RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYORG (Homo sapiens)

Ensembl gene IDs: ENSG00000164976

Ensembl transcript IDs: ENST00000297625.8, ENST00000379142.3

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTCCTGGGAGTACATGGTGCGGGTGTGACGGAGGGTTCAAGGTCTaGATGAAGACTGGGGGCTTTGCGGTTACCGGGCCCTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: VPGSTWCGCDGGFKV*MKTGGFAVTGPWAG
Trigger: CCCAGCCCAGGGCCCGGTAACCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAACCCTCCGTCACACCCGCACCATGTACTCCCAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 90 bp GGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGTaGCGGAGGGTTCAAGGTCTGCATGAAGACTGGGGGCTTTGCGGT +
Preference number: 1 (lower is better)
Translates to: GGIEVGGSWEYMVRV*RRVQGLHEDWGLCG
Trigger: ACCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAACCCTCCGTCACACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp ACGCACACTCTTCAGTTAAGGCACGAAGTCTGGCCTGCATGGCCCTaGAAGTCTGTTCCCATCAGGCACATTTGGCCCAGGGCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: THTLQLRHEVWPAWP*KSVPIRHIWPRAEP
Trigger: GGGCTCAGCCCTGGGCCAAATGTGCCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAACTGAAGAGTGTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp GGGATCTCTTGCCTCCTTGTCAGCCAAACACCTCCCCAGCTGGACTaGGACCAAATCAGCCACAGTTCAGGTGAGTGCTGGGGACTCAGG +
Preference number: 1 (lower is better)
Translates to: GISCLLVSQTPPQLD*DQISHSSGECWGLR
Trigger: CCTGAGTCCCCAGCACTCACCTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAAGGAGGCAAGAGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp GCCATGACTAGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTaGACACAGCAAGGGGACCTTGGGCCTGGCCCACAAAACCATTTT +
Preference number: 1 (lower is better)
Translates to: AMTRAAGMHGTKSLG*TQQGDLGPGPQNHF
Trigger: AAAATGGTTTTGTGGGCCAGGCCCAAGGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCTAGTCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp GGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTaGAGGGTACAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGTT +
Preference number: 1 (lower is better)
Translates to: GGGFPWSWAAPPLWH*RVQPTSRLLLQAGV
Trigger: AACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp ACACACACGCACACTCTTCAGTTAAGGCACGAAGTCTGGCCTGCATaGCCCTGCAAGTCTGTTCCCATCAGGCACATTTGGCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: THTHTLQLRHEVWPA*PCKSVPIRHIWPRA
Trigger: AGCCCTGGGCCAAATGTGCCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAACTGAAGAGTGTGCGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp GATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATaGCATTGCAGGGTACAGCCTACTTCTCGGTTGCTTTTACAGGCT +
Preference number: 1 (lower is better)
Translates to: DAGGGFPWSWAAPPL*HCRVQPTSRLLLQA
Trigger: AGCCTGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp ACACACACACACGCACACTCTTCAGTTAAGGCACGAAGTCTGGCCTaGATGGCCCTGCAAGTCTGTTCCCATCAGGCACATTTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: THTHAHSSVKARSLA*MALQVCSHQAHLAQ
Trigger: CTGGGCCAAATGTGCCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAACTGAAGAGTGTGCGTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp CCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGGTGAGTGCTaGGGACTCAGGGCCTGGCTTCTAACACTAAGAAAACACACGTTC +
Preference number: 1 (lower is better)
Translates to: PQLDWDQISHSSGEC*GLRAWLLTLRKHTF
Trigger: GAACGTGTGTTTTCTTAGTGTTAGAAGCCAGGCCCTGAGTCCCCAGCACTCACCTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp GTCTGGCCTGCATGGCCCTGCAAGTCTGTTCCCATCAGGCACATTTaGCCCAGGGCTGAGCCCATGTATGTACACAAATGGGTTAGTGCA +
Preference number: 1 (lower is better)
Translates to: VWPAWPCKSVPIRHI*PRAEPMYVHKWVSA
Trigger: TGCACTAACCCATTTGTGTACATACATGGGCTCAGCCCTGGGCCAAATGTGCCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp CAGCAGCTGGTTCCAGCACATTTAAGTCAGCAGCCACTTAATGGGTaGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGTG +
Preference number: 1 (lower is better)
Translates to: QQLVPAHLSQQPLNG*YRGGRFLGVHGAGV
Trigger: CACACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTGGCTGCTGACTTAAATGTGCTGGAACCAGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp CTCTCACACACACACACGCACACTCTTCAGTTAAGGCACGAAGTCTaGCCTGCATGGCCCTGCAAGTCTGTTCCCATCAGGCACATTTGG +
Preference number: 1 (lower is better)
Translates to: LSHTHTHTLQLRHEV*PAWPCKSVPIRHIW
Trigger: CCAAATGTGCCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAACTGAAGAGTGTGCGTGTGTGTGTGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp CAGCTGAGGAATCTTGAAAGGGCTATTTATTTCCTACGAGAGTCCTaGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTC +
Preference number: 1 (lower is better)
Translates to: QLRNLERAIYFLRES*GNRLGGGWLSNQSL
Trigger: GAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGACTCTCGTAGGAAATAAATAGCCCTTTCAAGATTCCTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 90 bp TTGCAGGGTACAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGTTaGGTGTCTGTGGCTTTTCCAGGTGCATGGTGCAAGCTGTCAGTG +
Preference number: 1 (lower is better)
Translates to: LQGTAYFSVAFTGWR*VSVAFPGAWCKLSV
Trigger: CACTGACAGCTTGCACCATGCACCTGGAAAAGCCACAGACACTCAACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 90 bp GCTTTTCCAGGTGCATGGTGCAAGCTGTCAGTGGATATACCATTCTaGTGTCTGGAGGACGGTGGCCTTCTTCTGACAGCTCTACTAGGC +
Preference number: 1 (lower is better)
Translates to: AFPGAWCKLSVDIPF*CLEDGGLLLTALLG
Trigger: GCCTAGTAGAGCTGTCAGAAGAAGGCCACCGTCCTCCAGACATCAGAATGGTATATCCACTGACAGCTTGCACCATGCACCTGGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp CAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGTTGAGTGTCTGTaGCTTTTCCAGGTGCATGGTGCAAGCTGTCAGTGGATATACCAT +
Preference number: 1 (lower is better)
Translates to: QPTSRLLLQAGVECL*LFQVHGASCQWIYH
Trigger: ATGGTATATCCACTGACAGCTTGCACCATGCACCTGGAAAAGCCACAGACACTCAACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp GGTTGCTTTTACAGGCTGGCGTTGAGTGTCTGTGGCTTTTCCAGGTaGATGGTGCAAGCTGTCAGTGGATATACCATTCTGATGTCTGGA +
Preference number: 1 (lower is better)
Translates to: GCFYRLALSVCGFSR*MVQAVSGYTILMSG
Trigger: TCCAGACATCAGAATGGTATATCCACTGACAGCTTGCACCATGCACCTGGAAAAGCCACAGACACTCAACGCCAGCCTGTAAAAGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp TCCCTCCCACAATTATGGGAGCTACAATTTAAGGTGATATTTGGATaGGGACACAGCCAAACCATATCATTCTCTCCCTGGCCCCTCCCA +
Preference number: 1 (lower is better)
Translates to: SLPQLWELQFKVIFG*GHSQTISFSPWPLP
Trigger: TGGGAGGGGCCAGGGAGAGAATGATATGGTTTGGCTGTGTCCCCATCCAAATATCACCTTAAATTGTAGCTCCCATAATTGTGGGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp AATGAACTCACAGTTCCATGTGGCTGGGAGGCCTCACAATCATGGTaGAAGGCAAAAGGCACATCTTACATGGCAGCAGACAAGAGAGAA +
Preference number: 1 (lower is better)
Translates to: NELTVPCGWEASQSW*KAKGTSYMAADKRE
Trigger: TTCTCTCTTGTCTGCTGCCATGTAAGATGTGCCTTTTGCCTTCCACCATGATTGTGAGGCCTCCCAGCCACATGGAACTGTGAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 90 bp CAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTaGTCCCTCCAAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCA +
Preference number: 1 (lower is better)
Translates to: QVSRKSQTFPHFPVF*SLQTVPTSACYPVP
Trigger: TGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTTGGAGGGATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp ATCAGGCACATTTGGCCCAGGGCTGAGCCCATGTATGTACACAAATaGGTTAGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATG +
Preference number: 1 (lower is better)
Translates to: IRHIWPRAEPMYVHK*VSAVLGVSSQIGNM
Trigger: CATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACTAACCCATTTGTGTACATACATGGGCTCAGCCCTGGGCCAAATGTGCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp CCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTaGGTATTTACAGCAGCGCCCCACTCTACTGGTACCAATTTACTG +
Preference number: 1 (lower is better)
Translates to: PTSACYPVPKLLPHF*VFTAAPHSTGTNLL
Trigger: CAGTAAATTGGTACCAGTAGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp TTTAATGAACTCACAGTTCCATGTGGCTGGGAGGCCTCACAATCATaGTGGAAGGCAAAAGGCACATCTTACATGGCAGCAGACAAGAGA +
Preference number: 1 (lower is better)
Translates to: FNELTVPCGWEASQS*WKAKGTSYMAADKR
Trigger: TCTCTTGTCTGCTGCCATGTAAGATGTGCCTTTTGCCTTCCACCATGATTGTGAGGCCTCCCAGCCACATGGAACTGTGAGTTCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp TCTCGTGAGACTTATTCACTACCACCAGAACAGTATGGGAGAAACTaGCCCTATGATTCAATTATCTCCCACCAGGTCCCTCCCACAATT +
Preference number: 1 (lower is better)
Translates to: SRETYSLPPEQYGRN*PYDSIISHQVPPTI
Trigger: AATTGTGGGAGGGACCTGGTGGGAGATAATTGAATCATAGGGGCAGTTTCTCCCATACTGTTCTGGTGGTAGTGAATAAGTCTCACGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp GCCCCTATGATTCAATTATCTCCCACCAGGTCCCTCCCACAATTATaGGAGCTACAATTTAAGGTGATATTTGGATGGGGACACAGCCAA +
Preference number: 1 (lower is better)
Translates to: APMIQLSPTRSLPQL*ELQFKVIFGWGHSQ
Trigger: TTGGCTGTGTCCCCATCCAAATATCACCTTAAATTGTAGCTCCCATAATTGTGGGAGGGACCTGGTGGGAGATAATTGAATCATAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp TCTCATGAGATCTATTCACTATCACCAGAACAGTATGGCGGAAACTaGCCCCATATTTCAATTATCTCCCACTGGGTCCTTCCCACAACA +
Preference number: 1 (lower is better)
Translates to: SHEIYSLSPEQYGGN*PHISIISHWVLPTT
Trigger: TGTTGTGGGAAGGACCCAGTGGGAGATAATTGAAATATGGGGGCAGTTTCCGCCATACTGTTCTGGTGATAGTGAATAGATCTCATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 90 bp CCCACATTTTCCTGTCTTCTGATCCCTCCAAACTGTTCCAACCTCTaGCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATT +
Preference number: 1 (lower is better)
Translates to: PTFSCLLIPPNCSNL*LLPSSKVASTFLGI
Trigger: AATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTTGGAGGGATCAGAAGACAGGAAAATGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp TTCAATTATCTCCCACTGGGTCCTTCCCACAACACATGGCAATTATaGGAGCTACAATTCAAGATGAGTTTTAGGTGGGGACACAGCCAA +
Preference number: 1 (lower is better)
Translates to: FNYLPLGPSHNTWQL*ELQFKMSFRWGHSQ
Trigger: TTGGCTGTGTCCCCACCTAAAACTCATCTTGAATTGTAGCTCCCATAATTGCCATGTGTTGTGGGAAGGACCCAGTGGGAGATAATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 90 bp GTAGCAAACTTCTGCCTGGACATACATGCATTTCCATACATTCTCTaGAATCTAGGCAGAGGTTCCCAAACCTCAGTTCTTGACTTCTGT +
Preference number: 1 (lower is better)
Translates to: VANFCLDIHAFPYIL*NLGRGSQTSVLDFC
Trigger: ACAGAAGTCAAGAACTGAGGTTTGGGAACCTCTGCCTAGATTTCAGAGAATGTATGGAAATGCATGTATGTCCAGGCAGAAGTTTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 90 bp TTTATGAAGAAAAAGAGGTTTAATGAACTCACAGTTCCATGTGGCTaGGAGGCCTCACAATCATGGTGGAAGGCAAAAGGCACATCTTAC +
Preference number: 1 (lower is better)
Translates to: FMKKKRFNELTVPCG*EASQSWWKAKGTSY
Trigger: GTAAGATGTGCCTTTTGCCTTCCACCATGATTGTGAGGCCTCCCAGCCACATGGAACTGTGAGTTCATTAAACCTCTTTTTCTTCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 90 bp GTTTTCACACTGCTGATAAAGACATACCCGAGACTGGGTAATTTATaGAGAAAAAGAGGTTTAATGAACTCACAGTTCCATGTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: VFTLLIKTYPRLGNL*RKRGLMNSQFHVAG
Trigger: CCCAGCCACATGGAACTGTGAGTTCATTAAACCTCTTTTTCTTCATAAATTACCCAGTCTCGGGTATGTCTTTATCAGCAGTGTGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCAGGCCTCCAGGCCTGTaGTGGGAGGCACTGCTGCAA +
Preference number: 2 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSRPPGL*WEALLQ
Trigger: TTGCAGCAGTGCCTCCCATCACAGGCCTGGAGGCCT...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCCCCATCAGGCACATTTaGCCCAGGGCTGAGCCCATG +
Preference number: 2 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTPIRHI*PRAEPM
Trigger: CATGGGCTCAGCCCTGGGCCAAATGTGCCTGATGGG...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTACCTGGGAGTACATGGTaGGGGTGTGACGGAGGGTTC +
Preference number: 2 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLPGSTW*GCDGGF
Trigger: GAACCCTCCGTCACACCCGCACCATGTACTCCCAGG...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGTTCCTGGGAGTACATaGTGCGGGTGTGACGGAGGG +
Preference number: 2 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSVPGST*CGCDGG
Trigger: CCCTCCGTCACACCCGCACCATGTACTCCCAGGAAC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCGGGGTTGCAGTGAGCTaGTTGTGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVGVAVS*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCAGCTCACTGCAACCCC...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGGAAGACTGGGGGCTTTaGGGTTACCGGGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPREDWGL*GYRALG
Trigger: GCCCAGGGCCCGGTAACCGCAAAGCCCCCAGTCTTC...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAGAAGTCTGGCCTGCATaGCCCTGCAAGTCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLEVWPA*PCKSVP
Trigger: GGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTC...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 90 bp AGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATaGCAGGGTACAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGT +
Preference number: 2 (lower is better)
Translates to: RRWVPMVLGSSTPMA*QGTAYFSVAFTGWR
Trigger: ACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATCACAGTTCAGGTGAGTaGTGGGGACTCAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHHSSGE*WGLRAW
Trigger: CCAGGCCCTGAGTCCCCAGCACTCACCTGAACTGTG...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 90 bp CACCTGCAGGCTCAACACTACGTGGAAGATGCCAAGACTTGGGGCTaGCACCCTCTGAAGCCAAGGCCTGAGCTGTATCTTGGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: HLQAQHYVEDAKTWG*HPLKPRPELYLGPF
Trigger: AAAGGGGCCAAGATACAGCTCAGGCCTTGGCTTCAGAGGGTGCAAGCCCCAAGTCTTGGCATCTTCCACGTAGTGTTGAGCCTGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCTGCTACCAGAGCTGTTaGTGGAAGCTAAAGTTCACC +
Preference number: 2 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTCYQSC*WKLKFT
Trigger: GGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCA...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGGGTCTGCATGAAGACTaGGGGCTTTGCGGTTACCGG +
Preference number: 2 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRGLHED*GLCGYR
Trigger: CCGGTAACCGCAAAGCCCCCAGTCTTCATGCAGACC...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGAGGAGATTGCTTCAGTaGCCCCTCCCTAGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SATQSLEPRRRGCSELIVRRLLQ*PLPRPH
Trigger: GTGGGGCCTAGGGAGGGGGCACTGAAGCAATCTCCT...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACGAGGAGGGGTTGCAGTaGGCTGATTGTGCCACTGCA +
Preference number: 2 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYEEGLQ*ADCATA
Trigger: TGCAGTGGCACAATCAGCTCACTGCAACCCCTCCTC...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGTGGCCTGCATGGCCCTaGAAGTCTGTTCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: SATQSLEPRRRGCSELIVWPAWP*KSVPIR
Trigger: CCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCA...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACGCACGAAGTCTGGCCTaGATGGCCCTGCAAGTCTGT +
Preference number: 2 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYARSLA*MALQVC
Trigger: ACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGC...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGAGTCCTCCTGTTCCCTaGGAGGGGATCTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: SATQSLEPRRRGCSELIVSPPVP*EGISCL
Trigger: GAGGCAAGAGATCCCCTCCCAGGGAACAGGAGGACT...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACGTTGGAGCAGGAGATTaGTTCAGTGCCCCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYVGAGD*FSAPSL
Trigger: TAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAAC...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTACAGTATGGCGGAAACTaGCCCCATATTTCAATTATC +
Preference number: 2 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLQYGGN*PHISII
Trigger: GATAATTGAAATATGGGGGCAGTTTCCGCCATACTG...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp TTGTCAGCCAAACACCTCCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGCAGCCACTTAATGGGTaGTATAGAGGTGGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: LSAKHLPSWTGTKSATVQQPLNG*YRGGRF
Trigger: GAACCTCCCACCTCTATACCACCCATTAAGTGGCTG...CTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGAAACACCTCCCCAGCTaGACTGGGACCAAATCAGCC +
Preference number: 2 (lower is better)
Translates to: GSCQCVHVACVQKHRPPEKHLPS*TGTKSA
Trigger: GGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTT...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCAAGATGAGTTTTAGGTaGGGACACAGCCAAACCATA +
Preference number: 2 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSKMSFR*GHSQTI
Trigger: TATGGTTTGGCTGTGTCCCCACCTAAAACTCATCTT...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 90 bp ATTGCAGGGTACAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGTaGAGTGTCTGTGGCTTTTCCAGGTGCATGGTGCAAGCTGTCAGT +
Preference number: 2 (lower is better)
Translates to: IAGYSLLLGCFYRLA*SVCGFSRCMVQAVS
Trigger: ACTGACAGCTTGCACCATGCACCTGGAAAAGCCACAGACACTCAACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCAATCATCAGCTCTCATaGGATCTATTCACTATCACC +
Preference number: 2 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSNHQLS*DLFTIT
Trigger: GGTGATAGTGAATAGATCTCATGAGAGCTGATGATT...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGGGAGGGTTCAAGGTCTaGATGAAGACTGGGGGCTTT +
Preference number: 2 (lower is better)
Translates to: SATQSLEPRRRGCSELIVGGFKV*MKTGGF
Trigger: AAAGCCCCCAGTCTTCATGCAGACCTTGAACCCTCC...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATTGGGGACTCAGGGCCTaGCTTCTAACACTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHWGLRA*LLTLRK
Trigger: TTTTCTTAGTGTTAGAAGCCAGGCCCTGAGTCCCCA...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCTACATGGTGCGGGTGTaGCGGAGGGTTCAAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCYMVRV*RRVQGL
Trigger: CAGACCTTGAACCCTCCGTCACACCCGCACCATGTA...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACTGCTGCAAAGGTCTCTaGCATGCCCTGCAGACATTT +
Preference number: 2 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYCCKGL*HALQTF
Trigger: AAATGTCTGCAGGGCATGTCAGAGACCTTTGCAGCA...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACGTCTCTGACATGCCCTaGAGACATTTTCCCCATGTC +
Preference number: 2 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYVSDMP*RHFPHV
Trigger: GACATGGGGAAAATGTCTGCAGGGCATGTCAGAGAC...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCTTAAGGCACGAAGTCTaGCCTGCATGGCCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSLRHEV*PAWPCK
Trigger: CTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAA...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTCATTTGGCCCAGGGCTaGGCCCATGTATGTACACAA +
Preference number: 2 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSHLAQG*AHVCTQ
Trigger: TTGTGTACATACATGGGCTCAGCCCTGGGCCAAATG...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGGTAAGGATTGTGCGTTaGAGCAGGAGATTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: SATQSLEPRRRGCSELIVVRIVR*SRRLLQ
Trigger: CTGAAGCAATCTCCTGCTCCAACGCACAATCCTTAC...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGAGTCCCCACCTAAGATaGACAAAGATGGCCACGAAA +
Preference number: 2 (lower is better)
Translates to: GSCQCVHVACVQKHRPPESPHLR*TKMATK
Trigger: TTTCGTGGCCATCTTTGTCCATCTTAGGTGGGGACT...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 90 bp GAGGTACAGGCATTGGCTAAATACACCCATTTCAAGTGGGAGAAGTaGGCCAAAACGAAGTGGCTAAAGGCCCCATGCAAGTCTGAAATC +
Preference number: 2 (lower is better)
Translates to: EVQALAKYTHFKWEK*AKTKWLKAPCKSEI
Trigger: GATTTCAGACTTGCATGGGGCCTTTAGCCACTTCGTTTTGGCCAACTTCTCCCACTTGAAATGGGTGTATTTAGCCAATGCCTGTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 90 bp TCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTaGGGTATTTACAGCAGCGCCCCACTCTACTGGTACCAATTTACT +
Preference number: 2 (lower is better)
Translates to: SNLCLLPSSKVASTF*GIYSSAPLYWYQFT
Trigger: AGTAAATTGGTACCAGTAGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR TCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATGGTTCAAGGTCTGCATaGAGACTGGGGGCTTTGCGG +
Preference number: 2 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDGSRSA*RLGALR
Trigger: CCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAACC...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTCCTAGGAGGAGGGGTTaGAGTGAGCTGATTGTGCCA +
Preference number: 2 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSPRRRG*SELIVP
Trigger: TGGCACAATCAGCTCACTGCAACCCCTCCTCCTAGG...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTGAGGTTTCTGCAGATTaGTGTGAGTGTGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSEVSAD*CECGGG
Trigger: TCCACCCCCACACTCACACCAATCTGCAGAAACCTC...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTAGTCTCTTCACAAATTaGGAACATGATGATGGCTCT +
Preference number: 2 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSSLFTN*EHDDGS
Trigger: AGAGCCATCATCATGTTCCCAATTTGTGAAGAGACT...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR GCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCTCAAATTTGCTCCATaGCCCCTTCCTCCAGATCAT +
Preference number: 2 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSLKFAP*PLPPDH
Trigger: ATGATCTGGAGGAAGGGGGCATGGAGCAAATTTGAG...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTCTTAGAAAGAGAAAATaGCTGGCGTGGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSLRKRK*LAWWLM
Trigger: CATGAGCCACCACGCCAGCCATTTTCTCTTTCTAAG...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCATCACCAGAACAGTATaGCGGAAACTGCCCCCATAT +
Preference number: 2 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSITRTV*RKLPPY
Trigger: ATATGGGGGCAGTTTCCGCCATACTGTTCTGGTGAT...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp CATGGTGCGGGTGTGACGGAGGGTTCAAGGTCTGCATaGAGACTGGGGGCTTTGCGGTTACCGGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: HGAGVTEGSRSA*RLGALRLPGPG
Trigger: CCCAGGGCCCGGTAACCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAACCCTCCGTCACACCCGCACCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCCTGGGAGGGGATCTCTaGCCTCCTTGTCAGCCAAAC +
Preference number: 3 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTLGGDL*PPCQPN
Trigger: GTTTGGCTGACAAGGAGGCAAGAGATCCCCTCCCAG...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp GAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGTaGCGGAGGGTTCAAGGTCTGCATGAAGACTGGGGG +
Preference number: 3 (lower is better)
Translates to: EVGGSWEYMVRV*RRVQGLHEDWG
Trigger: CCCCCAGTCTTCATGCAGACCTTGAACCCTCCGTCACACCCGCACCATGTACTCCCAGGAACCTCCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACGGTAGGGGACTGGTTTaGCTACCAGAGCTGTTGATG +
Preference number: 3 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDGRGLV*LPELLM
Trigger: CATCAACAGCTCTGGTAGCAAAACCAGTCCCCTACC...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp GGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTaGTCCATGCCCCCTTCCTCCAGATCATCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: GRRLAQQSEPQI*SMPPSSRSSSL
Trigger: GAGGCTGGATGATCTGGAGGAAGGGGGCATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp TGTGGGGGTGGAAAGGGCACAGTAAGGATTGTGCGTTaGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGG +
Preference number: 3 (lower is better)
Translates to: CGGGKGTVRIVR*SRRLLQCPLPR
Trigger: CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGTGCCCTTTCCACCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp TGCCTCCTTGTCAGCCAAACACCTCCCCAGCTGGACTaGGACCAAATCAGCCACAGTTCAGGTGAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: CLLVSQTPPQLD*DQISHSSGECW
Trigger: CCAGCACTCACCTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp GGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATaGCATTGCAGGGTACAGCCTACTTCTCGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: GGFPWSWAAPPL*HCRVQPTSRLL
Trigger: AAGCAACCGAGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACCGTTGGAGCAGGAGATaGCTTCAGTGCCCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYRWSRR*LQCPLP
Trigger: AGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACG...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp ACGTGGAAGATGCCAAGACTTGGGGCTTGCACCCTCTaGAGCCAAGGCCTGAGCTGTATCTTGGCCCCTTTT +
Preference number: 3 (lower is better)
Translates to: TWKMPRLGACTL*SQGLSCILAPF
Trigger: AAAAGGGGCCAAGATACAGCTCAGGCCTTGGCTTCAGAGGGTGCAAGCCCCAAGTCTTGGCATCTTCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp CTGGACTGGGACCAAATCAGCCACAGTTCAGGTGAGTaGTGGGGACTCAGGGCCTGGCTTCTAACACTAAGA +
Preference number: 3 (lower is better)
Translates to: LDWDQISHSSGE*WGLRAWLLTLR
Trigger: TCTTAGTGTTAGAAGCCAGGCCCTGAGTCCCCAGCACTCACCTGAACTGTGGCTGATTTGGTCCCAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp CACGCACACTCTTCAGTTAAGGCACGAAGTCTGGCCTaGATGGCCCTGCAAGTCTGTTCCCATCAGGCACAT +
Preference number: 3 (lower is better)
Translates to: HAHSSVKARSLA*MALQVCSHQAH
Trigger: ATGTGCCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAACTGAAGAGTGTGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp TCTCTTGCCTCCTTGTCAGCCAAACACCTCCCCAGCTaGACTGGGACCAAATCAGCCACAGTTCAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: SLASLSAKHLPS*TGTKSATVQVS
Trigger: ACTCACCTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAAGGAGGCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp GCATGGCCCTGCAAGTCTGTTCCCATCAGGCACATTTaGCCCAGGGCTGAGCCCATGTATGTACACAAATGG +
Preference number: 3 (lower is better)
Translates to: AWPCKSVPIRHI*PRAEPMYVHKW
Trigger: CCATTTGTGTACATACATGGGCTCAGCCCTGGGCCAAATGTGCCTGATGGGAACAGACTTGCAGGGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp CAGGCCTGTGATGGGAGGCACTGCTGCAAAGGTCTCTaGCATGCCCTGCAGACATTTTCCCCATGTCTTAGT +
Preference number: 3 (lower is better)
Translates to: QACDGRHCCKGL*HALQTFSPCLS
Trigger: ACTAAGACATGGGGAAAATGTCTGCAGGGCATGTCAGAGACCTTTGCAGCAGTGCCTCCCATCACAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp TTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTaGAGGGTACAGCCTACTTCTCGGTTGCTTTTACAG +
Preference number: 3 (lower is better)
Translates to: FPWSWAAPPLWH*RVQPTSRLLLQ
Trigger: CTGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp CTGTGGCTTTTCCAGGTGCATGGTGCAAGCTGTCAGTaGATATACCATTCTGATGTCTGGAGGACGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LWLFQVHGASCQ*IYHSDVWRTVA
Trigger: GGCCACCGTCCTCCAGACATCAGAATGGTATATCCACTGACAGCTTGCACCATGCACCTGGAAAAGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp ACAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGTTaGGTGTCTGTGGCTTTTCCAGGTGCATGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: TAYFSVAFTGWR*VSVAFPGAWCK
Trigger: CTTGCACCATGCACCTGGAAAAGCCACAGACACTCAACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp GACTGGGACCAAATCAGCCACAGTTCAGGTGAGTGCTaGGGACTCAGGGCCTGGCTTCTAACACTAAGAAAA +
Preference number: 3 (lower is better)
Translates to: DWDQISHSSGEC*GLRAWLLTLRK
Trigger: TTTTCTTAGTGTTAGAAGCCAGGCCCTGAGTCCCCAGCACTCACCTGAACTGTGGCTGATTTGGTCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp AAGCTAAAGTTCACCCTGTTTCCCACCGACCCGCTCTaGCATGCCACTTTTCTCCAGACTCAGCTGCAAAGT +
Preference number: 3 (lower is better)
Translates to: KLKFTLFPTDPL*HATFLQTQLQS
Trigger: ACTTTGCAGCTGAGTCTGGAGAAAAGTGGCATGCCAGAGCGGGTCGGTGGGAAACAGGGTGAACTTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp GTCAGTGGATATACCATTCTGATGTCTGGAGGACGGTaGCCTTCTTCTGACAGCTCTACTAGGCAGTGTCCC +
Preference number: 3 (lower is better)
Translates to: VSGYTILMSGGR*PSSDSSTRQCP
Trigger: GGGACACTGCCTAGTAGAGCTGTCAGAAGAAGGCCACCGTCCTCCAGACATCAGAATGGTATATCCACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp ACAGTTCCATGTGGCTGGGAGGCCTCACAATCATGGTaGAAGGCAAAAGGCACATCTTACATGGCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: TVPCGWEASQSW*KAKGTSYMAAD
Trigger: GTCTGCTGCCATGTAAGATGTGCCTTTTGCCTTCCACCATGATTGTGAGGCCTCCCAGCCACATGGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp CTCACAGTTCCATGTGGCTGGGAGGCCTCACAATCATaGTGGAAGGCAAAAGGCACATCTTACATGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LTVPCGWEASQS*WKAKGTSYMAA
Trigger: TGCTGCCATGTAAGATGTGCCTTTTGCCTTCCACCATGATTGTGAGGCCTCCCAGCCACATGGAACTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCGGATCTCTTGCCTCCTaGTCAGCCAAACACCTCCCC +
Preference number: 3 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSGSLAS*SAKHLP
Trigger: GGGGAGGTGTTTGGCTGACAAGGAGGCAAGAGATCC...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp CTGAAATCTAGGCAGAGGTTCCCAAACCTCAGTTCTTaGCTTCTGTGCACCTGCAGGCTCAACACTACGTGG +
Preference number: 3 (lower is better)
Translates to: LKSRQRFPNLSS*LLCTCRLNTTW
Trigger: CCACGTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTCTGCCTAGATTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp AATCTTGAAAGGGCTATTTATTTCCTACGAGAGTCCTaGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: NLERAIYFLRES*GNRLGGGWLSN
Trigger: ATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGACTCTCGTAGGAAATAAATAGCCCTTTCAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp AAAAAGAGGTTTAATGAACTCACAGCTCCACGTGGCTaGGGAGGCCTCACAAGCATGACAGAAAGGCACGTC +
Preference number: 3 (lower is better)
Translates to: KKRFNELTAPRG*GGLTSMTERHV
Trigger: GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAGTTCATTAAACCTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACAGTAAGGATTGTGCGTaGGAGCAGGAGATTGCTTCA +
Preference number: 3 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYSKDCA*EQEIAS
Trigger: TGAAGCAATCTCCTGCTCCAACGCACAATCCTTACT...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp CTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTaGTTCCACATTTTTGGGTATTTACAGCAGCGCCCC +
Preference number: 3 (lower is better)
Translates to: LFQPLPVTQFQS*FHIFGYLQQRP
Trigger: GGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp GTTCCAGCACATTTAAGTCAGCAGCCACTTAATGGGTaGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGT +
Preference number: 3 (lower is better)
Translates to: VPAHLSQQPLNG*YRGGRFLGVHG
Trigger: ACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTGGCTGCTGACTTAAATGTGCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp GCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTaGGTATTTACAGCAGCGCCCCACTCTACTGGTACC +
Preference number: 3 (lower is better)
Translates to: ACYPVPKLLPHF*VFTAAPHSTGT
Trigger: GGTACCAGTAGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp ACTACCACCAGAACAGTATGGGAGAAACTGCCCCTATaGTTCAATTATCTCCCACCAGGTCCCTCCCACAAT +
Preference number: 3 (lower is better)
Translates to: TTTRTVWEKLPL*FNYLPPGPSHN
Trigger: ATTGTGGGAGGGACCTGGTGGGAGATAATTGAATCATAGGGGCAGTTTCTCCCATACTGTTCTGGTGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp CTCCCACTGGGTCCTTCCCACAACACATGGCAATTATaGGAGCTACAATTCAAGATGAGTTTTAGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: LPLGPSHNTWQL*ELQFKMSFRWG
Trigger: TCCCCACCTAAAACTCATCTTGAATTGTAGCTCCCATAATTGCCATGTGTTGTGGGAAGGACCCAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp ATGGGAGGCACTGCTGCAAAGGTCTCTGACATGCCCTaGAGACATTTTCCCCATGTCTTAGTGATTAACATT +
Preference number: 3 (lower is better)
Translates to: MGGTAAKVSDMP*RHFPHVLVINI
Trigger: AATGTTAATCACTAAGACATGGGGAAAATGTCTGCAGGGCATGTCAGAGACCTTTGCAGCAGTGCCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCTGTGGTGGGGGCTATTaGGAGACCTTAAATAAGATC +
Preference number: 3 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLCGGGY*ETLNKI
Trigger: GATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp CCTCACTCCTGTAGCAAACTTCTGCCTGGACATACATaGATTTCCATACATTCTCTGAAATCTAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: PHSCSKLLPGHT*ISIHSLKSRQR
Trigger: CCTCTGCCTAGATTTCAGAGAATGTATGGAAATGCATGTATGTCCAGGCAGAAGTTTGCTACAGGAGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp ATTTGGCCCAGGGCTGAGCCCATGTATGTACACAAATaGGTTAGTGCAGTGTTAGGAGTCTCTTCACAAATT +
Preference number: 3 (lower is better)
Translates to: IWPRAEPMYVHK*VSAVLGVSSQI
Trigger: AATTTGTGAAGAGACTCCTAACACTGCACTAACCCATTTGTGTACATACATGGGCTCAGCCCTGGGCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR-3UTR CAA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATATCAGAGCCTCAAATTaGCTCCATGCCCCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDIRASN*LHAPFL
Trigger: GAGGAAGGGGGCATGGAGCAAATTTGAGGCTCTGAT...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp AATCCAGCAGGGCAGTTAAATCTTAAAGCTCCAAAATaGTCTCCTTTGACTCCATGTCTCACATCCAGGTCA +
Preference number: 3 (lower is better)
Translates to: NPAGQLNLKAPK*SPLTPCLTSRS
Trigger: TGACCTGGATGTGAGACATGGAGTCAAAGGAGACCATTTTGGAGCTTTAAGATTTAACTGCCCTGCTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR TCA 72 bp TTCTGCCTGGACATACATGCATTTCCATACATTCTCTaGAATCTAGGCAGAGGTTCCCAAACCTCAGTTCTT +
Preference number: 3 (lower is better)
Translates to: FCLDIHAFPYIL*NLGRGSQTSVL
Trigger: AAGAACTGAGGTTTGGGAACCTCTGCCTAGATTTCAGAGAATGTATGGAAATGCATGTATGTCCAGGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp ACAAGTTCCTCATCGCTATCTGAGACCAACTCAGCCTaGATTTCATGTCCCAATCATTATCAGCATTTTGGT +
Preference number: 3 (lower is better)
Translates to: TSSSSLSETNSA*ISCPNHYQHFG
Trigger: ACCAAAATGCTGATAATGATTGGGACATGAAATCCAGGCTGAGTTGGTCTCAGATAGCGATGAGGAACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp CAATTATGGGAGCTACAATTTAAGGTGATATTTGGATaGGGACACAGCCAAACCATATCATTCTCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: QLWELQFKVIFG*GHSQTISFSPW
Trigger: CCAGGGAGAGAATGATATGGTTTGGCTGTGTCCCCATCCAAATATCACCTTAAATTGTAGCTCCCATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp ATTCAATTATCTCCCACCAGGTCCCTCCCACAATTATaGGAGCTACAATTTAAGGTGATATTTGGATGGGGA +
Preference number: 3 (lower is better)
Translates to: IQLSPTRSLPQL*ELQFKVIFGWG
Trigger: TCCCCATCCAAATATCACCTTAAATTGTAGCTCCCATAATTGTGGGAGGGACCTGGTGGGAGATAATTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp TTCAATTATCTCCCACTGGGTCCTTCCCACAACACATaGCAATTATGGGAGCTACAATTCAAGATGAGTTTT +
Preference number: 3 (lower is better)
Translates to: FNYLPLGPSHNT*QLWELQFKMSF
Trigger: AAAACTCATCTTGAATTGTAGCTCCCATAATTGCCATGTGTTGTGGGAAGGACCCAGTGGGAGATAATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp AGCCTGGATTTCATGTCCCAATCATTATCAGCATTTTaGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: SLDFMSQSLSAF*SKPFNKSLGSP
Trigger: GGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGATAATGATTGGGACATGAAATCCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CCA 72 bp TGCAGACATTTTCCCCATGTCTTAGTGATTAACATTTaGCTCCTTGTTACTTATGCAAATTTCTGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: CRHFPHVLVINI*LLVTYANFCRG
Trigger: CCCCCTGCAGAAATTTGCATAAGTAACAAGGAGCCAAATGTTAATCACTAAGACATGGGGAAAATGTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR GCA 72 bp ATTAACATTTGGCTCCTTGTTACTTATGCAAATTTCTaGAGGGGGCTTGAATTTATCCTCAGAAAATGGGTT +
Preference number: 3 (lower is better)
Translates to: INIWLLVTYANF*RGLEFILRKWV
Trigger: AACCCATTTTCTGAGGATAAATTCAAGCCCCCTGCAGAAATTTGCATAAGTAACAAGGAGCCAAATGTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTACCCAAGAACATGGCGTaGTCCACGGCCCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLPKNMA*STARPG
Trigger: GCCGGGCCGGGCCGTGGAGCACGCCATGTTCTTGGG...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCCGTCGCCCAAGAACATaGCGTGCTCCACGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTRRPRT*RAPRPG
Trigger: GCCGGGCCGTGGAGCACGCCATGTTCTTGGGCGACG...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GTCCTGGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTCGGTAGCTCAGCTCTaGCGCTGCGGCGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: VLGKPPGRRLAQQSEPQISVAQL*RCGAAG
Trigger: GCCGGCCGCGCCGCAGCGCCAGAGCTGAGCTACCGA...AATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGCAGCGAGCGCTCCGTaGTGTTCCAGCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSAASAP*CSSPGG
Trigger: TCCACCTGGGCTGGAACAGCACGGAGCGCTCGCTGC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCTCGCGGGCCTTTGGGTaGGTGAAGTCTAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTSRAFG*VKSSTA
Trigger: CGCGGTGCTAGACTTCACGCACCCAAAGGCCCGCGA...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGGGCGCGGCCGGCGGGTaGCTTGTAGGGCGTGTCGTG +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVGAAGG*LVGRVV
Trigger: CACGACACGCCCTACAAGCCACCCGCCGGCCGCGCC...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTACGCCCGCGTCGAACTTaGAGGAAGCCACGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLRPRRT*RKPRSS
Trigger: GCTACTCCGTGGCTTCCTTCAAGTTCGACGCGGGCG...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACAGGGCGGCGAACTTCTaGGCGATGGCCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDRAANF*AMATTS
Trigger: GGAAGTGGTGGCCATCGCGCAGAAGTTCGCCGCCCT...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TTGTCAGCCAAACACCTCCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGGCGCCACCATACCAGTaGGCCGCCGCGTCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSAKHLPSWTGTKSATVQAPPYQ*AAASPK
Trigger: CTTGGGCGACGCGGCGGCCCACTGGTATGGTGGCGC...CTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGGCCATCCAGGCGGATaGGCCAGTGTTGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSGHPGG*ASVASS
Trigger: TGAGGACGCAACACTGGCCCATCCGCCTGGATGGCC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATGGCTGGGGCTCCTGCTaGCCATCCAGGCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHGWGSC*PSRRMG
Trigger: GCCCATCCGCCTGGATGGCCAGCAGGAGCCCCAGCC...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACGCAGCCCGTCGGCCGTaGGCGAGCAGCCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHAARRP*ASSPAG
Trigger: CCCTGCTGGGCTGCTCGCTCACGGCCGACGGGCTGC...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAGGGTGCTGGCACCCTTaGCGGCTTGTTGAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLGCWHP*RLVEVA
Trigger: CGCTACTTCAACAAGCCGTCAAGGGTGCCAGCACCC...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCACAGCTCCACGTGGCTaGGGAGGCCTCACAAGCATG +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVTAPRG*GGLTSM
Trigger: CATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGT...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCCCCTTGACGGCTTGTTaGAGTAGCGACGCACCATGT +
Preference number: 4 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTPLTAC*SSDAPC
Trigger: ACATGGTGCGTCGCTACTTCAACAAGCCGTCAAGGG...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGCCCGCGGCAGGTAGCTaGCCTCGCCCGCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: GSCQCVHVACVQKHRPPEPAAGS*PRPRRT
Trigger: AGTTCGACGCGGGCGAGGTCAGCTACCTGCCGCGGG...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCGAAGTCGCTCCGCCTTaGGTAGGGAGACGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVEVAPP*VGRRCS
Trigger: ACTACAGCGTCTCCCTACGCAAGGCGGAGCGACTTC...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGAGTAGCGCTCGAGGATaGCCCCAAACGCGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRSSARG*PQTRRR
Trigger: CCGACGCCGCGTTTGGGGGCATCCTCGAGCGCTACT...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGCTGGTGACGAACGGCTaGGGCTCCTGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVLVTNG*GSCWPS
Trigger: GGATGGCCAGCAGGAGCCCCAGCCGTTCGTCACCAG...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCCGTACAGCGCCCATGTaGACCAAATGGGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVRTAPM*TKWGLG
Trigger: TCCGAGACCCCATTTGGTCCACATGGGCGCTGTACG...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TTGTCAGCCAAACACCTCCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGCGCCGCAGGTGTCCCTaGAACCAGTCGCGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSAKHLPSWTGTKSATVQRRRCP*NQSRAF
Trigger: AAAGGCCCGCGACTGGTTCCAGGGACACCTGCGGCG...CTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGGCGGTTACCGGGCCCTaGGCTGGGTCAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: GSCQCVHVACVQKHRPPEAVTGP*AGSGRP
Trigger: TGGGCGTCCTGACCCAGCCCAGGGCCCGGTAACCGC...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACGGTCTGCATGAAGACTaGGGGCTTTGCGGTTACCGG +
Preference number: 4 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDGLHED*GLCGYR
Trigger: CCGGTAACCGCAAAGCCCCCAGTCTTCATGCAGACC...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTACCTCCCCAGCTGGACTaGGACCAAATCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLPPQLD*DQISHS
Trigger: ACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGG...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCAAACACCTCCCCAGCTaGACTGGGACCAAATCAGCC +
Preference number: 4 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTKHLPS*TGTKSA
Trigger: GGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTT...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGAAGTCTGGCCTGCATaGCCCTGCAAGTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSEVWPA*PCKSVP
Trigger: GGGAACAGACTTGCAGGGCCATGCAGGCCAGACTTC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGTGGGGCCATCTGACTaGGTTCATCTCAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSVGPSD*VHLNLL
Trigger: GAGCAGGTTGAGATGAACTCAGTCAGATGGCCCCAC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATGCCGCACAGTCTGGATaGAGAAGTGCAGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHAAQSG*RSAAAA
Trigger: GGCTGCCGCTGCACTTCTTCATCCAGACTGTGCGGC...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGCAGCCACAGTTCAGGTaGGTGCTGGGGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVQPQFR*VLGTQG
Trigger: GCCCTGAGTCCCCAGCACTCACCTGAACTGTGGCTG...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GTCCTGGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTGGGGTTGCAGTGAGCTaGTTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VLGKPPGRRLAQQSEPQIGVAVS*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCAGCTCACTGCAACCCC...AATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGGCCCCATGCAAGTCTaGAATCCAGCAGGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSGPMQV*NPAGQL
Trigger: TAACTGCCCTGCTGGATTTCAGACTTGCATGGGGCC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCTCGTCGATTTCCAGGTaGCTGCTGTTGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTSSISR*LLLKWC
Trigger: GCACCACTTCAACAGCAGCCACCTGGAAATCGACGA...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGGGAGGTGGGTTCCCATaGTCTTGGGCAGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVGGGFP*SWAAPP
Trigger: GGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCC...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTGTCAGCCAAACACCTCCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGCCAGGTGGCTGCTGTTaGAGTGGTGCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LSAKHLPSWTGTKSATVQPGGCC*SGAGGS
Trigger: AGATCCGCCTGCACCACTTCAACAGCAGCCACCTGG...CTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGGTGCACCCAGAGCGTaGCGCGGAAGCCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMGAPRA*RGSRRR
Trigger: GCGACGCCGGCTTCCGCGTCACGCTCTGGGTGCACC...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACGCGACGAGTTGTAGTTaGCAAAAGGGTGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDATSCS*QKGAPR
Trigger: TCTGGGTGCACCCTTTTGTCAACTACAACTCGTCGC...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCCATTTGGCCCAGGGCTaGGCCCATGTATGTACACAA +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVHLAQG*AHVCTQ
Trigger: TTGTGTACATACATGGGCTCAGCCCTGGGCCAAATG...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCCTCAACCTGCTCCATTaGAGTTACAGCCCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVLNLLH*SYSPAE
Trigger: TTCTGCCGGGCTGTAACTGCAATGGAGCAGGTTGAG...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATCAGAGCCTCAAATTTaGTCCATGCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLSEPQI*SMPPSS
Trigger: GGAGGAAGGGGGCATGGAGCAAATTTGAGGCTCTGA...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCCCTTCTGATTGCGGATaGAGAAGCCGCCAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVPSDCG*RSRQLS
Trigger: TGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGG...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATGTTCCTGGGAGTACATaGTGCGGGTGTGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHVPGST*CGCDGG
Trigger: CCCTCCGTCACACCCGCACCATGTACTCCCAGGAAC...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAGAGGTTTCTGCAGATTaGTGTGAGTGTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLEVSAD*CECGGG
Trigger: TCCACCCCCACACTCACACCAATCTGCAGAAACCTC...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGCCCATCAGGCACATTTaGCCCAGGGCTGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRPIRHI*PRAEPM
Trigger: CATGGGCTCAGCCCTGGGCCAAATGTGCCTGATGGG...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCGCGCTTGAACCAGAGTaGAGCTGCCGCCGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCALEPE*SCRRAA
Trigger: CGCGGCGCGGCGGCAGCTTCACTCTGGTTCAAGCGC...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTGTCAGCCAAACACCTCCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGGGCCGTGGGGCCATCTaGCTGAGTTCATCTCAACCT +
Preference number: 4 (lower is better)
Translates to: LSAKHLPSWTGTKSATVQGRGAI*LSSSQP
Trigger: AGGTTGAGATGAACTCAGTCAGATGGCCCCACGGCC...CTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCGCGGCCGGTAGGTGCTaGAGTCCCGCGGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLAAGRC*SPAAGS
Trigger: GCTACCTGCCGCGGGACTTCAGCACCTACCGGCCGC...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTGTCAGCCAAACACCTCCCCAGCTGGACTGGGACCAAATCAGCCACAGTTCAGGGTTCAAGGTCTGCATaGAGACTGGGGGCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LSAKHLPSWTGTKSATVQGSRSA*RLGALR
Trigger: CCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAACC...CTGAACTGTGGCTGATTTGGTCCCAGTCCAGCTGGGGAGGTGTTTGGCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGTACATGGTGCGGGTGTaGCGGAGGGTTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRYMVRV*RRVQGL
Trigger: CAGACCTTGAACCCTCCGTCACACCCGCACCATGTA...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGAGGCCTCCAGGCCTGTaGTGGGAGGCACTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GSCQCVHVACVQKHRPPERPPGL*WEALLQ
Trigger: TTGCAGCAGTGCCTCCCATCACAGGCCTGGAGGCCT...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCGCAGACAAGAGAGAATaGGAGCCAAGCAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSADKRE*EPSKRG
Trigger: TCCCCTTTTGCTTGGCTCTCATTCTCTCTTGTCTGC...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACGGGGTTCTGACGGTATaGGTAGCAGCCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHGVLTV*VAARPA
Trigger: CGCCGGCCTGGCTGCTACGCATACCGTCAGAACCCC...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGTGGCCTGCATGGCCCTaGAAGTCTGTTCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRWPAWP*KSVPIR
Trigger: CCTGATGGGAACAGACTTGCAGGGCCATGCAGGCCA...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATTTGGGCCGCACAGTCTaGATGAAGAAGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHLGRTV*MKKCSG
Trigger: GCCGCTGCACTTCTTCATCCAGACTGTGCGGCCCAA...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATAGTCCTCCTGTTCCCTaGGAGGGGATCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHSPPVP*EGISCL
Trigger: GAGGCAAGAGATCCCCTCCCAGGGAACAGGAGGACT...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGTTCCTACGAGAGTCCTaGGGAAACCGCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVFLRES*GNRLGG
Trigger: TCCTCCCAGGCGGTTTCCCCAGGACTCTCGTAGGAA...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp TGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTaGCTCCATGCCCCCTTCCTCCAGATCATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WEEAGSAIRASN*LHAPFLQIIQP
Trigger: AGGCTGGATGATCTGGAGGAAGGGGGCATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCGCACGCGGTAGCACATaGCCGTGTCCTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSARGST*PCPWAA
Trigger: TGCGGCCCAAGGACACGGTCATGTGCTACCGCGTGC...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGGATGGAGGTGACGTCTaGGCCCACGCACACTCGGTA +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVDGGDV*AHAHSV
Trigger: TACCGAGTGTGCGTGGGCTCAGACGTCACCTCCATC...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGCCATATCGGGTAGGATaGATGGGTAGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVPYRVG*MGSPAC
Trigger: GCATGCTGGGCTACCCATTCATCCTACCCGATATGG...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCGGTCACCCGTGTCGGTaGCCTCGCCCGCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCGHPCR*PRPPAQ
Trigger: TTGAGCTGGCGGGCGAGGTCACCGACACGGGTGACC...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCCTAGCACCGCGCCGATaGCGTTCCACCAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSLAPRR*RSTSAP
Trigger: TGGTGCGCTGGTGGAACGGCATCGGCGCGGTGCTAG...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTGCTCACCCTTGTAGCTaGGCCACTTGCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSAHPCS*ATCRRA
Trigger: TGCCCGCCGGCAAGTGGCGCAGCTACAAGGGTGAGC...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACAGGAGATTGCTTCAGTaGCCCCTCCCTAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYRRLLQ*PLPRPH
Trigger: GTGGGGCCTAGGGAGGGGGCACTGAAGCAATCTCCT...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACCTTTCCAGGTGCATGGTaGAAGCTGTCAGTGGATATA +
Preference number: 4 (lower is better)
Translates to: EQLGCMVPSPWAAHSKGTFPGAW*KLSVDI
Trigger: TATATCCACTGACAGCTTGCACCATGCACCTGGAAA...GGTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGGAAAGGAGCGGGCCGTaGGGCCATCTGACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVERSGP*GHLTEF
Trigger: GAACTCAGTCAGATGGCCCCACGGCCCGCTCCTTTC...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGCCCATGTGGACCAAATaGGGTCTCGGAAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVPMWTK*GLGRPR
Trigger: CCGAGGCCTTCCGAGACCCCATTTGGTCCACATGGG...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCCCAAACCATATCAGGTaGGGAAACGGATGCATTCTC +
Preference number: 4 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSPNHIR*GNGCIL
Trigger: GAGAATGCATCCGTTTCCCCACCTGATATGGTTTGG...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACATCACCAGAACAGTATaGCGGAAACTGCCCCCATAT +
Preference number: 4 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDITRTV*RKLPPY
Trigger: ATATGGGGGCAGTTTCCGCCATACTGTTCTGGTGAT...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGGGCCTTTGGGTGCGTaGAGTCTAGCACCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMGPLGA*SLAPRR
Trigger: TCGGCGCGGTGCTAGACTTCACGCACCCAAAGGCCC...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCCGACCGGGTAATCGGTaGGCAGCACCGGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSRPGNR*AAPASC
Trigger: ACAAGACGCCGGTGCTGCTCACCGATTACCCGGTCG...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GTCCTGGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTCTCCAAAGTCTCATCTaGAACAAGGCAAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLGKPPGRRLAQQSEPQILQSLI*NKASPF
Trigger: GAAGGGACTTGCCTTGTTTCAGATGAGACTTTGGAG...AATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCAACCATCAGATCTCGTaGGACTTATTCACTACCACC +
Preference number: 4 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVNHQIS*DLFTTT
Trigger: GGTGGTAGTGAATAAGTCTCACGAGATCTGATGGTT...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCGTCTGGATGAAGAAGTaGAGCGGCAGCCCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSVWMKK*SGSPSA
Trigger: GGCCGACGGGCTGCCGCTGCACTTCTTCATCCAGAC...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGAACGGCTGGGGCTCCTaGTGGCCATCCAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMNGWGS*WPSRRM
Trigger: CATCCGCCTGGATGGCCAGCAGGAGCCCCAGCCGTT...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGGGCGGGATAGAGAACTaGATGGCCGGCATAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVGGIEN*MAGIKA
Trigger: CGCCTTTATGCCGGCCATGCAGTTCTCTATCCCGCC...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGAAGACTGGGGGCTTTaGGGTTACCGGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMEDWGL*GYRALG
Trigger: GCCCAGGGCCCGGTAACCGCAAAGCCCCCAGTCTTC...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGGGAGGGTTCAAGGTCTaGATGAAGACTGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVGGFKV*MKTGGF
Trigger: AAAGCCCCCAGTCTTCATGCAGACCTTGAACCCTCC...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACCACAGTTCAGGTGAGTaGTGGGGACTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHHSSGE*WGLRAW
Trigger: CCAGGCCCTGAGTCCCCAGCACTCACCTGAACTGTG...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTCGCCTGGGAGGAGGCTaGCTCAGCAATCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSRLGGG*LSNQSL
Trigger: GAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCG...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATTGCTTCCACATTTTTaGGTATTTACAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLLLPHF*VFTAAP
Trigger: GGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAA...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp GCTCAACACTACGTGGAAGATGCCAAGACTTGGGGCTaGCACCCTCTGAAGCCAAGGCCTGAGCTGTATCTT +
Preference number: 4 (lower is better)
Translates to: AQHYVEDAKTWG*HPLKPRPELYL
Trigger: AAGATACAGCTCAGGCCTTGGCTTCAGAGGGTGCAAGCCCCAAGTCTTGGCATCTTCCACGTAGTGTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp GTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATaGCAGGGTACAGCCTACTTCTCGGTTGCTTTTACA +
Preference number: 4 (lower is better)
Translates to: VPMVLGSSTPMA*QGTAYFSVAFT
Trigger: TGTAAAAGCAACCGAGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACGCCTGGCTCTTCTCCTaGGGGTTCTGGAGCATTAGT +
Preference number: 4 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYAWLFS*GFWSIS
Trigger: ACTAATGCTCCAGAACCCTCAGGAGAAGAGCCAGGC...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACACCTGCTCTCCCTTCTaGTTGCGGATGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHTCSPF*LRMEKP
Trigger: CGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGT...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCAGTAGACATCGCTGGTaGCGAACGGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSSRHRW*RTAGAP
Trigger: AGGAGCCCCAGCCGTTCGTCACCAGCGATGTCTACT...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCGGGGCTTGCACCCTCTaGAGCCAAGGCCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCGACTL*SQGLSC
Trigger: ACAGCTCAGGCCTTGGCTTCAGAGGGTGCAAGCCCC...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACGCTCTCCCTTCTGATTaGGGATGGAGAAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHALPSD*GWRSRQ
Trigger: CTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGC...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGCTCAAGCAACAGCGGTaGCACAAGCGAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMLKQQR*HKRGPQ
Trigger: CTGCGGGCCTCGCTTGTGGCACCGCTGTTGCTTGAG...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCCGTCGCGCTCCTGCTTaGCTGGCTCCAGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGRRAPA*LAPAPG
Trigger: CCCCGGTGCTGGAGCCAGGCAAGCAGGAGCGCGACG...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGTGGCTGCTGTTGAAGTaGTGCAGGCGGATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVWLLLK*CRRICW
Trigger: CCAACAGATCCGCCTGCACCACTTCAACAGCAGCCA...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTCGAACTTCTGCGCGATaGCCACCACTTCCGCGTCGT +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSRTSAR*PPLPRR
Trigger: ACGACGCGGAAGTGGTGGCCATCGCGCAGAAGTTCG...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GTCCTGGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTGAGACCAACTCAGCCTaGATTTCATGTCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: VLGKPPGRRLAQQSEPQIETNSA*ISCPNH
Trigger: ATGATTGGGACATGAAATCCAGGCTGAGTTGGTCTC...AATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGAGGCTCAACACTACGTaGAAGATGCCAAGACTTGGG +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRRLNTT*KMPRLG
Trigger: CCCAAGTCTTGGCATCTTCCACGTAGTGTTGAGCCT...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GTCCTGGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTGCAGCTGAGGAATCTTaGAAGGGCTATTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VLGKPPGRRLAQQSEPQIAAEES*KGYLFP
Trigger: AGGAAATAAATAGCCCTTTCAAGATTCCTCAGCTGC...AATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAAGCTACAATTTAAGGTaGTATTTGGATGGGGACACA +
Preference number: 4 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLSYNLR*YLDGDT
Trigger: TGTGTCCCCATCCAAATATCACCTTAAATTGTAGCT...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGAAGGTGTACATAGCTaGGGCTGCGATGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMEGVHS*GCDGLG
Trigger: CCCGAGGCCATCGCAGCCGCAGCTATGTACACCTTC...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTGGGCGCCATCGCGGCTaGAGGAGTCAAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSGRHRG*RSQGPA
Trigger: CGCTGGACCTTGACTCCTGCAGCCGCGATGGCGCCC...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGCTGGGGCACGGCGTTaGCGCCCACCATATCGGGTA +
Preference number: 4 (lower is better)
Translates to: KLFQPLPVTQFQSCFHIFAGARR*RPPYRV
Trigger: TACCCGATATGGTGGGCGGCAACGCCGTGCCCCAGC...AAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACACCCAGTTCCAAAGTTaGTTCCACATTTTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDTQFQS*FHIFGY
Trigger: ATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGT...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCGCAGCACCTTGTCCTaGTCCACGGCGCGCCCGTAC +
Preference number: 4 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSRSTLS*STARPY
Trigger: GTACGGGCGCGCCGTGGACCAGGACAAGGTGCTGCG...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCCCCACCGACCCGCTCTaGCATGCCACTTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLPTDPL*HATFLQ
Trigger: CTGGAGAAAAGTGGCATGCCAGAGCGGGTCGGTGGG...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCACAGCAAGGGGACCTTaGGCCTGGCCCACAAAACCA +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSTARGP*AWPTKP
Trigger: TGGTTTTGTGGGCCAGGCCCAAGGTCCCCTTGCTGT...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGCTTGGGCTTGGCAGGTaGGAAGTTGTCGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMLGLGR*EVVGQE
Trigger: TTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAG...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGCAGGAGATGTTCTGTaGCTGGTAGCCTACGCGCAC +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMAGDVL*LVAYAH
Trigger: GTGCGCGTAGGCTACCAGTCACAGAACATCTCCTGC...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCTGCGAGTCGATACGGTaGGCTGTCTCGTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSCESIR*AVSSPG
Trigger: GCCCGGCGACGAGACAGCTCACCGTATCGACTCGCA...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTTGCTCCATACCCAAGTCACCTCATaGATGCTTTGCTGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: ETAWEEAGSAIRASNLLHTQVTS*MLCCLE
Trigger: TTCTAAGCAGCAAAGCATTCATGAGGTGACTTGGGT...ATGGAGCAAATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGCAAAATGGTCTCCTTTaGCTCCATGTCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRQNGLL*LHVSHP
Trigger: TGGATGTGAGACATGGAGTCAAAGGAGACCATTTTG...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTCGGATGGGCCAGTGTTaGGTCCTCATCTCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: KLFQPLPVTQFQSCFHIFRMGQC*VLISAP
Trigger: TGGCGCCGAGATGAGGACGCAACACTGGCCCATCCG...AAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCGCACGAAGTCTGGCCTaGATGGCCCTGCAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLARSLA*MALQVC
Trigger: ACAGACTTGCAGGGCCATGCAGGCCAGACTTCGTGC...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACAAGAAGGTAGAGGAGTaGTGTATTAGTCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDKKVEE*CISLFS
Trigger: TGAAAACAGACTAATACACCACTCCTCTACCTTCTT...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp TACAGCCTACTTCTCGGTTGCTTTTACAGGCTGGCGTaGAGTGTCTGTGGCTTTTCCAGGTGCATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: YSLLLGCFYRLA*SVCGFSRCMVQ
Trigger: TTGCACCATGCACCTGGAAAAGCCACAGACACTCAACGCCAGCCTGTAAAAGCAACCGAGAAGTAGGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATCGGCAGAAGCGGGGGTaGAAGAGCTTCCCGCCGATC +
Preference number: 4 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDRQKRG*KSFPPI
Trigger: GATCGGCGGGAAGCTCTTTCACCCCCGCTTCTGCCG...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATCACCGCGGGGATGAGTaGGCGCAACCCCAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDHRGDE*AQPQVV
Trigger: TACGACCTGGGGTTGCGCTCACTCATCCCCGCGGTG...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGGGAAGAGAAAATGGCTaGGATGAAAGACCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSCQCVHVACVQKHRPPEGRENG*DERPSP
Trigger: AGGGGAAGGTCTTTCATCTCAGCCATTTTCTCTTCC...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACTGCTACCAGAGCTGTTaGTGGAAGCTAAAGTTCACC +
Preference number: 4 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYCYQSC*WKLKFT
Trigger: GGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCA...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGTTTCCATACATTCTCTaGAATCTAGGCAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRFPYIL*NLGRGS
Trigger: GGAACCTCTGCCTAGATTTCAGAGAATGTATGGAAA...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGTACATAGCTGCGGCTaGGATGGCCTCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KLFQPLPVTQFQSCFHIFVHSCG*DGLGVL
Trigger: CAGAACCCCGAGGCCATCGCAGCCGCAGCTATGTAC...AAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCGTTGGAGCAGGAGATTaGTTCAGTGCCCCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCVGAGD*FSAPSL
Trigger: TAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAAC...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGCCTAGGAGGAGGGGTTaGAGTGAGCTGATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMPRRRG*SELIVP
Trigger: TGGCACAATCAGCTCACTGCAACCCCTCCTCCTAGG...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGCAGTATGGCGGAAACTaGCCCCATATTTCAATTATC +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVQYGGN*PHISII
Trigger: GATAATTGAAATATGGGGGCAGTTTCCGCCATACTG...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACACACTACGTGGAAGATaGCAAGACTTGGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHTLRGR*QDLGLA
Trigger: TGCAAGCCCCAAGTCTTGGCATCTTCCACGTAGTGT...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTCCACCCCTATGGCATTaGAGGGTACAGCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSPPLWH*RVQPTS
Trigger: AGAAGTAGGCTGTACCCTGCAATGCCATAGGGGTGG...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCTGCAGGCGGATCTGTTaGGCAAAACGCAGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLCRRIC*AKRSTL
Trigger: CAAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCA...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTCAGGTAACCGGCCCGTaGGTTCGCGCACGAACAGCT +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSQVTGP*VRARTA
Trigger: AGCTGTTCGTGCGCGAACCCACGGGCCGGTTACCTG...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGAGTCCCCACCTAAGATaGACAAAGATGGCCACGAAA +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVSPHLR*TKMATK
Trigger: TTTCGTGGCCATCTTTGTCCATCTTAGGTGGGGACT...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGTTAAGGCACGAAGTCTaGCCTGCATGGCCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMLRHEV*PAWPCK
Trigger: CTTGCAGGGCCATGCAGGCCAGACTTCGTGCCTTAA...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATCCGATCCCCTGCGCTTaGACCAGAGTGAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDPIPCA*TRVKLP
Trigger: CGGCAGCTTCACTCTGGTTCAAGCGCAGGGGATCGG...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCCAGGTGGAAGGGCACTaGGTCATTGACTTTGATGGC +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCQVEGH*VIDFDG
Trigger: GCCATCAAAGTCAATGACTCAGTGCCCTTCCACCTG...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCCTGGGAGTACATGGTaGGGGTGTGACGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSPGSTW*GCDGGF
Trigger: GAACCCTCCGTCACACCCGCACCATGTACTCCCAGG...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGTGGGAGGGGATCTCTTaGCTCCTTGTCAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMWEGIS*LLVSQT
Trigger: TGTTTGGCTGACAAGGAGGCAAGAGATCCCCTCCCA...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTGTCTCTGACATGCCCTaGAGACATTTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSVSDMP*RHFPHV
Trigger: GACATGGGGAAAATGTCTGCAGGGCATGTCAGAGAC...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGTTTAAAAATCAATCATaGCTTCCCAACAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVFKNQS*LPNSPP
Trigger: TGGGGGACTGTTGGGAAGGCATGATTGATTTTTAAA...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGGTCTTTGGAAGGCTTaGGCTTGGCAGGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMGLWKA*AWQVRS
Trigger: ACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACC...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTGCGGCTTCAGGTCTTTaGAAGGCTTGGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KLFQPLPVTQFQSCFHIFAASGL*KAWAWQ
Trigger: CTGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGC...AAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCCGCACCATGTACTTGTaGATGGAGGTGACGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCRTMYL*MEVTSE
Trigger: CTCAGACGTCACCTCCATCCACAAGTACATGGTGCG...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACGTAAGGATTGTGCGTTaGAGCAGGAGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHVRIVR*SRRLLQ
Trigger: CTGAAGCAATCTCCTGCTCCAACGCACAATCCTTAC...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACGGTGCAAGCTGTCAGTaGATATACCATTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYGASCQ*IYHSDV
Trigger: GACATCAGAATGGTATATCCACTGACAGCTTGCACC...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp AAACGGATGCATTCTCTAGGGGGTAGGGGACTGGTTTaGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KRMHSLGGRGLV*LPELLMEAKVH
Trigger: GTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCCCCTACCCCCTAGAGAATGCATCCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp TGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTaGGGTATTTACAGCAGCGCCCCACTCTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: CLLPSSKVASTF*GIYSSAPLYWY
Trigger: GTACCAGTAGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp ACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTaGCTTCCACATTTTTGGGTATTTACAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: TVPTSACYPVPK*LPHFWVFTAAP
Trigger: GGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
3UTR CAA 72 bp GCATTGGCTAAATACACCCATTTCAAGTGGGAGAAGTaGGCCAAAACGAAGTGGCTAAAGGCCCCATGCAAG +
Preference number: 4 (lower is better)
Translates to: ALAKYTHFKWEK*AKTKWLKAPCK
Trigger: CTTGCATGGGGCCTTTAGCCACTTCGTTTTGGCCAACTTCTCCCACTTGAAATGGGTGTATTTAGCCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTACTTGTGGATGGAGGTaGCGTCTGAGCCCACGCACA +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSTCGWR*RLSPRT
Trigger: TGTGCGTGGGCTCAGACGTCACCTCCATCCACAAGT...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCGAGGAGGGGTTGCAGTaGGCTGATTGTGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSEEGLQ*ADCATA
Trigger: TGCAGTGGCACAATCAGCTCACTGCAACCCCTCCTC...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCTGTAGCTGCGCCACTTaGCGGCGGGCAAATAGACGT +
Preference number: 4 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSCSCAT*RRANRR
Trigger: ACGTCTATTTGCCCGCCGGCAAGTGGCGCAGCTACA...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGCCTGTAGCAAACTTCTaGCTGGACATACATGCATTT +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVPVANF*LDIHAF
Trigger: AAATGCATGTATGTCCAGGCAGAAGTTTGCTACAGG...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCCAGCCACTTAATGGGTaGTATAGAGGTGGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCQPLNG*YRGGRF
Trigger: GAACCTCCCACCTCTATACCACCCATTAAGTGGCTG...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCAGTTCAGGTGAGTGCTaGGGACTCAGGGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGSSGEC*GLRAWL
Trigger: AAGCCAGGCCCTGAGTCCCCAGCACTCACCTGAACT...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCCTTAGAAAGAGAAAATaGCTGGCGTGGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSLRKRK*LAWWLM
Trigger: CATGAGCCACCACGCCAGCCATTTTCTCTTTCTAAG...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGAAGATGAGTTTTAGGTaGGGACACAGCCAAACCATA +
Preference number: 4 (lower is better)
Translates to: GSCQCVHVACVQKHRPPEKMSFR*GHSQTI
Trigger: TATGGTTTGGCTGTGTCCCCACCTAAAACTCATCTT...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATACATCCAGGTCACACTaGTGCAGGAGGTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDTSRSH*CRRWVP
Trigger: GGGAACCCACCTCCTGCATCAGTGTGACCTGGATGT...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AGTGCAGTGTTAGGAGTCTCTTCACAAATTGGGAACATGATGATGGCTCTGTGCGAGTTCATCTCAACCTaGTCCATTGCAGTTACAGCC +
Preference number: 4 (lower is better)
Translates to: SAVLGVSSQIGNMMMALCEFIST*SIAVTA
Trigger: GGCTGTAACTGCAATGGAGCAGGTTGAGATGAACTC...GCACAGAGCCATCATCATGTTCCCAATTTGTGAAGAGACTCCTAACACTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTCTGCTGTTGAAGTGGTaGAGGCGGATCTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSLLLKW*RRICWA
Trigger: TGCCCAACAGATCCGCCTGCACCACTTCAACAGCAG...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCCTCAAATTTGCTCCATaGCCCCTTCCTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLLKFAP*PLPPDH
Trigger: ATGATCTGGAGGAAGGGGGCATGGAGCAAATTTGAG...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGAGTCTCTTCACAAATTaGGAACATGATGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: SATQSLEPRRRGCSELIVSLFTN*EHDDGS
Trigger: AGAGCCATCATCATGTTCCCAATTTGTGAAGAGACT...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTTCAATTATCTCCCACTaGGTCCTTCCCACAACACAT +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSSIISH*VLPTTH
Trigger: ATGTGTTGTGGGAAGGACCCAGTGGGAGATAATTGA...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCCCAAACCTCAGTTCTTaGCTTCTGTGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGPNLSS*LLCTCR
Trigger: CCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGG...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTAAGGTGATATTTGGATaGGGACACAGCCAAACCATA +
Preference number: 4 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSKVIFG*GHSQTI
Trigger: TATGGTTTGGCTGTGTCCCCATCCAAATATCACCTT...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTGGCGTTGGGGAATTTaGCCTCATCGAAGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSWRWGI*PHRSRS
Trigger: ACTTCGACTTCGATGAGGTCAAATTCCCCAACGCCA...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTGCTGCAAAGGTCTCTaGCATGCCCTGCAGACATTT +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSCCKGL*HALQTF
Trigger: AAATGTCTGCAGGGCATGTCAGAGACCTTTGCAGCA...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GAGGTTCCCAAACCTCAGTTCTTGACTTCTGTGCACCTGCAGGCTCAACACTACAGACATACCCGAGACTaGGTAATTTATGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: EVPKPQFLTSVHLQAQHYRHTRD*VIYEEK
Trigger: TTTTTCTTCATAAATTACCCAGTCTCGGGTATGTCT...GTAGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAACTGAGGTTTGGGAACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGAATCATCAGCTCTCATaGGATCTATTCACTATCACC +
Preference number: 4 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMNHQLS*DLFTIT
Trigger: GGTGATAGTGAATAGATCTCATGAGAGCTGATGATT...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR TCA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCGCAGGCAAGAGAGAATaGGAACTAAGCAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGAGKRE*ELSKRG
Trigger: TCCCCTTTTGCTTAGTTCTCATTCTCTCTTGCCTGC...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATCAAAGGTCTCTGACATaGCCTGCAGACATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDQRSLT*PADIFP
Trigger: GGGGAAAATGTCTGCAGGGCATGTCAGAGACCTTTG...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATTGGCTAAAGGCCCCATaGAAGTCTGAAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDWLKAP*KSEIQQ
Trigger: CTGCTGGATTTCAGACTTGCATGGGGCCTTTAGCCA...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCTGGGGACTCAGGGCCTaGCTTCTAACACTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGWGLRA*LLTLRK
Trigger: TTTTCTTAGTGTTAGAAGCCAGGCCCTGAGTCCCCA...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCATGTATGTACACAAATaGGTTAGTGCAGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSMYVHK*VSAVLG
Trigger: TCCTAACACTGCACTAACCCATTTGTGTACATACAT...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTCCTTCCCACAACACATaGCAATTATGGGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSPSHNT*QLWELQ
Trigger: TTGTAGCTCCCATAATTGCCATGTGTTGTGGGAAGG...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR GCA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTCAGTATGGGAGAAACTaGCCCTATGATTCAATTATC +
Preference number: 4 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSQYGRN*PYDSII
Trigger: GATAATTGAATCATAGGGGCAGTTTCTCCCATACTG...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CCA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCCTTAAAGCTCCAAAATaGTCTCCTTTGACTCCATGT +
Preference number: 4 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGLKAPK*SPLTPC
Trigger: ACATGGAGTCAAAGGAGACCATTTTGGAGCTTTAAG...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 90 bp CGCGTCGCCCAAGAACATGGCGTGCTCCACGGCCCGGCCCGGCGCTaGCTCCTCCCAGCGCACGCGGTAGCACATGACCGTGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RVAQEHGVLHGPARR*LLPAHAVAHDRVLG
Trigger: CCCAAGGACACGGTCATGTGCTACCGCGTGCGCTGGGAGGAGGCAGCGCCGGGCCGGGCCGTGGAGCACGCCATGTTCTTGGGCGACGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 90 bp GCACACTCGGTAGCTCAGCTCTGGCGCTGCGGCGCGGCCGGCGGGTaGCTTGTAGGGCGTGTCGTGGTAGCGCGCCTGAAGCCGCAGCGA +
Preference number: 5 (lower is better)
Translates to: AHSVAQLWRCGAAGG*LVGRVVVARLKPQR
Trigger: TCGCTGCGGCTTCAGGCGCGCTACCACGACACGCCCTACAAGCCACCCGCCGGCCGCGCCGCAGCGCCAGAGCTGAGCTACCGAGTGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297625.8
ENST00000379142.3
CDS CCA 90 bp CGCCGATGCCGTTCCACCAGCGCACCAGCGCAGGTAACCGGCCCGTaGGTTCGCGCACGAACAGCTCGCGCTCCACGCCCTCGCCGAAGC +
Preference number: 5 (lower is better)
Translates to: RRCRSTSAPAQVTGP*VRARTARAPRPRRS
Trigger: GCTTCGGCGAGGGCGTGGAGCGCGAGCTGTTCGTGCGCGAACCCACGGGCCGGTTACCTGCGCTGGTGCGCTGGTGGAACGGCATCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp GCCGCCGCAGGTGTCCCTGGAACCAGTCGCGGGCCTTTGGGTGCGTaGAGTCTAGCACCGCGCCGATGCCGTTCCACCAGCGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: AAAGVPGTSRGPLGA*SLAPRRCRSTSAPA
Trigger: CGCTGGTGCGCTGGTGGAACGGCATCGGCGCGGTGCTAGACTTCACGCACCCAAAGGCCCGCGACTGGTTCCAGGGACACCTGCGGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 90 bp CGCAGCCGCCGCAGGTGTCCCTGGAACCAGTCGCGGGCCTTTGGGTaGGTGAAGTCTAGCACCGCGCCGATGCCGTTCCACCAGCGCACC +
Preference number: 5 (lower is better)
Translates to: RSRRRCPWNQSRAFG*VKSSTAPMPFHQRT
Trigger: GGTGCGCTGGTGGAACGGCATCGGCGCGGTGCTAGACTTCACGCACCCAAAGGCCCGCGACTGGTTCCAGGGACACCTGCGGCGGCTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 90 bp GTCACCCGTGTCGGTGACCTCGCCCGCCAGCTCAAGCAACAGCGGTaGCACAAGCGAGGCCCGCAGGGCGGCGAACTTCTGCGCGATGGC +
Preference number: 5 (lower is better)
Translates to: VTRVGDLARQLKQQR*HKRGPQGGELLRDG
Trigger: GCCATCGCGCAGAAGTTCGCCGCCCTGCGGGCCTCGCTTGTGGCACCGCTGTTGCTTGAGCTGGCGGGCGAGGTCACCGACACGGGTGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 90 bp CGGATGGGCCAGTGTTGCGTCCTCATCTCGGCGCCACCATACCAGTaGGCCGCCGCGTCGCCCAAGAACATGGCGTGCTCCACGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RMGQCCVLISAPPYQ*AAASPKNMACSTAR
Trigger: CCGGGCCGTGGAGCACGCCATGTTCTTGGGCGACGCGGCGGCCCACTGGTATGGTGGCGCCGAGATGAGGACGCAACACTGGCCCATCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 90 bp GGTGTACATAGCTGCGGCTGCGATGGCCTCGGGGTTCTGACGGTATaGGTAGCAGCCAGGCCGGCGGCGGCGGGGGTAGGCCTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: GVHSCGCDGLGVLTV*VAARPAAAGVGLAL
Trigger: AAGAGCCAGGCCTACCCCCGCCGCCGCCGGCCTGGCTGCTACGCATACCGTCAGAACCCCGAGGCCATCGCAGCCGCAGCTATGTACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 90 bp CGCCAGCTTTCAGGTCCAGCAGCTCCGCGCGAAGTCGCTCCGCCTTaGGTAGGGAGACGCTGTAGTAGCACCAGGCCACCACCGCGGCCA +
Preference number: 5 (lower is better)
Translates to: RQLSGPAAPREVAPP*VGRRCSSTRPPPRP
Trigger: TGGCCGCGGTGGTGGCCTGGTGCTACTACAGCGTCTCCCTACGCAAGGCGGAGCGACTTCGCGCGGAGCTGCTGGACCTGAAAGCTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297625.8
ENST00000379142.3
CDS GCA 90 bp CGCCGGAGCGGAAGGCCAGGCGGAAGACCTGCTCTCCCTTCTGATTaGGGATGGAGAAGCCGCCAGCTTTCAGGTCCAGCAGCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: RRSGRPGGRPALPSD*GWRSRQLSGPAAPR
Trigger: GCGCGGAGCTGCTGGACCTGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGTCTTCCGCCTGGCCTTCCGCTCCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp AGCGCGCCGGAGCGGAAGGCCAGGCGGAAGACCTGCTCTCCCTTCTaGTTGCGGATGGAGAAGCCGCCAGCTTTCAGGTCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAPERKARRKTCSPF*LRMEKPPAFRSSSS
Trigger: GGAGCTGCTGGACCTGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGTCTTCCGCCTGGCCTTCCGCTCCGGCGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAACGTCGCGCTCCTGCTaGCCTGGCTCCAGCACCGGG +
Preference number: 5 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLTSRSC*PGSSTG
Trigger: CCCGGTGCTGGAGCCAGGCAAGCAGGAGCGCGACGT...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp GCCACAAGCAGCGTGTCCCCAATAAGGAACTGCGAGTCGATACGGTaGGCTGTCTCGTCGCCGGGCGCAATCCACCAAAGGGGGCGCACG +
Preference number: 5 (lower is better)
Translates to: ATSSVSPIRNCESIR*AVSSPGAIHQRGRT
Trigger: CGTGCGCCCCCTTTGGTGGATTGCGCCCGGCGACGAGACAGCTCACCGTATCGACTCGCAGTTCCTTATTGGGGACACGCTGCTTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp CTGGGAGTACATGGTGCGGGTGTGACGGAGGGTTCAAGGTCTGCATaGAGACTGGGGGCTTTGCGGTTACCGGGCCCTGGGCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: LGVHGAGVTEGSRSA*RLGALRLPGPGLGQ
Trigger: CTGACCCAGCCCAGGGCCCGGTAACCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAACCCTCCGTCACACCCGCACCATGTACTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 90 bp GCACCGGCGTCTTGTCGAAAAGCTCACCCTTGTAGCTGCGCCACTTaGCGGCGGGCAAATAGACGTCGCGCTCCTGCTTGCCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: APASCRKAHPCSCAT*RRANRRRAPACLAP
Trigger: TGGAGCCAGGCAAGCAGGAGCGCGACGTCTATTTGCCCGCCGGCAAGTGGCGCAGCTACAAGGGTGAGCTTTTCGACAAGACGCCGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 90 bp AGCGGAAGGCCAGGCGGAAGACCTGCTCTCCCTTCTGATTGCGGATaGAGAAGCCGCCAGCTTTCAGGTCCAGCAGCTCCGCGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: SGRPGGRPALPSDCG*RSRQLSGPAAPREV
Trigger: GACTTCGCGCGGAGCTGCTGGACCTGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGTCTTCCGCCTGGCCTTCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp GTTGAAGTAGCGACGCACCATGTACTTGTGGATGGAGGTGACGTCTaGGCCCACGCACACTCGGTAGCTCAGCTCTGGCGCTGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: VEVATHHVLVDGGDV*AHAHSVAQLWRCGA
Trigger: CGCGCCGCAGCGCCAGAGCTGAGCTACCGAGTGTGCGTGGGCTCAGACGTCACCTCCATCCACAAGTACATGGTGCGTCGCTACTTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTACACATGACCGTGTCCTaGGGCCGCACAGTCTGGATG +
Preference number: 5 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLHMTVS*GRTVWM
Trigger: CATCCAGACTGTGCGGCCCAAGGACACGGTCATGTG...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGGCGGATGGGCCAGTGTaGCGTCCTCATCTCGGCGCC +
Preference number: 5 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVADGPV*RPHLGA
Trigger: GGCGCCGAGATGAGGACGCAACACTGGCCCATCCGC...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTATGGCATTGCAGGGTACAGCTCCAGGTGGCTGCTGTaGAAGTGGTGCAGGCGGATC +
Preference number: 5 (lower is better)
Translates to: VGSHGLGQLHPYGIAGYSSRWLL*KWCRRI
Trigger: GATCCGCCTGCACCACTTCAACAGCAGCCACCTGGA...GCTGTACCCTGCAATGCCATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp GCCCAGCAGCGGCTTCAGGTCTTTGGAAGGCTTGGGCTTGGCAGGTaGGAAGTTGTCGGGCAGGAAGGTGTACATAGCTGCGGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: AQQRLQVFGRLGLGR*EVVGQEGVHSCGCD
Trigger: ATCGCAGCCGCAGCTATGTACACCTTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGCTGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 90 bp TTCAAGGTCTGCATGAAGACTGGGGGCTTTGCGGTTACCGGGCCCTaGGCTGGGTCAGGACGCCCAGGTAAAGTAGGCGATCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: FKVCMKTGGFAVTGP*AGSGRPGKVGDLIQ
Trigger: CTGGATGAGATCGCCTACTTTACCTGGGCGTCCTGACCCAGCCCAGGGCCCGGTAACCGCAAAGCCCCCAGTCTTCATGCAGACCTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGGCAAAACGCAGCACCTaGTCCTGGTCCACGGCGCGC +
Preference number: 5 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRAKRST*SWSTAR
Trigger: GCGCGCCGTGGACCAGGACAAGGTGCTGCGTTTTGC...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp CGGCGTCGCGCAGGCGGCGGAACATGTCGCTGGCGTTGGGGAATTTaGCCTCATCGAAGTCGAAGTCGCCATAAGCAGGTGTGTACATGT +
Preference number: 5 (lower is better)
Translates to: RRRAGGGTCRWRWGI*PHRSRSRHKQVCTC
Trigger: ACATGTACACACCTGCTTATGGCGACTTCGACTTCGATGAGGTCAAATTCCCCAACGCCAGCGACATGTTCCGCCGCCTGCGCGACGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCTTGGCAGGTGAGAAGTaGTCGGGCAGGAAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVLAGEK*SGRKVY
Trigger: GTACACCTTCCTGCCCGACAACTTCTCACCTGCCAA...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAGGCCTGAGCTGTATCTaGGCCCCTTTTAGCCATGAC +
Preference number: 5 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLGLSCI*APFSHD
Trigger: GTCATGGCTAAAAGGGGCCAAGATACAGCTCAGGCC...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CTCACAGCTCCACGTGGCTGGGGAGGCCTCACAAGCATGACAGAAAGGCACGTCAACATGTCGCTGGCGTaGGGGAATTTGACCTCATCG +
Preference number: 5 (lower is better)
Translates to: LTAPRGWGGLTSMTERHVNMSLA*GNLTSS
Trigger: CGATGAGGTCAAATTCCCCAACGCCAGCGACATGTT...GACGTGCCTTTCTGTCATGCTTGTGAGGCCTCCCCAGCCACGTGGAGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGCGTTGGAGCAGGAGATaGCTTCAGTGCCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRRWSRR*LQCPLP
Trigger: AGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACG...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GGTCACACTGATGCAGGAGGTGGGTTCCCATGGTCTTGGGCAGCTCCACCCCTAGGTAGGGGACTGGTTTaGCTACCAGAGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: GHTDAGGGFPWSWAAPPLGRGLV*LPELLM
Trigger: CATCAACAGCTCTGGTAGCAAAACCAGTCCCCTACC...TAGGGGTGGAGCTGCCCAAGACCATGGGAACCCACCTCCTGCATCAGTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CACTTAATGGGTGGTATAGAGGTGGGAGGTTCCTGGGAGTACATGGTGCGGGTGTGGGTTCCCATGGTCTaGGGCAGCTCCACCCCTATG +
Preference number: 5 (lower is better)
Translates to: HLMGGIEVGGSWEYMVRVWVPMV*GSSTPM
Trigger: CATAGGGGTGGAGCTGCCCAAGACCATGGGAACCCA...CACCCGCACCATGTACTCCCAGGAACCTCCCACCTCTATACCACCCATTAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 90 bp GCAGGTGTGTACATGTCGTCGATTTCCAGGTGGCTGCTGTTGAAGTaGTGCAGGCGGATCTGTTGGGCAAAACGCAGCACCTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGVYMSSISRWLLLK*CRRICWAKRSTLSW
Trigger: CCAGGACAAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACATGTACACACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGAGCGGCTTCAGGTCTTaGGAAGGCTTGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRSGFRS*EGLGLA
Trigger: TGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGCT...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGCGACGCACCATGTACTaGTGGATGGAGGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRRRTMY*WMEVTS
Trigger: AGACGTCACCTCCATCCACAAGTACATGGTGCGTCG...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp AGAGCAGCTGGGATGCATGGTACCAAGTCCCTGGGCTGCACACAGCAAGGGGACTTCAAGTGGGAGAAGTaGGCCAAAACGAAGTGGCTA +
Preference number: 5 (lower is better)
Translates to: RAAGMHGTKSLGCTQQGDFKWEK*AKTKWL
Trigger: TAGCCACTTCGTTTTGGCCAACTTCTCCCACTTGAA...GTCCCCTTGCTGTGTGCAGCCCAGGGACTTGGTACCATGCATCCCAGCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 90 bp CATAAGCAGGTGTGTACATGTCGTCGATTTCCAGGTGGCTGCTGTTaGAGTGGTGCAGGCGGATCTGTTGGGCAAAACGCAGCACCTTGT +
Preference number: 5 (lower is better)
Translates to: HKQVCTCRRFPGGCC*SGAGGSVGQNAAPC
Trigger: ACAAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACATGTACACACCTGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GGTAGTTGTCAGTGTGTGCATGTAGCCTGTGTTCAGAAGCACAGACCACCAGAGTCTCAACCTGCTCCATaGCAGTTACAGCCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: GSCQCVHVACVQKHRPPESQPAP*QLQPGR
Trigger: TCTGCCGGGCTGTAACTGCAATGGAGCAGGTTGAGA...CTCTGGTGGTCTGTGCTTCTGAACACAGGCTACATGCACACACTGACAACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TCAGCTACTCAATCGCTTGAACCTAGGAGGAGGGGTTGCAGTGAGCTGATTGTGAGGTCTTTGGAAGGCTaGGGCTTGGCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SATQSLEPRRRGCSELIVRSLEG*GLAGEK
Trigger: CTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCT...CACAATCAGCTCACTGCAACCCCTCCTCCTAGGTTCAAGCGATTGAGTAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TCAGCATTTTGGTCAAAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCGCTGGGGCACGGCGTaGCCGCCCACCATATCGGGT +
Preference number: 5 (lower is better)
Translates to: SAFWSKPFNKSLGSPKLSRWGTA*PPTISG
Trigger: ACCCGATATGGTGGGCGGCAACGCCGTGCCCCAGCG...GGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTTTGACCAAAATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCCACAGCAAGGGGACCTaGGGCCTGGCCCACAAAACC +
Preference number: 5 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLHSKGT*GLAHKT
Trigger: GGTTTTGTGGGCCAGGCCCAAGGTCCCCTTGCTGTG...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTAAGGGCACTGAGTCATaGACTTTGATGGCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSKGTES*TLMAAA
Trigger: CGCGGCCGCCATCAAAGTCAATGACTCAGTGCCCTT...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GGACTGGTTTTGCTACCAGAGCTGTTGATGGAAGCTAAAGTTCACCCTGTTTCCGTGCAGGCGGATCTGTaGGGCAAAACGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: GLVLLPELLMEAKVHPVSVQADL*GKTQHL
Trigger: AAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCAC...GGAAACAGGGTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAAAACCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp ACAGTAAGGATTGTGCGTTGGAGCAGGAGATTGCTTCAGTGCCCCCTCCCTAGGAGTAAGGATTGTGCGTaGGAGCAGGAGATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TVRIVRWSRRLLQCPLPRSKDCA*EQEIAS
Trigger: TGAAGCAATCTCCTGCTCCAACGCACAATCCTTACT...CCTAGGGAGGGGGCACTGAAGCAATCTCCTGCTCCAACGCACAATCCTTACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TCATTTCATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCAGCAGCACCGGCGTCTaGTCGAAAAGCTCACCCTTG +
Preference number: 5 (lower is better)
Translates to: SFHRSGTHDACFSLSLSLSSTGV*SKSSPL
Trigger: CAAGGGTGAGCTTTTCGACAAGACGCCGGTGCTGCT...GAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp GTCCTGGGGAAACCGCCTGGGAGGAGGCTGGCTCAGCAATCAGAGCCTCAAATTCACCTCATGAATGCTTaGCTGCTTAGAAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLGKPPGRRLAQQSEPQIHLMNA*LLRNFF
Trigger: GAAGAAATTTCTAAGCAGCAAAGCATTCATGAGGTG...AATTTGAGGCTCTGATTGCTGAGCCAGCCTCCTCCCAGGCGGTTTCCCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCGCCGATCCCCTGCGCTaGAACCAGAGTGAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGADPLR*NQSEAA
Trigger: GGCAGCTTCACTCTGGTTCAAGCGCAGGGGATCGGC...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGCTGGCGTTGGGGAATTaGACCTCATCGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMLALGN*TSSKSK
Trigger: CTTCGACTTCGATGAGGTCAAATTCCCCAACGCCAG...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp AAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTTCTGGGAGGGGATCTCTaGCCTCCTTGTCAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: KLFQPLPVTQFQSCFHIFLGGDL*PPCQPN
Trigger: GTTTGGCTGACAAGGAGGCAAGAGATCCCCTCCCAG...AAAAATGTGGAAGCAACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp AAGCCATTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTACTGAGTCATTGACTTaGATGGCGGCCGCGCGCGAA +
Preference number: 5 (lower is better)
Translates to: KPFNKSLGSPKLSHIFLSTESLT*MAAARE
Trigger: TTCGCGCGCGGCCGCCATCAAAGTCAATGACTCAGT...AGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGGACAAAGATGGCGGATCTCTTGCCTCCTaGTCAGCCAAACACCTCCCC +
Preference number: 5 (lower is better)
Translates to: YLETLNKIKSPPKMDKDGGSLAS*SAKHLP
Trigger: GGGGAGGTGTTTGGCTGACAAGGAGGCAAGAGATCC...GCCATCTTTGTCCATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CATAGATCAGGGACCCATGATGCGTGTTTCTCTCTCTCTCTCTCTCTCACACACTTGCTACCAGAGCTGTaGATGGAAGCTAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: HRSGTHDACFSLSLSLTHLLPEL*MEAKVH
Trigger: GTGAACTTTAGCTTCCATCAACAGCTCTGGTAGCAA...GTGTGTGAGAGAGAGAGAGAGAGAGAAACACGCATCATGGGTCCCTGATCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp CCAGTTCCAAAGTTGCTTCCACATTTTTGGGTATTTACAGCAGCGCCCCACTCTTACCCAGTTCCAAAGTaGCTTCCACATTTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: PVPKLLPHFWVFTAAPHSYPVPK*LPHFWV
Trigger: TACCCAAAAATGTGGAAGCAACTTTGGAACTGGGTA...AGAGTGGGGCGCTGCTGTAAATACCCAAAAATGTGGAAGCAACTTTGGAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TGTGGTGGGGGCTATTTGGAGACCTTAAATAAGATCAAGTCCCCACCTAAGATGATGCAGCCAGTCTCTTaGCTAAAATATAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: CGGGYLETLNKIKSPPKMMQPVS*LKYSKS
Trigger: ACTCTTGCTATATTTTAGCAAAGAGACTGGCTGCAT...CATCTTAGGTGGGGACTTGATCTTATTTAAGGTCTCCAAATAGCCCCCACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS-3UTR CAA 90 bp TTTAACAAGTCTCTAGGAAGTCCCAAACTTTCCCACATTTTCCTGTCTTCTGATCCAAAATGGTCTCCTTaGACTCCATGTCTCACATCC +
Preference number: 5 (lower is better)
Translates to: FNKSLGSPKLSHIFLSSDPKWSP*TPCLTS
Trigger: GGATGTGAGACATGGAGTCAAAGGAGACCATTTTGG...ATCAGAAGACAGGAAAATGTGGGAAAGTTTGGGACTTCCTAGAGACTTGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 72 bp AGCTCGCGCTCGGGCACATCGCCGCCGGCTGTCCGCTaGGGCACGGCGTTGCCGCCCACCATATCGGGTAGG +
Preference number: 6 (lower is better)
Translates to: SSRSGTSPPAVR*GTALPPTISGR
Trigger: CCTACCCGATATGGTGGGCGGCAACGCCGTGCCCCAGCGGACAGCCGGCGGCGATGTGCCCGAGCGCGAGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 72 bp GTAGCTCAGCTCTGGCGCTGCGGCGCGGCCGGCGGGTaGCTTGTAGGGCGTGTCGTGGTAGCGCGCCTGAAG +
Preference number: 6 (lower is better)
Translates to: VAQLWRCGAAGG*LVGRVVVARLK
Trigger: CTTCAGGCGCGCTACCACGACACGCCCTACAAGCCACCCGCCGGCCGCGCCGCAGCGCCAGAGCTGAGCTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297625.8
ENST00000379142.3
CDS CCA 72 bp CAAGCGAGGCCCGCAGGGCGGCGAACTTCTGCGCGATaGCCACCACTTCCGCGTCGTAGCGCCAGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: QARPAGRRTSAR*PPLPRRSARAG
Trigger: TCCCGCCCTGGCGCTACGACGCGGAAGTGGTGGCCATCGCGCAGAAGTTCGCCGCCCTGCGGGCCTCGCTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 72 bp GCGGGGGTGAAAGAGCTTCCCGCCGATCCCCTGCGCTaGAACCAGAGTGAAGCTGCCGCCGCGCCGCGCGGG +
Preference number: 6 (lower is better)
Translates to: AGVKELPADPLR*NQSEAAAAPRG
Trigger: CCCGCGCGGCGCGGCGGCAGCTTCACTCTGGTTCAAGCGCAGGGGATCGGCGGGAAGCTCTTTCACCCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp CAAGAACATGGCGTGCTCCACGGCCCGGCCCGGCGCTaGCTCCTCCCAGCGCACGCGGTAGCACATGACCGT +
Preference number: 6 (lower is better)
Translates to: QEHGVLHGPARR*LLPAHAVAHDR
Trigger: ACGGTCATGTGCTACCGCGTGCGCTGGGAGGAGGCAGCGCCGGGCCGGGCCGTGGAGCACGCCATGTTCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 72 bp CGTTCCACCAGCGCACCAGCGCAGGTAACCGGCCCGTaGGTTCGCGCACGAACAGCTCGCGCTCCACGCCCT +
Preference number: 6 (lower is better)
Translates to: RSTSAPAQVTGP*VRARTARAPRP
Trigger: AGGGCGTGGAGCGCGAGCTGTTCGTGCGCGAACCCACGGGCCGGTTACCTGCGCTGGTGCGCTGGTGGAACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp GTCGGTGACCTCGCCCGCCAGCTCAAGCAACAGCGGTaGCACAAGCGAGGCCCGCAGGGCGGCGAACTTCTG +
Preference number: 6 (lower is better)
Translates to: VGDLARQLKQQR*HKRGPQGGELL
Trigger: CAGAAGTTCGCCGCCCTGCGGGCCTCGCTTGTGGCACCGCTGTTGCTTGAGCTGGCGGGCGAGGTCACCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp CCCCAAACGCGGCGTCGGAGGAGTAGACATCGCTGGTaGCGAACGGCTGGGGCTCCTGCTGGCCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: PQTRRRRSRHRW*RTAGAPAGHPG
Trigger: GCCTGGATGGCCAGCAGGAGCCCCAGCCGTTCGTCACCAGCGATGTCTACTCCTCCGACGCCGCGTTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp ACCGTGTCCTTGGGCCGCACAGTCTGGATGAAGAAGTaGAGCGGCAGCCCGTCGGCCGTGAGCGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: TVSLGRTVWMKK*SGSPSAVSEQP
Trigger: GGGCTGCTCGCTCACGGCCGACGGGCTGCCGCTGCACTTCTTCATCCAGACTGTGCGGCCCAAGGACACGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp CGGCCGCGCGCGAAGATAGCCAGTAGCGCTCGAGGATaGCCCCAAACGCGGCGTCGGAGGAGTAGACATCGC +
Preference number: 6 (lower is better)
Translates to: RPRAKIASSARG*PQTRRRRSRHR
Trigger: GCGATGTCTACTCCTCCGACGCCGCGTTTGGGGGCATCCTCGAGCGCTACTGGCTATCTTCGCGCGCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297625.8
ENST00000379142.3
CDS CCA 72 bp TGTCCTGGTCCACGGCGCGCCCGTACAGCGCCCATGTaGACCAAATGGGGTCTCGGAAGGCCTCGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CPGPRRARTAPM*TKWGLGRPRVL
Trigger: CAGCACCCGAGGCCTTCCGAGACCCCATTTGGTCCACATGGGCGCTGTACGGGCGCGCCGTGGACCAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GGTGTCCCTGGAACCAGTCGCGGGCCTTTGGGTGCGTaGAGTCTAGCACCGCGCCGATGCCGTTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: GVPGTSRGPLGA*SLAPRRCRSTS
Trigger: GCTGGTGGAACGGCATCGGCGCGGTGCTAGACTTCACGCACCCAAAGGCCCGCGACTGGTTCCAGGGACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp CGCAGGTGTCCCTGGAACCAGTCGCGGGCCTTTGGGTaGGTGAAGTCTAGCACCGCGCCGATGCCGTTCCAC +
Preference number: 6 (lower is better)
Translates to: RRCPWNQSRAFG*VKSSTAPMPFH
Trigger: GTGGAACGGCATCGGCGCGGTGCTAGACTTCACGCACCCAAAGGCCCGCGACTGGTTCCAGGGACACCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp ACTTGCCGGCGGGCAAATAGACGTCGCGCTCCTGCTTaGCTGGCTCCAGCACCGGGGCCACAAGCAGCGTGT +
Preference number: 6 (lower is better)
Translates to: TCRRANRRRAPA*LAPAPGPQAAC
Trigger: ACACGCTGCTTGTGGCCCCGGTGCTGGAGCCAGGCAAGCAGGAGCGCGACGTCTATTTGCCCGCCGGCAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 72 bp CAGTGTTGCGTCCTCATCTCGGCGCCACCATACCAGTaGGCCGCCGCGTCGCCCAAGAACATGGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: QCCVLISAPPYQ*AAASPKNMACS
Trigger: GGAGCACGCCATGTTCTTGGGCGACGCGGCGGCCCACTGGTATGGTGGCGCCGAGATGAGGACGCAACACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 72 bp TGGTGCAGGCGGATCTGTTGGGCAAAACGCAGCACCTaGTCCTGGTCCACGGCGCGCCCGTACAGCGCCCAT +
Preference number: 6 (lower is better)
Translates to: WCRRICWAKRST*SWSTARPYSAH
Trigger: ATGGGCGCTGTACGGGCGCGCCGTGGACCAGGACAAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp CCCCAAACGCGGCGTCGGAGGAGTAGACATCGCTGGTaGCGAACGGCTGGGGCTCCTGCTCTCCCTTCTGAT +
Preference number: 6 (lower is better)
Translates to: PQTRRRRSRHRW*RTAGAPALPSD
Trigger: ATCAGAAGGGAGAGCAGGAGCCCCAGCCGTTCGTCACCAGCGATGTCTACTCCTCCGACGCCGCGTTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379142.3
CDS CCA 72 bp ACGGCTGGGGCTCCTGCTCTCCCTTCTGATTGCGGATaGAGAAGCCGCCAGCTTTCAGGTCCAGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: TAGAPALPSDCG*RSRQLSGPAAP
Trigger: CGGAGCTGCTGGACCTGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGAGCCCCAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379142.3
CDS CAA 72 bp CCGGCGTCGCGCAGGCGGCGGAACATGTCGCTGGCGTaGGGGAATTTGACCTCATCGAAGTCGAAGTCGCCA +
Preference number: 6 (lower is better)
Translates to: PASRRRRNMSLA*GNLTSSKSKSP
Trigger: TGGCGACTTCGACTTCGATGAGGTCAAATTCCCCAACGCCAGCGACATGTTCCGCCGCCTGCGCGACGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 90 bp AGCAGCAGCCCCAGAACCGCGGAGCCCAGCAGCGGCTTCAGGTCTTaGGAAGGCTTGGGCTTGGCAGGTGAGAAGTTGTCGGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SSSPRTAEPSSGFRS*EGLGLAGEKLSGRK
Trigger: CTTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGCTGCTGGGCTCCGCGGTTCTGGGGCTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 90 bp CTGTTGAAGTGGTGCAGGCGGATCTGTTGGGCAAAACGCAGCACCTaGTCCTGGTCCACGGCGCGCCCGTACAGCGCCCATGTGGACCAA +
Preference number: 6 (lower is better)
Translates to: LLKWCRRICWAKRST*SWSTARPYSAHVDQ
Trigger: TTGGTCCACATGGGCGCTGTACGGGCGCGCCGTGGACCAGGACAAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GAGCGGAAGGCCAGGCGGAAGACCTGCTCTCCCTTCTaGTTGCGGATGGAGAAGCCGCCAGCTTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: ERKARRKTCSPF*LRMEKPPAFRS
Trigger: GGACCTGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGTCTTCCGCCTGGCCTTCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GCGACGCACCATGTACTTGTGGATGGAGGTGACGTCTaGGCCCACGCACACTCGGTAGCTCAGCTCTGGCGC +
Preference number: 6 (lower is better)
Translates to: ATHHVLVDGGDV*AHAHSVAQLWR
Trigger: GCGCCAGAGCTGAGCTACCGAGTGTGCGTGGGCTCAGACGTCACCTCCATCCACAAGTACATGGTGCGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp GCACCGGCGTCTTGTCGAAAAGCTCACCCTTGTAGCTaGGCCACTTGCCGGCGGGCAAATAGACGTCGCGCT +
Preference number: 6 (lower is better)
Translates to: APASCRKAHPCS*ATCRRANRRRA
Trigger: AGCGCGACGTCTATTTGCCCGCCGGCAAGTGGCGCAGCTACAAGGGTGAGCTTTTCGACAAGACGCCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 72 bp CCAGGCGGAAGACCTGCTCTCCCTTCTGATTGCGGATaGAGAAGCCGCCAGCTTTCAGGTCCAGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PGGRPALPSDCG*RSRQLSGPAAP
Trigger: CGGAGCTGCTGGACCTGAAAGCTGGCGGCTTCTCCATCCGCAATCAGAAGGGAGAGCAGGTCTTCCGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 90 bp ACCGCGGAGCCCAGCAGCGGCTTCAGGTCTTTGGAAGGCTTGGGCTaGGCAGGTGAGAAGTTGTCGGGCAGGAAGGTGTACATAGCTGCG +
Preference number: 6 (lower is better)
Translates to: TAEPSSGFRSLEGLG*AGEKLSGRKVYIAA
Trigger: CGCAGCTATGTACACCTTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGCTGCTGGGCTCCGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GCGATCCACCAGGCGGAAGAAGCAGGAGATGTTCTGTaGCTGGTAGCCTACGCGCACCTCCGCCAGCGAGAA +
Preference number: 6 (lower is better)
Translates to: AIHQAEEAGDVL*LVAYAHLRQRE
Trigger: TTCTCGCTGGCGGAGGTGCGCGTAGGCTACCAGTCACAGAACATCTCCTGCTTCTTCCGCCTGGTGGATCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 90 bp AGCGGCTTCAGGTCTTTGGAAGGCTTGGGCTTGGCAGGTGAGAAGTaGTCGGGCAGGAAGGTGTACATAGCTGCGGCTGCGATGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SGFRSLEGLGLAGEK*SGRKVYIAAAAMAS
Trigger: CGAGGCCATCGCAGCCGCAGCTATGTACACCTTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 90 bp CCCAGAACCGCGGAGCCCAGCAGCGGCTTCAGGTCTTTGGAAGGCTaGGGCTTGGCAGGTGAGAAGTTGTCGGGCAGGAAGGTGTACATA +
Preference number: 6 (lower is better)
Translates to: PRTAEPSSGFRSLEG*GLAGEKLSGRKVYI
Trigger: TATGTACACCTTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCTGAAGCCGCTGCTGGGCTCCGCGGTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GGAAGGCCTCGGGTGCTGGCACCCTTGACGGCTTGTTaGAGTAGCGACGCACCATGTACTTGTGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: GRPRVLAPLTAC*SSDAPCTCGWR
Trigger: CCTCCATCCACAAGTACATGGTGCGTCGCTACTTCAACAAGCCGTCAAGGGTGCCAGCACCCGAGGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp AGCGTGTCCCCAATAAGGAACTGCGAGTCGATACGGTaGGCTGTCTCGTCGCCGGGCGCAATCCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: SVSPIRNCESIR*AVSSPGAIHQR
Trigger: CCTTTGGTGGATTGCGCCCGGCGACGAGACAGCTCACCGTATCGACTCGCAGTTCCTTATTGGGGACACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp GAAGTTGTCGGGCAGGAAGGTGTACATAGCTGCGGCTaGGATGGCCTCGGGGTTCTGACGGTATGCGTAGCA +
Preference number: 6 (lower is better)
Translates to: EVVGQEGVHSCG*DGLGVLTVCVA
Trigger: TGCTACGCATACCGTCAGAACCCCGAGGCCATCGCAGCCGCAGCTATGTACACCTTCCTGCCCGACAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp TCTTGTCGAAAAGCTCACCCTTGTAGCTGCGCCACTTaGCGGCGGGCAAATAGACGTCGCGCTCCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: SCRKAHPCSCAT*RRANRRRAPAC
Trigger: GCAAGCAGGAGCGCGACGTCTATTTGCCCGCCGGCAAGTGGCGCAGCTACAAGGGTGAGCTTTTCGACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GCAGGCGGCGGAACATGTCGCTGGCGTTGGGGAATTTaGCCTCATCGAAGTCGAAGTCGCCATAAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: AGGGTCRWRWGI*PHRSRSRHKQV
Trigger: CACCTGCTTATGGCGACTTCGACTTCGATGAGGTCAAATTCCCCAACGCCAGCGACATGTTCCGCCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp AGTAGGCGATCTCATCCAGGTCGACCGGGTAATCGGTaGGCAGCACCGGCGTCTTGTCGAAAAGCTCACCCT +
Preference number: 6 (lower is better)
Translates to: SRRSHPGRPGNR*AAPASCRKAHP
Trigger: AGGGTGAGCTTTTCGACAAGACGCCGGTGCTGCTCACCGATTACCCGGTCGACCTGGATGAGATCGCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 72 bp AGGTCTTTGGAAGGCTTGGGCTTGGCAGGTGAGAAGTaGTCGGGCAGGAAGGTGTACATAGCTGCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: RSLEGLGLAGEK*SGRKVYIAAAA
Trigger: CGCAGCCGCAGCTATGTACACCTTCCTGCCCGACAACTTCTCACCTGCCAAGCCCAAGCCTTCCAAAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp CTGCTAAGAAAGGAGCGGGCCGTGGGGCCATCTGACTaGGTTCATCTCAACCTGCTCCATTGCAGTTACAGC +
Preference number: 6 (lower is better)
Translates to: LLRKERAVGPSD*VHLNLLHCSYS
Trigger: GCTGTAACTGCAATGGAGCAGGTTGAGATGAACTCAGTCAGATGGCCCCACGGCCCGCTCCTTTCTTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp TGGGCTGCTAAGAAAGGAGCGGGCCGTGGGGCCATCTaGCTGAGTTCATCTCAACCTGCTCCATTGCAGTTA +
Preference number: 6 (lower is better)
Translates to: WAAKKGAGRGAI*LSSSQPAPLQL
Trigger: TAACTGCAATGGAGCAGGTTGAGATGAACTCAGTCAGATGGCCCCACGGCCCGCTCCTTTCTTAGCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS GCA 72 bp ATGTCGTCGATTTCCAGGTGGCTGCTGTTGAAGTGGTaGAGGCGGATCTGTTGGGCAAAACGCAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: MSSISRWLLLKW*RRICWAKRSTL
Trigger: CAAGGTGCTGCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CCA 72 bp TACATGTCGTCGATTTCCAGGTGGCTGCTGTTGAAGTaGTGCAGGCGGATCTGTTGGGCAAAACGCAGCACC +
Preference number: 6 (lower is better)
Translates to: YMSSISRWLLLK*CRRICWAKRST
Trigger: GGTGCTGCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS CAA 72 bp GGTGTGTACATGTCGTCGATTTCCAGGTGGCTGCTGTaGAAGTGGTGCAGGCGGATCTGTTGGGCAAAACGC +
Preference number: 6 (lower is better)
Translates to: GVYMSSISRWLL*KWCRRICWAKR
Trigger: GCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACATGTACACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8
CDS TCA 72 bp GTGTGTACATGTCGTCGATTTCCAGGTGGCTGCTGTTaGAGTGGTGCAGGCGGATCTGTTGGGCAAAACGCA +
Preference number: 6 (lower is better)
Translates to: VCTCRRFPGGCC*SGAGGSVGQNA
Trigger: TGCGTTTTGCCCAACAGATCCGCCTGCACCACTTCAACAGCAGCCACCTGGAAATCGACGACATGTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297625.8