RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYPN (Homo sapiens)

Ensembl gene IDs: ENSG00000138347

Ensembl transcript IDs: ENST00000354393.6, ENST00000358913.10, ENST00000373675.3, ENST00000540630.5, ENST00000613327.4

Found 1064 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTTTGCCACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTaGTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCAC +
Preference number: 1 (lower is better)
Translates to: SLPQVQQCGNLLNFG*LETTKSGLFSFPLH
Trigger: GTGGAGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGTGGCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR CCA 90 bp GTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCTCCACAGTCCGCTCTCTTACACAGC +
Preference number: 1 (lower is better)
Translates to: VWELTQLRLLGNHQV*LVLIPPPQSALLHS
Trigger: GCTGTGTAAGAGAGCGGACTGTGGAGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 90 bp AAAGGTGATGGTGACCTGTCCGCCTTTCTCCTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGGTCACTACTGCCTAGCTCTTCTCAG +
Preference number: 1 (lower is better)
Translates to: KGDGDLSAFLLGIVW*VSHILRSLLPSSSQ
Trigger: CTGAGAAGAGCTAGGCAGTAGTGACCTTAGGATATGACTAACTCACCAAACAATGCCAAGGAGAAAGGCGGACAGGTCACCATCACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR GCA 90 bp TTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAATaGCAGCTGAGTGTGCTTGGCACAGACAGCACCAGGGATTCCAGC +
Preference number: 1 (lower is better)
Translates to: FQAFLSSYCLFTQIQ*QLSVLGTDSTRDSS
Trigger: GCTGGAATCCCTGGTGCTGTCTGTGCCAAGCACACTCAGCTGGCATTGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 90 bp CAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTaGCACCTTATTATGTGGCTCAGTACACCCAGGATATGCAAATCA +
Preference number: 1 (lower is better)
Translates to: QYQVFQQVFGISSTF*HLIMWLSTPRICKS
Trigger: TGATTTGCATATCCTGGGTGTACTGAGCCACATAATAAGGTGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 90 bp CCAGTGAATGAATTTATTTTTATGCTGGAAATCCTTGCCTTGAAGTaGAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACA +
Preference number: 1 (lower is better)
Translates to: PVNEFIFMLEILALK*RQFQAFLSSYCLFT
Trigger: TGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCACTTCAAGGCAAGGATTTCCAGCATAAAAATAAATTCATTCACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCAGCCTCCCAGGTAGCTaGGATTACAGACGTGCGCCA +
Preference number: 2 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSSLPGS*DYRRAP
Trigger: TGGCGCACGTCTGTAATCCCAGCTACCTGGGAGGCT...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
3UTR CAA 90 bp CTCTTTGCCACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTaGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCA +
Preference number: 2 (lower is better)
Translates to: LFATGPAVWELTQLR*LGNHQVWLVLIPPP
Trigger: TGGAGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGTGGCAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCAGACGTGCGCCACTATaGCTGGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTRRAPL*LANFYI
Trigger: AATATAAAAATTAGCCAGGCATAGTGGCGCACGTCT...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373675.3
3UTR-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 2 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGTTTGGACTGGTGTGTaGGTGGCATATTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTVWTGV*VAYSCR
Trigger: TCTGCAGGAATATGCCACCCACACACCAGTCCAAAC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGGACTGGTGTGTGGGTaGCATATTCCTGCAGAATAT +
Preference number: 2 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTGLVCG*HIPAEY
Trigger: ATATTCTGCAGGAATATGCCACCCACACACCAGTCC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTCCCAAAGCAGTGGATaGCAACTGTGTGACATCTTT +
Preference number: 2 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTSQSSG*QLCDIF
Trigger: AAAGATGTCACACAGTTGCCATCCACTGCTTTGGGA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGCAAGAATCCCTAGCTaGCTTATTCAAAGCACTCTT +
Preference number: 2 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTARIPS*LIQSTL
Trigger: AAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTTACTCAACTTCGGTTaGTTGGAAACCACCAAGTCT +
Preference number: 2 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTLLNFG*LETTKS
Trigger: AGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACTCAGCCCAGGCATATaGCTCCTAATTGCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: ENSADKLVRPCFGHKISALSPGI*LLIAPS
Trigger: ACTAGGAGCAATTAGGAGCCATATGCCTGGGCTGAG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACCAGCTGAGTGTGCTTaGCACAGACAGCACCAGGGA +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTPAECA*HRQHQG
Trigger: TCCCTGGTGCTGTCTGTGCCAAGCACACTCAGCTGG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCATTCAAAGCACTCTTTaGCACAGGTCCAGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: ICKSKVFARIRELYGMTSIQSTL*HRSSSV
Trigger: CACACTGCTGGACCTGTGGCAAAGAGTGCTTTGAAT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 2 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGTGAGTTGTATGGCATaGCCTCCTAATGCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLVSCMA*PPNAKW
Trigger: CCACTTAGCATTAGGAGGTCATGCCATACAACTCAC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGGCAGTGTTTGGACTaGTGTGTGGGTGGCATATTC +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGQCLD*CVGGIF
Trigger: GAATATGCCACCCACACACCAGTCCAAACACTGCCC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGCAAGAATCCCTAGCTaGCTTATTCAAAGCACTCTT +
Preference number: 2 (lower is better)
Translates to: ICKSKVFARIRELYGMTSARIPS*LIQSTL
Trigger: AAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGG +
Preference number: 2 (lower is better)
Translates to: ENSADKLVRPCFGHKISALGIVW*VSHILR
Trigger: CCTTAGGATATGACTAACTCACCAAACAATGCCAAG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 2 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTACAGGTCCAGCAGTGTaGGAACTTACTCAACTTCGG +
Preference number: 2 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVTGPAV*ELTQLR
Trigger: CCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAA +
Preference number: 2 (lower is better)
Translates to: ENSADKLVRPCFGHKISAMLSGS*FGEFTK
Trigger: TTTGGTGAATTCACCAAATCAGCTTCCACTTAGCAT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAAGTACACCCAGGATATaGAAATCAAAAGTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: ENSADKLVRPCFGHKISASTPRI*KSKVFA
Trigger: GGCAAACACTTTTGATTTGCATATCCTGGGTGTACT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGACTGGTGTGTGGGTaGCATATTCCTGCAGAATAT +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGLVCG*HIPAEY
Trigger: ATATTCTGCAGGAATATGCCACCCACACACCAGTCC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAATTCAAAGCACTCTTTaGCACAGGTCCAGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEIQSTL*HRSSSV
Trigger: CACACTGCTGGACCTGTGGCAAAGAGTGCTTTGAAT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATCCCAAAGCAGTGGATaGCAACTGTGTGACATCTTT +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTSQSSG*QLCDIF
Trigger: AAAGATGTCACACAGTTGCCATCCACTGCTTTGGGA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACTCAGCCCAGGCATATaGCTCCTAATTGCTCCTAGT +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTLSPGI*LLIAPS
Trigger: ACTAGGAGCAATTAGGAGCCATATGCCTGGGCTGAG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGCAAGAATCCCTAGCTaGCTTATTCAAAGCACTCTT +
Preference number: 2 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTARIPS*LIQSTL
Trigger: AAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGG +
Preference number: 2 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTLGIVW*VSHILR
Trigger: CCTTAGGATATGACTAACTCACCAAACAATGCCAAG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGG +
Preference number: 2 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLGIVW*VSHILR
Trigger: CCTTAGGATATGACTAACTCACCAAACAATGCCAAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATGGAAGCTGATTTGGTaGATTCACCAAAACTACTGC +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTWKLIW*IHQNYC
Trigger: GCAGTAGTTTTGGTGAATTCACCAAATCAGCTTCCA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGTGAGTTGTATGGCATaGCCTCCTAATGCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTVSCMA*PPNAKW
Trigger: CCACTTAGCATTAGGAGGTCATGCCATACAACTCAC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTTACTCAACTTCGGTTaGTTGGAAACCACCAAGTCT +
Preference number: 2 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLLNFG*LETTKS
Trigger: AGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAAAGCTGGTAAGGCCATaGTTTGGCCACAAAATAAGT +
Preference number: 2 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTKLVRP*FGHKIS
Trigger: ACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR CAA 90 bp GCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTaGACACCTTATTATGTGGCTCAGTACACCCAGGATATGCAAATC +
Preference number: 2 (lower is better)
Translates to: AISSVSASFWNLKHI*TPYYVAQYTQDMQI
Trigger: GATTTGCATATCCTGGGTGTACTGAGCCACATAATAAGGTGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATGGATGGCAACTGTGTaGCATCTTTGGTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTWMATV*HLWFIC
Trigger: ACAGATGAACCAAAGATGTCACACAGTTGCCATCCA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAA +
Preference number: 2 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSMLSGS*FGEFTK
Trigger: TTTGGTGAATTCACCAAATCAGCTTCCACTTAGCAT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAA +
Preference number: 2 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTMLSGS*FGEFTK
Trigger: TTTGGTGAATTCACCAAATCAGCTTCCACTTAGCAT...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAAGTACACCCAGGATATaGAAATCAAAAGTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTSTPRI*KSKVFA
Trigger: GGCAAACACTTTTGATTTGCATATCCTGGGTGTACT...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGCAAGAATCCCTAGCTaGCTTATTCAAAGCACTCTT +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTARIPS*LIQSTL
Trigger: AAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATGGAAGCTGATTTGGTaGATTCACCAAAACTACTGC +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTWKLIW*IHQNYC
Trigger: GCAGTAGTTTTGGTGAATTCACCAAATCAGCTTCCA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR GCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATTACTCAACTTCGGTTaGTTGGAAACCACCAAGTCT +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTLLNFG*LETTKS
Trigger: AGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATATACATGTAATCGATaGAAGGTGATGGTGACCTGT +
Preference number: 2 (lower is better)
Translates to: CAISSVSASFWNLKHILTYTCNR*KVMVTC
Trigger: ACAGGTCACCATCACCTTTCATCGATTACATGTATA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR CCA 72 bp CTTACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCTCCACAGTCCGCTCTC +
Preference number: 3 (lower is better)
Translates to: LTQLRLLGNHQV*LVLIPPPQSAL
Trigger: GAGAGCGGACTGTGGAGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 72 bp GGTGACCTGTCCGCCTTTCTCCTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGGTCACTACTGCCTAGC +
Preference number: 3 (lower is better)
Translates to: GDLSAFLLGIVW*VSHILRSLLPS
Trigger: GCTAGGCAGTAGTGACCTTAGGATATGACTAACTCACCAAACAATGCCAAGGAGAAAGGCGGACAGGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATGTCCGCCTTTCTCCTaGGCATTGTTTGGTGAGTTA +
Preference number: 3 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLCPPFS*ALFGEL
Trigger: TAACTCACCAAACAATGCCAAGGAGAAAGGCGGACA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 72 bp CAGGATATGCAAATCAAAAGTGTTTGCCCGCATACGTaGGTTGTATGGCATGACCTCCTAATGCTAAGTGGA +
Preference number: 3 (lower is better)
Translates to: QDMQIKSVCPHT*VVWHDLLMLSG
Trigger: TCCACTTAGCATTAGGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCCTTTCTCCTTGGCATaGTTTGGTGAGTTAGTCATA +
Preference number: 3 (lower is better)
Translates to: ICKSKVFARIRELYGMTSPFSLA*FGELVI
Trigger: TATGACTAACTCACCAAACAATGCCAAGGAGAAAGG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGCAAATCAAAAGTGTTaGCCCGCATACGTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLANQKC*PAYVSC
Trigger: ACAACTCACGTATGCGGGCAAACACTTTTGATTTGC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR GCA 72 bp CAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTaGACTGTGCAATATCAAGTGTTTCAGCAAGTTTTT +
Preference number: 3 (lower is better)
Translates to: QAGKAMLWPQNK*TVQYQVFQQVF
Trigger: AAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGCAAATCAAAAGTGTTaGCCCGCATACGTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSANQKC*PAYVSC
Trigger: ACAACTCACGTATGCGGGCAAACACTTTTGATTTGC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAAATCTCAAGCACATTTaGACACCTTATTATGTGGCT +
Preference number: 3 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLNLKHI*TPYYVA
Trigger: AGCCACATAATAAGGTGTCAAAATGTGCTTGAGATT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 72 bp GTTGTATGGCATGACCTCCTAATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAAACTACTGCTATACAT +
Preference number: 3 (lower is better)
Translates to: VVWHDLLMLSGS*FGEFTKTTAIH
Trigger: ATGTATAGCAGTAGTTTTGGTGAATTCACCAAATCAGCTTCCACTTAGCATTAGGAGGTCATGCCATACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR CCA 72 bp GTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTaGAATCTCAAGCACATTTTGACACCTTATTATGTG +
Preference number: 3 (lower is better)
Translates to: VHCAISSVSASF*NLKHILTPYYV
Trigger: CACATAATAAGGTGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR TCA 72 bp GAATTTATTTTTATGCTGGAAATCCTTGCCTTGAAGTaGAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGT +
Preference number: 3 (lower is better)
Translates to: EFIFMLEILALK*RQFQAFLSSYC
Trigger: ACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCACTTCAAGGCAAGGATTTCCAGCATAAAAATAAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCCACCAGCCGCCTCACTaGCAGCCTGCTCCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTHQPPH*QPAPLH
Trigger: GTGAAGCGGAGCAGGCTGCCAGTGAGGCGGCTGGTG...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCGCCTCACTGGCAGCCTaGTCCGCTTCACGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTASLAA*SASRLL
Trigger: CAAGAGGCGTGAAGCGGAGCAGGCTGCCAGTGAGGC...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCCGAAATGGCAAGGGTTaGAGGAGGGCTCCGCTCGAC +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSRNGKG*RRAPLD
Trigger: GTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCG...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCGAAGGACTGCCGAAATaGCAAGGGTTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTEGLPK*QGLEEG
Trigger: GCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTC...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCCTGCTCCGTAACTTTTaGGTGAACCGGGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTLLRNF*VNRGGC
Trigger: GCAACCTCCCCGGTTCACTCAAAAGTTACGGAGCAG...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCGGTTGGGCCACCAAATaGTGGGCTTGGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSGWATK*WAWGTA
Trigger: AGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACC...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCACCAGCCGCCTCACTaGCAGCCTGCTCCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTHQPPH*QPAPLH
Trigger: GTGAAGCGGAGCAGGCTGCCAGTGAGGCGGCTGGTG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCTGGGCCACCAAATGCTaGGCTTGGGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSWATKC*AWGTAG
Trigger: TCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCA...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCGTAGCGACTGCCACTaGGCCGGACAGACATGGGCG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSRSDCH*AGQTWA
Trigger: CGCCCATGTCTGTCCGGCCCAGTGGCAGTCGCTACG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCTTCCGCAATGGTCAGTaGGTGCAGATTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTFRNGQ*VQISCL
Trigger: CAGGCAGGAAATCTGCACTCACTGACCATTGCGGAA...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGACACACAGCGGGGCTaGAACTGGTTTCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSDTQRG*NWFPLG
Trigger: CCCCAGCGGAAACCAGTTTCAGCCCCGCTGTGTGTC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTCCAGTCTCACGGGGTaGCCTTCGGGAACACCGCAG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSSLTG*PSGTPQ
Trigger: CTGCGGTGTTCCCGAAGGCCACCCCGTGAGACTGGA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCAGCCTCCCAGGTAGCTaGGATTACAGACGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATSLPGS*DYRRAP
Trigger: TGGCGCACGTCTGTAATCCCAGCTACCTGGGAGGCT...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCGTTAGGGTCGCCTTCTaGGTCAGAAGAAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSVRVAF*VRRRNP
Trigger: GGGGTTTCTTCTTCTGACTCAGAAGGCGACCCTAAC...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACACAGATGGAGGCTCTaGGTGGGGTGGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQHRWRL*VGWGGL
Trigger: CAGCCCTCCCCACCCCACTCAGAGCCTCCATCTGTG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCAGAGGCGCCCCTCATaGGCTACCATATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSQRRPS*ATISPG
Trigger: TCCTGGGGATATGGTAGCTCATGAGGGGCGCCTCTG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCACACAGGTGGGGGCATaGCTATCACGCGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSTQVGA*LSRGTP
Trigger: TGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGAGATCCGTAGCGACTaGCACTGGGCCGGACAGACA +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTEIRSD*HWAGQT
Trigger: TGTCTGTCCGGCCCAGTGGCAGTCGCTACGGATCTC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCGGCCTTTTTGCCTCCTaGGGGCTTTCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSGLFAS*GLSLEL
Trigger: CAGCTCTAAAGAAAGCCCCCAGGAGGCAAAAAGGCC...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGCCCAATCCTGGAGCTaGACCGGGGCTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTAQSWS*TGAHCG
Trigger: ACCACAATGAGCCCCGGTCCAGCTCCAGGATTGGGC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGGGTTTGGCCAGAACTaGAGGGGGCTCTTTCACGGG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTGFGQN*RGLFHG
Trigger: CCCGTGAAAGAGCCCCCTCCAGTTCTGGCCAAACCC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCGTAGCGACTGCCACTaGGCCGGACAGACATGGGCG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPRSDCH*AGQTWA
Trigger: CGCCCATGTCTGTCCGGCCCAGTGGCAGTCGCTACG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCTGCTGTTCCAGGGCGTaGTTCACTTCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSCCSRA*FTSLSL
Trigger: CAGGGATAATGAAGTGAATCACGCCCTGGAACAGCA...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCTTCATAGTACAGAGATaGAGGGGAAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTFIVQR*RGRPWC
Trigger: ACACCAGGGTCTTCCCCTTCATCTCTGTACTATGAA...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCCAGTACCACCTTACTTaGGGTGGTGGAATTCCTACC +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSQYHLT*GGGIPT
Trigger: GGTAGGAATTCCACCACCTCAAGTAAGGTGGTACTG...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCCCTGCCTGGACGATGTaGATATCTGGGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTPAWTM*ISGEFS
Trigger: TGAAAATTCCCCAGATATTCACATCGTCCAGGCAGG...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCACAGATGGAGGCTCTaGGTGGGGTGGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQHRWRL*VGWGGL
Trigger: CAGCCCTCCCCACCCCACTCAGAGCCTCCATCTGTG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGACACACAGCGGGGCTaGAACTGGTTTCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQDTQRG*NWFPLG
Trigger: CCCCAGCGGAAACCAGTTTCAGCCCCGCTGTGTGTC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCATACTGTGGCCTTTTTaGCTCCTGGGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTILWPF*LLGAFF
Trigger: AAAGAAAGCCCCCAGGAGGCAAAAAGGCCACAGTAT...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTGCTGGAGGAATGACTaGAGAGGTAGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATCWRND*RGSGRR
Trigger: TCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCA...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTACACTGCTGGATGGTTaGCACACGAGGTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISATLLDG*HTRLGH
Trigger: GTGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGT...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCACACTGCTGGATGGTTaGCACACGAGGTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSTLLDG*HTRLGH
Trigger: GTGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCATGGCTGTAAGAAGCTaGACAACCTGTCACCACCGG +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATMAVRS*TTCHHR
Trigger: CCGGTGGTGACAGGTTGTCCAGCTTCTTACAGCCAT...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATTKCWA*GTAGGM
Trigger: CATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGT...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTGGGCCACCAAATGCTaGGCTTGGGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSWATKC*AWGTAG
Trigger: TCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTGGGCCACCAAATGCTaGGCTTGGGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTWATKC*AWGTAG
Trigger: TCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGTTGCCACACGAGGTTaGGCCACCAAATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSVATRG*ATKCWA
Trigger: AGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAAC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCCCTGCAAGTAATTGGTaGGGCTCTGACACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATPASNW*GSDTAG
Trigger: TCCAGCAGTGTCAGAGCCCCACCAATTACTTGCAGG...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCGTAGCGACTGCCACTaGGCCGGACAGACATGGGCG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQRSDCH*AGQTWA
Trigger: CGCCCATGTCTGTCCGGCCCAGTGGCAGTCGCTACG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCGAAATCATCTTTACCTaGCTCTGCCATGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTEIIFT*LCHGSR
Trigger: CCTCGATCCATGGCAGAGCCAGGTAAAGATGATTTC...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCCCAAAGGGTCGTAATTaGTGGCCAGTCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSPKGRN*WPVLPN
Trigger: ATTTGGCAAGACTGGCCATCAATTACGACCCTTTGG...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCAGTCGTTTTCTAGCTTaGGTTTCATCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTSRFLA*VSSAFS
Trigger: GGAGAAGGCAGATGAAACTCAAGCTAGAAAACGACT...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCTGCTCCGTAACTTTTaGGTGAACCGGGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSLLRNF*VNRGGC
Trigger: GCAACCTCCCCGGTTCACTCAAAAGTTACGGAGCAG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCTCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSSKTTS*PSEADK
Trigger: TTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGA...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCGGCCGGGCCAAGCTaGACGTCTGTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSAGPS*TSVMKE
Trigger: CTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTCGGCCGGGCCAAGCTaGACGTCTGTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSAGPS*TSVMKE
Trigger: CTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCAAAGCCACTGGGTTCTaGATCCGGCTGGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTKATGF*IRLVGE
Trigger: CTCTCCTACCAGCCGGATTCAGAACCCAGTGGCTTT...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGTCCCTGCGTCGCGCTaGGTGAGTGGGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQVPASR*VSGSMS
Trigger: GCTCATTGACCCACTCACTCAGCGCGACGCAGGGAC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCATCCAGGCACTCCACTaGAATGATAATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTIQALH*NDNYPG
Trigger: CCCTGGATAATTATCATTGCAGTGGAGTGCCTGGAT...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCTGGGCTTGGGGTACTaGTGGAGGAATGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISALGLGY*WRNDCR
Trigger: TCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAG...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGGAAGGGGCCACAGTTaGTGCGGTGGTGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQGRGHS*CGGVRG
Trigger: TCCACGAACACCACCGCAGCAACTGTGGCCCCTTCC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCCCTGGGGGTTGGCTaGCATGATGGTGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPPLGVG*HDGVVA
Trigger: GGCAACTACACCATCATGGCAGCCAACCCCCAGGGG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTACACAGGTGGGGGCATaGCTATCACGCGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPTQVGA*LSRGTP
Trigger: TGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGAGATCCGTAGCGACTaGCACTGGGCCGGACAGACA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPEIRSD*HWAGQT
Trigger: TGTCTGTCCGGCCCAGTGGCAGTCGCTACGGATCTC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACGAAATGGCAAGGGTTaGAGGAGGGCTCCGCTCGAC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQRNGKG*RRAPLD
Trigger: GTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCGAAATGGCAAGGGTTaGAGGAGGGCTCCGCTCGAC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPRNGKG*RRAPLD
Trigger: GTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGGCTTGGGGTACTGCTaGAGGAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSGLGYC*RNDCRG
Trigger: ACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTCTGACACTGCTGGATaGTTGCCACACGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSDTAG*LPHEVG
Trigger: CCCAACCTCGTGTGGCAACCATCCAGCAGTGTCAGA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGGGTGGGGAGGGCTGTaGCTCAATAGCTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQGWGGL*LNSCQV
Trigger: AACCTGGCAGCTATTGAGCCACAGCCCTCCCCACCC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGCCCAATCCTGGAGCTaGACCGGGGCTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQAQSWS*TGAHCG
Trigger: ACCACAATGAGCCCCGGTCCAGCTCCAGGATTGGGC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCCTTCACCTGCTTACTaGATGTTGTCACCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSPSPAY*MLSPLG
Trigger: CCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCCTTCACCTGCTTACTaGATGTTGTCACCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTPSPAY*MLSPLG
Trigger: CCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGCCCTCCTGGAGATTTaGTTTGCACAGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSALLEI*FAQRGE
Trigger: CTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCGTAGCGACTGCCACTaGGCCGGACAGACATGGGCG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFRSDCH*AGQTWA
Trigger: CGCCCATGTCTGTCCGGCCCAGTGGCAGTCGCTACG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCGGTGAGTGTTTCATCTaGTCAGGAGAAAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTGECFI*SGESRF
Trigger: AAAACGACTTTCTCCTGATCAGATGAAACACTCACC...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTGGAGCTGTGGGATTTaGAAAGGGAGGATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATWSCGI*KGRIAL
Trigger: AAGAGCTATCCTCCCTTTTCAAATCCCACAGCTCCA...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGTAGAGTTGGCTGAGTaGAGAGACCCGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSVELAE*RDPLLL
Trigger: CAGCAACAACGGGTCTCTTCACTCAGCCAACTCTAC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGTAGAGTTGGCTGAGTaGAGAGACCCGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTVELAE*RDPLLL
Trigger: CAGCAACAACGGGTCTCTTCACTCAGCCAACTCTAC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGACACACAGCGGGGCTaGAACTGGTTTCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFDTQRG*NWFPLG
Trigger: CCCCAGCGGAAACCAGTTTCAGCCCCGCTGTGTGTC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAAGGCAGAACAGAGCTaGGGAAAGCCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSKAEQS*GKPLGS
Trigger: AGAACCCAGTGGCTTTCCTCAGCTCTGTTCTGCCTT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGAGTGGCCAGAACAGCTaGTTCTCCCCTGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSGQNS*FSPGGW
Trigger: CCAACCCCCAGGGGAGAATCAGCTGTTCTGGCCACT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCAAGTCCTTTACTGGTaGGAGATCCGTAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTQVLYW*EIRSDC
Trigger: GCAGTCGCTACGGATCTCTCACCAGTAAAGGACTTG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCTCTGCTGGGGCAAGTaGCAAAAACAACACTCTCCC +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTLCWGK*QKQHSP
Trigger: GGGAGAGTGTTGTTTTTGTCACTTGCCCCAGCAGAG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCTCTGCTGGGGCAAGTaGCAAAAACAACACTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSLCWGK*QKQHSP
Trigger: GGGAGAGTGTTGTTTTTGTCACTTGCCCCAGCAGAG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGGTTGGGCCACCAAATaGTGGGCTTGGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQGWATK*WAWGTA
Trigger: AGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTCAGGCAGGTTGAAGTaGACACGAAGCCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSGRLK*TRSPIL
Trigger: CAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTAGGGGCCACAGTTGCTaGGGTGGTGTTCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFRGHSC*GGVRGG
Trigger: CCCTCCACGAACACCACCGCAGCAACTGTGGCCCCT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGCACTTATAGGTCCCTaGGTCGCGCTGAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPALIGP*VALSEW
Trigger: CCACTCACTCAGCGCGACGCAGGGACCTATAAGTGC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGAAGGACTGCCGAAATaGCAAGGGTTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPEGLPK*QGLEEG
Trigger: GCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTTKCWA*GTAGGM
Trigger: CATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGT...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCCTGCAAGTAATTGGTaGGGCTCTGACACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTPASNW*GSDTAG
Trigger: TCCAGCAGTGTCAGAGCCCCACCAATTACTTGCAGG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGGGTGGGGAGGGCTGTaGCTCAATAGCTGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQGWGGL*LNSCQV
Trigger: AACCTGGCAGCTATTGAGCCACAGCCCTCCCCACCC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCCGCTGGGGGAGCATTaGAGTTCAAAACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSPLGEH*SSKQSC
Trigger: GCATGACTGTTTTGAACTCCAATGCTCCCCCAGCGG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACCACAGTTGCTGCGGTaGTGTTCGTGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQPQLLR*CSWRGR
Trigger: TCTTCCCCTCCACGAACACCACCGCAGCAACTGTGG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGGGAGTGGCTCATTTTaGATGGAAAGCCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSGSGSF*MESPPG
Trigger: TCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTGGTTCTGTTGGGCCTaGTGGGAGTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSWFCWA*WEWLIL
Trigger: CAAAATGAGCCACTCCCACCAGGCCCAACAGAACCA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAAGGAGAGACAGGAATTaGGGACACACAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQRRDRN*GHTAGL
Trigger: CAGCCCCGCTGTGTGTCCCCAATTCCTGTCTCTCCT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCAGCTGATTCTCCCCTaGGGGTTGGCTGCCATGATG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPQLILP*GLAAMM
Trigger: CATCATGGCAGCCAACCCCCAGGGGAGAATCAGCTG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGGGCAGTGTTTGGACTaGTGTGTGGGTGGCATATTC +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTGQCLD*CVGGIF
Trigger: GAATATGCCACCCACACACCAGTCCAAACACTGCCC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTGTTCTGTCGCGCAGCTaGACTGTAGTGTCACGATCT +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISAVLSRS*TVVSRS
Trigger: AGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCAGTACCACCTTACTTaGGGTGGTGGAATTCCTACC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSQYHLT*GGGIPT
Trigger: GGTAGGAATTCCACCACCTCAAGTAAGGTGGTACTG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTCGGCCGGGCCAAGCTaGACGTCTGTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFSAGPS*TSVMKE
Trigger: CTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAAAAGCCACTGGGTTCTaGATCCGGCTGGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQKATGF*IRLVGE
Trigger: CTCTCCTACCAGCCGGATTCAGAACCCAGTGGCTTT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGGACTCCGGTCTCCCTaGCCAGCATCTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAGLRSP*PASCGR
Trigger: CCTCCCACAAGATGCTGGTCAGGGAGACCGGAGTCC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGTCCCTGCGTCGCGCTaGGTGAGTGGGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAVPASR*VSGSMS
Trigger: GCTCATTGACCCACTCACTCAGCGCGACGCAGGGAC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGATTTCTTGGCTGGCTaGATGAGAAGGCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSDFLAG*MRRQAY
Trigger: GTATGCCTGCCTTCTCATTCAGCCAGCCAAGAAATC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCATTGATGGCCAGTCTTaGCAAATTGACACTTTCGTC +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSIDGQS*QIDTFV
Trigger: GACGAAAGTGTCAATTTGGCAAGACTGGCCATCAAT...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCTGGGCTTGGGGTACTaGTGGAGGAATGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPLGLGY*WRNDCR
Trigger: TCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCGTGCAGCTGTGCAATaGTTGACACTGTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTRAAVQ*LTLCRI
Trigger: AATACGGCACAGTGTCAAGCATTGCACAGCTGCACG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGAAGGAGCCTTCACCTaGTTACTGGATGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSEGAFT*LLDVVT
Trigger: GGTGACAACATCCAGTAAGCAGGTGAAGGCTCCTTC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCAGGGGCCACAGTTGCTaGGGTGGTGTTCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRGHSC*GGVRGG
Trigger: CCCTCCACGAACACCACCGCAGCAACTGTGGCCCCT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGAAGGGGCCACAGTTaGTGCGGTGGTGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGRGHS*CGGVRG
Trigger: TCCACGAACACCACCGCAGCAACTGTGGCCCCTTCC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCCTGTTGTGTCCTGGTaGATACTGATCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTPVVSW*ILILSL
Trigger: CAGAGAGAGGATCAGTATGCACCAGGACACAACAGG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCTCGTCTAATTCTTCTTaGCTCAGAAAGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTSSNSS*LRKAER
Trigger: TCTTTCAGCCTTTCTGAGCCAAGAAGAATTAGACGA...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACACCAGCCGCCTCACTaGCAGCCTGCTCCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLHQPPH*QPAPLH
Trigger: GTGAAGCGGAGCAGGCTGCCAGTGAGGCGGCTGGTG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGGCTTGGGGTACTGCTaGAGGAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPGLGYC*RNDCRG
Trigger: ACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCGGGCCTGGTCTGTCTaGTGGTCACCACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRAWSV*WSPHQP
Trigger: AGGCTGGTGTGGTGACCACCAGACAGACCAGGCCCG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGGTTTGGCCAGAACTaGAGGGGGCTCTTTCACGGG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGFGQN*RGLFHG
Trigger: CCCGTGAAAGAGCCCCCTCCAGTTCTGGCCAAACCC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACCTTCACCTGCTTACTaGATGTTGTCACCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQPSPAY*MLSPLG
Trigger: CCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCCACAGTTGCTGCGGTaGTGTTCGTGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQPQLLR*CSWRGR
Trigger: TCTTCCCCTCCACGAACACCACCGCAGCAACTGTGG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTGGTGTTGGTTCTGTTaGGCCTGGTGGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQWCWFC*AWWEWL
Trigger: GAGCCACTCCCACCAGGCCCAACAGAACCAACACCA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGCTGAGGAAAGCCACTaGGTTCTGAATCCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPAEESH*VLNPAG
Trigger: ACCAGCCGGATTCAGAACCCAGTGGCTTTCCTCAGC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTCTGGTAGCACAGGTTaGCCATTGAGTAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSGSTG*PLSSHV
Trigger: GACATGGCTACTCAATGGCCAACCTGTGCTACCAGA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTCTGGTAGCACAGGTTaGCCATTGAGTAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTSGSTG*PLSSHV
Trigger: GACATGGCTACTCAATGGCCAACCTGTGCTACCAGA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCAATGAGCAGAGAGTaGACTCCGGTCTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSMSRE*TPVSLT
Trigger: GGTCAGGGAGACCGGAGTCCACTCTCTGCTCATTGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCCAGTAGAACACAGGTaGGGGCATGCCTATCACGCG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQPVEHR*GHAYHA
Trigger: CGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGACAGACATGGGCGGTaGGATCTGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQDRHGR*DLMVPL
Trigger: CAGTGGCACCATCAGATCCCACCGCCCATGTCTGTC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGCCGTCCATAGAGAGTaGGGAGTTAACCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSAVHRE*GVNLSF
Trigger: GAAACTAAGGTTAACTCCTCACTCTCTATGGACGGC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000613327.4
CDS-3UTR TCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTGCCGTCCATAGAGAGTaGGGAGTTAACCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISAAVHRE*GVNLSF
Trigger: GAAACTAAGGTTAACTCCTCACTCTCTATGGACGGC...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCCTCTCTCTTAGAAGCTaGGATATGGAAGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATLSLRS*DMEVEA
Trigger: AGCTTCTACTTCCATATCTCAGCTTCTAAGAGAGAG...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTTGGCTCAGAAAGGCTaGAAGATCTGGAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTLAQKG*KIWKVI
Trigger: GATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCAA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCCAAAGGGTCGTAATTaGTGGCCAGTCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSPKGRN*WPVLPN
Trigger: ATTTGGCAAGACTGGCCATCAATTACGACCCTTTGG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCAGGATAGCTCTTCAATaGAGTCGGCAGCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATRIALQ*SRQPYL
Trigger: TAAATAAGGCTGCCGACTTCATTGAAGAGCTATCCT...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTGGAGCTGTGGGATTTaGAAAGGGAGGATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSWSCGI*KGRIAL
Trigger: AAGAGCTATCCTCCCTTTTCAAATCCCACAGCTCCA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATTCCGCAATGGTCAGTaGGTGCAGATTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQFRNGQ*VQISCL
Trigger: CAGGCAGGAAATCTGCACTCACTGACCATTGCGGAA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSKTTS*PSEADK
Trigger: TTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTGCTTGCAGTACATGTaGAGCACCCAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTCLQYM*STQNLL
Trigger: CAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGTAGAGTTGGCTGAGTaGAGAGACCCGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQVELAE*RDPLLL
Trigger: CAGCAACAACGGGTCTCTTCACTCAGCCAACTCTAC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGGTGGTAGAGTTGGCTaGGTGAAGAGACCCGTTGTT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPGGRVG*VKRPVV
Trigger: AACAACGGGTCTCTTCACTCAGCCAACTCTACCACC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCACAGATGGAGGCTCTaGGTGGGGTGGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLHRWRL*VGWGGL
Trigger: CAGCCCTCCCCACCCCACTCAGAGCCTCCATCTGTG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTTGTTGCCTGTCCGTTaGACCTCTCCTGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSLLPVR*TSPGKN
Trigger: ATTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGAAAGCCACTGGGTTCTaGATCCGGCTGGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQKATGF*IRLVGE
Trigger: CTCTCCTACCAGCCGGATTCAGAACCCAGTGGCTTT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGGGGTTGGCTGCCATaGTGGTGTAGTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGGWLP*WCSCHR
Trigger: ACGATGGCAACTACACCATCATGGCAGCCAACCCCC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCAGTGGCCAGAACAGCTaGTTCTCCCCTGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSGQNS*FSPGGW
Trigger: CCAACCCCCAGGGGAGAATCAGCTGTTCTGGCCACT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACAGAGGCGCCCCTCATaGGCTACCATATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAQRRPS*ATISPG
Trigger: TCCTGGGGATATGGTAGCTCATGAGGGGCGCCTCTG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACAAGTCCTTTACTGGTaGGAGATCCGTAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQQVLYW*EIRSDC
Trigger: GCAGTCGCTACGGATCTCTCACCAGTAAAGGACTTG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACTCTGCTGGGGCAAGTaGCAAAAACAACACTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQLCWGK*QKQHSP
Trigger: GGGAGAGTGTTGTTTTTGTCACTTGCCCCAGCAGAG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAGAGTGCAACTTACTTaGGGTGGTGGAATTCCTACC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSRVQLT*GGGIPT
Trigger: GGTAGGAATTCCACCACCTCAAGTAAGTTGCACTCT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCGGCCCCAGAAGGACTaGCGAAATGGCAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRPQKD*RNGKGW
Trigger: CCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCTGGGCTTGGGGTACTaGTGGAGGAATGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQLGLGY*WRNDCR
Trigger: TCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTCAGGCAGGTTGAAGTaGACACGAAGCCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSGRLK*TRSPIL
Trigger: CAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTCTGTGACCCGGAAGTaGTTGAGTCTCTTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTSVTRK*LSLLSK
Trigger: CTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCAGAGGTTAGCCGACTaGGAATGGGCAAACTTTGTA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSQRLAD*EWANFV
Trigger: TACAAAGTTTGCCCATTCGCAGTCGGCTAACCTCTG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGCACTTATAGGTCCCTaGGTCGCGCTGAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFALIGP*VALSEW
Trigger: CCACTCACTCAGCGCGACGCAGGGACCTATAAGTGC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTTATAGGTCCCTaGGTCGCGCTGAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKALIGP*VALSEW
Trigger: CCACTCACTCAGCGCGACGCAGGGACCTATAAGTGC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGAGATCCGTAGCGACTaGCACTGGGCCGGACAGACA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSEIRSD*HWAGQT
Trigger: TGTCTGTCCGGCCCAGTGGCAGTCGCTACGGATCTC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCAGACGTGCGCCACTATaGCTGGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSRRAPL*LANFYI
Trigger: AATATAAAAATTAGCCAGGCATAGTGGCGCACGTCT...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATCTGGAAGGTCATCTTaGCCTCCGCCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKSGRSS*PPPPSA
Trigger: CGCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTTCTGGAAGGTCATCTTaGCCTCCGCCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSSGRSS*PPPPSA
Trigger: CGCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGA...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGGCCTTTTTGCCTCCTaGGGGCTTTCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQGLFAS*GLSLEL
Trigger: CAGCTCTAAAGAAAGCCCCCAGGAGGCAAAAAGGCC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCAAAGGCTTCCGCAATaGTCAGTGAGTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISAQRLPQ*SVSADF
Trigger: GAAATCTGCACTCACTGACCATTGCGGAAGCCTTTG...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPTKCWA*GTAGGM
Trigger: CATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATGGGCCACCAAATGCTaGGCTTGGGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKWATKC*AWGTAG
Trigger: TCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGTTGCCACACGAGGTTaGGCCACCAAATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKVATRG*ATKCWA
Trigger: AGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAAC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTGTTGCCACACGAGGTTaGGCCACCAAATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSVATRG*ATKCWA
Trigger: AGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAAC...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCTGCAAGTAATTGGTaGGGCTCTGACACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPPASNW*GSDTAG
Trigger: TCCAGCAGTGTCAGAGCCCCACCAATTACTTGCAGG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGGTGCAAATCTCCTCTaGCTCTGCCATGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQGANLL*LCHGSR
Trigger: CCTCGATCCATGGCAGAGCCAGAGGAGATTTGCACC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGACCGGGGCTCATTGTaGTTCACCAGAACCCCCTCG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISADRGSL*FTRTPS
Trigger: CGAGGGGGTTCTGGTGAACCACAATGAGCCCCGGTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGGGTTTGGCCAGAACTaGAGGGGGCTCTTTCACGGG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAGFGQN*RGLFHG
Trigger: CCCGTGAAAGAGCCCCCTCCAGTTCTGGCCAAACCC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATGGGCCTGGTGGGAGTaGCTCATTTTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQWAWWE*LILDGK
Trigger: CTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGTCTCTTGTCAAAGATaGGAGCAATACACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSVSCQR*EQYTCP
Trigger: CGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGAC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGCAGGTGAATGTAACTaGAGAGCCTTCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQAGECN*RAFCDP
Trigger: CGGGTCACAGAAGGCTCTCCAGTTACATTCACCTGC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTCAATGAGCAGAGAGTaGACTCCGGTCTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSMSRE*TPVSLT
Trigger: GGTCAGGGAGACCGGAGTCCACTCTCTGCTCATTGA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATCCAGTCTCACGGGGTaGCCTTCGGGAACACCGCAG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLSSLTG*PSGTPQ
Trigger: CTGCGGTGTTCCCGAAGGCCACCCCGTGAGACTGGA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTACCCTGTTGTGTCCTaGTGCATACTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTYPVVS*CILILS
Trigger: AGAGAGGATCAGTATGCACCAGGACACAACAGGGTA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACGTATATATCCAGCCTaGCAGTGCACGACACGATGC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQRIYPA*QCTTRC
Trigger: GCATCGTGTCGTGCACTGCCAGGCTGGATATATACG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR CAA 72 bp GTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTaGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCC +
Preference number: 4 (lower is better)
Translates to: VQQCGNLLNFGC*ETTKSGLFSFP
Trigger: GGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAGTCGTTTTCTAGCTTaGGTTTCATCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSRFLA*VSSAFS
Trigger: GGAGAAGGCAGATGAAACTCAAGCTAGAAAACGACT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGGTAGTGGGAGGAGATaGCACCTCATTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQGSGRR*HLIWLL
Trigger: CAGAAGCCAAATGAGGTGTCATCTCCTCCCACTACC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGAGACCCGTTGTTGCTaGGGTCCTCATTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQETRCC*GPHFLS
Trigger: TGAGAGGAAATGAGGACCTCAGCAACAACGGGTCTC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCATCTTCAGGCAGGTTaGAGTGCACACGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQHLQAG*SAHEAQ
Trigger: TTGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAAACTCCTTAGGAGATaGAGGAGGTGGGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSKLLRR*RRWVLQ
Trigger: TTGCAAAACCCACCTCCTTCATCTCCTAAGGAGTTT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGAGTGCTGCTCAAAGTaGACACCGGAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFECCSK*TPESWK
Trigger: CTTCCAGCTCTCCGGTGTTCACTTTGAGCAGCACTC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGGGGGTTGGCTGCCATaGTGGTGTAGTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAGGWLP*WCSCHR
Trigger: ACGATGGCAACTACACCATCATGGCAGCCAACCCCC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGATTTCTTGGCTGGCTaGATGAGAAGGCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPDFLAG*MRRQAY
Trigger: GTATGCCTGCCTTCTCATTCAGCCAGCCAAGAAATC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGATTTCTTGGCTGGCTaGATGAGAAGGCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQDFLAG*MRRQAY
Trigger: GTATGCCTGCCTTCTCATTCAGCCAGCCAAGAAATC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCATCCAGGCACTCCACTaGAATGATAATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTIQALH*NDNYPG
Trigger: CCCTGGATAATTATCATTGCAGTGGAGTGCCTGGAT...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCTGGGCTTGGGGTACTaGTGGAGGAATGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFLGLGY*WRNDCR
Trigger: TCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAACACTGCTGGATGGTTaGCACACGAGGTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISATLLDG*HTRLGH
Trigger: GTGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCACACTGCTGGATGGTTaGCACACGAGGTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSTLLDG*HTRLGH
Trigger: GTGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCAATGCTTGACACTGTaGCGTATTTGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSQCLTL*RICCLQ
Trigger: CTGCAAGCAACAAATACGGCACAGTGTCAAGCATTG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACTGTGGCTCAATAGCTaGCAGGTTGGTGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQLWLNS*QVGGRV
Trigger: AACTCTACCACCAACCTGGCAGCTATTGAGCCACAG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCTCTGGGGTTTTTGTTaGCTGTCCGTTGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPLWGFC*LSVEPL
Trigger: GAGAGGTTCAACGGACAGGCAACAAAAACCCCAGAG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACCCCTGGGGGTTGGCTaGCATGATGGTGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLPLGVG*HDGVVA
Trigger: GGCAACTACACCATCATGGCAGCCAACCCCCAGGGG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTATATCCCCAGGAGCCTaGAGGAAATGTGGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPISPGA*RKCGRK
Trigger: TTTCCGACCACATTTCCTGCAGGCTCCTGGGGATAT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGCACTTATAGGTCCCTaGGTCGCGCTGAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSALIGP*VALSEW
Trigger: CCACTCACTCAGCGCGACGCAGGGACCTATAAGTGC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCTGTTGTGTCCTGGTaGATACTGATCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPPVVSW*ILILSL
Trigger: CAGAGAGAGGATCAGTATGCACCAGGACACAACAGG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACGAAATGGCAAGGGTTaGAGGAGGGCTCCGCTCGAC +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLRNGKG*RRAPLD
Trigger: GTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGAAGGACTGCCGAAATaGCAAGGGTTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAEGLPK*QGLEEG
Trigger: GCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCTTCGAGGGTTATCCTaGCAGAAGTTAGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISALRGLS*QKLGSK
Trigger: TTTTGAGCCTAACTTCTGCCAGGATAACCCTCGAAG...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCGACGATGTGAATATCTaGGGAATTTTCAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATDDVNI*GIFKLL
Trigger: AAGGAGCTTGAAAATTCCCCAGATATTCACATCGTC...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTGGCTTGGGGTACTGCTaGAGGAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSGLGYC*RNDCRG
Trigger: ACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCC...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQTKCWA*GTAGGM
Trigger: CATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGTTGCCACACGAGGTTaGGCCACCAAATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSVATRG*ATKCWA
Trigger: AGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAAC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTTCTGACACTGCTGGATaGTTGCCACACGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSSDTAG*LPHEVG
Trigger: CCCAACCTCGTGTGGCAACCATCCAGCAGTGTCAGA...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACCGTTGAACCTCTCCTaGAAAGAATCGGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKPLNLS*KESGLV
Trigger: GACCAGGCCCGATTCTTTCCAGGAGAGGTTCAACGG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGGGGAAGAAGGCTCTaGGGTTTTTGTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGGRRL*GFCCLS
Trigger: GGACAGGCAACAAAAACCCCAGAGCCTTCTTCCCCC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGGGGAAGAAGGCTCTaGGGTTTTTGTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGGRRL*GFCCLS
Trigger: GGACAGGCAACAAAAACCCCAGAGCCTTCTTCCCCC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCTGCGGTGGTGTTCGTaGAGGGGAAGAAATACTTCG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQLRWCS*RGRNTS
Trigger: CGAAGTATTTCTTCCCCTCCACGAACACCACCGCAG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGCTGAGGAAAGCCACTaGGTTCTGAATCCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFAEESH*VLNPAG
Trigger: ACCAGCCGGATTCAGAACCCAGTGGCTTTCCTCAGC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCTGAGGAAAGCCACTaGGTTCTGAATCCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKAEESH*VLNPAG
Trigger: ACCAGCCGGATTCAGAACCCAGTGGCTTTCCTCAGC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCATTTGTGGGTGGGATaGCAGGGAGAGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQHLWVG*QGEKAE
Trigger: TTCTGCCTTCTCTCCCTGCCATCCCACCCACAAATG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTGGGATGGCATGGATaGTGCACTTCTAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLGWHG*CTSRQP
Trigger: GGGCTGCCTAGAAGTGCACCATCCATGCCATCCCAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGCAGGTGAATGTAACTaGAGAGCCTTCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQAGECN*RAFCDP
Trigger: CGGGTCACAGAAGGCTCTCCAGTTACATTCACCTGC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCAGCTGATTCTCCCCTaGGGGTTGGCTGCCATGATG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSQLILP*GLAAMM
Trigger: CATCATGGCAGCCAACCCCCAGGGGAGAATCAGCTG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAAGCCTGCAGGAAATGTaGTCGGAAAAAGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSLQEM*SEKAFL
Trigger: CAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTAGCCTGCAGGAAATGTaGTCGGAAAAAGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSLQEM*SEKAFL
Trigger: CAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCTGACCAGCATCTTGTaGGAGGCATCTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQLTSIL*EASGST
Trigger: TGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTCAATGAGCAGAGAGTaGACTCCGGTCTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFSMSRE*TPVSLT
Trigger: GGTCAGGGAGACCGGAGTCCACTCTCTGCTCATTGA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTCCAGTCTCACGGGGTaGCCTTCGGGAACACCGCAG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLSSLTG*PSGTPQ
Trigger: CTGCGGTGTTCCCGAAGGCCACCCCGTGAGACTGGA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACCAGTAGAACACAGGTaGGGGCATGCCTATCACGCG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAPVEHR*GHAYHA
Trigger: CGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCGTATATATCCAGCCTaGCAGTGCACGACACGATGC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQRIYPA*QCTTRC
Trigger: GCATCGTGTCGTGCACTGCCAGGCTGGATATATACG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGACAGACATGGGCGGTaGGATCTGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSDRHGR*DLMVPL
Trigger: CAGTGGCACCATCAGATCCCACCGCCCATGTCTGTC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTACAGGTCCAGCAGTGTaGGAACTTACTCAACTTCGG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPTGPAV*ELTQLR
Trigger: CCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGGTAAGGCCATGCTTTaGCCACAAAATAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTGKAML*PQNKCT
Trigger: AGTGCACTTATTTTGTGGCCAAAGCATGGCCTTACC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGTTTGGACTGGTGTGTaGGTGGCATATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQVWTGV*VAYSCR
Trigger: TCTGCAGGAATATGCCACCCACACACCAGTCCAAAC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCCAGCTGAGTGTGCTTaGCACAGACAGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSPAECA*HRQHQG
Trigger: TCCCTGGTGCTGTCTGTGCCAAGCACACTCAGCTGG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCCAGATCTGCTCATTTaGCTAGCTAGCAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSPDLLI*LASKHF
Trigger: GAAATGCTTGCTAGCTAGCCAAATGAGCAGATCTGG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCTCTCTCTTAGAAGCTaGGATATGGAAGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTLSLRS*DMEVEA
Trigger: AGCTTCTACTTCCATATCTCAGCTTCTAAGAGAGAG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATTGGCTCAGAAAGGCTaGAAGATCTGGAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQLAQKG*KIWKVI
Trigger: GATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCAA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACCAAAGGGTCGTAATTaGTGGCCAGTCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQPKGRN*WPVLPN
Trigger: ATTTGGCAAGACTGGCCATCAATTACGACCCTTTGG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTTCATAGTACAGAGATaGAGGGGAAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPFIVQR*RGRPWC
Trigger: ACACCAGGGTCTTCCCCTTCATCTCTGTACTATGAA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACTGCTCCGTAACTTTTaGGTGAACCGGGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISALLRNF*VNRGGC
Trigger: GCAACCTCCCCGGTTCACTCAAAAGTTACGGAGCAG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGTTAGGGTCGCCTTCTaGGTCAGAAGAAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKVRVAF*VRRRNP
Trigger: GGGGTTTCTTCTTCTGACTCAGAAGGCGACCCTAAC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTGGTAGTGGGAGGAGATaGCACCTCATTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSGSGRR*HLIWLL
Trigger: CAGAAGCCAAATGAGGTGTCATCTCCTCCCACTACC...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSKTTS*PSEADK
Trigger: TTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSKTTS*PSEADK
Trigger: TTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACAGCTGTGCAATGCTTaGCACTGTGCCGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQQLCNA*HCAVFV
Trigger: AACAAATACGGCACAGTGTCAAGCATTGCACAGCTG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGTGGTAGAGTTGGCTaGGTGAAGAGACCCGTTGTT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGGRVG*VKRPVV
Trigger: AACAACGGGTCTCTTCACTCAGCCAACTCTACCACC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTTGTTGCCTGTCCGTTaGACCTCTCCTGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPLLPVR*TSPGKN
Trigger: ATTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGAGTGCTGCTCAAAGTaGACACCGGAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAECCSK*TPESWK
Trigger: CTTCCAGCTCTCCGGTGTTCACTTTGAGCAGCACTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTAAGGCAGAACAGAGCTaGGGAAAGCCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFKAEQS*GKPLGS
Trigger: AGAACCCAGTGGCTTTCCTCAGCTCTGTTCTGCCTT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAAAGGCAGAACAGAGCTaGGGAAAGCCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKKAEQS*GKPLGS
Trigger: AGAACCCAGTGGCTTTCCTCAGCTCTGTTCTGCCTT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGACTCCGGTCTCCCTaGCCAGCATCTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGLRSP*PASCGR
Trigger: CCTCCCACAAGATGCTGGTCAGGGAGACCGGAGTCC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGATTTCTTGGCTGGCTaGATGAGAAGGCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQDFLAG*MRRQAY
Trigger: GTATGCCTGCCTTCTCATTCAGCCAGCCAAGAAATC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTGGAAGCTGATTTGGTaGATTCACCAAAACTACTGC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSWKLIW*IHQNYC
Trigger: GCAGTAGTTTTGGTGAATTCACCAAATCAGCTTCCA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGTGAGTTGTATGGCATaGCCTCCTAATGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPVSCMA*PPNAKW
Trigger: CCACTTAGCATTAGGAGGTCATGCCATACAACTCAC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGTTTGCCCGCATACGTaGGTTGTATGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKVCPHT*VVWHDL
Trigger: GAGGTCATGCCATACAACTCACGTATGCGGGCAAAC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGTTTGCCCGCATACGTaGGTTGTATGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFVCPHT*VVWHDL
Trigger: GAGGTCATGCCATACAACTCACGTATGCGGGCAAAC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTAAATACAATGCCAGCTaGGTGTGCTTGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPKYNAS*VCLAQT
Trigger: TGTCTGTGCCAAGCACACTCAGCTGGCATTGTATTT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCATCCTTGCCTTGAAGTaGAGACAGTTTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTILALK*RQFQAF
Trigger: AAAGGCTTGAAACTGTCTTCACTTCAAGGCAAGGAT...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTGGAAATCCTTGCCTTaGAGTGAAGACAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSWKSLP*SEDSFK
Trigger: CTTGAAACTGTCTTCACTTCAAGGCAAGGATTTCCA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGAGTACCACATTGGGATaGTCCACAGGAATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSTTLG*STGMPR
Trigger: CCTTGGCATTCCTGTGGATCATCCCAATGTGGTACT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354393.6
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGCCTCACTGGCAGCCTaGTCCGCTTCACGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVASLAA*SASRLL
Trigger: CAAGAGGCGTGAAGCGGAGCAGGCTGCCAGTGAGGC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGCCGTATTTGTTGCTTaGAGTACATGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQAVFVA*STCEAP
Trigger: GGGTGCTTCACATGTACTGCAAGCAACAAATACGGC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTCATTTCCTCTCACGTaGAGCTGTGCAATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSFPLT*SCAMLD
Trigger: GTCAAGCATTGCACAGCTGCACGTGAGAGGAAATGA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCATTTCCTCTCACGTaGAGCTGTGCAATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSFPLT*SCAMLD
Trigger: GTCAAGCATTGCACAGCTGCACGTGAGAGGAAATGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTAGGGGCCACAGTTGCTaGGGTGGTGTTCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSRGHSC*GGVRGG
Trigger: CCCTCCACGAACACCACCGCAGCAACTGTGGCCCCT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGGAAGGGGCCACAGTTaGTGCGGTGGTGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLGRGHS*CGGVRG
Trigger: TCCACGAACACCACCGCAGCAACTGTGGCCCCTTCC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTGGGAGCAATACACTTaGCCGTGGGGATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQWEQYT*PWGSHH
Trigger: ATGATGAGATCCCCACGGGCAAGTGTATTGCTCCCA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCCCCTGGGGGTTGGCTaGCATGATGGTGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLPLGVG*HDGVVA
Trigger: GGCAACTACACCATCATGGCAGCCAACCCCCAGGGG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCTCCAGGATCACAGGTaGTTTCTTCACCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQLQDHR*FLHLFG
Trigger: GCCAAAGAGGTGAAGAAAGCACCTGTGATCCTGGAG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAATGGCTGTAAGAAGCTaGACAACCTGTCACCACCGG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKMAVRS*TTCHHR
Trigger: CCGGTGGTGACAGGTTGTCCAGCTTCTTACAGCCAT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000613327.4
CDS-3UTR CCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTATCCTTTTGGAGCTGTaGGATTTGAAAAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISAILLEL*DLKRED
Trigger: ATCCTCCCTTTTCAAATCCCACAGCTCCAAAAGGAT...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCATCCTTTTGGAGCTGTaGGATTTGAAAAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSILLEL*DLKRED
Trigger: ATCCTCCCTTTTCAAATCCCACAGCTCCAAAAGGAT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCAAAGGCTTCCGCAATaGTCAGTGAGTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPQRLPQ*SVSADF
Trigger: GAAATCTGCACTCACTGACCATTGCGGAAGCCTTTG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTACCTCATTTGGCTTCTaGATTCGATTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISATSFGF*IRFISS
Trigger: GGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATCTGACACTGCTGGATaGTTGCCACACGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISASDTAG*LPHEVG
Trigger: CCCAACCTCGTGTGGCAACCATCCAGCAGTGTCAGA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCCTCGAGTTTGGGTTTaGGGGGTTGTTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFPRVWV*GVVPQM
Trigger: CATCTGTGGAACAACCCCCCAAACCCAAACTCGAGG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCGGGCCTGGTCTGTCTaGTGGTCACCACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVRAWSV*WSPHQP
Trigger: AGGCTGGTGTGGTGACCACCAGACAGACCAGGCCCG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACGGGCCTGGTCTGTCTaGTGGTCACCACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTRAWSV*WSPHQP
Trigger: AGGCTGGTGTGGTGACCACCAGACAGACCAGGCCCG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGAGTGGAATCAAGTTTaGGTTTGGCCAGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQEWNQV*VWPELE
Trigger: CTCCAGTTCTGGCCAAACCCAAACTTGATTCCACTC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGCTGTTGTAACTGAGTaGAATCAAGTTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSAVVTE*NQVWVW
Trigger: CCAAACCCAAACTTGATTCCACTCAGTTACAACAGC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCCGCTGGGGGAGCATTaGAGTTCAAAACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFPLGEH*SSKQSC
Trigger: GCATGACTGTTTTGAACTCCAATGCTCCCCCAGCGG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGATGTTGTCACCGCTaGGGGAGCATTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGCCHR*GSIGVQ
Trigger: TTGAACTCCAATGCTCCCCCAGCGGTGACAACATCC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACTGCGGTGGTGTTCGTaGAGGGGAAGAAATACTTCG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKLRWCS*RGRNTS
Trigger: CGAAGTATTTCTTCCCCTCCACGAACACCACCGCAG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGGAGTGGCTCATTTTaGATGGAAAGCCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGSGSF*MESPPG
Trigger: TCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTTCTGTTGGGCCTGGTaGGAGTGGCTCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQFCWAW*EWLILD
Trigger: ATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATGGTTCTGTTGGGCCTaGTGGGAGTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKWFCWA*WEWLIL
Trigger: CAAAATGAGCCACTCCCACCAGGCCCAACAGAACCA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAAAATGTGAATGGTGGTaGTGTTGGTTCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQKCEWW*CWFCWA
Trigger: GGCCCAACAGAACCAACACCACCACCATTCACATTT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGATGGAAAATGTGAATaGTGGTGGTGTTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTDGKCE*WWCWFC
Trigger: ACAGAACCAACACCACCACCATTCACATTTTCCATC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAAGGAGAGACAGGAATTaGGGACACACAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLRRDRN*GHTAGL
Trigger: CAGCCCCGCTGTGTGTCCCCAATTCCTGTCTCTCCT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACATTTGTGGGTGGGATaGCAGGGAGAGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKHLWVG*QGEKAE
Trigger: TTCTGCCTTCTCTCCCTGCCATCCCACCCACAAATG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGAGCCTGCAGGAAATGTaGTCGGAAAAAGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSLQEM*SEKAFL
Trigger: CAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCTGACCAGCATCTTGTaGGAGGCATCTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFLTSIL*EASGST
Trigger: TGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACTGACCAGCATCTTGTaGGAGGCATCTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKLTSIL*EASGST
Trigger: TGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATCCAGTCTCACGGGGTaGCCTTCGGGAACACCGCAG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTSSLTG*PSGTPQ
Trigger: CTGCGGTGTTCCCGAAGGCCACCCCGTGAGACTGGA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATTTCACGCACAAGGATaGCTTGCCAGATCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQFHAQG*LARSAH
Trigger: ATGAGCAGATCTGGCAAGCCATCCTTGTGCGTGAAA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR TCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCCAGTCTTGCCAAATTaGCACTTTCGTCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISAPVLPN*HFRLIL
Trigger: AAGAATTAGACGAAAGTGTCAATTTGGCAAGACTGG...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTGCTGTTCCAGGGCGTaGTTCACTTCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFCCSRA*FTSLSL
Trigger: CAGGGATAATGAAGTGAATCACGCCCTGGAACAGCA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGTTAGGGTCGCCTTCTaGGTCAGAAGAAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAVRVAF*VRRRNP
Trigger: GGGGTTTCTTCTTCTGACTCAGAAGGCGACCCTAAC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSKTTS*PSEADK
Trigger: TTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGTAGAGTTGGCTGAGTaGAGAGACCCGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAVELAE*RDPLLL
Trigger: CAGCAACAACGGGTCTCTTCACTCAGCCAACTCTAC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTCGGCCGGGCCAAGCTaGACGTCTGTGATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVSAGPS*TSVMKE
Trigger: CTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTAGTGGCCAGAACAGCTaGTTCTCCCCTGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSSGQNS*FSPGGW
Trigger: CCAACCCCCAGGGGAGAATCAGCTGTTCTGGCCACT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCAGAGGCGCCCCTCATaGGCTACCATATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVQRRPS*ATISPG
Trigger: TCCTGGGGATATGGTAGCTCATGAGGGGCGCCTCTG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGACTCCGGTCTCCCTaGCCAGCATCTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGLRSP*PASCGR
Trigger: CCTCCCACAAGATGCTGGTCAGGGAGACCGGAGTCC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACAAGTCCTTTACTGGTaGGAGATCCGTAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAQVLYW*EIRSDC
Trigger: GCAGTCGCTACGGATCTCTCACCAGTAAAGGACTTG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTCTGCTGGGGCAAGTaGCAAAAACAACACTCTCCC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLCWGK*QKQHSP
Trigger: GGGAGAGTGTTGTTTTTGTCACTTGCCCCAGCAGAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTAATTTTCAAGCTCCTTaGCTTCACAGTACCACCTTA +
Preference number: 4 (lower is better)
Translates to: ETDSCSVAQLDCSVTISANFQAP*LHSTTL
Trigger: TAAGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATT...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGCACCCAGAATCTTCTaGAAACACCTCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQAPRIF*KHLSND
Trigger: GTCATTGCTGAGGTGTTTGCAGAAGATTCTGGGTGC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCGTGCAGCTGTGCAATaGTTGACACTGTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFRAAVQ*LTLCRI
Trigger: AATACGGCACAGTGTCAAGCATTGCACAGCTGCACG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTACCAGCCTCGGAGGATaGTTCACTTCCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFTSLGG*FTSFVI
Trigger: GATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACTCTGGGGTTTTTGTTaGCTGTCCGTTGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKLWGFC*LSVEPL
Trigger: GAGAGGTTCAACGGACAGGCAACAAAAACCCCAGAG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAGGGGCCACAGTTGCTaGGGTGGTGTTCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLERGHSC*GGVRGG
Trigger: CCCTCCACGAACACCACCGCAGCAACTGTGGCCCCT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCAAGTCTCGAATCACTaGGTTCTTAGTTTCACGAAT +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSQVSNH*VLSFTN
Trigger: ATTCGTGAAACTAAGAACGCAGTGATTCGAGACTTG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCCAAGTCTCGAATCACTaGGTTCTTAGTTTCACGAAT +
Preference number: 4 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTQVSNH*VLSFTN
Trigger: ATTCGTGAAACTAAGAACGCAGTGATTCGAGACTTG...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCCCTGGGGGTTGGCTaGCATGATGGTGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPLGVG*HDGVVA
Trigger: GGCAACTACACCATCATGGCAGCCAACCCCCAGGGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTACACAGGTGGGGGCATaGCTATCACGCGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVTQVGA*LSRGTP
Trigger: TGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGAGATCCGTAGCGACTaGCACTGGGCCGGACAGACA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSEIRSD*HWAGQT
Trigger: TGTCTGTCCGGCCCAGTGGCAGTCGCTACGGATCTC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGATTCAAAGCACTCTTTaGCACAGGTCCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQIQSTL*HRSSSV
Trigger: CACACTGCTGGACCTGTGGCAAAGAGTGCTTTGAAT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAGTACACCCAGGATATaGAAATCAAAAGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSTPRI*KSKVFA
Trigger: GGCAAACACTTTTGATTTGCATATCCTGGGTGTACT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTGGCCACAAAATAAGTaGACTGTGCAATATCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSWPQNK*TVQYQV
Trigger: CACTTGATATTGCACAGTGCACTTATTTTGTGGCCA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCGCACAAGGATGGCTTaGCAGATCTGCTCATTTGGC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRTRMA*QICSFG
Trigger: GCCAAATGAGCAGATCTGGCAAGCCATCCTTGTGCG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGGCCTTTTTGCCTCCTaGGGGCTTTCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSGLFAS*GLSLEL
Trigger: CAGCTCTAAAGAAAGCCCCCAGGAGGCAAAAAGGCC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACACCAGCCGCCTCACTaGCAGCCTGCTCCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTHQPPH*QPAPLH
Trigger: GTGAAGCGGAGCAGGCTGCCAGTGAGGCGGCTGGTG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGGCTTGGGGTACTGCTaGAGGAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLGLGYC*RNDCRG
Trigger: ACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGTTGCCACACGAGGTTaGGCCACCAAATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLVATRG*ATKCWA
Trigger: AGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAAC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATCTGACACTGCTGGATaGTTGCCACACGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLSDTAG*LPHEVG
Trigger: CCCAACCTCGTGTGGCAACCATCCAGCAGTGTCAGA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCTCAACCTTAGGAGATaGAGCTCCTTTTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPLNLRR*SSFYSA
Trigger: TGCAGAGTAAAAGGAGCTCCATCTCCTAAGGTTGAG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCCTCGAGTTTGGGTTTaGGGGGTTGTTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSPRVWV*GVVPQM
Trigger: CATCTGTGGAACAACCCCCCAAACCCAAACTCGAGG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGACCGGGGCTCATTGTaGTTCACCAGAACCCCCTCG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVDRGSL*FTRTPS
Trigger: CGAGGGGGTTCTGGTGAACCACAATGAGCCCCGGTC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGACCGGGGCTCATTGTaGTTCACCAGAACCCCCTCG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSDRGSL*FTRTPS
Trigger: CGAGGGGGTTCTGGTGAACCACAATGAGCCCCGGTC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGCCCAATCCTGGAGCTaGACCGGGGCTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTAQSWS*TGAHCG
Trigger: ACCACAATGAGCCCCGGTCCAGCTCCAGGATTGGGC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACGGGCCTGGTCTGTCTaGTGGTCACCACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLERAWSV*WSPHQP
Trigger: AGGCTGGTGTGGTGACCACCAGACAGACCAGGCCCG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGATGGAAAGCCCTCCTaGAGATTTGGTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQDGKPS*RFGLHR
Trigger: TCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATGGGCCTGGTGGGAGTaGCTCATTTTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAWAWWE*LILDGK
Trigger: CTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTTCTGTTGGGCCTGGTaGGAGTGGCTCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFFCWAW*EWLILD
Trigger: ATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATTCTGTTGGGCCTGGTaGGAGTGGCTCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKFCWAW*EWLILD
Trigger: ATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTGGTTCTGTTGGGCCTaGTGGGAGTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSWFCWA*WEWLIL
Trigger: CAAAATGAGCCACTCCCACCAGGCCCAACAGAACCA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGGAAAATGTGAATGGTaGTGGTGTTGGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPGKCEW*WCWFCW
Trigger: CCAACAGAACCAACACCACCACCATTCACATTTTCC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACATTTGTGGGTGGGATaGCAGGGAGAGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAHLWVG*QGEKAE
Trigger: TTCTGCCTTCTCTCCCTGCCATCCCACCCACAAATG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACAATACACTTGCCCGTaGGGATCTCATCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQQYTCP*GSHHVE
Trigger: TTCAACATGATGAGATCCCCACGGGCAAGTGTATTG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGTCTCTTGTCAAAGATaGGAGCAATACACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQVSCQR*EQYTCP
Trigger: CGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGAC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACTTTCTTCACCTCTTTaGCTACTACAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQLSSPL*LLQRAP
Trigger: TGGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTACCCTGTTGTGTCCTaGTGCATACTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQYPVVS*CILILS
Trigger: AGAGAGGATCAGTATGCACCAGGACACAACAGGGTA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGACAGACATGGGCGGTaGGATCTGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLDRHGR*DLMVPL
Trigger: CAGTGGCACCATCAGATCCCACCGCCCATGTCTGTC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAACAGGTCCAGCAGTGTaGGAACTTACTCAACTTCGG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKTGPAV*ELTQLR
Trigger: CCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGGTAAGGCCATGCTTTaGCCACAAAATAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQGKAML*PQNKCT
Trigger: AGTGCACTTATTTTGTGGCCAAAGCATGGCCTTACC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGGGCAGTGTTTGGACTaGTGTGTGGGTGGCATATTC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSGQCLD*CVGGIF
Trigger: GAATATGCCACCCACACACCAGTCCAAACACTGCCC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGGGCAGTGTTTGGACTaGTGTGTGGGTGGCATATTC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAGQCLD*CVGGIF
Trigger: GAATATGCCACCCACACACCAGTCCAAACACTGCCC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCCGTCCATAGAGAGTaGGGAGTTAACCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKAVHRE*GVNLSF
Trigger: GAAACTAAGGTTAACTCCTCACTCTCTATGGACGGC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000613327.4
CDS-3UTR TCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTTTGGCTCAGAAAGGCTaGAAGATCTGGAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSLAQKG*KIWKVI
Trigger: GATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCAA...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTTGGCTCAGAAAGGCTaGAAGATCTGGAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFLAQKG*KIWKVI
Trigger: GATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCAA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATTCATAGTACAGAGATaGAGGGGAAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKFIVQR*RGRPWC
Trigger: ACACCAGGGTCTTCCCCTTCATCTCTGTACTATGAA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACCTGCCTGGACGATGTaGATATCTGGGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKPAWTM*ISGEFS
Trigger: TGAAAATTCCCCAGATATTCACATCGTCCAGGCAGG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTGCTTGCAGTACATGTaGAGCACCCAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFCLQYM*STQNLL
Trigger: CAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGACACACAGCGGGGCTaGAACTGGTTTCCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTDTQRG*NWFPLG
Trigger: CCCCAGCGGAAACCAGTTTCAGCCCCGCTGTGTGTC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCAAAGCCACTGGGTTCTaGATCCGGCTGGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLKATGF*IRLVGE
Trigger: CTCTCCTACCAGCCGGATTCAGAACCCAGTGGCTTT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTTGAATTTCATCATCTaGTTCATCAACAGGAGTACG +
Preference number: 4 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSLNFII*FINRST
Trigger: CGTACTCCTGTTGATGAATCAGATGATGAAATTCAA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGTCCCTGCGTCGCGCTaGGTGAGTGGGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTVPASR*VSGSMS
Trigger: GCTCATTGACCCACTCACTCAGCGCGACGCAGGGAC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACAAGTCCTTTACTGGTaGGAGATCCGTAGCGACTGC +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLQVLYW*EIRSDC
Trigger: GCAGTCGCTACGGATCTCTCACCAGTAAAGGACTTG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTACTCCGAGAAGAGCATaGATACACCATCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFTPRRA*IHHRAF
Trigger: GAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGTGAGTTGTATGGCATaGCCTCCTAATGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFVSCMA*PPNAKW
Trigger: CCACTTAGCATTAGGAGGTCATGCCATACAACTCAC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGCCTCACTGGCAGCCTaGTCCGCTTCACGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTASLAA*SASRLL
Trigger: CAAGAGGCGTGAAGCGGAGCAGGCTGCCAGTGAGGC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGAATTCCTACCACTATaGAATCCAACTGTACTCGAG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQEFLPL*NPTVLE
Trigger: CTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGGTTGGGCCACCAAATaGTGGGCTTGGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTGWATK*WAWGTA
Trigger: AGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTACACTGCTGGATGGTTaGCACACGAGGTTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVTLLDG*HTRLGH
Trigger: GTGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCCGTATTTGTTGCTTaGAGTACATGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKAVFVA*STCEAP
Trigger: GGGTGCTTCACATGTACTGCAAGCAACAAATACGGC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCGTGCAGCTGTGCAATaGTTGACACTGTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRAAVQ*LTLCRI
Trigger: AATACGGCACAGTGTCAAGCATTGCACAGCTGCACG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCACCAGCCTCGGAGGATaGTTCACTTCCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSTSLGG*FTSFVI
Trigger: GATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTCTGGGGTTTTTGTTaGCTGTCCGTTGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLWGFC*LSVEPL
Trigger: GAGAGGTTCAACGGACAGGCAACAAAAACCCCAGAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTGGGAGCAATACACTTaGCCGTGGGGATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSWEQYT*PWGSHH
Trigger: ATGATGAGATCCCCACGGGCAAGTGTATTGCTCCCA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATGGGAGCAATACACTTaGCCGTGGGGATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAWEQYT*PWGSHH
Trigger: ATGATGAGATCCCCACGGGCAAGTGTATTGCTCCCA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCAGAGGTTAGCCGACTaGGAATGGGCAAACTTTGTA +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFQRLAD*EWANFV
Trigger: TACAAAGTTTGCCCATTCGCAGTCGGCTAACCTCTG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAATATCCCCAGGAGCCTaGAGGAAATGTGGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAISPGA*RKCGRK
Trigger: TTTCCGACCACATTTCCTGCAGGCTCCTGGGGATAT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACTCCAGGATCACAGGTaGTTTCTTCACCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISALQDHR*FLHLFG
Trigger: GCCAAAGAGGTGAAGAAAGCACCTGTGATCCTGGAG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAACACAGGTGGGGGCATaGCTATCACGCGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLETQVGA*LSRGTP
Trigger: TGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAATTCAAAGCACTCTTTaGCACAGGTCCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKIQSTL*HRSSSV
Trigger: CACACTGCTGGACCTGTGGCAAAGAGTGCTTTGAAT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATCTGGAAGGTCATCTTaGCCTCCGCCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTSGRSS*PPPPSA
Trigger: CGCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCTTCGAGGGTTATCCTaGCAGAAGTTAGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQLRGLS*QKLGSK
Trigger: TTTTGAGCCTAACTTCTGCCAGGATAACCCTCGAAG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAATCCTTTTGGAGCTGTaGGATTTGAAAAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQILLEL*DLKRED
Trigger: ATCCTCCCTTTTCAAATCCCACAGCTCCAAAAGGAT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTACCTCATTTGGCTTCTaGATTCGATTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPTSFGF*IRFISS
Trigger: GGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTCTGACACTGCTGGATaGTTGCCACACGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLSDTAG*LPHEVG
Trigger: CCCAACCTCGTGTGGCAACCATCCAGCAGTGTCAGA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGGAAAGAATCGGGCCTaGTCTGTCTGGTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLGKNRA*SVWWSP
Trigger: TGGTGACCACCAGACAGACCAGGCCCGATTCTTTCC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGGTTTGGCCAGAACTaGAGGGGGCTCTTTCACGGG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGFGQN*RGLFHG
Trigger: CCCGTGAAAGAGCCCCCTCCAGTTCTGGCCAAACCC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAAATCAAGTTTGGGTTTaGCCAGAACTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISANQVWV*PELEGA
Trigger: AGCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGGATGTTGTCACCGCTaGGGGAGCATTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLGCCHR*GSIGVQ
Trigger: TTGAACTCCAATGCTCCCCCAGCGGTGACAACATCC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCCACAGTTGCTGCGGTaGTGTTCGTGGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSPQLLR*CSWRGR
Trigger: TCTTCCCCTCCACGAACACCACCGCAGCAACTGTGG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGCCCTCCTGGAGATTTaGTTTGCACAGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLALLEI*FAQRGE
Trigger: CTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGATGGAAAGCCCTCCTaGAGATTTGGTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKDGKPS*RFGLHR
Trigger: TCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATGGTGTTGGTTCTGTTaGGCCTGGTGGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTWCWFC*AWWEWL
Trigger: GAGCCACTCCCACCAGGCCCAACAGAACCAACACCA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGGAAAATGTGAATGGTaGTGGTGTTGGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQGKCEW*WCWFCW
Trigger: CCAACAGAACCAACACCACCACCATTCACATTTTCC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTAGGAGAGACAGGAATTaGGGACACACAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSRRDRN*GHTAGL
Trigger: CAGCCCCGCTGTGTGTCCCCAATTCCTGTCTCTCCT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTAGGAGAGACAGGAATTaGGGACACACAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVRRDRN*GHTAGL
Trigger: CAGCCCCGCTGTGTGTCCCCAATTCCTGTCTCTCCT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTGGGATGGCATGGATaGTGCACTTCTAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLGWHG*CTSRQP
Trigger: GGGCTGCCTAGAAGTGCACCATCCATGCCATCCCAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACTGGGATGGCATGGATaGTGCACTTCTAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTLGWHG*CTSRQP
Trigger: GGGCTGCCTAGAAGTGCACCATCCATGCCATCCCAG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGTCTCTTGTCAAAGATaGGAGCAATACACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKVSCQR*EQYTCP
Trigger: CGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGAC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACAGCTGATTCTCCCCTaGGGGTTGGCTGCCATGATG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTQLILP*GLAAMM
Trigger: CATCATGGCAGCCAACCCCCAGGGGAGAATCAGCTG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAAGCCTGCAGGAAATGTaGTCGGAAAAAGCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISASLQEM*SEKAFL
Trigger: CAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCCAGTAGAACACAGGTaGGGGCATGCCTATCACGCG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVPVEHR*GHAYHA
Trigger: CGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGACAGACATGGGCGGTaGGATCTGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTDRHGR*DLMVPL
Trigger: CAGTGGCACCATCAGATCCCACCGCCCATGTCTGTC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCATCGTGCTTTCCATaGAGGAAAAGGCAGAAAATA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPPSCFP*RKRQKI
Trigger: TATTTTCTGCCTTTTCCTCCATGGAAAGCACGATGG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACCATCGTGCTTTCCATaGAGGAAAAGGCAGAAAATA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQPSCFP*RKRQKI
Trigger: TATTTTCTGCCTTTTCCTCCATGGAAAGCACGATGG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAACAGGTCCAGCAGTGTaGGAACTTACTCAACTTCGG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISATGPAV*ELTQLR
Trigger: CCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTCCCAAAGCAGTGGATaGCAACTGTGTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSQSSG*QLCDIF
Trigger: AAAGATGTCACACAGTTGCCATCCACTGCTTTGGGA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTCAGCCCAGGCATATaGCTCCTAATTGCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLSPGI*LLIAPS
Trigger: ACTAGGAGCAATTAGGAGCCATATGCCTGGGCTGAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGACTGGTGTGTGGGTaGCATATTCCTGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGLVCG*HIPAEY
Trigger: ATATTCTGCAGGAATATGCCACCCACACACCAGTCC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCAGCTGAGTGTGCTTaGCACAGACAGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPAECA*HRQHQG
Trigger: TCCCTGGTGCTGTCTGTGCCAAGCACACTCAGCTGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGAGGATAGCTCTTCAATaGAGTCGGCAGCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQRIALQ*SRQPYL
Trigger: TAAATAAGGCTGCCGACTTCATTGAAGAGCTATCCT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATGCTGTTCCAGGGCGTaGTTCACTTCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLCCSRA*FTSLSL
Trigger: CAGGGATAATGAAGTGAATCACGCCCTGGAACAGCA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTGCTCCGTAACTTTTaGGTGAACCGGGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLLRNF*VNRGGC
Trigger: GCAACCTCCCCGGTTCACTCAAAAGTTACGGAGCAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCCTGCCTGGACGATGTaGATATCTGGGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSPAWTM*ISGEFS
Trigger: TGAAAATTCCCCAGATATTCACATCGTCCAGGCAGG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTTCCGCAATGGTCAGTaGGTGCAGATTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLFRNGQ*VQISCL
Trigger: CAGGCAGGAAATCTGCACTCACTGACCATTGCGGAA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGTTAGGGTCGCCTTCTaGGTCAGAAGAAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLVRVAF*VRRRNP
Trigger: GGGGTTTCTTCTTCTGACTCAGAAGGCGACCCTAAC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGAGACCCGTTGTTGCTaGGGTCCTCATTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLETRCC*GPHFLS
Trigger: TGAGAGGAAATGAGGACCTCAGCAACAACGGGTCTC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCATCTTCAGGCAGGTTaGAGTGCACACGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLHLQAG*SAHEAQ
Trigger: TTGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATTGTTGCCTGTCCGTTaGACCTCTCCTGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISALLPVR*TSPGKN
Trigger: ATTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGAGTGCTGCTCAAAGTaGACACCGGAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSECCSK*TPESWK
Trigger: CTTCCAGCTCTCCGGTGTTCACTTTGAGCAGCACTC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGGGGTTGGCTGCCATaGTGGTGTAGTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGGWLP*WCSCHR
Trigger: ACGATGGCAACTACACCATCATGGCAGCCAACCCCC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTATACATGTAATCGATaGAAGGTGATGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPYTCNR*KVMVTC
Trigger: ACAGGTCACCATCACCTTTCATCGATTACATGTATA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAA +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPMLSGS*FGEFTK
Trigger: TTTGGTGAATTCACCAAATCAGCTTCCACTTAGCAT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGTGAGTTGTATGGCATaGCCTCCTAATGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAVSCMA*PPNAKW
Trigger: CCACTTAGCATTAGGAGGTCATGCCATACAACTCAC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGTTTGCCCGCATACGTaGGTTGTATGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLVCPHT*VVWHDL
Trigger: GAGGTCATGCCATACAACTCACGTATGCGGGCAAAC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCAAATACAATGCCAGCTaGGTGTGCTTGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSKYNAS*VCLAQT
Trigger: TGTCTGTGCCAAGCACACTCAGCTGGCATTGTATTT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGATCCTTGCCTTGAAGTaGAGACAGTTTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQILALK*RQFQAF
Trigger: AAAGGCTTGAAACTGTCTTCACTTCAAGGCAAGGAT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCATACTGTGGCCTTTTTaGCTCCTGGGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSILWPF*LLGAFF
Trigger: AAAGAAAGCCCCCAGGAGGCAAAAAGGCCACAGTAT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAAATTTTCAAGCTCCTTaGCTTCACAGTACCACCTTA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQNFQAP*LHSTTL
Trigger: TAAGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTGCTGGAGGAATGACTaGAGAGGTAGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLCWRND*RGSGRR
Trigger: TCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGTTGGGCCACCAAATaGTGGGCTTGGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGWATK*WAWGTA
Trigger: AGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGCCGTATTTGTTGCTTaGAGTACATGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAAVFVA*STCEAP
Trigger: GGGTGCTTCACATGTACTGCAAGCAACAAATACGGC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACTGTGGCTCAATAGCTaGCAGGTTGGTGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLLWLNS*QVGGRV
Trigger: AACTCTACCACCAACCTGGCAGCTATTGAGCCACAG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGGAAGGGGCCACAGTTaGTGCGGTGGTGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTGRGHS*CGGVRG
Trigger: TCCACGAACACCACCGCAGCAACTGTGGCCCCTTCC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTCTGTGACCCGGAAGTaGTTGAGTCTCTTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSVTRK*LSLLSK
Trigger: CTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCAGAGGTTAGCCGACTaGGAATGGGCAAACTTTGTA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSQRLAD*EWANFV
Trigger: TACAAAGTTTGCCCATTCGCAGTCGGCTAACCTCTG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAATATCCCCAGGAGCCTaGAGGAAATGTGGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLISPGA*RKCGRK
Trigger: TTTCCGACCACATTTCCTGCAGGCTCCTGGGGATAT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTGGCCACAAAATAAGTaGACTGTGCAATATCAAGTG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPWPQNK*TVQYQV
Trigger: CACTTGATATTGCACAGTGCACTTATTTTGTGGCCA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTCTATGCTGTCGTCTTaGATGCTTTGGACATGTTTT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSMLSS*MLWTCF
Trigger: AAAACATGTCCAAAGCATGCAAGACGACAGCATAGA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCATGGCTGTAAGAAGCTaGACAACCTGTCACCACCGG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLMAVRS*TTCHHR
Trigger: CCGGTGGTGACAGGTTGTCCAGCTTCTTACAGCCAT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGAAGGACTGCCGAAATaGCAAGGGTTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEEGLPK*QGLEEG
Trigger: GCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATCTGGAAGGTCATCTTaGCCTCCGCCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLESGRSS*PPPPSA
Trigger: CGCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCGTCTAATTCTTCTTaGCTCAGAAAGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSSNSS*LRKAER
Trigger: TCTTTCAGCCTTTCTGAGCCAAGAAGAATTAGACGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTCCTTACTTGAGGTGGTaGAATTCCTACCACTATGCA +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSPYLRW*NSYHYA
Trigger: TGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGG...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGACGATGTGAATATCTaGGGAATTTTCAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQDDVNI*GIFKLL
Trigger: AAGGAGCTTGAAAATTCCCCAGATATTCACATCGTC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACAAAGGCTTCCGCAATaGTCAGTGAGTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAQRLPQ*SVSADF
Trigger: GAAATCTGCACTCACTGACCATTGCGGAAGCCTTTG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGCTTGGGGTACTGCTaGAGGAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGLGYC*RNDCRG
Trigger: ACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATGGGCCACCAAATGCTaGGCTTGGGGTACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEWATKC*AWGTAG
Trigger: TCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACTCAACCTTAGGAGATaGAGCTCCTTTTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKLNLRR*SSFYSA
Trigger: TGCAGAGTAAAAGGAGCTCCATCTCCTAAGGTTGAG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTCTCAACCTTAGGAGATaGAGCTCCTTTTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSLNLRR*SSFYSA
Trigger: TGCAGAGTAAAAGGAGCTCCATCTCCTAAGGTTGAG...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGTGCAAATCTCCTCTaGCTCTGCCATGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGANLL*LCHGSR
Trigger: CCTCGATCCATGGCAGAGCCAGAGGAGATTTGCACC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGGTGCAAATCTCCTCTaGCTCTGCCATGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTGANLL*LCHGSR
Trigger: CCTCGATCCATGGCAGAGCCAGAGGAGATTTGCACC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGTGCAAATCTCCTCTaGCTCTGCCATGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGANLL*LCHGSR
Trigger: CCTCGATCCATGGCAGAGCCAGAGGAGATTTGCACC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGCCCAATCCTGGAGCTaGACCGGGGCTCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTAQSWS*TGAHCG
Trigger: ACCACAATGAGCCCCGGTCCAGCTCCAGGATTGGGC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGAAAGAATCGGGCCTaGTCTGTCTGGTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGKNRA*SVWWSP
Trigger: TGGTGACCACCAGACAGACCAGGCCCGATTCTTTCC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGGAAAGAATCGGGCCTaGTCTGTCTGGTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTGKNRA*SVWWSP
Trigger: TGGTGACCACCAGACAGACCAGGCCCGATTCTTTCC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGAAAGAATCGGGCCTaGTCTGTCTGGTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGKNRA*SVWWSP
Trigger: TGGTGACCACCAGACAGACCAGGCCCGATTCTTTCC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCGTTGAACCTCTCCTaGAAAGAATCGGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPLNLS*KESGLV
Trigger: GACCAGGCCCGATTCTTTCCAGGAGAGGTTCAACGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACCGTTGAACCTCTCCTaGAAAGAATCGGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTPLNLS*KESGLV
Trigger: GACCAGGCCCGATTCTTTCCAGGAGAGGTTCAACGG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCCGTTGAACCTCTCCTaGAAAGAATCGGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVPLNLS*KESGLV
Trigger: GACCAGGCCCGATTCTTTCCAGGAGAGGTTCAACGG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGAGTGGAATCAAGTTTaGGTTTGGCCAGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAEWNQV*VWPELE
Trigger: CTCCAGTTCTGGCCAAACCCAAACTTGATTCCACTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGCTGTTGTAACTGAGTaGAATCAAGTTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQAVVTE*NQVWVW
Trigger: CCAAACCCAAACTTGATTCCACTCAGTTACAACAGC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCCGCTGGGGGAGCATTaGAGTTCAAAACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLPLGEH*SSKQSC
Trigger: GCATGACTGTTTTGAACTCCAATGCTCCCCCAGCGG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCCTTCACCTGCTTACTaGATGTTGTCACCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSPSPAY*MLSPLG
Trigger: CCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGCCCTCCTGGAGATTTaGTTTGCACAGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSALLEI*FAQRGE
Trigger: CTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTGGGCCTGGTGGGAGTaGCTCATTTTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLWAWWE*LILDGK
Trigger: CTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTGGTTCTGTTGGGCCTaGTGGGAGTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLWFCWA*WEWLIL
Trigger: CAAAATGAGCCACTCCCACCAGGCCCAACAGAACCA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGAAAATGTGAATGGTaGTGGTGTTGGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGKCEW*WCWFCW
Trigger: CCAACAGAACCAACACCACCACCATTCACATTTTCC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGATGGAAAATGTGAATaGTGGTGGTGTTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQDGKCE*WWCWFC
Trigger: ACAGAACCAACACCACCACCATTCACATTTTCCATC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGCTGAGGAAAGCCACTaGGTTCTGAATCCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTAEESH*VLNPAG
Trigger: ACCAGCCGGATTCAGAACCCAGTGGCTTTCCTCAGC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATTCTTCGCTAATCCCTaGGATGGCATGGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLFFANP*DGMDGA
Trigger: TGCACCATCCATGCCATCCCAGGGATTAGCGAAGAA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCAATACACTTGCCCGTaGGGATCTCATCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFQYTCP*GSHHVE
Trigger: TTCAACATGATGAGATCCCCACGGGCAAGTGTATTG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCTTTGTACCATCAAGTaGCCAGAACAGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFLCTIK*PEQLIL
Trigger: GAGAATCAGCTGTTCTGGCCACTTGATGGTACAAAG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTACCCTGTTGTGTCCTaGTGCATACTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSYPVVS*CILILS
Trigger: AGAGAGGATCAGTATGCACCAGGACACAACAGGGTA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCGTATATATCCAGCCTaGCAGTGCACGACACGATGC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLRIYPA*QCTTRC
Trigger: GCATCGTGTCGTGCACTGCCAGGCTGGATATATACG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACCAGCTGAGTGTGCTTaGCACAGACAGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEPAECA*HRQHQG
Trigger: TCCCTGGTGCTGTCTGTGCCAAGCACACTCAGCTGG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTAATCTGGAAGTTCTATaGCAGAGGAAGTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPNLEVL*QRKSSL
Trigger: AAGTGAAGACTTCCTCTGCCATAGAACTTCCAGATT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354393.6
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAAGTCGTTTTCTAGCTTaGGTTTCATCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISASRFLA*VSSAFS
Trigger: GGAGAAGGCAGATGAAACTCAAGCTAGAAAACGACT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCAGTCGTTTTCTAGCTTaGGTTTCATCTGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSRFLA*VSSAFS
Trigger: GGAGAAGGCAGATGAAACTCAAGCTAGAAAACGACT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGTGAGTGTTTCATCTaGTCAGGAGAAAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGECFI*SGESRF
Trigger: AAAACGACTTTCTCCTGATCAGATGAAACACTCACC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATGGAGCTGTGGGATTTaGAAAGGGAGGATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLWSCGI*KGRIAL
Trigger: AAGAGCTATCCTCCCTTTTCAAATCCCACAGCTCCA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTGCTGTTCCAGGGCGTaGTTCACTTCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLCCSRA*FTSLSL
Trigger: CAGGGATAATGAAGTGAATCACGCCCTGGAACAGCA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTCCGCAATGGTCAGTaGGTGCAGATTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTFRNGQ*VQISCL
Trigger: CAGGCAGGAAATCTGCACTCACTGACCATTGCGGAA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGTTAGGGTCGCCTTCTaGGTCAGAAGAAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTVRVAF*VRRRNP
Trigger: GGGGTTTCTTCTTCTGACTCAGAAGGCGACCCTAAC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGTAGTGGGAGGAGATaGCACCTCATTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGSGRR*HLIWLL
Trigger: CAGAAGCCAAATGAGGTGTCATCTCCTCCCACTACC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGTAGTGGGAGGAGATaGCACCTCATTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGSGRR*HLIWLL
Trigger: CAGAAGCCAAATGAGGTGTCATCTCCTCCCACTACC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACAGCTGTGCAATGCTTaGCACTGTGCCGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLQLCNA*HCAVFV
Trigger: AACAAATACGGCACAGTGTCAAGCATTGCACAGCTG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGAGACCCGTTGTTGCTaGGGTCCTCATTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVETRCC*GPHFLS
Trigger: TGAGAGGAAATGAGGACCTCAGCAACAACGGGTCTC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGTGGTAGAGTTGGCTaGGTGAAGAGACCCGTTGTT +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGGRVG*VKRPVV
Trigger: AACAACGGGTCTCTTCACTCAGCCAACTCTACCACC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCATCTTCAGGCAGGTTaGAGTGCACACGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSHLQAG*SAHEAQ
Trigger: TTGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATTGTTGCCTGTCCGTTaGACCTCTCCTGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLLLPVR*TSPGKN
Trigger: ATTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCAAACTCCTTAGGAGATaGAGGAGGTGGGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSKLLRR*RRWVLQ
Trigger: TTGCAAAACCCACCTCCTTCATCTCCTAAGGAGTTT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAAAACTCCTTAGGAGATaGAGGAGGTGGGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAKLLRR*RRWVLQ
Trigger: TTGCAAAACCCACCTCCTTCATCTCCTAAGGAGTTT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAAAGGCAGAACAGAGCTaGGGAAAGCCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTKAEQS*GKPLGS
Trigger: AGAACCCAGTGGCTTTCCTCAGCTCTGTTCTGCCTT...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTTGAATTTCATCATCTaGTTCATCAACAGGAGTACG +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPLNFII*FINRST
Trigger: CGTACTCCTGTTGATGAATCAGATGATGAAATTCAA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATTGAATTTCATCATCTaGTTCATCAACAGGAGTACG +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQLNFII*FINRST
Trigger: CGTACTCCTGTTGATGAATCAGATGATGAAATTCAA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTATACATGTAATCGATaGAAGGTGATGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQYTCNR*KVMVTC
Trigger: ACAGGTCACCATCACCTTTCATCGATTACATGTATA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATGGAAGCTGATTTGGTaGATTCACCAAAACTACTGC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKWKLIW*IHQNYC
Trigger: GCAGTAGTTTTGGTGAATTCACCAAATCAGCTTCCA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGTTTGCCCGCATACGTaGGTTGTATGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTVCPHT*VVWHDL
Trigger: GAGGTCATGCCATACAACTCACGTATGCGGGCAAAC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCAGAGGATTTCTTTCTaGTTGGTTTATTACCAATCC +
Preference number: 4 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPQRISF*LVYYQS
Trigger: GGATTGGTAATAAACCAATCAGAAAGAAATCCTCTG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACAGAGGATTTCTTTCTaGTTGGTTTATTACCAATCC +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQQRISF*LVYYQS
Trigger: GGATTGGTAATAAACCAATCAGAAAGAAATCCTCTG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTGAATTCCTACCACTATaGAATCCAACTGTACTCGAG +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSEFLPL*NPTVLE
Trigger: CTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTC...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTGCTGGAGGAATGACTaGAGAGGTAGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVCWRND*RGSGRR
Trigger: TCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATGCTGGAGGAATGACTaGAGAGGTAGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTCWRND*RGSGRR
Trigger: TCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCGTGCAGCTGTGCAATaGTTGACACTGTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLRAAVQ*LTLCRI
Trigger: AATACGGCACAGTGTCAAGCATTGCACAGCTGCACG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTCAGGCAGGTTGAAGTaGACACGAAGCCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSSGRLK*TRSPIL
Trigger: CAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACCAGCCTCGGAGGATaGTTCACTTCCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLTSLGG*FTSFVI
Trigger: GATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTCCAGGATCACAGGTaGTTTCTTCACCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLQDHR*FLHLFG
Trigger: GCCAAAGAGGTGAAGAAAGCACCTGTGATCCTGGAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCCTGTTGTGTCCTGGTaGATACTGATCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLPVVSW*ILILSL
Trigger: CAGAGAGAGGATCAGTATGCACCAGGACACAACAGG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTTACTCAACTTCGGTTaGTTGGAAACCACCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFLLNFG*LETTKS
Trigger: AGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATTACTCAACTTCGGTTaGTTGGAAACCACCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKLLNFG*LETTKS
Trigger: AGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGTAA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAATTCAAAGCACTCTTTaGCACAGGTCCAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLIQSTL*HRSSSV
Trigger: CACACTGCTGGACCTGTGGCAAAGAGTGCTTTGAAT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAAAGCTGGTAAGGCCATaGTTTGGCCACAAAATAAGT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKKLVRP*FGHKIS
Trigger: ACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATGTTTCCCCGATGTCTaGTTTCAGCTAAATAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKCFPDV*FQLNSS
Trigger: AGAGCTATTTAGCTGAAACCAGACATCGGGGAAACA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTTGTTTCCCCGATGTCTaGTTTCAGCTAAATAGCTCT +
Preference number: 4 (lower is better)
Translates to: GVSFCHVGQAGLELLISSCFPDV*FQLNSS
Trigger: AGAGCTATTTAGCTGAAACCAGACATCGGGGAAACA...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGCCTTTTTGCCTCCTaGGGGCTTTCTTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGLFAS*GLSLEL
Trigger: CAGCTCTAAAGAAAGCCCCCAGGAGGCAAAAAGGCC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCTGCAAGTAATTGGTaGGGCTCTGACACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPASNW*GSDTAG
Trigger: TCCAGCAGTGTCAGAGCCCCACCAATTACTTGCAGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCCTGCAAGTAATTGGTaGGGCTCTGACACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVPASNW*GSDTAG
Trigger: TCCAGCAGTGTCAGAGCCCCACCAATTACTTGCAGG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTCAACCTTAGGAGATaGAGCTCCTTTTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLNLRR*SSFYSA
Trigger: TGCAGAGTAAAAGGAGCTCCATCTCCTAAGGTTGAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGGGGAAGAAGGCTCTaGGGTTTTTGTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGGRRL*GFCCLS
Trigger: GGACAGGCAACAAAAACCCCAGAGCCTTCTTCCCCC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGTGGGTTTTGCAATTaGTGTTGTTCCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFGGFCN*CCSSKT
Trigger: AGTCTTACTGGAACAACACCAATTGCAAAACCCACC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCGCTGGGGGAGCATTaGAGTTCAAAACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPLGEH*SSKQSC
Trigger: GCATGACTGTTTTGAACTCCAATGCTCCCCCAGCGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGATGTTGTCACCGCTaGGGGAGCATTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGCCHR*GSIGVQ
Trigger: TTGAACTCCAATGCTCCCCCAGCGGTGACAACATCC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTGCGGTGGTGTTCGTaGAGGGGAAGAAATACTTCG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLRWCS*RGRNTS
Trigger: CGAAGTATTTCTTCCCCTCCACGAACACCACCGCAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGCCCTCCTGGAGATTTaGTTTGCACAGAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEALLEI*FAQRGE
Trigger: CTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGGAGTGGCTCATTTTaGATGGAAAGCCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGSGSF*MESPPG
Trigger: TCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGGGAGTGGCTCATTTTaGATGGAAAGCCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSGSGSF*MESPPG
Trigger: TCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTGGGCCTGGTGGGAGTaGCTCATTTTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVWAWWE*LILDGK
Trigger: CTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATGGTGTTGGTTCTGTTaGGCCTGGTGGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTWCWFC*AWWEWL
Trigger: GAGCCACTCCCACCAGGCCCAACAGAACCAACACCA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAAAATGTGAATGGTGGTaGTGTTGGTTCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLKCEWW*CWFCWA
Trigger: GGCCCAACAGAACCAACACCACCACCATTCACATTT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGATGGAAAATGTGAATaGTGGTGGTGTTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKDGKCE*WWCWFC
Trigger: ACAGAACCAACACCACCACCATTCACATTTTCCATC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTTCTTCGCTAATCCCTaGGATGGCATGGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLFFANP*DGMDGA
Trigger: TGCACCATCCATGCCATCCCAGGGATTAGCGAAGAA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAATTTTGTACTCCTGCTaGTTTGGTCTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKILYSC*FGLTSL
Trigger: CAGTGATGTCAGACCAAACCAGCAGGAGTACAAAAT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGCAGGTGAATGTAACTaGAGAGCCTTCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVAGECN*RAFCDP
Trigger: CGGGTCACAGAAGGCTCTCCAGTTACATTCACCTGC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGCAGGTGAATGTAACTaGAGAGCCTTCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSAGECN*RAFCDP
Trigger: CGGGTCACAGAAGGCTCTCCAGTTACATTCACCTGC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATTAGCCGACTGCGAATaGGCAAACTTTGTACCATCA +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISALADCE*ANFVPS
Trigger: TGATGGTACAAAGTTTGCCCATTCGCAGTCGGCTAA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTTAGCCGACTGCGAATaGGCAAACTTTGTACCATCA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLADCE*ANFVPS
Trigger: TGATGGTACAAAGTTTGCCCATTCGCAGTCGGCTAA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTCTGGTAGCACAGGTTaGCCATTGAGTAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLSGSTG*PLSSHV
Trigger: GACATGGCTACTCAATGGCCAACCTGTGCTACCAGA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCTGACCAGCATCTTGTaGGAGGCATCTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVLTSIL*EASGST
Trigger: TGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACTCTGGTGCAAGGGATaGTCTCATTGTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLLWCKG*SHCLSS
Trigger: GGAAGAAAGACAATGAGACCATCCCTTGCACCAGAG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGGACTGGTGTGTGGGTaGCATATTCCTGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLGLVCG*HIPAEY
Trigger: ATATTCTGCAGGAATATGCCACCCACACACCAGTCC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGTTTGGACTGGTGTGTaGGTGGCATATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLVWTGV*VAYSCR
Trigger: TCTGCAGGAATATGCCACCCACACACCAGTCCAAAC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGAATGCCAAGGAATCTaGAAGTTCTATGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSECQGI*KFYGRG
Trigger: TCCTCTGCCATAGAACTTCCAGATTCCTTGGCATTC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354393.6
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCGTCTTGCATGCTTTaGACATGTTTTTCAACTCAT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSSCML*TCFSTH
Trigger: ATGAGTTGAAAAACATGTCCAAAGCATGCAAGACGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATTGTCCTTACTCAGATaGCCAGGATGGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTLSLLR*PGWPQQ
Trigger: CTGCTGAGGCCATCCTGGCCATCTGAGTAAGGACAA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCAGGATAGCTCTTCAATaGAGTCGGCAGCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRIALQ*SRQPYL
Trigger: TAAATAAGGCTGCCGACTTCATTGAAGAGCTATCCT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTTCATAGTACAGAGATaGAGGGGAAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLFIVQR*RGRPWC
Trigger: ACACCAGGGTCTTCCCCTTCATCTCTGTACTATGAA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCAGTACCACCTTACTTaGGGTGGTGGAATTCCTACC +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVQYHLT*GGGIPT
Trigger: GGTAGGAATTCCACCACCTCAAGTAAGGTGGTACTG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR TCA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTCATCATTCACTGGTTaGGGAGACTTTGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSSFTG*GDFVFF
Trigger: GAAAAATACAAAGTCTCCTCAACCAGTGAATGATGA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACTCCGAGAAGAGCATaGATACACCATCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLTPRRA*IHHRAF
Trigger: GAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATATACATGTAATCGATaGAAGGTGATGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKYTCNR*KVMVTC
Trigger: ACAGGTCACCATCACCTTTCATCGATTACATGTATA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTATACATGTAATCGATaGAAGGTGATGGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFYTCNR*KVMVTC
Trigger: ACAGGTCACCATCACCTTTCATCGATTACATGTATA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAA +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKMLSGS*FGEFTK
Trigger: TTTGGTGAATTCACCAAATCAGCTTCCACTTAGCAT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTATGCTAAGTGGAAGCTaGTTTGGTGAATTCACCAAA +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFMLSGS*FGEFTK
Trigger: TTTGGTGAATTCACCAAATCAGCTTCCACTTAGCAT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAATCCAGGCACTCCACTaGAATGATAATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLIQALH*NDNYPG
Trigger: CCCTGGATAATTATCATTGCAGTGGAGTGCCTGGAT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATCAGGCAGGTTGAAGTaGACACGAAGCCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLESGRLK*TRSPIL
Trigger: CAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTACCAGCCTCGGAGGATaGTTCACTTCCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVTSLGG*FTSFVI
Trigger: GATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACTCTGGGGTTTTTGTTaGCTGTCCGTTGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTLWGFC*LSVEPL
Trigger: GAGAGGTTCAACGGACAGGCAACAAAAACCCCAGAG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGAAGGAGCCTTCACCTaGTTACTGGATGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSEGAFT*LLDVVT
Trigger: GGTGACAACATCCAGTAAGCAGGTGAAGGCTCCTTC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATGGGAGCAATACACTTaGCCGTGGGGATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTWEQYT*PWGSHH
Trigger: ATGATGAGATCCCCACGGGCAAGTGTATTGCTCCCA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTCTGTGACCCGGAAGTaGTTGAGTCTCTTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLSVTRK*LSLLSK
Trigger: CTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTCCAGGATCACAGGTaGTTTCTTCACCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLQDHR*FLHLFG
Trigger: GCCAAAGAGGTGAAGAAAGCACCTGTGATCCTGGAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCTGTTGTGTCCTGGTaGATACTGATCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPVVSW*ILILSL
Trigger: CAGAGAGAGGATCAGTATGCACCAGGACACAACAGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAAGTACACCCAGGATATaGAAATCAAAAGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKSTPRI*KSKVFA
Trigger: GGCAAACACTTTTGATTTGCATATCCTGGGTGTACT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATATGCTGGAAATCCTTaGCTTGAAGTGAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKYAGNP*LEVKTV
Trigger: AACTGTCTTCACTTCAAGGCAAGGATTTCCAGCATA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTATGCTGGAAATCCTTaGCTTGAAGTGAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFYAGNP*LEVKTV
Trigger: AACTGTCTTCACTTCAAGGCAAGGATTTCCAGCATA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTAATTTTCAAGCTCCTTaGCTTCACAGTACCACATTG +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFNFQAP*LHSTTL
Trigger: CAATGTGGTACTGTGAAGGCAAGGAGCTTGAAAATT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354393.6
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACTCATGTTAACTCGGTaGTATCCTTCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLLMLTR*YPSSGS
Trigger: AGAGCCTGAAGAAGGATAGCACCGAGTTAACATGAG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR GCA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATCTTCATATACAGAGTaGAACTTACTTGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PTFLPQLRLQESLADLFKSSYTE*NLLEVV
Trigger: CACCACCTCAAGTAAGTTGCACTCTGTATATGAAGA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACTTCGAGGGTTATCCTaGCAGAAGTTAGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLLRGLS*QKLGSK
Trigger: TTTTGAGCCTAACTTCTGCCAGGATAACCCTCGAAG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCATCCTTTTGGAGCTGTaGGATTTGAAAAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSILLEL*DLKRED
Trigger: ATCCTCCCTTTTCAAATCCCACAGCTCCAAAAGGAT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACCTTACTTGAGGTGGTaGAATTCCTACCACTATGCA +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLPYLRW*NSYHYA
Trigger: TGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAACCTCATTTGGCTTCTaGATTCGATTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISATSFGF*IRFISS
Trigger: GGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLETKCWA*GTAGGM
Trigger: CATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACCTCGAGTTTGGGTTTaGGGGGTTGTTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEPRVWV*GVVPQM
Trigger: CATCTGTGGAACAACCCCCCAAACCCAAACTCGAGG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAAATCAAGTTTGGGTTTaGCCAGAACTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTNQVWV*PELEGA
Trigger: AGCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTAATCAAGTTTGGGTTTaGCCAGAACTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVNQVWV*PELEGA
Trigger: AGCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAAATCAAGTTTGGGTTTaGCCAGAACTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTNQVWV*PELEGA
Trigger: AGCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATT...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGCTGTTGTAACTGAGTaGAATCAAGTTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAAVVTE*NQVWVW
Trigger: CCAAACCCAAACTTGATTCCACTCAGTTACAACAGC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGATGTTGTCACCGCTaGGGGAGCATTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGCCHR*GSIGVQ
Trigger: TTGAACTCCAATGCTCCCCCAGCGGTGACAACATCC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGGAAAATGTGAATGGTaGTGGTGTTGGTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLGKCEW*WCWFCW
Trigger: CCAACAGAACCAACACCACCACCATTCACATTTTCC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACATTTGTGGGTGGGATaGCAGGGAGAGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEHLWVG*QGEKAE
Trigger: TTCTGCCTTCTCTCCCTGCCATCCCACCCACAAATG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTTCTTCGCTAATCCCTaGGATGGCATGGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSFFANP*DGMDGA
Trigger: TGCACCATCCATGCCATCCCAGGGATTAGCGAAGAA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGTTATCATCATTCACTaGTTGAGGAGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQVIIIH*LRRLCI
Trigger: AATACAAAGTCTCCTCAACCAGTGAATGATGATAAC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAATTTTGTACTCCTGCTaGTTTGGTCTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAILYSC*FGLTSL
Trigger: CAGTGATGTCAGACCAAACCAGCAGGAGTACAAAAT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTATTAGCCGACTGCGAATaGGCAAACTTTGTACCATCA +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLLADCE*ANFVPS
Trigger: TGATGGTACAAAGTTTGCCCATTCGCAGTCGGCTAA...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATCAATGAGCAGAGAGTaGACTCCGGTCTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTSMSRE*TPVSLT
Trigger: GGTCAGGGAGACCGGAGTCCACTCTCTGCTCATTGA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTCTGGTGCAAGGGATaGTCTCATTGTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLWCKG*SHCLSS
Trigger: GGAAGAAAGACAATGAGACCATCCCTTGCACCAGAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACGTATATATCCAGCCTaGCAGTGCACGACACGATGC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLERIYPA*QCTTRC
Trigger: GCATCGTGTCGTGCACTGCCAGGCTGGATATATACG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACTCAGCCCAGGCATATaGCTCCTAATTGCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTLSPGI*LLIAPS
Trigger: ACTAGGAGCAATTAGGAGCCATATGCCTGGGCTGAG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGCAACTTACTTGAGGTaGTGGAATTCCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSATYLR*WNSYHY
Trigger: ATAGTGGTAGGAATTCCACCACCTCAAGTAAGTTGC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACCAGTCTTGCCAAATTaGCACTTTCGTCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAPVLPN*HFRLIL
Trigger: AAGAATTAGACGAAAGTGTCAATTTGGCAAGACTGG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCAAAGGGTCGTAATTaGTGGCCAGTCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPKGRN*WPVLPN
Trigger: ATTTGGCAAGACTGGCCATCAATTACGACCCTTTGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATGGAGCTGTGGGATTTaGAAAGGGAGGATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTWSCGI*KGRIAL
Trigger: AAGAGCTATCCTCCCTTTTCAAATCCCACAGCTCCA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCCTGCCTGGACGATGTaGATATCTGGGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSPAWTM*ISGEFS
Trigger: TGAAAATTCCCCAGATATTCACATCGTCCAGGCAGG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGGTAGTGGGAGGAGATaGCACCTCATTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTGSGRR*HLIWLL
Trigger: CAGAAGCCAAATGAGGTGTCATCTCCTCCCACTACC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATGCTTGCAGTACATGTaGAGCACCCAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTCLQYM*STQNLL
Trigger: CAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATGCTTGCAGTACATGTaGAGCACCCAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTCLQYM*STQNLL
Trigger: CAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACAGCTGTGCAATGCTTaGCACTGTGCCGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTQLCNA*HCAVFV
Trigger: AACAAATACGGCACAGTGTCAAGCATTGCACAGCTG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGAGACCCGTTGTTGCTaGGGTCCTCATTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTETRCC*GPHFLS
Trigger: TGAGAGGAAATGAGGACCTCAGCAACAACGGGTCTC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTACTCCGAGAAGAGCATaGATACACCATCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSTPRRA*IHHRAF
Trigger: GAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTGGATGGCAACTGTGTaGCATCTTTGGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLWMATV*HLWFIC
Trigger: ACAGATGAACCAAAGATGTCACACAGTTGCCATCCA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGTGAGTTGTATGGCATaGCCTCCTAATGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTVSCMA*PPNAKW
Trigger: CCACTTAGCATTAGGAGGTCATGCCATACAACTCAC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTATACTGTGGCCTTTTTaGCTCCTGGGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSILWPF*LLGAFF
Trigger: AAAGAAAGCCCCCAGGAGGCAAAAAGGCCACAGTAT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTATACTGTGGCCTTTTTaGCTCCTGGGGGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVILWPF*LLGAFF
Trigger: AAAGAAAGCCCCCAGGAGGCAAAAAGGCCACAGTAT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGAATTCCTACCACTATaGAATCCAACTGTACTCGAG +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLEFLPL*NPTVLE
Trigger: CTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGCACCCAGAATCTTCTaGAAACACCTCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSAPRIF*KHLSND
Trigger: GTCATTGCTGAGGTGTTTGCAGAAGATTCTGGGTGC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGCACCCAGAATCTTCTaGAAACACCTCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTAPRIF*KHLSND
Trigger: GTCATTGCTGAGGTGTTTGCAGAAGATTCTGGGTGC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGCCGTATTTGTTGCTTaGAGTACATGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTAVFVA*STCEAP
Trigger: GGGTGCTTCACATGTACTGCAAGCAACAAATACGGC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTCATTTCCTCTCACGTaGAGCTGTGCAATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSSFPLT*SCAMLD
Trigger: GTCAAGCATTGCACAGCTGCACGTGAGAGGAAATGA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGAAGGAGCCTTCACCTaGTTACTGGATGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEEGAFT*LLDVVT
Trigger: GGTGACAACATCCAGTAAGCAGGTGAAGGCTCCTTC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCAAGTCTCGAATCACTaGGTTCTTAGTTTCACGAAT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSQVSNH*VLSFTN
Trigger: ATTCGTGAAACTAAGAACGCAGTGATTCGAGACTTG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAATATCCCCAGGAGCCTaGAGGAAATGTGGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEISPGA*RKCGRK
Trigger: TTTCCGACCACATTTCCTGCAGGCTCCTGGGGATAT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTGGCCACAAAATAAGTaGACTGTGCAATATCAAGTG +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSWPQNK*TVQYQV
Trigger: CACTTGATATTGCACAGTGCACTTATTTTGTGGCCA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATGGCCACAAAATAAGTaGACTGTGCAATATCAAGTG +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISAWPQNK*TVQYQV
Trigger: CACTTGATATTGCACAGTGCACTTATTTTGTGGCCA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAAAGCTGGTAAGGCCATaGTTTGGCCACAAAATAAGT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLKLVRP*FGHKIS
Trigger: ACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGACGATGTGAATATCTaGGGAATTTTCAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISADDVNI*GIFKLL
Trigger: AAGGAGCTTGAAAATTCCCCAGATATTCACATCGTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCAAAGGCTTCCGCAATaGTCAGTGAGTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSQRLPQ*SVSADF
Trigger: GAAATCTGCACTCACTGACCATTGCGGAAGCCTTTG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTCAACCTTAGGAGATaGAGCTCCTTTTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLNLRR*SSFYSA
Trigger: TGCAGAGTAAAAGGAGCTCCATCTCCTAAGGTTGAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACTGCGGTGGTGTTCGTaGAGGGGAAGAAATACTTCG +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTLRWCS*RGRNTS
Trigger: CGAAGTATTTCTTCCCCTCCACGAACACCACCGCAG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGATGGAAAGCCCTCCTaGAGATTTGGTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVDGKPS*RFGLHR
Trigger: TCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATTCTGTTGGGCCTGGTaGGAGTGGCTCATTTTGGAT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEFCWAW*EWLILD
Trigger: ATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATTCTTCGCTAATCCCTaGGATGGCATGGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEFFANP*DGMDGA
Trigger: TGCACCATCCATGCCATCCCAGGGATTAGCGAAGAA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCAATACACTTGCCCGTaGGGATCTCATCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLQYTCP*GSHHVE
Trigger: TTCAACATGATGAGATCCCCACGGGCAAGTGTATTG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGAACCAGTAAACCTTTaGAACAGGTATCCCAACAAT +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSEPVNL*NRYPNN
Trigger: ATTGTTGGGATACCTGTTCCAAAGGTTTACTGGTTC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTTTGTACCATCAAGTaGCCAGAACAGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLCTIK*PEQLIL
Trigger: GAGAATCAGCTGTTCTGGCCACTTGATGGTACAAAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTTTCTTCACCTCTTTaGCTACTACAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLSSPL*LLQRAP
Trigger: TGGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACTCTGGTGCAAGGGATaGTCTCATTGTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTLWCKG*SHCLSS
Trigger: GGAAGAAAGACAATGAGACCATCCCTTGCACCAGAG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACTCTGGTGCAAGGGATaGTCTCATTGTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTLWCKG*SHCLSS
Trigger: GGAAGAAAGACAATGAGACCATCCCTTGCACCAGAG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTACCCTGTTGTGTCCTaGTGCATACTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSYPVVS*CILILS
Trigger: AGAGAGGATCAGTATGCACCAGGACACAACAGGGTA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACTCAGCCCAGGCATATaGCTCCTAATTGCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLELSPGI*LLIAPS
Trigger: ACTAGGAGCAATTAGGAGCCATATGCCTGGGCTGAG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTATGAGGTGTATTTTATaGGCAAATGATGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPQLRLQESLADLFKALFMRCIL*ANDDSC
Trigger: GCAAGAGTCATCATTTGCCCATAAAATACACCTCAT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGGACTGGTGTGTGGGTaGCATATTCCTGCAGAATAT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTGLVCG*HIPAEY
Trigger: ATATTCTGCAGGAATATGCCACCCACACACCAGTCC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGAGGAAGTCTTCACTTaGACGGTAAGCATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTEEVFT*TVSMGE
Trigger: TTCTCCCATGCTTACCGTCCAAGTGAAGACTTCCTC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354393.6
3UTR CAA 72 bp TTTCCCAAAGCAGTGGATGGCAACTGTGTGACATCTTaGGTTCATCTGTATTATCTTCTCACATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FPKAVDGNCVTS*VHLYYLLTSLL
Trigger: CAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTCATCATTCACTGGTTaGGGAGACTTTGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSSFTG*GDFVFF
Trigger: GAAAAATACAAAGTCTCCTCAACCAGTGAATGATGA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATCATCATTCACTGGTTaGGGAGACTTTGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: ENSADKLVRPCFGHKISASSFTG*GDFVFF
Trigger: GAAAAATACAAAGTCTCCTCAACCAGTGAATGATGA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAACTCCGAGAAGAGCATaGATACACCATCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLETPRRA*IHHRAF
Trigger: GAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTGGATGGCAACTGTGTaGCATCTTTGGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVWMATV*HLWFIC
Trigger: ACAGATGAACCAAAGATGTCACACAGTTGCCATCCA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLGIVW*VSHILR
Trigger: CCTTAGGATATGACTAACTCACCAAACAATGCCAAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAAATACAATGCCAGCTaGGTGTGCTTGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEKYNAS*VCLAQT
Trigger: TGTCTGTGCCAAGCACACTCAGCTGGCATTGTATTT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTATCCAGGCACTCCACTaGAATGATAATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSIQALH*NDNYPG
Trigger: CCCTGGATAATTATCATTGCAGTGGAGTGCCTGGAT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGCACCCAGAATCTTCTaGAAACACCTCAGCAATGAC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEAPRIF*KHLSND
Trigger: GTCATTGCTGAGGTGTTTGCAGAAGATTCTGGGTGC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACAATGCTTGACACTGTaGCGTATTTGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTQCLTL*RICCLQ
Trigger: CTGCAAGCAACAAATACGGCACAGTGTCAAGCATTG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCAATGCTTGACACTGTaGCGTATTTGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSQCLTL*RICCLQ
Trigger: CTGCAAGCAACAAATACGGCACAGTGTCAAGCATTG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACAGAGGTTAGCCGACTaGGAATGGGCAAACTTTGTA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEQRLAD*EWANFV
Trigger: TACAAAGTTTGCCCATTCGCAGTCGGCTAACCTCTG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGACGATGTGAATATCTaGGGAATTTTCAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLDDVNI*GIFKLL
Trigger: AAGGAGCTTGAAAATTCCCCAGATATTCACATCGTC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACAAAGGCTTCCGCAATaGTCAGTGAGTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEQRLPQ*SVSADF
Trigger: GAAATCTGCACTCACTGACCATTGCGGAAGCCTTTG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACCTCATTTGGCTTCTaGATTCGATTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLTSFGF*IRFISS
Trigger: GGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGAGTGGAATCAAGTTTaGGTTTGGCCAGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEEWNQV*VWPELE
Trigger: CTCCAGTTCTGGCCAAACCCAAACTTGATTCCACTC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGATGGAAAGCCCTCCTaGAGATTTGGTTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEDGKPS*RFGLHR
Trigger: TCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAAATGTGAATGGTGGTaGTGTTGGTTCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEKCEWW*CWFCWA
Trigger: GGCCCAACAGAACCAACACCACCACCATTCACATTT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGATGGAAAATGTGAATaGTGGTGGTGTTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLDGKCE*WWCWFC
Trigger: ACAGAACCAACACCACCACCATTCACATTTTCCATC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTTTGTACCATCAAGTaGCCAGAACAGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLCTIK*PEQLIL
Trigger: GAGAATCAGCTGTTCTGGCCACTTGATGGTACAAAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACTTTGTACCATCAAGTaGCCAGAACAGCTGATTCTC +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTLCTIK*PEQLIL
Trigger: GAGAATCAGCTGTTCTGGCCACTTGATGGTACAAAG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTTAGCCGACTGCGAATaGGCAAACTTTGTACCATCA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLADCE*ANFVPS
Trigger: TGATGGTACAAAGTTTGCCCATTCGCAGTCGGCTAA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATCTGGTAGCACAGGTTaGCCATTGAGTAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTSGSTG*PLSSHV
Trigger: GACATGGCTACTCAATGGCCAACCTGTGCTACCAGA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTTTCTTCACCTCTTTaGCTACTACAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLSSPL*LLQRAP
Trigger: TGGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGGAAACCACCAAGTCTaGCTTGTTCTCATTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTGNHQV*LVLIPP
Trigger: AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATCCCAAAGCAGTGGATaGCAACTGTGTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTSQSSG*QLCDIF
Trigger: AAAGATGTCACACAGTTGCCATCCACTGCTTTGGGA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGTAAGGCCATGCTTTaGCCACAAAATAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGKAML*PQNKCT
Trigger: AGTGCACTTATTTTGTGGCCAAAGCATGGCCTTACC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGTAAGGCCATGCTTTaGCCACAAAATAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGKAML*PQNKCT
Trigger: AGTGCACTTATTTTGTGGCCAAAGCATGGCCTTACC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCATGAGGTGTATTTTATaGGCAAATGATGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: ICKSKVFARIRELYGMTSMRCIL*ANDDSC
Trigger: GCAAGAGTCATCATTTGCCCATAAAATACACCTCAT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGGTGAGTGTTTCATCTaGTCAGGAGAAAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTGECFI*SGESRF
Trigger: AAAACGACTTTCTCCTGATCAGATGAAACACTCACC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACCTGCCTGGACGATGTaGATATCTGGGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTPAWTM*ISGEFS
Trigger: TGAAAATTCCCCAGATATTCACATCGTCCAGGCAGG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACAGCTGTGCAATGCTTaGCACTGTGCCGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTQLCNA*HCAVFV
Trigger: AACAAATACGGCACAGTGTCAAGCATTGCACAGCTG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAAACTCCTTAGGAGATaGAGGAGGTGGGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEKLLRR*RRWVLQ
Trigger: TTGCAAAACCCACCTCCTTCATCTCCTAAGGAGTTT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGCAAGAATCCCTAGCTaGCTTATTCAAAGCACTCTT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVARIPS*LIQSTL
Trigger: AAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATGGATGGCAACTGTGTaGCATCTTTGGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEWMATV*HLWFIC
Trigger: ACAGATGAACCAAAGATGTCACACAGTTGCCATCCA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTATCCTTGCCTTGAAGTaGAGACAGTTTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVILALK*RQFQAF
Trigger: AAAGGCTTGAAACTGTCTTCACTTCAAGGCAAGGAT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATGGAAATCCTTGCCTTaGAGTGAAGACAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTWKSLP*SEDSFK
Trigger: CTTGAAACTGTCTTCACTTCAAGGCAAGGATTTCCA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTATTGATGGCCAGTCTTaGCAAATTGACACTTTCGTC +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVIDGQS*QIDTFV
Trigger: GACGAAAGTGTCAATTTGGCAAGACTGGCCATCAAT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGAATTCCTACCACTATaGAATCCAACTGTACTCGAG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVEFLPL*NPTVLE
Trigger: CTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTAAGCTGGTAAGGCCATaGTTTGGCCACAAAATAAGT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVKLVRP*FGHKIS
Trigger: ACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACTTCGAGGGTTATCCTaGCAGAAGTTAGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLELRGLS*QKLGSK
Trigger: TTTTGAGCCTAACTTCTGCCAGGATAACCCTCGAAG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTACCTCATTTGGCTTCTaGATTCGATTCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSTSFGF*IRFISS
Trigger: GGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGCTGTTGTAACTGAGTaGAATCAAGTTTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTAVVTE*NQVWVW
Trigger: CCAAACCCAAACTTGATTCCACTCAGTTACAACAGC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGTGGGTTTTGCAATTaGTGTTGTTCCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGGFCN*CCSSKT
Trigger: AGTCTTACTGGAACAACACCAATTGCAAAACCCACC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAAAATGTGAATGGTGGTaGTGTTGGTTCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTKCEWW*CWFCWA
Trigger: GGCCCAACAGAACCAACACCACCACCATTCACATTT...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAATTTTGTACTCCTGCTaGTTTGGTCTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTILYSC*FGLTSL
Trigger: CAGTGATGTCAGACCAAACCAGCAGGAGTACAAAAT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTATTTTGTACTCCTGCTaGTTTGGTCTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVILYSC*FGLTSL
Trigger: CAGTGATGTCAGACCAAACCAGCAGGAGTACAAAAT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGAACCAGTAAACCTTTaGAACAGGTATCCCAACAAT +
Preference number: 4 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLEPVNL*NRYPNN
Trigger: ATTGTTGGGATACCTGTTCCAAAGGTTTACTGGTTC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTACTTACTTGAGGTGGTaGAATTCCTACCACTATGCA +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSTYLRW*NSYHYA
Trigger: TGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR TCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCAGTCTTGCCAAATTaGCACTTTCGTCTAATTCTT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPVLPN*HFRLIL
Trigger: AAGAATTAGACGAAAGTGTCAATTTGGCAAGACTGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAGGATAGCTCTTCAATaGAGTCGGCAGCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLERIALQ*SRQPYL
Trigger: TAAATAAGGCTGCCGACTTCATTGAAGAGCTATCCT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGCAAGAATCCCTAGCTaGCTTATTCAAAGCACTCTT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEARIPS*LIQSTL
Trigger: AAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLELGIVW*VSHILR
Trigger: CCTTAGGATATGACTAACTCACCAAACAATGCCAAG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATGGAAATCCTTGCCTTaGAGTGAAGACAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEWKSLP*SEDSFK
Trigger: CTTGAAACTGTCTTCACTTCAAGGCAAGGATTTCCA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAATTGATGGCCAGTCTTaGCAAATTGACACTTTCGTC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEIDGQS*QIDTFV
Trigger: GACGAAAGTGTCAATTTGGCAAGACTGGCCATCAAT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAAATTTTCAAGCTCCTTaGCTTCACAGTACCACCTTA +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTNFQAP*LHSTTL
Trigger: TAAGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATT...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR GCA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACAAGTCTCGAATCACTaGGTTCTTAGTTTCACGAAT +
Preference number: 4 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTQVSNH*VLSFTN
Trigger: ATTCGTGAAACTAAGAACGCAGTGATTCGAGACTTG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAAGCTGGTAAGGCCATaGTTTGGCCACAAAATAAGT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEKLVRP*FGHKIS
Trigger: ACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTATGCTGGAAATCCTTaGCTTGAAGTGAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVYAGNP*LEVKTV
Trigger: AACTGTCTTCACTTCAAGGCAAGGATTTCCAGCATA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTAATTTTCAAGCTCCTTaGCTTCACAGTACCACCAAA +
Preference number: 4 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVNFQAP*LHSTTK
Trigger: TTTGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATCGTCTAATTCTTCTTaGCTCAGAAAGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTSSNSS*LRKAER
Trigger: TCTTTCAGCCTTTCTGAGCCAAGAAGAATTAGACGA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACCTTACTTGAGGTGGTaGAATTCCTACCACTATGCA +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTPYLRW*NSYHYA
Trigger: TGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGACGATGTGAATATCTaGGGAATTTTCAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSDDVNI*GIFKLL
Trigger: AAGGAGCTTGAAAATTCCCCAGATATTCACATCGTC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGGTGGGTTTTGCAATTaGTGTTGTTCCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEGGFCN*CCSSKT
Trigger: AGTCTTACTGGAACAACACCAATTGCAAAACCCACC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGAACCAGTAAACCTTTaGAACAGGTATCCCAACAAT +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTEPVNL*NRYPNN
Trigger: ATTGTTGGGATACCTGTTCCAAAGGTTTACTGGTTC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACTTTCTTCACCTCTTTaGCTACTACAGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTLSSPL*LLQRAP
Trigger: TGGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACCATCGTGCTTTCCATaGAGGAAAAGGCAGAAAATA +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEPSCFP*RKRQKI
Trigger: TATTTTCTGCCTTTTCCTCCATGGAAAGCACGATGG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGGTGAGTGTTTCATCTaGTCAGGAGAAAGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTGECFI*SGESRF
Trigger: AAAACGACTTTCTCCTGATCAGATGAAACACTCACC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATTGAATTTCATCATCTaGTTCATCAACAGGAGTACG +
Preference number: 4 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTLNFII*FINRST
Trigger: CGTACTCCTGTTGATGAATCAGATGATGAAATTCAA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACTTGGCATTGTTTGGTaGGTTAGTCATATCCTAAGG +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTLGIVW*VSHILR
Trigger: CCTTAGGATATGACTAACTCACCAAACAATGCCAAG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCAGAGGATTTCTTTCTaGTTGGTTTATTACCAATCC +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSQRISF*LVYYQS
Trigger: GGATTGGTAATAAACCAATCAGAAAGAAATCCTCTG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR TCA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACAGAGGATTTCTTTCTaGTTGGTTTATTACCAATCC +
Preference number: 4 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEQRISF*LVYYQS
Trigger: GGATTGGTAATAAACCAATCAGAAAGAAATCCTCTG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR GCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAAGTACACCCAGGATATaGAAATCAAAAGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTSTPRI*KSKVFA
Trigger: GGCAAACACTTTTGATTTGCATATCCTGGGTGTACT...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATCGTCTAATTCTTCTTaGCTCAGAAAGGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTSSNSS*LRKAER
Trigger: TCTTTCAGCCTTTCTGAGCCAAGAAGAATTAGACGA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGTTATCATCATTCACTaGTTGAGGAGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSVIIIH*LRRLCI
Trigger: AATACAAAGTCTCCTCAACCAGTGAATGATGATAAC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAATGAGGTGTATTTTATaGGCAAATGATGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTMRCIL*ANDDSC
Trigger: GCAAGAGTCATCATTTGCCCATAAAATACACCTCAT...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
3UTR CAA 72 bp AGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTaGGAATCTCAAGCACATTTTGACACCTTATTATGT +
Preference number: 4 (lower is better)
Translates to: SALCNIKCFSKF*ESQAHFDTLLC
Trigger: ACATAATAAGGTGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CCA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGTTATCATCATTCACTaGTTGAGGAGACTTTGTATT +
Preference number: 4 (lower is better)
Translates to: CAISSVSASFWNLKHILTVIIIH*LRRLCI
Trigger: AATACAAAGTCTCCTCAACCAGTGAATGATGATAAC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp GAAGGTCATCTTGGCCTCCGCCTCCTTCAGCGGCCCCAGAAGGACTaGCGAAATGGCAAGGGTTGGAGGAGGGCTCCGCTCGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: EGHLGLRLLQRPQKD*RNGKGWRRAPLDSS
Trigger: AGAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTGAAGGAGGCGGAGGCCAAGATGACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp CGCCTCCTTCAGCGGCCCCAGAAGGACTGCCGAAATGGCAAGGGTTaGAGGAGGGCTCCGCTCGACTCCTCTCATTGTTTCCCCGATGTC +
Preference number: 5 (lower is better)
Translates to: RLLQRPQKDCRNGKG*RRAPLDSSHCFPDV
Trigger: GACATCGGGGAAACAATGAGAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTGAAGGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp TCTTGGCCTCCGCCTCCTTCAGCGGCCCCAGAAGGACTGCCGAAATaGCAAGGGTTGGAGGAGGGCTCCGCTCGACTCCTCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: SWPPPPSAAPEGLPK*QGLEEGSARLLSLF
Trigger: AAACAATGAGAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTGAAGGAGGCGGAGGCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCGACACTGCTGGATGGTaGCCACACGAGGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTDTAGW*PHEVGP
Trigger: TGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGTC...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS CCA 90 bp ACAGGTGGGGGCATGCCTATCACGCGGCACTCCAGTCTCACGGGGTaGCCTTCGGGAACACCGCAGTTCTGTAGTTTCTCCAGGATCACA +
Preference number: 5 (lower is better)
Translates to: TGGGMPITRHSSLTG*PSGTPQFCSFSRIT
Trigger: TGTGATCCTGGAGAAACTACAGAACTGCGGTGTTCCCGAAGGCCACCCCGTGAGACTGGAGTGCCGCGTGATAGGCATGCCCCCACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCATCTGGAAGGTCATCTaGGCCTCCGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTIWKVI*ASASFS
Trigger: GCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGAT...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCGGTTGCCACACGAGGTaGGGCCACCAAATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATGCHTR*GHQMLG
Trigger: GCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACC...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS CCA 90 bp GTCTCCCTGACCAGCATCTTGTGGGAGGCATCTGGTAGCACAGGTTaGCCATTGAGTAGCCATGTCAGCTCCGGGGGCGGTAAACCACTC +
Preference number: 5 (lower is better)
Translates to: VSLTSILWEASGSTG*PLSSHVSSGGGKPL
Trigger: GAGTGGTTTACCGCCCCCGGAGCTGACATGGCTACTCAATGGCCAACCTGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp GGTGCAAGGGATGGTCTCATTGTCTTTCTTCCAGTAGAACACAGGTaGGGGCATGCCTATCACGCGGCACTCCAGTCTCACGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GARDGLIVFLPVEHR*GHAYHAALQSHGVA
Trigger: GGCCACCCCGTGAGACTGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGGAAGAAAGACAATGAGACCATCCCTTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCAGTGAACCGGGGAGGTaGCCCCAGAGGTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTSEPGR*PQRFFI
Trigger: TATGAAGAACCTCTGGGGCAACCTCCCCGGTTCACT...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCCACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTHQMLG*GYCWRN
Trigger: ATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTG...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS TCA 90 bp GCCTGCTCCGCTTCACGCCTCTTGGCTTCCTGCTGTTCCAGGGCGTaGTTCACTTCATTATCCCTGGTATCCGCAGGGATAGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: ACSASRLLASCCSRA*FTSLSLVSAGIGMG
Trigger: TCCCATCCCTATCCCTGCGGATACCAGGGATAATGAAGTGAATCACGCCCTGGAACAGCAGGAAGCCAAGAGGCGTGAAGCGGAGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp GCAGGGAGAGAAGGCAGAACAGAGCTGAGGAAAGCCACTGGGTTCTaGATCCGGCTGGTAGGAGAGACAGGAATTGGGGACACACAGCGG +
Preference number: 5 (lower is better)
Translates to: AGREGRTELRKATGF*IRLVGETGIGDTQR
Trigger: CCGCTGTGTGTCCCCAATTCCTGTCTCTCCTACCAGCCGGATTCAGAACCCAGTGGCTTTCCTCAGCTCTGTTCTGCCTTCTCTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp GGATGGTCTCATTGTCTTTCTTCCAGTAGAACACAGGTGGGGGCATaGCTATCACGCGGCACTCCAGTCTCACGGGGTGGCCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: GWSHCLSSSRTQVGA*LSRGTPVSRGGLRE
Trigger: TTCCCGAAGGCCACCCCGTGAGACTGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGGAAGAAAGACAATGAGACCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp TGCTGGATGGTTGCCACACGAGGTTGGGCCACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATGACTGCAGAGGTAGTGGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: CWMVATRGWATKCWA*GTAGGMTAEVVGGD
Trigger: ATCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACCATCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp GAAAGCCACTGGGTTCTGAATCCGGCTGGTAGGAGAGACAGGAATTaGGGACACACAGCGGGGCTGAAACTGGTTTCCGCTGGGGATGGA +
Preference number: 5 (lower is better)
Translates to: ESHWVLNPAGRRDRN*GHTAGLKLVSAGDG
Trigger: TCCATCCCCAGCGGAAACCAGTTTCAGCCCCGCTGTGTGTCCCCAATTCCTGTCTCTCCTACCAGCCGGATTCAGAACCCAGTGGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp GTTGGTAGCGATGCACTTATAGGTCCCTGCGTCGCGCTGAGTGAGTaGGTCAATGAGCAGAGAGTGGACTCCGGTCTCCCTGACCAGCAT +
Preference number: 5 (lower is better)
Translates to: VGSDALIGPCVALSE*VNEQRVDSGLPDQH
Trigger: ATGCTGGTCAGGGAGACCGGAGTCCACTCTCTGCTCATTGACCCACTCACTCAGCGCGACGCAGGGACCTATAAGTGCATCGCTACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp ATCGGGCCTGGTCTGTCTGGTGGTCACCACACCAGCCTCGGAGGATaGTTCACTTCCTTTGTCATCTTCAGGCAGGTTGAAGTGCACACG +
Preference number: 5 (lower is better)
Translates to: IGPGLSGGHHTSLGG*FTSFVIFRQVEVHT
Trigger: CGTGTGCACTTCAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGTGTGGTGACCACCAGACAGACCAGGCCCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp GAAGAAGGCTCTGGGGTTTTTGTTGCCTGTCCGTTGAACCTCTCCTaGAAAGAATCGGGCCTGGTCTGTCTGGTGGTCACCACACCAGCC +
Preference number: 5 (lower is better)
Translates to: EEGSGVFVACPLNLS*KESGLVCLVVTTPA
Trigger: GGCTGGTGTGGTGACCACCAGACAGACCAGGCCCGATTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAAAAACCCCAGAGCCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCACCCGATTCATCTCTTCCTaGTTAGGGTCGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LSRSWTVVSRSRLTATSTRFISS*LGSPSE
Trigger: CTCAGAAGGCGACCCTAACAAGGAAGAGATGAATCG...GGTGGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGACACTGCTGGATGGTaGCCACACGAGGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSDTAGW*PHEVGP
Trigger: TGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGTC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGTGGTGTTGGTTCTGTaGGGCCTGGTGGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSVVLVL*GLVGVA
Trigger: AGCCACTCCCACCAGGCCCAACAGAACCAACACCAC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp GGAGGGCTGTGGCTCAATAGCTGCCAGGTTGGTGGTAGAGTTGGCTaGGTGAAGAGACCCGTTGTTGCTGAGGTCCTCATTTCCTCTCAC +
Preference number: 5 (lower is better)
Translates to: GGLWLNSCQVGGRVG*VKRPVVAEVLISSH
Trigger: GTGAGAGGAAATGAGGACCTCAGCAACAACGGGTCTCTTCACTCAGCCAACTCTACCACCAACCTGGCAGCTATTGAGCCACAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp CGGTGGTGTTCGTGGAGGGGAAGAAATACTTCGGCCGGGCCAAGCTaGACGTCTGTGATGAAGGAGCCTTCACCTGCTTACTGGATGTTG +
Preference number: 5 (lower is better)
Translates to: RWCSWRGRNTSAGPS*TSVMKEPSPAYWML
Trigger: CAACATCCAGTAAGCAGGTGAAGGCTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGAAGTATTTCTTCCCCTCCACGAACACCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp TTCGGCCGGGCCAAGCTGAACGTCTGTGATGAAGGAGCCTTCACCTaGTTACTGGATGTTGTCACCGCTGGGGGAGCATTGGAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: FGRAKLNVCDEGAFT*LLDVVTAGGALEFK
Trigger: TTTGAACTCCAATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGGCTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCGCTCGACTCCTCTCATaGTTTCCCCGATGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATARLLS*FPRCLV
Trigger: AACCAGACATCGGGGAAACAATGAGAGGAGTCGAGC...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGGTTGCCACACGAGGTaGGGCCACCAAATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPGCHTR*GHQMLG
Trigger: GCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCTGGACCGGGGCTCATaGTGGTTCACCAGAACCCCC +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPLDRGS*WFTRTP
Trigger: GGGGGTTCTGGTGAACCACAATGAGCCCCGGTCCAG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCCGGAGCCAGAGCATTaGTCAGCTCACAGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSPEPEH*SAHRSQ
Trigger: TTGGGACCTGTGAGCTGACAAATGCTCTGGCTCCGG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS GCA 90 bp AGAATTCTGCCCGGTTTTGTTGGTAGCGATGCACTTATAGGTCCCTaGGTCGCGCTGAGTGAGTGGGTCAATGAGCAGAGAGTGGACTCC +
Preference number: 5 (lower is better)
Translates to: RILPGFVGSDALIGP*VALSEWVNEQRVDS
Trigger: GGAGTCCACTCTCTGCTCATTGACCCACTCACTCAGCGCGACGCAGGGACCTATAAGTGCATCGCTACCAACAAAACCGGGCAGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp AATTCTTCTTGGCTCAGAAAGGCTGAAAGATCTGGAAGGTCATCTTaGCCTCCGCCTCCTTCAGCGGCCCCAGAAGGACTGCCGAAATGG +
Preference number: 5 (lower is better)
Translates to: NSSWLRKAERSGRSS*PPPPSAAPEGLPKW
Trigger: CCATTTCGGCAGTCCTTCTGGGGCCGCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCAAGAAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp GTGGTGTTGGTTCTGTTGGGCCTGGTGGGAGTGGCTCATTTTGGATaGAAAGCCCTCCTGGAGATTTGGTTTGCACAGAGGGGTGAGACA +
Preference number: 5 (lower is better)
Translates to: VVLVLLGLVGVAHFG*KALLEIWFAQRGET
Trigger: TGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAACCAACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCCACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSHQMLG*GYCWRN
Trigger: ATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTG...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTTCCCAGGGCAGTGTTaGGACTGGTGTGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPFPGQC*DWCVGG
Trigger: GCCACCCACACACCAGTCCAAACACTGCCCTGGGAA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTCCGAAATGGCAAGGGTaGGAGGAGGGCTCCGCTCGA +
Preference number: 5 (lower is better)
Translates to: GVSFCHVGQAGLELLISSPKWQG*EEGSAR
Trigger: TCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGG...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAATCTGGAAGGTCATCTaGGCCTCCGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQIWKVI*ASASFS
Trigger: GCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGAT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCTCCGAGATGACACCTCATTaGGCTTCTGGATTCGATTCA +
Preference number: 5 (lower is better)
Translates to: VLSRSWTVVSRSRLTATSEMTPH*ASGFDS
Trigger: TGAATCGAATCCAGAAGCCAAATGAGGTGTCATCTC...GGAGGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGTTGCCACACGAGGTaGGGCCACCAAATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGCHTR*GHQMLG
Trigger: GCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGACACTGCTGGATGGTaGCCACACGAGGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQDTAGW*PHEVGP
Trigger: TGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGTC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCTCAATAGCTGCCAGGTaGGTGGTAGAGTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTSIAAR*VVELAE
Trigger: CTCAGCCAACTCTACCACCAACCTGGCAGCTATTGA...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCTCATCTTCAGGCAGGTaGAAGTGCACACGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSSSSGR*KCTRSP
Trigger: TGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGA...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCACCGCTGGGGGAGCATaGGAGTTCAAAACAGTCATG +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSTAGGA*EFKTVM
Trigger: CATGACTGTTTTGAACTCCAATGCTCCCCCAGCGGT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCTGCTTACTGGATGTaGTCACCGCTGGGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPPAYWM*SPLGEH
Trigger: ATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCATGGGAGCAATACACTaGCCCGTGGGGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTMGAIH*PVGISS
Trigger: TGATGAGATCCCCACGGGCAAGTGTATTGCTCCCAT...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCAAATTCTTCACGCCCTaGGAAATAGAGAGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATKFFTP*EIESSR
Trigger: ACGGCTACTCTCTATTTCCAAGGGCGTGAAGAATTT...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGACACTGCTGGATGGTaGCCACACGAGGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKDTAGW*PHEVGP
Trigger: TGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGTC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTGGACCGGGGCTCATaGTGGTTCACCAGAACCCCC +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLDRGS*WFTRTP
Trigger: GGGGGTTCTGGTGAACCACAATGAGCCCCGGTCCAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGAATCAAGTTTGGGTTaGGCCAGAACTGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPESSLG*ARTGGG
Trigger: GCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATTC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGTGGTGTTGGTTCTGTaGGGCCTGGTGGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFVVLVL*GLVGVA
Trigger: AGCCACTCCCACCAGGCCCAACAGAACCAACACCAC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGCGAATGGGCAAACTTaGTACCATCAAGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSANGQT*YHQVAR
Trigger: TCTGGCCACTTGATGGTACAAAGTTTGCCCATTCGC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGCTTTCTTCACCTCTTaGGCTACTACAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTAFFTS*ATTESS
Trigger: GGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAGC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp GTTGCTGAGGTCCTCATTTCCTCTCACGTGCAGCTGTGCAATGCTTaGCACTGTGCCGTATTTGTTGCTTGCAGTACATGTGAAGCACCC +
Preference number: 5 (lower is better)
Translates to: VAEVLISSHVQLCNA*HCAVFVACSTCEAP
Trigger: GGGTGCTTCACATGTACTGCAAGCAACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGTGAGAGGAAATGAGGACCTCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp CTGGTGGGAGTGGCTCATTTTGGATGGAAAGCCCTCCTGGAGATTTaGTTTGCACAGAGGGGTGAGACACTAAGAGGCTTTCTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LVGVAHFGWKALLEI*FAQRGETLRGFLCS
Trigger: TGAGCAAAGAAAGCCTCTTAGTGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACCGAAATGGCAAGGGTaGGAGGAGGGCTCCGCTCGA +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLPKWQG*EEGSAR
Trigger: TCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTATCTGGAAGGTCATCTaGGCCTCCGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFIWKVI*ASASFS
Trigger: GCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGAT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTCACTGCAACCAAGTCGTTTTCTAGCTaGAGTTTCATCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LVLSRSWTVVSRSRLTATKSFSS*SFICLL
Trigger: GAGAAGGCAGATGAAACTCAAGCTAGAAAACGACTT...GGTTGCAGTGAGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCACAGTACCACCTTACTaGAGGTGGTGGAATTCCTAC +
Preference number: 5 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTTVPPY*RWWNSY
Trigger: GTAGGAATTCCACCACCTCAAGTAAGGTGGTACTGT...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCAATAGCTGCCAGGTaGGTGGTAGAGTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSIAAR*VVELAE
Trigger: CTCAGCCAACTCTACCACCAACCTGGCAGCTATTGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAACCGCTGGGGGAGCATaGGAGTTCAAAACAGTCATG +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQTAGGA*EFKTVM
Trigger: CATGACTGTTTTGAACTCCAATGCTCCCCCAGCGGT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATCCTGGAGATTTGGTTaGCACAGAGGGGTGAGACAC +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQSWRFG*HRGVRH
Trigger: GTGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAATGGGAGCAATACACTaGCCCGTGGGGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQMGAIH*PVGISS
Trigger: TGATGAGATCCCCACGGGCAAGTGTATTGCTCCCAT...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTTCCTGTAGGGGCTCTTaGTCTCTTTCTTGCACTCGG +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPSCRGS*SLSCTR
Trigger: CCGAGTGCAAGAAAGAGACAAAGAGCCCCTACAGGA...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATTCCCAGGGCAGTGTTaGGACTGGTGTGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAFPGQC*DWCVGG
Trigger: GCCACCCACACACCAGTCCAAACACTGCCCTGGGAA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp GCTTCCGCAATGGTCAGTGAGTGCAGATTTCCTGCCTGGACGATGTaGATATCTGGGGAATTTTCAAGCTCCTTGCCTTCACAGTACCAC +
Preference number: 5 (lower is better)
Translates to: ASAMVSECRFPAWTM*ISGEFSSSLPSQYH
Trigger: GTGGTACTGTGAAGGCAAGGAGCTTGAAAATTCCCCAGATATTCACATCGTCCAGGCAGGAAATCTGCACTCACTGACCATTGCGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp GGAATAGCGTCCTGTGTCCTCTTCAAAGGCTTCCGCAATGGTCAGTaGGTGCAGATTTCCTGCCTGGACGATGTGAATATCTGGGGAATT +
Preference number: 5 (lower is better)
Translates to: GIASCVLFKGFRNGQ*VQISCLDDVNIWGI
Trigger: AATTCCCCAGATATTCACATCGTCCAGGCAGGAAATCTGCACTCACTGACCATTGCGGAAGCCTTTGAAGAGGACACAGGACGCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp AAATGCCCAAACTCTCTGTCAGAAGTGTTTTTGTCCTTACTCAGATaGCCAGGATGGCCTCAGCAGGCCTTTCACGCACAAGGATGGCTT +
Preference number: 5 (lower is better)
Translates to: KCPNSLSEVFLSLLR*PGWPQQAFHAQGWL
Trigger: AAGCCATCCTTGTGCGTGAAAGGCCTGCTGAGGCCATCCTGGCCATCTGAGTAAGGACAAAAACACTTCTGACAGAGAGTTTGGGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp GAGACAGATTCTTGTTCTGTCGCGCAGCTGGACTGTAGTGTCACGATCTCGGCTGATTCCAGTTTACTCTaGTGGTTTTTGCAGGCACGA +
Preference number: 5 (lower is better)
Translates to: ETDSCSVAQLDCSVTISADSSLL*WFLQAR
Trigger: TCGTGCCTGCAAAAACCACAAGAGTAAACTGGAATC...AGCCGAGATCGTGACACTACAGTCCAGCTGCGCGACAGAACAAGAATCTGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTAGTGAACCGGGGAGGTaGCCCCAGAGGTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFSEPGR*PQRFFI
Trigger: TATGAAGAACCTCTGGGGCAACCTCCCCGGTTCACT...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAACGATTCATCTCTTCCTaGTTAGGGTCGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQRFISS*LGSPSE
Trigger: CTCAGAAGGCGACCCTAACAAGGAAGAGATGAATCG...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GCTTGGCACAGACAGCACCAGGGATTCCAGCACAGGGAATTGAAAACAGACACCGAGATGACACCTCATTaGGCTTCTGGATTCGATTCA +
Preference number: 5 (lower is better)
Translates to: AWHRQHQGFQHRELKTDTEMTPH*ASGFDS
Trigger: TGAATCGAATCCAGAAGCCAAATGAGGTGTCATCTC...GGTGTCTGTTTTCAATTCCCTGTGCTGGAATCCCTGGTGCTGTCTGTGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGCAGCTGTGCAATGCTaGACACTGTGCCGTATTTGT +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQAAVQC*TLCRIC
Trigger: ACAAATACGGCACAGTGTCAAGCATTGCACAGCTGC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTCAATAGCTGCCAGGTaGGTGGTAGAGTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQSIAAR*VVELAE
Trigger: CTCAGCCAACTCTACCACCAACCTGGCAGCTATTGA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTTGGGAGTGGCTCATTTaGGATGGAAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFWEWLI*DGKPSW
Trigger: CCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCA...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGTGACCCGGAAGTGCTaGAGTCTCTTGTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPVTRKC*SLLSKM
Trigger: CATCTTTGACAAGAGACTCAAGCACTTCCGGGTCAC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGTGACCCGGAAGTGCTaGAGTCTCTTGTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQVTRKC*SLLSKM
Trigger: CATCTTTGACAAGAGACTCAAGCACTTCCGGGTCAC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTCCCTGACCAGCATCTaGTGGGAGGCATCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSLTSI*WEASGS
Trigger: GCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGCTTTCTTCACCTCTTaGGCTACTACAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPAFFTS*ATTESS
Trigger: GGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAGC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp ATTTTGCAGGTGAATGTAACTGGAGAGCCTTCTGTGACCCGGAAGTaGTTGAGTCTCTTGTCAAAGATGGGAGCAATACACTTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: ILQVNVTGEPSVTRK*LSLLSKMGAIHLPV
Trigger: CACGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGAAGGCTCTCCAGTTACATTCACCTGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 90 bp AGTGAGGAGTTAACCTTAGTTTCAGTGAAGATGGCTGTAAGAAGCTaGACAACCTGTCACCACCGGAGCCAGAGCATTTGTCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: SEELTLVSVKMAVRS*TTCHHRSQSICQLT
Trigger: TGTGAGCTGACAAATGCTCTGGCTCCGGTGGTGACAGGTTGTCCAGCTTCTTACAGCCATCTTCACTGAAACTAAGGTTAACTCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCGAAATGGCAAGGGTaGGAGGAGGGCTCCGCTCGA +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPKWQG*EEGSAR
Trigger: TCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCCGAAATGGCAAGGGTaGGAGGAGGGCTCCGCTCGA +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVPKWQG*EEGSAR
Trigger: TCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAAGTCGTTTTCTAGCTaGAGTTTCATCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSKSFSS*SFICLL
Trigger: GAGAAGGCAGATGAAACTCAAGCTAGAAAACGACTT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGTTGCCACACGAGGTaGGGCCACCAAATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGCHTR*GHQMLG
Trigger: GCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGGTTGCCACACGAGGTaGGGCCACCAAATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTGCHTR*GHQMLG
Trigger: GCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGCAGCTGTGCAATGCTaGACACTGTGCCGTATTTGT +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQAAVQC*TLCRIC
Trigger: ACAAATACGGCACAGTGTCAAGCATTGCACAGCTGC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCTGGACCGGGGCTCATaGTGGTTCACCAGAACCCCC +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSLDRGS*WFTRTP
Trigger: GGGGGTTCTGGTGAACCACAATGAGCCCCGGTCCAG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGATGCTTCACTTCCTTaGTCATCTTCAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQDASLP*SSSGRL
Trigger: CAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGAATCAAGTTTGGGTTaGGCCAGAACTGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAESSLG*ARTGGG
Trigger: GCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATGGGAGTGGCTCATTTaGGATGGAAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAWEWLI*DGKPSW
Trigger: CCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAATGGGAGCAATACACTaGCCCGTGGGGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKMGAIH*PVGISS
Trigger: TGATGAGATCCCCACGGGCAAGTGTATTGCTCCCAT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCGGTATCCCAACAATTTaGCAGGTGAATGTAACTGGA +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSGIPTI*QVNVTG
Trigger: TCCAGTTACATTCACCTGCAAAATTGTTGGGATACC...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAAGCACAGGTTGGCCATaGAGTAGCCATGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISASTGWP*SSHVSS
Trigger: GGAGCTGACATGGCTACTCAATGGCCAACCTGTGCT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp CTTCACAGTACCACCTTACTTGAGGTGGTGGAATTCCTACCACTATaGAATCCAACTGTACTCGAGTTCCTTCTGGAACTTCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LHSTTLLEVVEFLPL*NPTVLEFLLELLCS
Trigger: GGAGCAGAGAAGTTCCAGAAGGAACTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGGTGGTACTGTGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGCTCGACTCCTCTCATaGTTTCCCCGATGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAARLLS*FPRCLV
Trigger: AACCAGACATCGGGGAAACAATGAGAGGAGTCGAGC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAAGAATTTTCAAGCTCCTaGCCTTCACAGTACCACCTT +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQEFSSS*PSQYHL
Trigger: AAGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATTC...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCGATTCATCTCTTCCTaGTTAGGGTCGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFRFISS*LGSPSE
Trigger: CTCAGAAGGCGACCCTAACAAGGAAGAGATGAATCG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLHQMLG*GYCWRN
Trigger: ATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTACTGTGCCGTATTTGTaGCTTGCAGTACATGTGAAG +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPTVPYL*LAVHVK
Trigger: CTTCACATGTACTGCAAGCAACAAATACGGCACAGT...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGCAGCTGTGCAATGCTaGACACTGTGCCGTATTTGT +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFAAVQC*TLCRIC
Trigger: ACAAATACGGCACAGTGTCAAGCATTGCACAGCTGC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTCAATAGCTGCCAGGTaGGTGGTAGAGTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSIAAR*VVELAE
Trigger: CTCAGCCAACTCTACCACCAACCTGGCAGCTATTGA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTCATCTTCAGGCAGGTaGAAGTGCACACGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSSSSGR*KCTRSP
Trigger: TGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAACCGCTGGGGGAGCATaGGAGTTCAAAACAGTCATG +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISATAGGA*EFKTVM
Trigger: CATGACTGTTTTGAACTCCAATGCTCCCCCAGCGGT...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCACCGCTGGGGGAGCATaGGAGTTCAAAACAGTCATG +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSTAGGA*EFKTVM
Trigger: CATGACTGTTTTGAACTCCAATGCTCCCCCAGCGGT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACAGGTCCAGCAGTGTGGGAACTTACTCAACTTCGGTTGCTTGGAAACCACCAATGTCCTCTGAATAGTTaGAGGAGTGCTGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: TGPAVWELTQLRLLGNHQCPLNS*RSAAQS
Trigger: ACTTTGAGCAGCACTCCTCAAACTATTCAGAGGACA...TTGGTGGTTTCCAAGCAACCGAAGTTGAGTAAGTTCCCACACTGCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGTGGTGTTGGTTCTGTaGGGCCTGGTGGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSVVLVL*GLVGVA
Trigger: AGCCACTCCCACCAGGCCCAACAGAACCAACACCAC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGTGACCCGGAAGTGCTaGAGTCTCTTGTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFVTRKC*SLLSKM
Trigger: CATCTTTGACAAGAGACTCAAGCACTTCCGGGTCAC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTCCTTCTCGCCTCATTTaGCAGTGCTCATTTCTCTTA +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPPSRLI*QCSFLL
Trigger: TAAGAGAAATGAGCACTGCAAAATGAGGCGAGAAGG...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGCGAATGGGCAAACTTaGTACCATCAAGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFANGQT*YHQVAR
Trigger: TCTGGCCACTTGATGGTACAAAGTTTGCCCATTCGC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAATGCCGGCTTCATTCTaGGCTGACAACGTGTACCAT +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKMPASF*ADNVYH
Trigger: ATGGTACACGTTGTCAGCCAAGAATGAAGCCGGCAT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTGTCCGCCTTTCTCCTaGGCATTGTTTGGTGAGTTA +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQCPPFS*ALFGEL
Trigger: TAACTCACCAAACAATGCCAAGGAGAAAGGCGGACA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGCAAATCAAAAGTGTTaGCCCGCATACGTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPANQKC*PAYVSC
Trigger: ACAACTCACGTATGCGGGCAAACACTTTTGATTTGC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTTCCCAGGGCAGTGTTaGGACTGGTGTGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSFPGQC*DWCVGG
Trigger: GCCACCCACACACCAGTCCAAACACTGCCCTGGGAA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp CAGGCACTCCACTGCAATGATAATTATCCAGGGAGAACTTTTAGATaGAAGCACAGGAGAAGAGGGAAATTCTTCACGCCCTGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: QALHCNDNYPGRTFR*KHRRRGKFFTPCLR
Trigger: CCTGAGACAGGGCGTGAAGAATTTCCCTCTTCTCCTGTGCTTTCATCTAAAAGTTCTCCCTGGATAATTATCATTGCAGTGGAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540630.5
CDS CCA 90 bp TTGATGGCCAGTCTTGCCAAATTGACACTTTCGTCTAATTCTTCTTaGCTCAGAAAGGCTGAAAGATCTGGAAGGTCATCTTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: LMASLAKLTLSSNSS*LRKAERSGRSSWPP
Trigger: CGGAGGCCAAGATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCAAGAAGAATTAGACGAAAGTGTCAATTTGGCAAGACTGGCCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAATCTGGAAGGTCATCTaGGCCTCCGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTIWKVI*ASASFS
Trigger: GCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGAT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGCCAGTCTTGCCAAATaGACACTTTCGTCTAATTCT +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPASLAK*TLSSNS
Trigger: AGAATTAGACGAAAGTGTCAATTTGGCAAGACTGGC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGATTCCAGTTTACTCTaGTGGTTTTTGCAGGCACGA +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQDSSLL*WFLQAR
Trigger: TCGTGCCTGCAAAAACCACAAGAGTAAACTGGAATC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTACAGTACCACCTTACTaGAGGTGGTGGAATTCCTAC +
Preference number: 5 (lower is better)
Translates to: GVSFCHVGQAGLELLISSTVPPY*RWWNSY
Trigger: GTAGGAATTCCACCACCTCAAGTAAGGTGGTACTGT...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACGATTCATCTCTTCCTaGTTAGGGTCGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISARFISS*LGSPSE
Trigger: CTCAGAAGGCGACCCTAACAAGGAAGAGATGAATCG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCGATTCATCTCTTCCTaGTTAGGGTCGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSRFISS*LGSPSE
Trigger: CTCAGAAGGCGACCCTAACAAGGAAGAGATGAATCG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLHQMLG*GYCWRN
Trigger: ATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGACTGTGCCGTATTTGTaGCTTGCAGTACATGTGAAG +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQTVPYL*LAVHVK
Trigger: CTTCACATGTACTGCAAGCAACAAATACGGCACAGT...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGACACTGTGCCGTATTaGTTGCTTGCAGTACATGTG +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFDTVPY*LLAVHV
Trigger: CACATGTACTGCAAGCAACAAATACGGCACAGTGTC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGCAGCTGTGCAATGCTaGACACTGTGCCGTATTTGT +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSAAVQC*TLCRIC
Trigger: ACAAATACGGCACAGTGTCAAGCATTGCACAGCTGC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACTGGACCGGGGCTCATaGTGGTTCACCAGAACCCCC +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTLDRGS*WFTRTP
Trigger: GGGGGTTCTGGTGAACCACAATGAGCCCCGGTCCAG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGATGCTTCACTTCCTTaGTCATCTTCAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFDASLP*SSSGRL
Trigger: CAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAATTTGTTGCCTGTCCGTaGAACCTCTCCTGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKFVACP*NLSWKE
Trigger: TTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAAA...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCTGCTTACTGGATGTaGTCACCGCTGGGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPAYWM*SPLGEH
Trigger: ATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCCTGCTTACTGGATGTaGTCACCGCTGGGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVPAYWM*SPLGEH
Trigger: ATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGTGTCCTCTGAATAGTTaGAGGAGTGCTGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQCPLNS*RSAAQS
Trigger: ACTTTGAGCAGCACTCCTCAAACTATTCAGAGGACA...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTGGGAGTGGCTCATTTaGGATGGAAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLWEWLI*DGKPSW
Trigger: CCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATCCCTGACCAGCATCTaGTGGGAGGCATCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTSLTSI*WEASGS
Trigger: GCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTCCCTGACCAGCATCTaGTGGGAGGCATCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSSLTSI*WEASGS
Trigger: GCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGCTTTCTTCACCTCTTaGGCTACTACAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAAFFTS*ATTESS
Trigger: GGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAGC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGGCAAATCAAAAGTGTTaGCCCGCATACGTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQANQKC*PAYVSC
Trigger: ACAACTCACGTATGCGGGCAAACACTTTTGATTTGC...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AGGTCACTACTGCCTAGCTCTTCTCAGCCCAGGCATATGGCTCCTAATTGCTCCAATCTCAAGCACATTTaGACACCTTATTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: RSLLPSSSQPRHMAPNCSNLKHI*TPYYVA
Trigger: AGCCACATAATAAGGTGTCAAAATGTGCTTGAGATT...GGAGCAATTAGGAGCCATATGCCTGGGCTGAGAAGAGCTAGGCAGTAGTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp TATACAGAGTGCAACTTACTTGAGGTGGTGGAATTCCTACCACTATaGAATCCAACTGTACTCGAGTTCCTTCTGGAACTTCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: YTECNLLEVVEFLPL*NPTVLEFLLELLCS
Trigger: GGAGCAGAGAAGTTCCAGAAGGAACTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGTTGCACTCTGTATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTAGTGAACCGGGGAGGTaGCCCCAGAGGTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSSEPGR*PQRFFI
Trigger: TATGAAGAACCTCTGGGGCAACCTCCCCGGTTCACT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTGAATTTTCAAGCTCCTaGCCTTCACAGTACCACCTT +
Preference number: 5 (lower is better)
Translates to: GVSFCHVGQAGLELLISSEFSSS*PSQYHL
Trigger: AAGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATTC...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGAGATGACACCTCATTaGGCTTCTGGATTCGATTCA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKEMTPH*ASGFDS
Trigger: TGAATCGAATCCAGAAGCCAAATGAGGTGTCATCTC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTCACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSHQMLG*GYCWRN
Trigger: ATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTG...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGACACTGCTGGATGGTaGCCACACGAGGTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTDTAGW*PHEVGP
Trigger: TGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGTC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGACACTGTGCCGTATTaGTTGCTTGCAGTACATGTG +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISADTVPY*LLAVHV
Trigger: CACATGTACTGCAAGCAACAAATACGGCACAGTGTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGAATCAAGTTTGGGTTaGGCCAGAACTGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTESSLG*ARTGGG
Trigger: GCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATTC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTCCTGGAGATTTGGTTaGCACAGAGGGGTGAGACAC +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLSWRFG*HRGVRH
Trigger: GTGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTGGGAGTGGCTCATTTaGGATGGAAAGCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVWEWLI*DGKPSW
Trigger: CCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGTGGTGTTGGTTCTGTaGGGCCTGGTGGGAGTGGCT +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTVVLVL*GLVGVA
Trigger: AGCCACTCCCACCAGGCCCAACAGAACCAACACCAC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCTCCTGTAGGGGCTCTTaGTCTCTTTCTTGCACTCGG +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLSCRGS*SLSCTR
Trigger: CCGAGTGCAAGAAAGAGACAAAGAGCCCCTACAGGA...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATCCCTGACCAGCATCTaGTGGGAGGCATCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLESLTSI*WEASGS
Trigger: GCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCGAATTCTGCCCGGTTTaGTTGGTAGCGATGCACTTA +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSEFCPV*LVAMHL
Trigger: TAAGTGCATCGCTACCAACAAAACCGGGCAGAATTC...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCAGAATTCTGCCCGGTTTaGTTGGTAGCGATGCACTTA +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAEFCPV*LVAMHL
Trigger: TAAGTGCATCGCTACCAACAAAACCGGGCAGAATTC...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAATGCCGGCTTCATTCTaGGCTGACAACGTGTACCAT +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLMPASF*ADNVYH
Trigger: ATGGTACACGTTGTCAGCCAAGAATGAAGCCGGCAT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ACTCAACTTCGGTTGCTTGGAAACCACCAAGTCTGGCTTGTTCTCATTCCCCCTGAGGCAGGGTTTGAATaGGTGATTAGAATAAAGATG +
Preference number: 5 (lower is better)
Translates to: TQLRLLGNHQVWLVLIPPEAGFE*VIRIKM
Trigger: CATCTTTATTCTAATCACCAATTCAAACCCTGCCTC...AGGGGGAATGAGAACAAGCCAGACTTGGTGGTTTCCAAGCAACCGAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 90 bp CATCACTCTCCACTACACTCCGAGAAGAGCATGAATACACCATCGTaGTTTCCATGGAGGAAAAGGCAGAAAATATGTCAAGTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: HHSPLHSEKSMNTPS*FPWRKRQKICQVLY
Trigger: GTAAAGGACTTGACATATTTTCTGCCTTTTCCTCCATGGAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGTGTAGTGGAGAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGCCAGTCTTGCCAAATaGACACTTTCGTCTAATTCT +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFASLAK*TLSSNS
Trigger: AGAATTAGACGAAAGTGTCAATTTGGCAAGACTGGC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GGGGTTTCATTTTGTCATGTAGGCCAGGCTGGTCTTGAACTTCTGATCTCAAGTGCCAGTCTTGCCAAATaGACACTTTCGTCTAATTCT +
Preference number: 5 (lower is better)
Translates to: GVSFCHVGQAGLELLISSASLAK*TLSSNS
Trigger: AGAATTAGACGAAAGTGTCAATTTGGCAAGACTGGC...ACTTGAGATCAGAAGTTCAAGACCAGCCTGGCCTACATGACAAAATGAAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373675.3
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAAAGTCGTTTTCTAGCTaGAGTTTCATCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKKSFSS*SFICLL
Trigger: GAGAAGGCAGATGAAACTCAAGCTAGAAAACGACTT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCACTGTGCCGTATTTGTaGCTTGCAGTACATGTGAAG +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSTVPYL*LAVHVK
Trigger: CTTCACATGTACTGCAAGCAACAAATACGGCACAGT...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAGATGCTTCACTTCCTTaGTCATCTTCAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLDASLP*SSSGRL
Trigger: CAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATC...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACACCTGCTTACTGGATGTaGTCACCGCTGGGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTPAYWM*SPLGEH
Trigger: ATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGG...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCTGTCCTCTGAATAGTTaGAGGAGTGCTGCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSCPLNS*RSAAQS
Trigger: ACTTTGAGCAGCACTCCTCAAACTATTCAGAGGACA...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTCCTGGAGATTTGGTTaGCACAGAGGGGTGAGACAC +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSSWRFG*HRGVRH
Trigger: GTGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TCTCACATCTCTGTTGGAATCTTTAGAAGGCACAGCCCTACCTTTCTCCCTCAGCTGGTTGAGGAGACTTaGTATTTTTCTTCGCTAATC +
Preference number: 5 (lower is better)
Translates to: SHISVGIFRRHSPTFLPQLVEET*YFSSLI
Trigger: GATTAGCGAAGAAAAATACAAAGTCTCCTCAACCAG...CTGAGGGAGAAAGGTAGGGCTGTGCCTTCTAAAGATTCCAACAGAGATGTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAATGGGAGCAATACACTaGCCCGTGGGGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTMGAIH*PVGISS
Trigger: TGATGAGATCCCCACGGGCAAGTGTATTGCTCCCAT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAAAGTGCTTGAGTCTCTaGTCAAAGATGGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKKCLSL*SKMGAI
Trigger: TATTGCTCCCATCTTTGACAAGAGACTCAAGCACTT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGGTATCCCAACAATTTaGCAGGTGAATGTAACTGGA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKGIPTI*QVNVTG
Trigger: TCCAGTTACATTCACCTGCAAAATTGTTGGGATACC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTGGTATCCCAACAATTTaGCAGGTGAATGTAACTGGA +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFGIPTI*QVNVTG
Trigger: TCCAGTTACATTCACCTGCAAAATTGTTGGGATACC...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCGCGAATGGGCAAACTTaGTACCATCAAGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLANGQT*YHQVAR
Trigger: TCTGGCCACTTGATGGTACAAAGTTTGCCCATTCGC...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATCCTGTAGGGGCTCTTaGTCTCTTTCTTGCACTCGG +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTSCRGS*SLSCTR
Trigger: CCGAGTGCAAGAAAGAGACAAAGAGCCCCTACAGGA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTCCTGTAGGGGCTCTTaGTCTCTTTCTTGCACTCGG +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVSCRGS*SLSCTR
Trigger: CCGAGTGCAAGAAAGAGACAAAGAGCCCCTACAGGA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCATGCCGGCTTCATTCTaGGCTGACAACGTGTACCAT +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLMPASF*ADNVYH
Trigger: ATGGTACACGTTGTCAGCCAAGAATGAAGCCGGCAT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGCACTCTTTCCTTTCTCCTTGGCATaGTTTGGTGAGTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: LPQLRLQESLADLFKALFPFSLA*FGELVI
Trigger: TATGACTAACTCACCAAACAATGCCAAGGAGAAAGG...AAAGAGTGCTTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAACCTTTCTCCTTGGCATaGTTTGGTGAGTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKPFSLA*FGELVI
Trigger: TATGACTAACTCACCAAACAATGCCAAGGAGAAAGG...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAACGCACAAGGATGGCTaGCCAGATCTGCTCATTTGG +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTTHKDG*PDLLIW
Trigger: CCAAATGAGCAGATCTGGCAAGCCATCCTTGTGCGT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS TCA 90 bp CAGGCACTCCACTGCAATGATAATTATCCAGGGAGAACTTTTAGATaGAAGCACAGGAGAAGAGGGAAATTCTTCACGCCCTTGGAAATA +
Preference number: 5 (lower is better)
Translates to: QALHCNDNYPGRTFR*KHRRRGKFFTPLEI
Trigger: TATTTCCAAGGGCGTGAAGAATTTCCCTCTTCTCCTGTGCTTTCATCTAAAAGTTCTCCCTGGATAATTATCATTGCAGTGGAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAAGTGAACCGGGGAGGTaGCCCCAGAGGTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTSEPGR*PQRFFI
Trigger: TATGAAGAACCTCTGGGGCAACCTCCCCGGTTCACT...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATCATCTTCAGGCAGGTaGAAGTGCACACGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLESSSGR*KCTRSP
Trigger: TGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGAATCAAGTTTGGGTTaGGCCAGAACTGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTESSLG*ARTGGG
Trigger: GCCCCCTCCAGTTCTGGCCAAACCCAAACTTGATTC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAAGCACAGGTTGGCCATaGAGTAGCCATGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTSTGWP*SSHVSS
Trigger: GGAGCTGACATGGCTACTCAATGGCCAACCTGTGCT...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGCTTTCTTCACCTCTTaGGCTACTACAGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVAFFTS*ATTESS
Trigger: GGAGCTCTCTGTAGTAGCCAAAGAGGTGAAGAAAGC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTATGCCGGCTTCATTCTaGGCTGACAACGTGTACCAT +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVMPASF*ADNVYH
Trigger: ATGGTACACGTTGTCAGCCAAGAATGAAGCCGGCAT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCACCTTTCTCCTTGGCATaGTTTGGTGAGTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAPFSLA*FGELVI
Trigger: TATGACTAACTCACCAAACAATGCCAAGGAGAAAGG...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAGAGGCAGGGTTTGAATaGGTGATTAGAATAAAGATG +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKEAGFE*VIRIKM
Trigger: CATCTTTATTCTAATCACCAATTCAAACCCTGCCTC...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GAAAATAGTGCAGACAAGCTGGTAAGGCCATGCTTTGGCCACAAAATAAGTGCATTCTATGCTGTCGTCTaGCATGCTTTGGACATGTTT +
Preference number: 5 (lower is better)
Translates to: ENSADKLVRPCFGHKISAFYAVV*HALDMF
Trigger: AAACATGTCCAAAGCATGCAAGACGACAGCATAGAA...TGCACTTATTTTGTGGCCAAAGCATGGCCTTACCAGCTTGTCTGCACTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS GCA 90 bp TTTCATCTGATCAGGAGAAAGTCGTTTTCTAGCTTGAGTTTCATCTaGCTTCTCCAAAGGGTCGTAATTGATGGCCAGTCTTGCCAAATT +
Preference number: 5 (lower is better)
Translates to: FHLIRRKSFSSLSFI*LLQRVVIDGQSCQI
Trigger: AATTTGGCAAGACTGGCCATCAATTACGACCCTTTGGAGAAGGCAGATGAAACTCAAGCTAGAAAACGACTTTCTCCTGATCAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCAAATTCTTCACGCCCTaGGAAATAGAGAGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLKFFTP*EIESSR
Trigger: ACGGCTACTCTCTATTTCCAAGGGCGTGAAGAATTT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAAAGTCGTTTTCTAGCTaGAGTTTCATCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLKSFSS*SFICLL
Trigger: GAGAAGGCAGATGAAACTCAAGCTAGAAAACGACTT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAACAGTACCACCTTACTaGAGGTGGTGGAATTCCTAC +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTTVPPY*RWWNSY
Trigger: GTAGGAATTCCACCACCTCAAGTAAGGTGGTACTGT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAGACACTGTGCCGTATTaGTTGCTTGCAGTACATGTG +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTDTVPY*LLAVHV
Trigger: CACATGTACTGCAAGCAACAAATACGGCACAGTGTC...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACATCATCTTCAGGCAGGTaGAAGTGCACACGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTSSSGR*KCTRSP
Trigger: TGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGA...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACATTTGTTGCCTGTCCGTaGAACCTCTCCTGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTFVACP*NLSWKE
Trigger: TTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAAA...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTGTTGCCTGTCCGTaGAACCTCTCCTGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTFVACP*NLSWKE
Trigger: TTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAAA...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp ATATGCAAATCAAAAGTGTTTGCCCGCATACGTGAGTTGTATGGCATGACCTCCCTGGTTGAGGAGACTTaGTATTTTTCTTCGCTAATC +
Preference number: 5 (lower is better)
Translates to: ICKSKVFARIRELYGMTSLVEET*YFSSLI
Trigger: GATTAGCGAAGAAAAATACAAAGTCTCCTCAACCAG...GGAGGTCATGCCATACAACTCACGTATGCGGGCAAACACTTTTGATTTGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTAAAGTGCTTGAGTCTCTaGTCAAAGATGGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLKCLSL*SKMGAI
Trigger: TATTGCTCCCATCTTTGACAAGAGACTCAAGCACTT...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGTGACCCGGAAGTGCTaGAGTCTCTTGTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEVTRKC*SLLSKM
Trigger: CATCTTTGACAAGAGACTCAAGCACTTCCGGGTCAC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGAATTCTGCCCGGTTTaGTTGGTAGCGATGCACTTA +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVEFCPV*LVAMHL
Trigger: TAAGTGCATCGCTACCAACAAAACCGGGCAGAATTC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGTTTGGACTGGTGTGTGGGTGGCATATTCCTGCAGAATATAAGATTAGGTTACCTTTCTCCTTGGCATaGTTTGGTGAGTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: VFGLVCGWHIPAEYKIRLPFSLA*FGELVI
Trigger: TATGACTAACTCACCAAACAATGCCAAGGAGAAAGG...TAACCTAATCTTATATTCTGCAGGAATATGCCACCCACACACCAGTCCAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTTGTCCGCCTTTCTCCTaGGCATTGTTTGGTGAGTTA +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSCPPFS*ALFGEL
Trigger: TAACTCACCAAACAATGCCAAGGAGAAAGGCGGACA...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTTGTCCGCCTTTCTCCTaGGCATTGTTTGGTGAGTTA +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVCPPFS*ALFGEL
Trigger: TAACTCACCAAACAATGCCAAGGAGAAAGGCGGACA...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp CCTACCTTTCTCCCTCAGCTGAGACTGCAAGAATCCCTAGCTGACTTATTCAAAAATCTCAAGCACATTTaGACACCTTATTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: PTFLPQLRLQESLADLFKNLKHI*TPYYVA
Trigger: AGCCACATAATAAGGTGTCAAAATGTGCTTGAGATT...TTTGAATAAGTCAGCTAGGGATTCTTGCAGTCTCAGCTGAGGGAGAAAGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp TTAGGAGATGGAGCTCCTTTTACTCTGCATTCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAATTTTGTAGCATCTTTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: LGDGAPFTLHSKTTS*PSEADKFCSIFVNT
Trigger: TGTGTTTACAAAGATGCTACAAAATTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGAATGCAGAGTAAAAGGAGCTCCATCTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS TCA 90 bp ACATTCTTAAAGTTCATCACTCTCCACTACACTCCGAGAAGAGCATaGATACACCATCGTGCTTTCCATGGAGGAAAAGGCAGAAAATAT +
Preference number: 5 (lower is better)
Translates to: TFLKFITLHYTPRRA*IHHRAFHGGKGRKY
Trigger: ATATTTTCTGCCTTTTCCTCCATGGAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGTGTAGTGGAGAGTGATGAACTTTAAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAAAATTCTTCACGCCCTaGGAAATAGAGAGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTKFFTP*EIESSR
Trigger: ACGGCTACTCTCTATTTCCAAGGGCGTGAAGAATTT...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGAGATGACACCTCATTaGGCTTCTGGATTCGATTCA +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTEMTPH*ASGFDS
Trigger: TGAATCGAATCCAGAAGCCAAATGAGGTGTCATCTC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTCCTTCTCGCCTCATTTaGCAGTGCTCATTTCTCTTA +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVPSRLI*QCSFLL
Trigger: TAAGAGAAATGAGCACTGCAAAATGAGGCGAGAAGG...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACCTTCTCGCCTCATTTaGCAGTGCTCATTTCTCTTA +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTPSRLI*QCSFLL
Trigger: TAAGAGAAATGAGCACTGCAAAATGAGGCGAGAAGG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAATGTCCGCCTTTCTCCTaGGCATTGTTTGGTGAGTTA +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLECPPFS*ALFGEL
Trigger: TAACTCACCAAACAATGCCAAGGAGAAAGGCGGACA...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAAGAGGAAGTCTTCACTaGGACGGTAAGCATGGGAGA +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTRGSLH*DGKHGR
Trigger: TCTCCCATGCTTACCGTCCAAGTGAAGACTTCCTCT...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354393.6
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAACAGAGTGCAACTTACTaGAGGTGGTGGAATTCCTAC +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEQSATY*RWWNSY
Trigger: GTAGGAATTCCACCACCTCAAGTAAGTTGCACTCTG...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACACTGTCAGAAGTGTTTTaGTCCTTACTCAGATGGCCA +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTLSEVF*SLLRWP
Trigger: TGGCCATCTGAGTAAGGACAAAAACACTTCTGACAG...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACAGAATTTTCAAGCTCCTaGCCTTCACAGTACCACCAA +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTEFSSS*PSQYHQ
Trigger: TTGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATTC...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGAATTTTCAAGCTCCTaGCCTTCACAGTACCACCTT +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEEFSSS*PSQYHL
Trigger: AAGGTGGTACTGTGAAGGCAAGGAGCTTGAAAATTC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358913.10
ENST00000540630.5
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGAGATGACACCTCATTaGGCTTCTGGATTCGATTCA +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEEMTPH*ASGFDS
Trigger: TGAATCGAATCCAGAAGCCAAATGAGGTGTCATCTC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGACACTGTGCCGTATTaGTTGCTTGCAGTACATGTG +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTDTVPY*LLAVHV
Trigger: CACATGTACTGCAAGCAACAAATACGGCACAGTGTC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGATGCTTCACTTCCTTaGTCATCTTCAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTDASLP*SSSGRL
Trigger: CAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCCTGGTTGAGGAGACTTaGTATTTTTCTTCGCTAATC +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLLVEET*YFSSLI
Trigger: GATTAGCGAAGAAAAATACAAAGTCTCCTCAACCAG...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTAAGTGCTTGAGTCTCTaGTCAAAGATGGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVKCLSL*SKMGAI
Trigger: TATTGCTCCCATCTTTGACAAGAGACTCAAGCACTT...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGTATCCCAACAATTTaGCAGGTGAATGTAACTGGA +
Preference number: 5 (lower is better)
Translates to: WQLCDIFGSSVLSSHISVGIPTI*QVNVTG
Trigger: TCCAGTTACATTCACCTGCAAAATTGTTGGGATACC...AACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGCAAATCAAAAGTGTTaGCCCGCATACGTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEANQKC*PAYVSC
Trigger: ACAACTCACGTATGCGGGCAAACACTTTTGATTTGC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGCCAGTCTTGCCAAATaGACACTTTCGTCTAATTCT +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEASLAK*TLSSNS
Trigger: AGAATTAGACGAAAGTGTCAATTTGGCAAGACTGGC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACATTTTGACAGATTCCAGTTTACTCTaGTGGTTTTTGCAGGCACGA +
Preference number: 5 (lower is better)
Translates to: CAISSVSASFWNLKHILTDSSLL*WFLQAR
Trigger: TCGTGCCTGCAAAAACCACAAGAGTAAACTGGAATC...TGTCAAAATGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAGTGCACTGTGCAATATCAAGTGTTTCAGCAAGTTTTTGGAATCTCAAGCACACTGGTTGAGGAGACTTaGTATTTTTCTTCGCTAATC +
Preference number: 5 (lower is better)
Translates to: KCTVQYQVFQQVFGISSTLVEET*YFSSLI
Trigger: GATTAGCGAAGAAAAATACAAAGTCTCCTCAACCAG...TGTGCTTGAGATTCCAAAAACTTGCTGAAACACTTGATATTGCACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAAAGTGCTTGAGTCTCTaGTCAAAGATGGGAGCAATA +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEKCLSL*SKMGAI
Trigger: TATTGCTCCCATCTTTGACAAGAGACTCAAGCACTT...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AAAGCAGTGGATGGCAACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCAATCTCAAGCACATTTaGACACCTTATTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: KAVDGNCVTSLVHLYYLLNLKHI*TPYYVA
Trigger: AGCCACATAATAAGGTGTCAAAATGTGCTTGAGATT...GAGAAGATAATACAGATGAACCAAAGATGTCACACAGTTGCCATCCACTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTGAGGCAGGGTTTGAATaGGTGATTAGAATAAAGATG +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSEAGFE*VIRIKM
Trigger: CATCTTTATTCTAATCACCAATTCAAACCCTGCCTC...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp TACTTTGTGCTAGGTACTCTTCTAGGTACTAGGGATATCACAGTGAACTTAAGTAACATCTATGAGCAATaGGATAGCCAGAAGGAGATA +
Preference number: 5 (lower is better)
Translates to: YFVLGTLLGTRDITVNLSNIYEQ*DSQKEI
Trigger: TATCTCCTTCTGGCTATCCAATTGCTCATAGATGTT...ACTTAAGTTCACTGTGATATCCCTAGTACCTAGAAGAGTACCTAGCACAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS-3UTR CAA 90 bp GTGAAGACAGTTTCAAGCCTTTCTAAGCAGTTACTGTCTGTTCACACAAATACAAATCTCAAGCACATTTaGACACCTTATTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: VKTVSSLSKQLLSVHTNTNLKHI*TPYYVA
Trigger: AGCCACATAATAAGGTGTCAAAATGTGCTTGAGATT...TGTATTTGTGTGAACAGACAGTAACTGCTTAGAAAGGCTTGAAACTGTCTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS-3UTR CAA 90 bp AACTGTGTGACATCTTTGGTTCATCTGTATTATCTTCTCACATCTCTGTTGGAAGAGGCAGGGTTTGAATaGGTGATTAGAATAAAGATG +
Preference number: 5 (lower is better)
Translates to: NCVTSLVHLYYLLTSLLEEAGFE*VIRIKM
Trigger: CATCTTTATTCTAATCACCAATTCAAACCCTGCCTC...TTCCAACAGAGATGTGAGAAGATAATACAGATGAACCAAAGATGTCACACAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CCGCCTCCTTCAGCGGCCCCAGAAGGACTGCCGAAATaGCAAGGGTTGGAGGAGGGCTCCGCTCGACTCCTC +
Preference number: 6 (lower is better)
Translates to: PPPSAAPEGLPK*QGLEEGSARLL
Trigger: GAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTGAAGGAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp GGTGTAGTGTCTCCACCAGCCGCCTCACTGGCAGCCTaGTCCGCTTCACGCCTCTTGGCTTCCTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: GVVSPPAASLAA*SASRLLASCCS
Trigger: GGAACAGCAGGAAGCCAAGAGGCGTGAAGCGGAGCAGGCTGCCAGTGAGGCGGCTGGTGGAGACACTACACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp CCGCCTCCTTCAGCGGCCCCAGAAGGACTGCCGAAATGGCAAGGGTaGGAGGAGGGCTCCGCTCGACTCCTCTCATTGTTTCCCCGATGT +
Preference number: 6 (lower is better)
Translates to: PPPSAAPEGLPKWQG*EEGSARLLSLFPRC
Trigger: ACATCGGGGAAACAATGAGAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTGAAGGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp GGGGCTCTGACACTGCTGGATGGTTGCCACACGAGGTaGGGCCACCAAATGCTGGGCTTGGGGTACTGCTGG +
Preference number: 6 (lower is better)
Translates to: GALTLLDGCHTR*GHQMLGLGYCW
Trigger: CCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACCATCCAGCAGTGTCAGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CAGCGGCCCCAGAAGGACTGCCGAAATGGCAAGGGTTaGAGGAGGGCTCCGCTCGACTCCTCTCATTGTTTC +
Preference number: 6 (lower is better)
Translates to: QRPQKDCRNGKG*RRAPLDSSHCF
Trigger: GAAACAATGAGAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GGCATGCCTATCACGCGGCACTCCAGTCTCACGGGGTaGCCTTCGGGAACACCGCAGTTCTGTAGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: GMPITRHSSLTG*PSGTPQFCSFS
Trigger: GGAGAAACTACAGAACTGCGGTGTTCCCGAAGGCCACCCCGTGAGACTGGAGTGCCGCGTGATAGGCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GAGATCCGTAGCGACTGCCACTGGGCCGGACAGACATaGGCGGTGGGATCTGATGGTGCCACTGAGCGTATA +
Preference number: 6 (lower is better)
Translates to: EIRSDCHWAGQT*AVGSDGATERI
Trigger: TATACGCTCAGTGGCACCATCAGATCCCACCGCCCATGTCTGTCCGGCCCAGTGGCAGTCGCTACGGATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp ACCAGCATCTTGTGGGAGGCATCTGGTAGCACAGGTTaGCCATTGAGTAGCCATGTCAGCTCCGGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: TSILWEASGSTG*PLSSHVSSGGG
Trigger: ACCGCCCCCGGAGCTGACATGGCTACTCAATGGCCAACCTGTGCTACCAGATGCCTCCCACAAGATGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GTAGCGACTGCCACTGGGCCGGACAGACATGGGCGGTaGGATCTGATGGTGCCACTGAGCGTATATATCCAG +
Preference number: 6 (lower is better)
Translates to: VATATGPDRHGR*DLMVPLSVYIQ
Trigger: CTGGATATATACGCTCAGTGGCACCATCAGATCCCACCGCCCATGTCTGTCCGGCCCAGTGGCAGTCGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp TCAGCGGCCCCAGAAGGACTGCCGAAATGGCAAGGGTaGGAGGAGGGCTCCGCTCGACTCCTCTCATTGTTT +
Preference number: 6 (lower is better)
Translates to: SAAPEGLPKWQG*EEGSARLLSLF
Trigger: AAACAATGAGAGGAGTCGAGCGGAGCCCTCCTCCAACCCTTGCCATTTCGGCAGTCCTTCTGGGGCCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp CTGCTGGATGGTTGCCACACGAGGTTGGGCCACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAATGACTGCAGAGGTAGTGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: LLDGCHTRLGHQMLG*GYCWRNDCRGSGRR
Trigger: TCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACCATCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp CTCACCTTACAGTCCAGCCGACAGAGGCGCCCCTCATaGGCTACCATATCCCCAGGAGCCTGCAGGAAATGT +
Preference number: 6 (lower is better)
Translates to: LTLQSSRQRRPS*ATISPGACRKC
Trigger: ACATTTCCTGCAGGCTCCTGGGGATATGGTAGCTCATGAGGGGCGCCTCTGTCGGCTGGACTGTAAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp ACGAGGTTGGGCCACCAAATGCTGGGCTTGGGGTACTaGTGGAGGAATGACTGCAGAGGTAGTGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: TRLGHQMLGLGY*WRNDCRGSGRR
Trigger: TCTCCTCCCACTACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp TGCTGGATGGTTGCCACACGAGGTTGGGCCACCAAATaGTGGGCTTGGGGTACTGCTGGAGGAATGACTGCA +
Preference number: 6 (lower is better)
Translates to: CWMVATRGWATK*WAWGTAGGMTA
Trigger: TGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACCATCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp CATTGTCTTTCTTCCAGTAGAACACAGGTGGGGGCATaGCTATCACGCGGCACTCCAGTCTCACGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: HCLSSSRTQVGA*LSRGTPVSRGG
Trigger: GCCACCCCGTGAGACTGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGGAAGAAAGACAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TGGCTCAGAAAGGCTGAAAGATCTGGAAGGTCATCTTaGCCTCCGCCTCCTTCAGCGGCCCCAGAAGGACTG +
Preference number: 6 (lower is better)
Translates to: WLRKAERSGRSS*PPPPSAAPEGL
Trigger: CAGTCCTTCTGGGGCCGCTGAAGGAGGCGGAGGCCAAGATGACCTTCCAGATCTTTCAGCCTTTCTGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GTTGCCACACGAGGTTGGGCCACCAAATGCTGGGCTTaGGGTACTGCTGGAGGAATGACTGCAGAGGTAGTG +
Preference number: 6 (lower is better)
Translates to: VATRGWATKCWA*GTAGGMTAEVV
Trigger: CACTACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TGGATGGTTGCCACACGAGGTTGGGCCACCAAATGCTaGGCTTGGGGTACTGCTGGAGGAATGACTGCAGAG +
Preference number: 6 (lower is better)
Translates to: WMVATRGWATKC*AWGTAGGMTAE
Trigger: CTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp ACCTCTCCTGGAAAGAATCGGGCCTGGTCTGTCTGGTaGTCACCACACCAGCCTCGGAGGATGCTTCACTTC +
Preference number: 6 (lower is better)
Translates to: TSPGKNRAWSVW*SPHQPRRMLHF
Trigger: GAAGTGAAGCATCCTCCGAGGCTGGTGTGGTGACCACCAGACAGACCAGGCCCGATTCTTTCCAGGAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp GGTTGCCACACGAGGTTGGGCCACCAAATGCTGGGCTaGGGGTACTGCTGGAGGAATGACTGCAGAGGTAGT +
Preference number: 6 (lower is better)
Translates to: GCHTRLGHQMLG*GYCWRNDCRGS
Trigger: ACTACCTCTGCAGTCATTCCTCCAGCAGTACCCCAAGCCCAGCATTTGGTGGCCCAACCTCGTGTGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp AGCAGAGAGTGGACTCCGGTCTCCCTGACCAGCATCTaGTGGGAGGCATCTGGTAGCACAGGTTGGCCATTG +
Preference number: 6 (lower is better)
Translates to: SREWTPVSLTSI*WEASGSTGWPL
Trigger: CAATGGCCAACCTGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGAGACCGGAGTCCACTCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp CTGACCAGCATCTTGTGGGAGGCATCTGGTAGCACAGGTTGGCCATaGAGTAGCCATGTCAGCTCCGGGGGCGGTAAACCACTCACCTTA +
Preference number: 6 (lower is better)
Translates to: LTSILWEASGSTGWP*SSHVSSGGGKPLTL
Trigger: TAAGGTGAGTGGTTTACCGCCCCCGGAGCTGACATGGCTACTCAATGGCCAACCTGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp GGGTCAATGAGCAGAGAGTGGACTCCGGTCTCCCTGACCAGCATCTaGTGGGAGGCATCTGGTAGCACAGGTTGGCCATTGAGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: GSMSREWTPVSLTSI*WEASGSTGWPLSSH
Trigger: ATGGCTACTCAATGGCCAACCTGTGCTACCAGATGCCTCCCACAAGATGCTGGTCAGGGAGACCGGAGTCCACTCTCTGCTCATTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp GCTTCACTTCCTTTGTCATCTTCAGGCAGGTTGAAGTaGACACGAAGCCCAATCCTGGAGCTGGACCGGGGC +
Preference number: 6 (lower is better)
Translates to: ASLPLSSSGRLK*TRSPILELDRG
Trigger: GCCCCGGTCCAGCTCCAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGACAAAGGAAGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CATTGTGGTTCACCAGAACCCCCTCGAGTTTGGGTTTaGGGGGTTGTTCCACAGATGGAGGCTCTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: HCGSPEPPRVWV*GVVPQMEALSG
Trigger: CCCACTCAGAGCCTCCATCTGTGGAACAACCCCCCAAACCCAAACTCGAGGGGGTTCTGGTGAACCACAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CTGGTTTCCGCTGGGGATGGAAAATGTGAATGGTGGTaGTGTTGGTTCTGTTGGGCCTGGTGGGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: LVSAGDGKCEWW*CWFCWAWWEWL
Trigger: GAGCCACTCCCACCAGGCCCAACAGAACCAACACCACCACCATTCACATTTTCCATCCCCAGCGGAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TGGGTTCTGAATCCGGCTGGTAGGAGAGACAGGAATTaGGGACACACAGCGGGGCTGAAACTGGTTTCCGCT +
Preference number: 6 (lower is better)
Translates to: WVLNPAGRRDRN*GHTAGLKLVSA
Trigger: AGCGGAAACCAGTTTCAGCCCCGCTGTGTGTCCCCAATTCCTGTCTCTCCTACCAGCCGGATTCAGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp ATCTTGTGGGAGGCATCTGGTAGCACAGGTTGGCCATaGAGTAGCCATGTCAGCTCCGGGGGCGGTAAACCA +
Preference number: 6 (lower is better)
Translates to: ILWEASGSTGWP*SSHVSSGGGKP
Trigger: TGGTTTACCGCCCCCGGAGCTGACATGGCTACTCAATGGCCAACCTGTGCTACCAGATGCCTCCCACAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp GGGAGGTTGCCCCAGAGGTTCTTCATAGTACAGAGATaGAGGGGAAGACCCTGGTGTAGTGTCTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: GRLPQRFFIVQR*RGRPWCSVSTS
Trigger: GCTGGTGGAGACACTACACCAGGGTCTTCCCCTTCATCTCTGTACTATGAAGAACCTCTGGGGCAACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp TCGTGGAGGGGAAGAAATACTTCGGCCGGGCCAAGCTaGACGTCTGTGATGAAGGAGCCTTCACCTGCTTAC +
Preference number: 6 (lower is better)
Translates to: SWRGRNTSAGPS*TSVMKEPSPAY
Trigger: GTAAGCAGGTGAAGGCTCCTTCATCACAGACGTTCAGCTTGGCCCGGCCGAAGTATTTCTTCCCCTCCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp GCCAAGCTGAACGTCTGTGATGAAGGAGCCTTCACCTaGTTACTGGATGTTGTCACCGCTGGGGGAGCATTG +
Preference number: 6 (lower is better)
Translates to: AKLNVCDEGAFT*LLDVVTAGGAL
Trigger: CAATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGGCTCCTTCATCACAGACGTTCAGCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp CCCGGTTTTGTTGGTAGCGATGCACTTATAGGTCCCTaGGTCGCGCTGAGTGAGTGGGTCAATGAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: PGFVGSDALIGP*VALSEWVNEQR
Trigger: TCTCTGCTCATTGACCCACTCACTCAGCGCGACGCAGGGACCTATAAGTGCATCGCTACCAACAAAACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TCTGGGGTTTTTGTTGCCTGTCCGTTGAACCTCTCCTaGAAAGAATCGGGCCTGGTCTGTCTGGTGGTCACC +
Preference number: 6 (lower is better)
Translates to: SGVFVACPLNLS*KESGLVCLVVT
Trigger: GGTGACCACCAGACAGACCAGGCCCGATTCTTTCCAGGAGAGGTTCAACGGACAGGCAACAAAAACCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TGTGAATGGTGGTGGTGTTGGTTCTGTTGGGCCTGGTaGGAGTGGCTCATTTTGGATGGAAAGCCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: CEWWWCWFCWAW*EWLILDGKPSW
Trigger: CCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAACCAACACCACCACCATTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp GGAGAGCCTTCTGTGACCCGGAAGTGCTTGAGTCTCTaGTCAAAGATGGGAGCAATACACTTGCCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: GEPSVTRKCLSL*SKMGAIHLPVG
Trigger: CCCCACGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGAAGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp TGTCTGGTGGTCACCACACCAGCCTCGGAGGATGCTTCACTTCCTTaGTCATCTTCAGGCAGGTTGAAGTGCACACGAAGCCCAATCCTG +
Preference number: 6 (lower is better)
Translates to: CLVVTTPASEDASLP*SSSGRLKCTRSPIL
Trigger: CAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGTGTGGTGACCACCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp GCTTCACGCCTCTTGGCTTCCTGCTGTTCCAGGGCGTaGTTCACTTCATTATCCCTGGTATCCGCAGGGATA +
Preference number: 6 (lower is better)
Translates to: ASRLLASCCSRA*FTSLSLVSAGI
Trigger: TATCCCTGCGGATACCAGGGATAATGAAGTGAATCACGCCCTGGAACAGCAGGAAGCCAAGAGGCGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp GGTCTGTCTGGTGGTCACCACACCAGCCTCGGAGGATaGTTCACTTCCTTTGTCATCTTCAGGCAGGTTGAA +
Preference number: 6 (lower is better)
Translates to: GLSGGHHTSLGG*FTSFVIFRQVE
Trigger: TTCAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATCCTCCGAGGCTGGTGTGGTGACCACCAGACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TGGTGGTGGTGTTGGTTCTGTTGGGCCTGGTGGGAGTaGCTCATTTTGGATGGAAAGCCCTCCTGGAGATTT +
Preference number: 6 (lower is better)
Translates to: WWWCWFCWAWWE*LILDGKPSWRF
Trigger: AAATCTCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAACCAACACCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CTGAAACTGGTTTCCGCTGGGGATGGAAAATGTGAATaGTGGTGGTGTTGGTTCTGTTGGGCCTGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: LKLVSAGDGKCE*WWCWFCWAWWE
Trigger: CTCCCACCAGGCCCAACAGAACCAACACCACCACCATTCACATTTTCCATCCCCAGCGGAAACCAGTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GATGGTCTCATTGTCTTTCTTCCAGTAGAACACAGGTaGGGGCATGCCTATCACGCGGCACTCCAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: DGLIVFLPVEHR*GHAYHAALQSH
Trigger: GTGAGACTGGAGTGCCGCGTGATAGGCATGCCCCCACCTGTGTTCTACTGGAAGAAAGACAATGAGACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp GATGGCCTCAGCAGGCCTTTCACGCACAAGGATGGCTaGCCAGATCTGCTCATTTGGCTAGCTAGCAAGCAT +
Preference number: 6 (lower is better)
Translates to: DGLSRPFTHKDG*PDLLIWLASKH
Trigger: ATGCTTGCTAGCTAGCCAAATGAGCAGATCTGGCAAGCCATCCTTGTGCGTGAAAGGCCTGCTGAGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS TCA 72 bp TGGCTCAATAGCTGCCAGGTTGGTGGTAGAGTTGGCTaGGTGAAGAGACCCGTTGTTGCTGAGGTCCTCATT +
Preference number: 6 (lower is better)
Translates to: WLNSCQVGGRVG*VKRPVVAEVLI
Trigger: AATGAGGACCTCAGCAACAACGGGTCTCTTCACTCAGCCAACTCTACCACCAACCTGGCAGCTATTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp AACGTGTACCATCCAGCGTCTGATTTCTTGGCTGGCTaGATGAGAAGGCAGGCATACCCTGTTGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: NVYHPASDFLAG*MRRQAYPVVSW
Trigger: CCAGGACACAACAGGGTATGCCTGCCTTCTCATTCAGCCAGCCAAGAAATCAGACGCTGGATGGTACACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GTTGGTTCTGTTGGGCCTGGTGGGAGTGGCTCATTTTaGATGGAAAGCCCTCCTGGAGATTTGGTTTGCACA +
Preference number: 6 (lower is better)
Translates to: VGSVGPGGSGSF*MESPPGDLVCT
Trigger: TGTGCAAACCAAATCTCCAGGAGGGCTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp AAATGTGAATGGTGGTGGTGTTGGTTCTGTTGGGCCTaGTGGGAGTGGCTCATTTTGGATGGAAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: KCEWWWCWFCWA*WEWLILDGKPS
Trigger: GGAGGGCTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAACCAACACCACCACCATTCACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp TGTGAGACTGACCAGCAGAGGTTAGCCGACTGCGAATaGGCAAACTTTGTACCATCAAGTGGCCAGAACAGC +
Preference number: 6 (lower is better)
Translates to: CETDQQRLADCE*ANFVPSSGQNS
Trigger: GCTGTTCTGGCCACTTGATGGTACAAAGTTTGCCCATTCGCAGTCGGCTAACCTCTGCTGGTCAGTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp GAGGATGCTTCACTTCCTTTGTCATCTTCAGGCAGGTaGAAGTGCACACGAAGCCCAATCCTGGAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: EDASLPLSSSGR*KCTRSPILELD
Trigger: GTCCAGCTCCAGGATTGGGCTTCGTGTGCACTTCAACCTGCCTGAAGATGACAAAGGAAGTGAAGCATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp TTGCAGGTGAATGTAACTGGAGAGCCTTCTGTGACCCGGAAGTGCTaGAGTCTCTTGTCAAAGATGGGAGCAATACACTTGCCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: LQVNVTGEPSVTRKC*SLLSKMGAIHLPVG
Trigger: CCCCACGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGAAGGCTCTCCAGTTACATTCACCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp GAAAGCCCTCCTGGAGATTTGGTTTGCACAGAGGGGTaGGACACTAAGAGGCTTTCTTTGCTCACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: ESPPGDLVCTEG*DTKRLSLLTVL
Trigger: GAGGACAGTGAGCAAAGAAAGCCTCTTAGTGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp AGGAGCCTTCACCTGCTTACTGGATGTTGTCACCGCTaGGGGAGCATTGGAGTTCAAAACAGTCATGCTGAA +
Preference number: 6 (lower is better)
Translates to: RSLHLLTGCCHR*GSIGVQNSHAE
Trigger: TTCAGCATGACTGTTTTGAACTCCAATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp TCTGTGATGAAGGAGCCTTCACCTGCTTACTGGATGTaGTCACCGCTGGGGGAGCATTGGAGTTCAAAACAG +
Preference number: 6 (lower is better)
Translates to: SVMKEPSPAYWM*SPLGEHWSSKQ
Trigger: CTGTTTTGAACTCCAATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGGCTCCTTCATCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp CCTCTCACGTGCAGCTGTGCAATGCTTGACACTGTGCCGTATTTGTaGCTTGCAGTACATGTGAAGCACCCAGAATCTTCTGCAAACACC +
Preference number: 6 (lower is better)
Translates to: PLTCSCAMLDTVPYL*LAVHVKHPESSANT
Trigger: GGTGTTTGCAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCAACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp GGAGCCTTCACCTGCTTACTGGATGTTGTCACCGCTGGGGGAGCATaGGAGTTCAAAACAGTCATGCTGAAAGGAAACTCCTTAGGAGAT +
Preference number: 6 (lower is better)
Translates to: GAFTCLLDVVTAGGA*EFKTVMLKGNSLGD
Trigger: ATCTCCTAAGGAGTTTCCTTTCAGCATGACTGTTTTGAACTCCAATGCTCCCCCAGCGGTGACAACATCCAGTAAGCAGGTGAAGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp AATGTAACTGGAGAGCCTTCTGTGACCCGGAAGTGCTTGAGTCTCTaGTCAAAGATGGGAGCAATACACTTGCCCGTGGGGATCTCATCA +
Preference number: 6 (lower is better)
Translates to: NVTGEPSVTRKCLSL*SKMGAIHLPVGISS
Trigger: TGATGAGATCCCCACGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGAAGGCTCTCCAGTTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp TCCTGTGTCCTCTTCAAAGGCTTCCGCAATGGTCAGTaGGTGCAGATTTCCTGCCTGGACGATGTGAATATC +
Preference number: 6 (lower is better)
Translates to: SCVLFKGFRNGQ*VQISCLDDVNI
Trigger: GATATTCACATCGTCCAGGCAGGAAATCTGCACTCACTGACCATTGCGGAAGCCTTTGAAGAGGACACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp TTTGGACTGGGTTTCAGAACAATACTGTGGCCTTTTTaGCTCCTGGGGGCTTTCTTTAGAGCTGGTGGGACT +
Preference number: 6 (lower is better)
Translates to: FGLGFRTILWPF*LLGAFFRAGGT
Trigger: AGTCCCACCAGCTCTAAAGAAAGCCCCCAGGAGGCAAAAAGGCCACAGTATTGTTCTGAAACCCAGTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GCTCCGCTCGACTCCTCTCATTGTTTCCCCGATGTCTaGTTTCAGCTAAATAGCTCTCTCTTAGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: APLDSSHCFPDV*FQLNSSLLEAE
Trigger: CTCAGCTTCTAAGAGAGAGCTATTTAGCTGAAACCAGACATCGGGGAAACAATGAGAGGAGTCGAGCGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GTGGCTCATTTTGGATGGAAAGCCCTCCTGGAGATTTaGTTTGCACAGAGGGGTGAGACACTAAGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: VAHFGWKALLEI*FAQRGETLRGF
Trigger: AAAGCCTCTTAGTGTCTCACCCCTCTGTGCAAACCAAATCTCCAGGAGGGCTTTCCATCCAAAATGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GATGGAAAATGTGAATGGTGGTGGTGTTGGTTCTGTTaGGCCTGGTGGGAGTGGCTCATTTTGGATGGAAAG +
Preference number: 6 (lower is better)
Translates to: DGKCEWWWCWFC*AWWEWLILDGK
Trigger: CTTTCCATCCAAAATGAGCCACTCCCACCAGGCCCAACAGAACCAACACCACCACCATTCACATTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp GGTCCTCATTTCCTCTCACGTGCAGCTGTGCAATGCTaGACACTGTGCCGTATTTGTTGCTTGCAGTACATG +
Preference number: 6 (lower is better)
Translates to: GPHFLSRAAVQC*TLCRICCLQYM
Trigger: CATGTACTGCAAGCAACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGTGAGAGGAAATGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp GTCCTCATTTCCTCTCACGTGCAGCTGTGCAATGCTTaGCACTGTGCCGTATTTGTTGCTTGCAGTACATGT +
Preference number: 6 (lower is better)
Translates to: VLISSHVQLCNA*HCAVFVACSTC
Trigger: ACATGTACTGCAAGCAACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGTGAGAGGAAATGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp GTGAATGTAACTGGAGAGCCTTCTGTGACCCGGAAGTaGTTGAGTCTCTTGTCAAAGATGGGAGCAATACAC +
Preference number: 6 (lower is better)
Translates to: VNVTGEPSVTRK*LSLLSKMGAIH
Trigger: GTGTATTGCTCCCATCTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGAAGGCTCTCCAGTTACATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CTCCTTGCCTTCACAGTACCACCTTACTTGAGGTGGTaGAATTCCTACCACTATGCAATCCAACTGTACTCG +
Preference number: 6 (lower is better)
Translates to: LLAFTVPPYLRW*NSYHYAIQLYS
Trigger: CGAGTACAGTTGGATTGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGGTGGTACTGTGAAGGCAAGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
CDS CAA 72 bp CAGGCACGAGGTCTAATCCTTTTGGAGCTGTGGGATTaGAAAAGGGAGGATAGCTCTTCAATGAAGTCGGCA +
Preference number: 6 (lower is better)
Translates to: QARGLILLELWD*KREDSSSMKSA
Trigger: TGCCGACTTCATTGAAGAGCTATCCTCCCTTTTCAAATCCCACAGCTCCAAAAGGATTAGACCTCGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp ACGTGCAGCTGTGCAATGCTTGACACTGTGCCGTATTaGTTGCTTGCAGTACATGTGAAGCACCCAGAATCT +
Preference number: 6 (lower is better)
Translates to: TCSCAMLDTVPY*LLAVHVKHPES
Trigger: AGATTCTGGGTGCTTCACATGTACTGCAAGCAACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp TTTCCTCTCACGTGCAGCTGTGCAATGCTTGACACTGTGCCGTATTaGTTGCTTGCAGTACATGTGAAGCACCCAGAATCTTCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: FPLTCSCAMLDTVPY*LLAVHVKHPESSAN
Trigger: GTTTGCAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCAACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGTGAGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp ATGGTCAGTGAGTGCAGATTTCCTGCCTGGACGATGTaGATATCTGGGGAATTTTCAAGCTCCTTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: MVSECRFPAWTM*ISGEFSSSLPS
Trigger: TGAAGGCAAGGAGCTTGAAAATTCCCCAGATATTCACATCGTCCAGGCAGGAAATCTGCACTCACTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp AAGTTCATCACTCTCCACTACACTCCGAGAAGAGCATaGATACACCATCGTGCTTTCCATGGAGGAAAAGGC +
Preference number: 6 (lower is better)
Translates to: KFITLHYTPRRA*IHHRAFHGGKG
Trigger: GCCTTTTCCTCCATGGAAAGCACGATGGTGTATTCATGCTCTTCTCGGAGTGTAGTGGAGAGTGATGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp AATGTAACTGGAGAGCCTTCTGTGACCCGGAAGTGCTaGAGTCTCTTGTCAAAGATGGGAGCAATACACTTG +
Preference number: 6 (lower is better)
Translates to: NVTGEPSVTRKC*SLLSKMGAIHL
Trigger: CAAGTGTATTGCTCCCATCTTTGACAAGAGACTCAAGCACTTCCGGGTCACAGAAGGCTCTCCAGTTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp TGCAGAGAGCATGTCCCATCTCCTTCTCGCCTCATTTaGCAGTGCTCATTTCTCTTAGAAATCTGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: CREHVPSPSRLI*QCSFLLEICFP
Trigger: TGGGAAGCAGATTTCTAAGAGAAATGAGCACTGCAAAATGAGGCGAGAAGGAGATGGGACATGCTCTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp TTGACACTGTGCCGTATTTGTTGCTTGCAGTACATGTaGAGCACCCAGAATCTTCTGCAAACACCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: LTLCRICCLQYM*STQNLLQTPQQ
Trigger: TTGCTGAGGTGTTTGCAGAAGATTCTGGGTGCTTCACATGTACTGCAAGCAACAAATACGGCACAGTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CAA 72 bp ACCTCATTTGGCTTCTGGATTCGATTCATCTCTTCCTaGTTAGGGTCGCCTTCTGAGTCAGAAGAAGAAACC +
Preference number: 6 (lower is better)
Translates to: TSFGFWIRFISS*LGSPSESEEET
Trigger: GGTTTCTTCTTCTGACTCAGAAGGCGACCCTAACAAGGAAGAGATGAATCGAATCCAGAAGCCAAATGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp TCCAGTTTACTCTTGTGGTTTTTGCAGGCACGAGGTCTAATCCTTTaGGAGCTGTGGGATTTGAAAAGGGAGGATAGCTCTTCAATGAAG +
Preference number: 6 (lower is better)
Translates to: SSLLLWFLQARGLIL*ELWDLKREDSSSMK
Trigger: CTTCATTGAAGAGCTATCCTCCCTTTTCAAATCCCACAGCTCCAAAAGGATTAGACCTCGTGCCTGCAAAAACCACAAGAGTAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CAA 90 bp GATTCAATGTGCAGAGAGCATGTCCCATCTCCTTCTCGCCTCATTTaGCAGTGCTCATTTCTCTTAGAAATCTGCTTCCCATCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: DSMCREHVPSPSRLI*QCSFLLEICFPSLN
Trigger: GTTCAAAGATGGGAAGCAGATTTCTAAGAGAAATGAGCACTGCAAAATGAGGCGAGAAGGAGATGGGACATGCTCTCTGCACATTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS TCA 72 bp CAAAACAGTCATGCTGAAAGGAAACTCCTTAGGAGATaGAGGAGGTGGGTTTTGCAATTGGTGTTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: QNSHAERKLLRR*RRWVLQLVLFQ
Trigger: CTGGAACAACACCAATTGCAAAACCCACCTCCTTCATCTCCTAAGGAGTTTCCTTTCAGCATGACTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp TGCAACTTACTTGAGGTGGTGGAATTCCTACCACTATaGAATCCAACTGTACTCGAGTTCCTTCTGGAACTT +
Preference number: 6 (lower is better)
Translates to: CNLLEVVEFLPL*NPTVLEFLLEL
Trigger: AAGTTCCAGAAGGAACTCGAGTACAGTTGGATTGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGTTGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS CAA 72 bp CCAGAGCATTTGTCAGCTCACAGGTCCCAAGTTATTTaGAGCTGTATAAACCATGTGCCTGTGAAACATTCC +
Preference number: 6 (lower is better)
Translates to: PEHLSAHRSQVI*SCINHVPVKHS
Trigger: GGAATGTTTCACAGGCACATGGTTTATACAGCTCAAAATAACTTGGGACCTGTGAGCTGACAAATGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS TCA 72 bp GGAGCTCCTTTTACTCTGCATTCAAAGACAACCAGCTaGCCCTCAGAAGCTGACAAATTTTGTAGCATCTTT +
Preference number: 6 (lower is better)
Translates to: GAPFTLHSKTTS*PSEADKFCSIF
Trigger: AAAGATGCTACAAAATTTGTCAGCTTCTGAGGGTCAGCTGGTTGTCTTTGAATGCAGAGTAAAAGGAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000373675.3
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp GTCTCTTGTCAAAGATGGGAGCAATACACTTGCCCGTaGGGATCTCATCATGTTGAATTTCATCATCTGATT +
Preference number: 6 (lower is better)
Translates to: VSCQRWEQYTCP*GSHHVEFHHLI
Trigger: AATCAGATGATGAAATTCAACATGATGAGATCCCCACGGGCAAGTGTATTGCTCCCATCTTTGACAAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS CCA 72 bp CTTCTTCATATACAGAGTGCAACTTACTTGAGGTGGTaGAATTCCTACCACTATGCAATCCAACTGTACTCG +
Preference number: 6 (lower is better)
Translates to: LLHIQSATYLRW*NSYHYAIQLYS
Trigger: CGAGTACAGTTGGATTGCATAGTGGTAGGAATTCCACCACCTCAAGTAAGTTGCACTCTGTATATGAAGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613327.4
CDS CAA 72 bp CACGAATGTTATCATCATTCACTGGTTGAGGAGACTTaGTATTTTTCTTCGCTAATCCCTGGGATGGCATGG +
Preference number: 6 (lower is better)
Translates to: HECYHHSLVEET*YFSSLIPGMAW
Trigger: CCATGCCATCCCAGGGATTAGCGAAGAAAAATACAAAGTCTCCTCAACCAGTGAATGATGATAACATTCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354393.6
ENST00000358913.10
ENST00000540630.5
ENST00000613327.4
CDS GCA 72 bp TGCTTTGGACATGTTTTTCAACTCATGTTAACTCGGTaGTATCCTTCTTCAGGCTCTAAGAAGACCCTTTCT +
Preference number: 6 (lower is better)
Translates to: CFGHVFQLMLTR*YPSSGSKKTLS
Trigger: AGAAAGGGTCTTCTTAGAGCCTGAAGAAGGATAGCACCGAGTTAACATGAGTTGAAAAACATGTCCAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613327.4