCCGGTCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: GCISEPMTLTFP*TTSASSGRSVL
Trigger: CAACACAGACCGGCCGGATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGTCATGGGCTCGCTTATGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp TGCCTCCCACTTCCCCACACCGGCACTCACTTCATCTaGAGAGTCAGGCTGAGGTGCAGTGGGGTGCCACTA +
Preference number: 6 (lower is better)
Translates to: CLPLPHTGTHFI*RVRLRCSGVPL
Trigger: TAGTGGCACCCCACTGCACCTCAGCCTGACTCTGCAGATGAAGTGAGTGCCGGTGTGGGGAAGTGGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539361.1
ENST00000675345.1
CDS CCA 72 bp GTGACCGGGTTGAAGGGCCGCTTGCTCCGGTCTGACTaGGACTGCTCGATGTTAATGGACTGGTTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: VTGLKGRLLRSD*DCSMLMDWFRA
Trigger: GGCCCTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCCGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CAA 72 bp GGGGGCAGATTGACCGTGACCGGGTTGAAGGGCCGCTaGCTCCGGTCTGACTGGGACTGCTCGATGTTAATG +
Preference number: 6 (lower is better)
Translates to: GGRLTVTGLKGR*LRSDWDCSMLM
Trigger: CATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCCGGTCACGGTCAATCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CAA 72 bp CTCCAGCGCTCCAGCTCATCAATGCGCGTCTCCAGGTaGTCTGTCAGCTTGCACAGCTCCTTCACGGCCCCT +
Preference number: 6 (lower is better)
Translates to: LQRSSSSMRVSR*SVSLHSSFTAP
Trigger: AGGGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCTGGAGACGCGCATTGATGAGCTGGAGCGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 72 bp ATGCTGGTGTCTATGTTGGAGGGCTCCAGGGCACCGTaGATGTCGTGGCCTTCGAAGAAGCGCTGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: MLVSMLEGSRAP*MSWPSKKRCSA
Trigger: GGCGCTGCAGCGCTTCTTCGAAGGCCACGACATCAACGGTGCCCTGGAGCCCTCCAACATAGACACCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000537766.1
CDS CAA 72 bp GGGCTCGGGCCTCCCTCAGAAGCACCCCCACCTCTGTaGCAGGTGCTTTCTGCACGTCTTTTCTCCCTCACT +
Preference number: 6 (lower is better)
Translates to: GLGPPSEAPPPL*QVLSARLFSLT
Trigger: AGTGAGGGAGAAAAGACGTGCAGAAAGCACCTGCAACAGAGGTGGGGGTGCTTCTGAGGGAGGCCCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CAA 72 bp GGCGAGGGGGCCACTCACAGGTCGGAGGCATCCTCCTaGCTGATGTACTCCTCCAGGATGCTGGTGTCTATG +
Preference number: 6 (lower is better)
Translates to: GEGATHRSEASS*LMYSSRMLVSM
Trigger: CATAGACACCAGCATCCTGGAGGAGTACATCAGCAAGGAGGATGCCTCCGACCTGTGAGTGGCCCCCTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 72 bp ACAGTACACGTCAGCTGGATGCGTAAGTGGGTGGGCTaGGCGCGCGTGCACGGGTATGCAGGTGTTCCCATG +
Preference number: 6 (lower is better)
Translates to: TVHVSWMRKWVG*ARVHGYAGVPM
Trigger: CATGGGAACACCTGCATACCCGTGCACGCGCGCCAAGCCCACCCACTTACGCATCCAGCTGACGTGTACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 90 bp AGCTTGTGGCTCCAGCGCTCCAGCTCATCAATGCGCGTCTCCAGGTaGTCTGTCAGCTTGCACAGCTCCTTCACGGCCCCTACGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SLWLQRSSSSMRVSR*SVSLHSSFTAPTFS
Trigger: GGAGAACGTAGGGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCTGGAGACGCGCATTGATGAGCTGGAGCGCTGGAGCCACAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 90 bp CTTGTATCTGTAGTGCACCAGCCGCATGCGCGAGATCCTCTTCAATaGCTCGGTGGTGTCCACCTGCGGGGAGCCAGGCCCGGGAATGAA +
Preference number: 6 (lower is better)
Translates to: LVSVVHQPHARDPLQ*LGGVHLRGARPGNE
Trigger: TTCATTCCCGGGCCTGGCTCCCCGCAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACTACAGATACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389602.4
CDS CAA 90 bp CCTGTGGCCACAGTACACGTCAGCTGGATGCGTAAGTGGGTGGGCTaGGCGCGCGTGCACGGGTATGCAGGTGTTCCCATGAAGGTAAAC +
Preference number: 6 (lower is better)
Translates to: PVATVHVSWMRKWVG*ARVHGYAGVPMKVN
Trigger: GTTTACCTTCATGGGAACACCTGCATACCCGTGCACGCGCGCCAAGCCCACCCACTTACGCATCCAGCTGACGTGTACTGTGGCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS TCA 72 bp GACCGTGACCGGGTTGAAGGGCCGCTTGCTCCGGTCTaGCTGGGACTGCTCGATGTTAATGGACTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: DRDRVEGPLAPV*LGLLDVNGLVQ
Trigger: CTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAGCAAGCGGCCCTTCAACCCGGTCACGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS TCA 72 bp GCCTGCAGGCATCCCCTGGAGCACAGTACTGGGAGGTaGTGGACATCGAATTCTCCAGCACCTGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: ACRHPLEHSTGR*WTSNSPAPGWR
Trigger: CCTCCATCCAGGTGCTGGAGAATTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000539361.1
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS GCA 72 bp TGGCCAGCTTGTGGCTCCAGCGCTCCAGCTCATCAATaGGCGTCTCCAGGTTGTCTGTCAGCTTGCACAGCT +
Preference number: 6 (lower is better)
Translates to: WPACGSSAPAHQ*ASPGCLSACTA
Trigger: AGCTGTGCAAGCTGACAGACAACCTGGAGACGCGCATTGATGAGCTGGAGCGCTGGAGCCACAAGCTGGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS GCA 72 bp GTGTGCAGGAGCCCGCTCGAGGCCTGTGTTCCTGACTaGGGGCATCTCTCCCAGTTCTGGGTTCAGAAACAT +
Preference number: 6 (lower is better)
Translates to: VCRSPLEACVPD*GHLSQFWVQKH
Trigger: ATGTTTCTGAACCCAGAACTGGGAGAGATGCCCGCAGTCAGGAACACAGGCCTCGAGCGGGCTCCTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp GGCTCGGGCCTCCCTCAGAAGCACCCCCACCTCTGTTaGAGGTGCTTTCTGCACGTCTTTTCTCCCTCACTA +
Preference number: 6 (lower is better)
Translates to: GSGLPQKHPHLC*RCFLHVFSPSL
Trigger: TAGTGAGGGAGAAAAGACGTGCAGAAAGCACCTGCAACAGAGGTGGGGGTGCTTCTGAGGGAGGCCCGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp GCAGGCAGCTTGCCCATCTACCTGAGGCTTTGGCTGTaGGTCTGTGATGTGGTTTCAGGCCCGAGCACCATG +
Preference number: 6 (lower is better)
Translates to: AGSLPIYLRLWL*VCDVVSGPSTM
Trigger: CATGGTGCTCGGGCCTGAAACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp TTCCCAGGCCTGCAGGCATCCCCTGGAGCACAGTACTaGGAGGTGATGGACATCGAATTCTCCAGCACCTGG +
Preference number: 6 (lower is better)
Translates to: FPGLQASPGAQY*EVMDIEFSSTW
Trigger: CCAGGTGCTGGAGAATTCGATGTCCATCACCTCCCAGTACTGTGCTCCAGGGGATGCCTGCAGGCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000539361.1
ENST00000675319.1
ENST00000675345.1
ENST00000675792.1
CDS CAA 90 bp CAGCGCTCCAGCTCATCAATGCGCGTCTCCAGGTTGTCTGTCAGCTaGCACAGCTCCTTCACGGCCCCTACGTTCTCCATGAAGATGCGC +
Preference number: 6 (lower is better)
Translates to: QRSSSSMRVSRLSVS*HSSFTAPTFSMKMR
Trigger: GCGCATCTTCATGGAGAACGTAGGGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCTGGAGACGCGCATTGATGAGCTGGAGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS CAA 90 bp TGGCCAATGCCATTGACTGAAAGACCCCAGGACTTGGCTCTGATGTaGGTGACTGGCAGAAGGGCCATCTGGCTGGGGCCTGAGCGGTTG +
Preference number: 6 (lower is better)
Translates to: WPMPLTERPQDLALM*VTGRRAIWLGPERL
Trigger: CAACCGCTCAGGCCCCAGCCAGATGGCCCTTCTGCCAGTCACCAACATCAGAGCCAAGTCCTGGGGTCTTTCAGTCAATGGCATTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS TCA 72 bp AGGGGGCCACTCACAGGTCGGAGGCATCCTCCTTGCTaGTGTACTCCTCCAGGATGCTGGTGTCTATGTTGG +
Preference number: 6 (lower is better)
Translates to: RGPLTGRRHPPC*CTPPGCWCLCW
Trigger: CCAACATAGACACCAGCATCCTGGAGGAGTACATCAGCAAGGAGGATGCCTCCGACCTGTGAGTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp TCGCCCAGCATGCCGATGTACACTGTCACCTGGAAGTaGTTCTTCTTCTGGCACACAAAGGCGTCGTCGCCC +
Preference number: 6 (lower is better)
Translates to: SPSMPMYTVTWK*FFFWHTKASSP
Trigger: GGGCGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGTGTACATCGGCATGCTGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp CTCCGGTCTGACTGGGACTGCTCGATGTTAATGGACTaGTTCAGGGCCTCCAGCTTCACTCCGTGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LRSDWDCSMLMD*FRASSFTPCSF
Trigger: GAAGCTGCACGGAGTGAAGCTGGAGGCCCTGAACCAGTCCATTAACATCGAGCAGTCCCAGTCAGACCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp TACTGGGAGGTGATGGACATCGAATTCTCCAGCACCTaGATGGAGGTCAGGGAGGGCACTGGCTCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: YWEVMDIEFSST*MEVREGTGSAR
Trigger: CCTTGCAGAGCCAGTGCCCTCCCTGACCTCCATCCAGGTGCTGGAGAATTCGATGTCCATCACCTCCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278836.10
ENST00000539361.1
ENST00000675319.1
CDS CCA 72 bp AGGGAGGAGCTCACCATCCAGTTCTCCCAGAAGAGGTaGCCAAACATGGAACCTGAGGGGCCCTCTGATGCT +
Preference number: 6 (lower is better)
Translates to: REELTIQFSQKR*PNMEPEGPSDA
Trigger: AGCATCAGAGGGCCCCTCAGGTTCCATGTTTGGCCACCTCTTCTGGGAGAACTGGATGGTGAGCTCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp TTCAGGCCCGAGCACCATGTCTGCTGTGTGTCTAGCTaGGCTCTCCCTCTGTCTTGGACCCTGTCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: FRPEHHVCCVSS*ALPLSWTLSLL
Trigger: CAGAAGAGACAGGGTCCAAGACAGAGGGAGAGCCCAGCTAGACACACAGCAGACATGGTGCTCGGGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp GCAGGGAACTATGGAGATTTCGGAGGAGTCAGTGGCTaGGAAGGGACGAGGAGCAGCTTTCAGAGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: AGNYGDFGGVSG*EGTRSSFQRWD
Trigger: GTCCCACCTCTGAAAGCTGCTCCTCGTCCCTTCCCAGCCACTGACTCCTCCGAAATCTCCATAGTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp CCCTGCAGGGAACTATGGAGATTTCGGAGGAGTCAGTaGCTGGGAAGGGACGAGGAGCAGCTTTCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: PCRELWRFRRSQ*LGRDEEQLSEV
Trigger: CACCTCTGAAAGCTGCTCCTCGTCCCTTCCCAGCCACTGACTCCTCCGAAATCTCCATAGTTCCCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp GAAGGCTGCAGCCCCGGGATCTGCCCCTCGGATGACTaGTGTCTCAGATGTCAGCACTTCACTATTCAGCTG +
Preference number: 6 (lower is better)
Translates to: EGCSPGICPSDD*CLRCQHFTIQL
Trigger: CAGCTGAATAGTGAAGTGCTGACATCTGAGACACCAGTCATCCGAGGGGCAGATCCCGGGGCTGCAGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS CAA 72 bp GTAGTGCACCAGCCGCATGCGCGAGATCCTCTTCAATaGCTCGGTGGTGTCCACCTCCTGCACGTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: VVHQPHARDPLQ*LGGVHLLHVFL
Trigger: AAGGAACACGTGCAGGAGGTGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CAA 90 bp GCATCCTCCTTGCTGATGTACTCCTCCAGGATGCTGGTGTCTATGTaGGAGGGCTCCAGGGCACCGTTGATGTCGTGGCCTTCGAAGAAG +
Preference number: 6 (lower is better)
Translates to: ASSLLMYSSRMLVSM*EGSRAPLMSWPSKK
Trigger: CTTCTTCGAAGGCCACGACATCAACGGTGCCCTGGAGCCCTCCAACATAGACACCAGCATCCTGGAGGAGTACATCAGCAAGGAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278836.10
ENST00000537766.1
CDS TCA 72 bp GGGACTGCAGGGCTGGCCAGAGGCTCCAGACTCTTGTaGTGCTTGGAGTGGCCAATGCCATTGACTGAAAGA +
Preference number: 6 (lower is better)
Translates to: GTAGLARGSRLL*CLEWPMPLTER
Trigger: TCTTTCAGTCAATGGCATTGGCCACTCCAAGCATCACAAGAGTCTGGAGCCTCTGGCCAGCCCTGCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000537318.5
ENST00000546247.1
ENST00000675319.1
ENST00000675345.1
CDS TCA 72 bp ATTTGCTGGACCTGGTACGTTTTCAGCTCTGAGGCATaGCCCAGGGACCCAAGGACCCCAACAGGATCCAGG +
Preference number: 6 (lower is better)
Translates to: ICWTWYVFSSEA*PRDPRTPTGSR
Trigger: CCTGGATCCTGTTGGGGTCCTTGGGTCCCTGGGTCATGCCTCAGAGCTGAAAACGTACCAGGTCCAGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS TCA 72 bp CTTGCCCATCTACCTGAGGCTTTGGCTGTGCGTCTGTaGTGTGGTTTCAGGCCCGAGCACCATGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LAHLPEALAVRL*CGFRPEHHVCC
Trigger: ACAGCAGACATGGTGCTCGGGCCTGAAACCACATCACAGACGCACAGCCAAAGCCTCAGGTAGATGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp TTCTTACGCATGTTGTTAGCGGTGGTCTCGCTGAAGTaGAGCCGCCCCACAGTCACCTTCGTGACCTGCTCA +
Preference number: 6 (lower is better)
Translates to: FLRMLLAVVSLK*SRPTVTFVTCS
Trigger: TGAGCAGGTCACGAAGGTGACTGTGGGGCGGCTGCACTTCAGCGAGACCACCGCTAACAACATGCGTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS GCA 72 bp CGAACTCGGGCTTGTATCTGTAGTGCACCAGCCGCATaGGCGAGATCCTCTTCAATTGCTCGGTGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: RTRACICSAPAA*ARSSSIARWCP
Trigger: TGGACACCACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCACTACAGATACAAGCCCGAGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000675319.1
CDS GCA 72 bp CCATCATTGCACTCATCCACATTAGCACCTGTGATCTaGTGTCTTCCCCACGTCTCCAGCACGGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: PSLHSSTLAPVI*CLPHVSSTAGL
Trigger: CAGCCCTGCCGTGCTGGAGACGTGGGGAAGACAGCAGATCACAGGTGCTAATGTGGATGAGTGCAATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp CGTCAGCCCTCATCACTCCCATGCTTAGAAGCTTTGTaGCTGCCCACTGCCTCAGAACAAAGCCCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: RQPSSLPCLEAL*LPTASEQSPGV
Trigger: GACTCCTGGGCTTTGTTCTGAGGCAGTGGGCAGCCACAAAGCTTCTAAGCATGGGAGTGATGAGGGCTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CAA 72 bp TTGCTGATGTACTCCTCCAGGATGCTGGTGTCTATGTaGGAGGGCTCCAGGGCACCGTTGATGTCGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LLMYSSRMLVSM*EGSRAPLMSWP
Trigger: AGGCCACGACATCAACGGTGCCCTGGAGCCCTCCAACATAGACACCAGCATCCTGGAGGAGTACATCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000537766.1
CDS CAA 72 bp AGCTCATCAATGCGCGTCTCCAGGTTGTCTGTCAGCTaGCACAGCTCCTTCACGGCCCCTACGTTCTCCATG +
Preference number: 6 (lower is better)
Translates to: SSSMRVSRLSVS*HSSFTAPTFSM
Trigger: CATGGAGAACGTAGGGGCCGTGAAGGAGCTGTGCAAGCTGACAGACAACCTGGAGACGCGCATTGATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000536352.5
ENST00000537318.5
ENST00000675319.1
CDS TCA 72 bp GCTTGCACAGCTCCTTCACGGCCCCTACGTTCTCCATaGAGATGCGCTCCTTGTTCACCACCAGGAAGTTCT +
Preference number: 6 (lower is better)
Translates to: ACTAPSRPLRSP*RCAPCSPPGSS
Trigger: AGAACTTCCTGGTGGTGAACAAGGAGCGCATCTTCATGGAGAACGTAGGGGCCGTGAAGGAGCTGTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000675319.1
CDS GCA 72 bp GCCCTAGGACTACCCAGTTCCCATGAGCCTGACGTCTaGCTCCTCAAAAGAACTGGAACACCCAGAAGTAGG +
Preference number: 6 (lower is better)
Translates to: ALGLPSSHEPDV*LLKRTGTPRSR
Trigger: CCTACTTCTGGGTGTTCCAGTTCTTTTGAGGAGGCAGACGTCAGGCTCATGGGAACTGGGTAGTCCTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp ATCCATCAGATGAAAGTTGGTGAGAGCAGAGCTGCCTaGTTGAAGCCAGGAAGCCTCCCAGCCTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: IHQMKVGESRAA*LKPGSLPASPS
Trigger: TGAAGGGGAGGCTGGGAGGCTTCCTGGCTTCAACCAGGCAGCTCTGCTCTCACCAACTTTCATCTGATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp GAACCTTTGGTCAAAGCCAGGCCTAAGGTTCAGCCCTaGGTCAGGCCCTTGGTGTGGACTCCTCAGAAAGAT +
Preference number: 6 (lower is better)
Translates to: EPLVKARPKVQP*VRPLVWTPQKD
Trigger: ATCTTTCTGAGGAGTCCACACCAAGGGCCTGACCCAGGGCTGAACCTTAGGCCTGGCTTTGACCAAAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537766.1
CDS CCA 72 bp CCGATGTACACTGTCACCTGGAAGTGGTTCTTCTTCTaGCACACAAAGGCGTCGTCGCCCACCGAAAAGTTG +
Preference number: 6 (lower is better)
Translates to: PMYTVTWKWFFF*HTKASSPTEKL
Trigger: CAACTTTTCGGTGGGCGACGACGCCTTTGTGTGCCAGAAGAAGAACCACTTCCAGGTGACAGTGTACATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000675319.1
CDS CCA 72 bp ACTGGTGTCTCAGATGTCAGCACTTCACTATTCAGCTaGGGTGGAGACCTATTACATGCCTCCTTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: TGVSDVSTSLFS*GGDLLHASLAP
Trigger: GGGCGCCAAGGAGGCATGTAATAGGTCTCCACCCCAGCTGAATAGTGAAGTGCTGACATCTGAGACACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS GCA 72 bp TTGTGGAGAAGGCTTTACTCTATAACTCCCAGCTTCTaGTCCTTGCCCATTTTGGGGCCCAGTTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: LWRRLYSITPSF*SLPILGPSCAR
Trigger: CCTGGCACAACTGGGCCCCAAAATGGGCAAGGAGCAGAAGCTGGGAGTTATAGAGTAAAGCCTTCTCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp TATTCAGCTGGGGTGGAGACCTATTACATGCCTCCTTaGCGCCCAGACTCAGGACAGGTAAGTGACAAACGT +
Preference number: 6 (lower is better)
Translates to: YSAGVETYYMPP*RPDSGQVSDKR
Trigger: ACGTTTGTCACTTACCTGTCCTGAGTCTGGGCGCCAAGGAGGCATGTAATAGGTCTCCACCCCAGCTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS CCA 72 bp TGTCTCAGATGTCAGCACTTCACTATTCAGCTGGGGTaGAGACCTATTACATGCCTCCTTGGCGCCCAGACT +
Preference number: 6 (lower is better)
Translates to: CLRCQHFTIQLG*RPITCLLGAQT
Trigger: AGTCTGGGCGCCAAGGAGGCATGTAATAGGTCTCCACCCCAGCTGAATAGTGAAGTGCTGACATCTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536352.5
ENST00000537318.5
CDS TCA 72 bp CAGCTCAAATGTCACCAACTCCAGAGAAGTTTTCCCTaGTCCTCCCCACCTTCGTCCGGATTAAGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: QLKCHQLQRSFP*SSPPSSGLSVL
Trigger: GAGGACACTTAATCCGGACGAAGGTGGGGAGGATCAGGGAAAACTTCTCTGGAGTTGGTGACATTTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS GCA 72 bp ACAGGACTTCTTGCTCATCTAGTTCACATACAGTCTTaGTGCTGCCTGACTATCCACCCAGGAAGGGGGAAG +
Preference number: 6 (lower is better)
Translates to: TGLLAHLVHIQS*CCLTIHPGRGK
Trigger: CTTCCCCCTTCCTGGGTGGATAGTCAGGCAGCAGCAAGACTGTATGTGAACTAGATGAGCAAGAAGTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CCA 72 bp CTACTTCCCTTCATTTGTCCTGAGCGTCTTCTCCCATaGCCTCTTAGGCTCAAGAAGAAACTGGGGGTCCAT +
Preference number: 6 (lower is better)
Translates to: LLPFICPERLLP*PLRLKKKLGVH
Trigger: ATGGACCCCCAGTTTCTTCTTGAGCCTAAGAGGCCATGGGAGAAGACGCTCAGGACAAATGAAGGGAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CAA 72 bp GACAGGACTTCTTGCTCATCTAGTTCACATACAGTCTaGCTGCTGCCTGACTATCCACCCAGGAAGGGGGAA +
Preference number: 6 (lower is better)
Translates to: DRTSCSSSSHTV*LLPDYPPRKGE
Trigger: TTCCCCCTTCCTGGGTGGATAGTCAGGCAGCAGCAAGACTGTATGTGAACTAGATGAGCAAGAAGTCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CAA 72 bp AGAAGGCTTTACTCTATAACTCCCAGCTTCTGCTCCTaGCCCATTTTGGGGCCCAGTTGTGCCAGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: RRLYSITPSFCS*PILGPSCARRE
Trigger: TTCTCTCCTGGCACAACTGGGCCCCAAAATGGGCAAGGAGCAGAAGCTGGGAGTTATAGAGTAAAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS CAA 90 bp GCAGGCCTGATTCCTGATCCTTATTCTGTGCTCAGCAAACGTCTATaGACTGACAAGTCTGAACCCAGACAGTCACATGACTGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: AGLIPDPYSVLSKRL*TDKSEPRQSHDWAE
Trigger: CTCAGCCCAGTCATGTGACTGTCTGGGTTCAGACTTGTCAGTCAATAGACGTTTGCTGAGCACAGAATAAGGATCAGGAATCAGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS CCA 72 bp AGATGCGCTCCTTGTTCACCACCAGGAAGTTCTCTATaGTTTTCCCATTGGCAAAGACCATGTCTCCGGTGT +
Preference number: 6 (lower is better)
Translates to: RCAPCSPPGSSL*FSHWQRPCLRC
Trigger: ACACCGGAGACATGGTCTTTGCCAATGGGAAAACCATAGAGAACTTCCTGGTGGTGAACAAGGAGCGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265460.9
ENST00000278836.10
ENST00000389602.4
ENST00000675319.1
CDS GCA 72 bp AAGTGTGACAAGTCAGATGGGGGAGACAGGACTTCTTaGTCATCTAGTTCACATACAGTCTTGCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: KCDKSDGGDRTS*SSSSHTVLLLP
Trigger: AGGCAGCAGCAAGACTGTATGTGAACTAGATGAGCAAGAAGTCCTGTCTCCCCCATCTGACTTGTCACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS TCA 72 bp AAGTATTTCATTAGCCCCATCCTCAGTACAATCCAGTaGCACAGTGCTGCTACTAGCCCCATCTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: KYFISPILSTIQ*HSAATSPIFWM
Trigger: CATCCAGAAGATGGGGCTAGTAGCAGCACTGTGTCACTGGATTGTACTGAGGATGGGGCTAATGAAATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539361.1
CDS TCA 72 bp GGACTAAATGGGATGATCTATGTAAGGCTGCAGGCCTaGTTCCTGATCCTTATTCTGTGCTCAGCAAACGTC +
Preference number: 6 (lower is better)
Translates to: GLNGMIYVRLQA*FLILILCSANV
Trigger: GACGTTTGCTGAGCACAGAATAAGGATCAGGAATCAGGCCTGCAGCCTTACATAGATCATCCCATTTAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS TCA 72 bp TTCCTGATCCTTATTCTGTGCTCAGCAAACGTCTATTaGCTGACAAGTCTGAACCCAGACAGTCACATGACT +
Preference number: 6 (lower is better)
Translates to: FLILILCSANVY*LTSLNPDSHMT
Trigger: AGTCATGTGACTGTCTGGGTTCAGACTTGTCAGTCAATAGACGTTTGCTGAGCACAGAATAAGGATCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS CAA 72 bp ATTCCTGATCCTTATTCTGTGCTCAGCAAACGTCTATaGACTGACAAGTCTGAACCCAGACAGTCACATGAC +
Preference number: 6 (lower is better)
Translates to: IPDPYSVLSKRL*TDKSEPRQSHD
Trigger: GTCATGTGACTGTCTGGGTTCAGACTTGTCAGTCAATAGACGTTTGCTGAGCACAGAATAAGGATCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537318.5
CDS TCA 72 bp AATAGGAACAACAATTCCTTTCTTGCAGGAGTGCTGTaGGGACTAAATGGGATGATCTATGTAAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: NRNNNSFLAGVL*GLNGMIYVRLQ
Trigger: CTGCAGCCTTACATAGATCATCCCATTTAGTCCTCACAGCACTCCTGCAAGAAAGGAATTGTTGTTCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537318.5
ENST00000539361.1