RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYOM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000142661

Ensembl transcript IDs: ENST00000338909.9, ENST00000374434.4, ENST00000448831.1, ENST00000475306.1

Found 573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGCCCCGTGCTaGAAGCCCTGGAGGTTACCAGCTCCAAGCCTGGTATCCAAGGCC +
Preference number: 1 (lower is better)
Translates to: SEASRYLSHQAEAPC*KPWRLPAPSLVSKA
Trigger: GGCCTTGGATACCAGGCTTGGAGCTGGTAACCTCCAGGGCTTCCAGCACGGGGCCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 90 bp TCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGCCCCGTaGTGGAAGCCCTGGAGGTTACCAGCTCCAAGCCTGGTATCCAAG +
Preference number: 1 (lower is better)
Translates to: SSEASRYLSHQAEAP*WKPWRLPAPSLVSK
Trigger: CTTGGATACCAGGCTTGGAGCTGGTAACCTCCAGGGCTTCCAGCACGGGGCCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 90 bp TCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTaGTTCTCCACTTTGGTGCATCCGCTCCACCCCCACCCTCACATC +
Preference number: 1 (lower is better)
Translates to: SSRSPGSHSGPQKDL*FSTLVHPLHPHPHI
Trigger: GATGTGAGGGTGGGGGTGGAGCGGATGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CCA 90 bp GCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTaGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACTTT +
Preference number: 1 (lower is better)
Translates to: ASGSPTPGPGFIPLS*KPLRTPERSLLLHF
Trigger: AAAGTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 90 bp CCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCTGCTTATCAGCTaGCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCTAGA +
Preference number: 1 (lower is better)
Translates to: PTGLRPLCKQNLLIS*LCVPSSILSLPHAR
Trigger: TCTAGCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 90 bp CTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGTTTaGGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAA +
Preference number: 1 (lower is better)
Translates to: LLYNLYHVLPCPGVV*AQVCFSHWTEASLQ
Trigger: TTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CCA 90 bp ATGCTAGACTTCAGGTGTCTGTTGAACTTACATGAATTGAAACTATaGGATCCTAAAAGAGGGGTGCGATGTATCAGTTTATGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: MLDFRCLLNLHELKL*DPKRGVRCISLWQG
Trigger: GCCCTGCCATAAACTGATACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAGACACCTGAAGTCTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTGTCCCCTTTCCTTCTaGCCCACCCCTGTAGCCTGT +
Preference number: 2 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLCPLSF*PTPVAC
Trigger: ACAGGCTACAGGGGTGGGGCAGAAGGAAAGGGGACA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTGCTTCTCCACTTTGGTaGATCCGCTCCACCCCCACC +
Preference number: 2 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAASPLW*IRSTPT
Trigger: GGTGGGGGTGGAGCGGATGCACCAAAGTGGAGAAGC...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACCACCCCTGTAGCCTGTaGCAGGCTGTGACCCTGGTA +
Preference number: 2 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHHPCSL*QAVTLV
Trigger: TACCAGGGTCACAGCCTGGCACAGGCTACAGGGGTG...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCCACCCCTGTAGCCTGTaGCAGGCTGTGACCCTGGTA +
Preference number: 2 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFHPCSL*QAVTLV
Trigger: TACCAGGGTCACAGCCTGGCACAGGCTACAGGGGTG...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CAA 90 bp TTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTaGCTTCTCCACTTTGGTGCATCCGCTCCACCCCCACCCTCACAT +
Preference number: 2 (lower is better)
Translates to: FIPLSWKPLRTPERS*LLHFGASAPPPPSH
Trigger: ATGTGAGGGTGGGGGTGGAGCGGATGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTTCATCCCGCTCTCCTaGAAGCCACTCAGGACCCCA +
Preference number: 2 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRFIPLS*KPLRTP
Trigger: TGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CAA 90 bp CAAAGCCCTACCTCCCCCTGTTGGGACGACCCTCTGTCTCCCTCCTaGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTTT +
Preference number: 2 (lower is better)
Translates to: QSPTSPCWDDPLSPS*DHWRHFPWTCFIIF
Trigger: AAAGATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGTCCCAACAGGGGGAGGTAGGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTGTCCTGCCTTGTCCTaGAGTTGTTTGCGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQCPALS*SCLRPG
Trigger: ACCTGGGCGCAAACAACTCCAGGACAAGGCAGGACA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCCACCTCGCCCAGCCTaGATGAAGGTGTTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRPPRPA*MKVFSK
Trigger: CTTTGAAAACACCTTCATCCAGGCTGGGCGAGGTGG...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGAACCTGCTTATCAGCTaGCTTTGTGTTCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRNLLIS*LCVPSS
Trigger: GGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR TCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGGCCTGTGCCAGGCTGTaGCCCTGGTACAGGTTGTCC +
Preference number: 2 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEACARL*PWYRLS
Trigger: GGACAACCTGTACCAGGGTCACAGCCTGGCACAGGC...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR TCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGGCCTGTGCCAGGCTGTaGCCCTGGTACAGGTTGTCC +
Preference number: 2 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELACARL*PWYRLS
Trigger: GGACAACCTGTACCAGGGTCACAGCCTGGCACAGGC...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR TCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTCTGTTGAACTTACATaGATTGAAACTATGGGATCC +
Preference number: 2 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLSVELT*IETMGS
Trigger: GGATCCCATAGTTTCAATTCATGTAAGTTCAACAGA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCATCCTAAAAGAGGGGTaGGATGTATCAGTTTATGGC +
Preference number: 2 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIILKEG*DVSVYG
Trigger: GCCATAAACTGATACATCGCACCCCTCTTTTAGGAT...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCTCGGATAATTCTATGTaGTGGGAGCTGCAGTGTTTA +
Preference number: 2 (lower is better)
Translates to: CKQNLLISCLCVPSSILSSDNSM*WELQCL
Trigger: TAAACACTGCAGCTCCCACCACATAGAATTATCCGA...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR GCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGCCCCAGAAAGATCTTTaGTTCTCCACTTTGGTGCAT +
Preference number: 2 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEPQKDL*FSTLVH
Trigger: ATGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGG...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CAA 90 bp GCCTCCCACATGCTAGACTTCAGGTGTCTGTTGAACTTACATGAATaGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTATCAGTTTA +
Preference number: 2 (lower is better)
Translates to: ASHMLDFRCLLNLHE*KLWDPKRGVRCISL
Trigger: TAAACTGATACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAGACACCTGAAGTCTAGCATGTGGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGGGCACTTTTGACATCTaGGGTCGGATAATTCTATGT +
Preference number: 2 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEGTFDI*GRIILC
Trigger: ACATAGAATTATCCGACCCCAGATGTCAAAAGTGCC...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGTCGGATAATTCTATGTaGTGGGAGCTGCAGTGTTTA +
Preference number: 2 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELSDNSM*WELQCL
Trigger: TAAACACTGCAGCTCCCACCACATAGAATTATCCGA...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTGGCACTTTTGACATCTaGGGTCGGATAATTCTATGT +
Preference number: 2 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCGTFDI*GRIILC
Trigger: ACATAGAATTATCCGACCCCAGATGTCAAAAGTGCC...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 72 bp GCCAGCCGGTATCTGTCACACCAGGCAGAGGCCCCGTaGTGGAAGCCCTGGAGGTTACCAGCTCCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: ASRYLSHQAEAP*WKPWRLPAPSL
Trigger: CAGGCTTGGAGCTGGTAACCTCCAGGGCTTCCAGCACGGGGCCTCTGCCTGGTGTGACAGATACCGGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTACCCCAGAAAGATCTTaGCTTCTCCACTTTGGTGCA +
Preference number: 3 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSTPERS*LLHFGA
Trigger: TGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGGT...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGTGCCTTGTCCTGGAGTaGTTTGCGCCCAGGTCTGTT +
Preference number: 3 (lower is better)
Translates to: STEIHQVRPAGICHTRQRCLVLE*FAPRSV
Trigger: AACAGACCTGGGCGCAAACAACTCCAGGACAAGGCA...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR TCA 72 bp AGAGAAATGCCCAGCTCAGTACTGAGATCCATCAAGTaGGGCCAGCCGGTATCTGTCACACCAGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: REMPSSVLRSIK*GQPVSVTPGRG
Trigger: GCCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTGGGCATTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 72 bp CTGAGGCCTCTTTGCAAGCAGAACCTGCTTATCAGCTaGCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: LRPLCKQNLLIS*LCVPSSILSLP
Trigger: TGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCAAAGAGGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CCA 72 bp TCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTaGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: SPTPGPGFIPLS*KPLRTPERSLL
Trigger: AAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACATCCTGGGTTCTATCTaGTCCCCTTTCCTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNILGSI*SPFLLP
Trigger: GGGCAGAAGGAAAGGGGACAAGATAGAACCCAGGAT...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTGCCTTGTCCTGGAGTaGTTTGCGCCCAGGTCTGTT +
Preference number: 3 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIICLVLE*FAPRSV
Trigger: AACAGACCTGGGCGCAAACAACTCCAGGACAAGGCA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CCA 72 bp ATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCTaGGGTCGGATAATTCTATGTGGTGGGAGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: MAGLMALGTFDI*GRIILCGGSCS
Trigger: ACTGCAGCTCCCACCACATAGAATTATCCGACCCCAGATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTTATCATGTCCTGCCTaGTCCTGGAGTTGTTTGCGC +
Preference number: 3 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRLSCPA*SWSCLR
Trigger: GCGCAAACAACTCCAGGACAAGGCAGGACATGATAA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGACCCCAGAAAGATCTTaGCTTCTCCACTTTGGTGCA +
Preference number: 3 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRTPERS*LLHFGA
Trigger: TGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGGT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCTGGCGGCACTTTCCTaGGACCTGCTTTATAATCTT +
Preference number: 3 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRLAALS*DLLYNL
Trigger: AAGATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAG...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR GCA 72 bp CCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTaGTTTATAATCTTTATCATGTCCTGCCTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: PSLDHWRHFPWT*FIIFIMSCLVL
Trigger: CAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CCA 72 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTaGACCTGCTTTATAATCTTTATCATGTCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LSPSLDHWRHFP*TCFIIFIMSCL
Trigger: AAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTGACTTCAGGTGTCTGTaGAACTTACATGAATTGAAA +
Preference number: 3 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLDFRCL*NLHELK
Trigger: TTTCAATTCATGTAAGTTCAACAGACACCTGAAGTC...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGACTTCAGGTGTCTGTaGAACTTACATGAATTGAAA +
Preference number: 3 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNDFRCL*NLHELK
Trigger: TTTCAATTCATGTAAGTTCAACAGACACCTGAAGTC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTGCCCCGGGTGTCACTaGGCGGGGCCCAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLCPGCH*AGPKSG
Trigger: TCCTGACTTGGGCCCCGCCCAGTGACACCCGGGGCA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGAGATGGGGCCTGGGGTaGCCGGCTTCCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLRWGLG*PASTAQ
Trigger: CTGAGCAGTGGAAGCCGGTCACCCCAGGCCCCATCT...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACTCTGTCCCGGGGGCTaGGCTCCTCCCAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGLCPGG*APPRPE
Trigger: TTCTGGCCTGGGAGGAGCCCAGCCCCCGGGACAGAG...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGCCAGGGCGTCACCCGTaGGGTCCAATATGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLPGRHP*GPIWCR
Trigger: ACGACACCATATTGGACCTCACGGGTGACGCCCTGG...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGGGCTCGGTGGCGGCTaGGCTCTCGCCTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNGLGGG*ALAYPS
Trigger: GCTGGGGTAGGCGAGAGCTCAGCCGCCACCGAGCCC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGGATGGGCTGCTGATTaGCCGCATGCCAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLGWAAD*PHASPA
Trigger: AGCTGGACTGGCATGCGGTCAATCAGCAGCCCATCC...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGCACCCCTGTAGCCTGTaGCAGGCTGTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLHPCSL*QAVTLV
Trigger: TACCAGGGTCACAGCCTGGCACAGGCTACAGGGGTG...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTGCACAGAGGAGCCCATaGGCAGGCTGTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAAQRSP*AGCAAA
Trigger: AGCGGCAGCACAGCCTGCGCATGGGCTCCTCTGTGC...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTGGAGTACGTCAGTGGTaGTCTGTCCCGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAGVRQW*SVPGAG
Trigger: CCCAGCCCCCGGGACAGAGCACCACTGACGTACTCC...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGCACCCCTGTAGCCTGTaGCAGGCTGTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQHPCSL*QAVTLV
Trigger: TACCAGGGTCACAGCCTGGCACAGGCTACAGGGGTG...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAATGCGCAGGCTGTGCTaGCGCTCCTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGMRRLC*RSSFCS
Trigger: GGAGCAGAAGGAGGAGCGGCAGCACAGCCTGCGCAT...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACCAGAGCCAGGGCTGCTaGCAGGGCGTAGTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHQSQGC*QGVVRG
Trigger: GCCGCGGACTACGCCCTGGCAGCAGCCCTGGCTCTG...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGAGCAGCCGGTGGGTCTaGAGGAAGGCGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQSSRWV*RKAISV
Trigger: GACTGAGATCGCCTTCCTGCAGACCCACCGGCTGCT...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCAGCTCGCCAACACCTaGCCAGTTGGCAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLQLANT*PVGSPG
Trigger: GCCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGGCCCGCACCTCGGATaGCCGTACATCGTACGGGGG +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCGPHLG*PYIVRG
Trigger: CCCCCGTACGATGTACGGGCATCCGAGGTGCGGGCC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTACCTCCCCCTGTTaGGACGACCCTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSPTSPC*DDPLSP
Trigger: GGGAGACAGAGGGTCGTCCCAACAGGGGGAGGTAGG...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGAGGAGGCCTGGCCGTaGGCGTTCTTCACTCGCACA +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGEEAWP*AFFTRT
Trigger: TGTGCGAGTGAAGAACGCCCACGGCCAGGCCTCCTC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTTGCGGACGAGGACTTTaGCGAAGGAGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSCGRGL*RRRRPG
Trigger: GCCAGGCCTCCTCCTTCGCCAAAGTCCTCGTCCGCA...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTGGAGCACGGGATCAGTaGGCATGGACGGTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAGARDQ*AWTVAP
Trigger: TGGGGCAACCGTCCATGCCCACTGATCCCGTGCTCC...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTCCTGCCCAACTCGGTaGAGATGGCATCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPASCPTR*RWHPGR
Trigger: ACGCCCTGGATGCCATCTTCACCGAGTTGGGCAGGA...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGCTTTATCCTCGATCTTaGCCCTCTGGGGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLLYPRS*PSGGPV
Trigger: CACTGGACCCCCAGAGGGTCAAGATCGAGGATAAAG...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTCTCATCCAGGGTGGTaGCCGTCCTTATCCGATCAC +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLSHPGW*PSLSDH
Trigger: GTGATCGGATAAGGACGGGCACCACCCTGGATGAGA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGTCCTCTCCCAGTCATTaGCGAAGCCCACCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQSSPSH*RSPPAS
Trigger: AGAAGCGGGTGGGCTTCGGCAATGACTGGGAGAGGA...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTGTCCTGCCTTGTCCTaGAGTTGTTTGCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLCPALS*SCLRPG
Trigger: ACCTGGGCGCAAACAACTCCAGGACAAGGCAGGACA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTGTACCAGGTGACCTaGGGTGGTGGTGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPALYQVT*GGGEAW
Trigger: CCAGGCCTCACCACCACCCCAGGTCACCTGGTACAA...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCCTCCGGGGGCCTCATaGCAGGCGATCCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLPPGAS*QAIHSP
Trigger: TGGGGAATGGATCGCCTGCCATGAGGCCCCCGGAGG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGAGCCCCCATATACAGTaGGGGTTCCCACTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQSPHIQ*GFPLQH
Trigger: GTGCTGCAGTGGGAACCCCCACTGTATATGGGGGCT...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
3UTR CAA 72 bp ACCTCCCCCTGTTGGGACGACCCTCTGTCTCCCTCCTaGGACCACTGGCGGCACTTTCCTTGGACCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TSPCWDDPLSPS*DHWRHFPWTCF
Trigger: AAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGTCCCAACAGGGGGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGTCTCTGGGTCATACTaGCCATCTGGCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQVSGSY*PSGISA
Trigger: GGCAGAGATGCCAGATGGTCAGTATGACCCAGAGAC...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTGCCTGTGCCAGGCTGTaGCCCTGGTACAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLACARL*PWYRLS
Trigger: GGACAACCTGTACCAGGGTCACAGCCTGGCACAGGC...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTGGGGAGAAGATTCCTaGGGCCGAGAGGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAWGEDS*GREGPC
Trigger: ACAAGGACCCTCTCGGCCTCAGGAATCTTCTCCCCA...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGCCCGTAGTTGTTGGTaGTTCGGTATTTTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLARSCW*FGIFRH
Trigger: GTGCCGGAAAATACCGAATCACCAACAACTACGGGC...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGCCCAGCCTCGCTGACTaGCCTGACACAAAACTCGTA +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQPSLAD*PDTKLV
Trigger: TACGAGTTTTGTGTCAGGTCAGTCAGCGAGGCTGGG...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTTGTCCCCTTTCCTTCTaGCCCACCCCTGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSCPLSF*PTPVAC
Trigger: ACAGGCTACAGGGGTGGGGCAGAAGGAAAGGGGACA...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCAGGCAGAGGCCCCGTaGTGGAAGCCCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCQAEAP*WKPWRL
Trigger: TAACCTCCAGGGCTTCCAGCACGGGGCCTCTGCCTG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCCGTCAGAGCCAGGGCTaGTGCCAGGGCGTAGTCCGC +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIRQSQG*CQGVVR
Trigger: GCGGACTACGCCCTGGCAGCAGCCCTGGCTCTGACG...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGTGGGCATGGACGGTTaGCCCAGACCAGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGVGMDG*PRPAEF
Trigger: GAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCAC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGTGTCCTGCCTTGTCCTaGAGTTGTTTGCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQCPALS*SCLRPG
Trigger: ACCTGGGCGCAAACAACTCCAGGACAAGGCAGGACA...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCCTACCTCCCCCTGTTaGGACGACCCTCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLPTSPC*DDPLSP
Trigger: GGGAGACAGAGGGTCGTCCCAACAGGGGGAGGTAGG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGCCACCTCGCCCAGCCTaGATGAAGGTGTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLPPRPA*MKVFSK
Trigger: CTTTGAAAACACCTTCATCCAGGCTGGGCGAGGTGG...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTGGCGCAGCAGCCGGTaGGTCTGCAGGAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQWRSSR*VCRKAI
Trigger: GATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCGGCCCCGCAAGGCGATaGGTTCGCTGGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIGPARR*VRWAPR
Trigger: CCTCGGAGCCCAGCGAACCCATCGCCTTGCGGGGCC...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAACTCAAACAGGCTGCTaGGTGCCGACAGCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGTQTGC*VPTARQ
Trigger: TTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGT...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTGATCTCATGGGCACCTaGCTTGTCCTCCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSDLMGT*LVLQEH
Trigger: GTGCTCCTGGAGGACAAGCCAGGTGCCCATGAGATC...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGCTCTGGAAGAACCACTaGAAGCGAGTCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLLWKNH*KRVSFL
Trigger: CAAGAAGGAGACTCGCTTTCAGTGGTTCTTCCAGAG...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACGCCTGTGCCAGGCTGTaGCCCTGGTACAGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHACARL*PWYRLS
Trigger: GGACAACCTGTACCAGGGTCACAGCCTGGCACAGGC...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACTCGCCCAGCCTGGATaGAGGTGTTTTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGLAQPG*RCFQSP
Trigger: AGGGCTTTGAAAACACCTTCATCCAGGCTGGGCGAG...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCTGAGATCCATCAAGTaGGGCCAGCCGGTATCTGTC +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSLRSIK*GQPVSV
Trigger: GACAGATACCGGCTGGCCTCACTTGATGGATCTCAG...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGGGCCCAAGTCAGGATaGGGCAGTCTCTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGGPKSG*GSLCSH
Trigger: ATGTGAACAGAGACTGCCTCATCCTGACTTGGGCCC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTGCTGCCTACCCTGCTaGTGGCTCTCACCCGGAACC +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQCCLPC*WLSPGT
Trigger: GGTTCCGGGTGAGAGCCATCAGCAGGGTAGGCAGCA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTGCCCCAGACCAGCTaGATTCATGGCCTGTACCTG +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPALPQTS*IHGLYL
Trigger: CAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAA...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCTTGGCAGTCCTCCGTaGCCTTCCACTGCAACGGCC +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRLGSPP*PSTATA
Trigger: GGCCGTTGCAGTGGAAGGTCACGGAGGACTGCCAAG...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGACCATCTGGCATCTCTaGCCTCTGGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQTIWHL*PLEEPL
Trigger: CAGTGGTTCTTCCAGAGGGCAGAGATGCCAGATGGT...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTGGACAACTCTTCAATaGAGAGAAGTCCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLWTTLQ*REVPFP
Trigger: CGGGAACGGGACTTCTCTGCATTGAAGAGTTGTCCA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTTCTCATCCAGGGTGGTaGCCGTCCTTATCCGATCAC +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSSHPGW*PSLSDH
Trigger: GTGATCGGATAAGGACGGGCACCACCCTGGATGAGA...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGCAGGCAGAGGCCCCGTaGTGGAAGCCCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: STEIHQVRPAGICHTRQRQAEAP*WKPWRL
Trigger: TAACCTCCAGGGCTTCCAGCACGGGGCCTCTGCCTG...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGTGACCGGCTTCCACTaGTCAGAGCCTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCVTGFH*SEPSSW
Trigger: CCAGGAGGAAGGCTCTGAGCAGTGGAAGCCGGTCAC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTCCCCTGGATTTTCAGTaGAGTTGCAGAGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAPLDFQ*SCREGT
Trigger: GGTGCCCTCTCTGCAACTCCACTGAAAATCCAGGGG...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCCGTGCTGGAAGCCCTaGAGGTTACCAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCPCWKP*RLPAPS
Trigger: GCTTGGAGCTGGTAACCTCCAGGGCTTCCAGCACGG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTGCTCCCAGACGGCGTaGGAGCGAAGAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFCSQTA*ERRGIQ
Trigger: CTGGATCCCTCTTCGCTCCCACGCCGTCTGGGAGCA...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACCAGGGAGTACGTCAGTaGTGCTCTGTCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHQGVRQ*CSVPGA
Trigger: AGCCCCCGGGACAGAGCACCACTGACGTACTCCCTG...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACAGGCGATGGGTTCGCTaGGCTCCGAGGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNRRWVR*APRDRS
Trigger: TGAGCGATCCCTCGGAGCCCAGCGAACCCATCGCCT...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCAACACCTGCCCAGTTaGCAGCCCGGGCACGGAACT +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNQHLPS*QPGHGT
Trigger: AGTTCCGTGCCCGGGCTGCCAACTGGGCAGGTGTTG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGCCAGAGATGGGGCCTaGGGTGACCGGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIARDGA*GDRLPL
Trigger: CAGTGGAAGCCGGTCACCCCAGGCCCCATCTCTGGC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCGGGATCAGTGGGCATaGACGGTTGCCCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNRDQWA*TVAPDQ
Trigger: CTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGGCCCTTGTAGTCTTTaGACCACTGAAACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLGPCSL*TTETLR
Trigger: CCTCAGAGTTTCAGTGGTCCAAAGACTACAAGGGCC...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCCAGGGCGTCACCCGTaGGGTCCAATATGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNPGRHP*GPIWCR
Trigger: ACGACACCATATTGGACCTCACGGGTGACGCCCTGG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCAGGGGTGGGGTCTCCTaGGACGATGCAAGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCRGGVS*DDASQA
Trigger: TGCTTGACTTGCATCGTCTCAGGAGACCCCACCCCT...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACCGTAGTCCGCGGCGCTaGACTCATGCTCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHRSPRR*THALLR
Trigger: GCGAAGAAGAGCATGAGTTCAGCGCCGCGGACTACG...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCGACCTGGGGTGGTGGTaGGGCCTGGACAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIDLGWW*GLDSAG
Trigger: ACCTGCACTGTCCAGGCCTCACCACCACCCCAGGTC...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTTCCGAAAACAAGCATaGCAGGGAGAAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLFRKQA*QGEGFL
Trigger: AAGGAACCCTTCTCCCTGTCATGCTTGTTTTCGGAA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGGGACCACTGAAACTCTaGGGAGTCGGGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQGPLKL*GVGGFR
Trigger: CCTGAAGCCCCCGACTCCTCAGAGTTTCAGTGGTCC...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTAGATCTGTTGAGAGCTaGCGGACTTCCTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPARSVES*RTSFPA
Trigger: TGCAGGGAAGGAAGTCCGGCAGCTCTCAACAGATCT...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTGGTCTCCTGAGACGATaGAAGTCAAGCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAGLLRR*KSSTGS
Trigger: AGACCCTGTGCTTGACTTGCATCGTCTCAGGAGACC...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGGACACCTTCAGGGATaGCTGGCGGTCTGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCGHLQG*LAVCVE
Trigger: CTCTACACAGACCGCCAGGCATCCCTGAAGGTGTCC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTAGTAGCCCAGGATCTTaGCACCTCCACGACGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLSSPGS*HLHDAW
Trigger: CCAAGCGTCGTGGAGGTGGCAAGATCCTGGGCTACT...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTCCTTCCTCGGTCCCCTaGATTTTCAGTGGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAPSSVP*IFSGVA
Trigger: TGCAACTCCACTGAAAATCCAGGGGACCGAGGAAGG...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTAGATCTCATCCAGGGTaGTGCCCGTCCTTATCCGAT +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSRSHPG*CPSLSD
Trigger: ATCGGATAAGGACGGGCACCACCCTGGATGAGATCT...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGTGATCTGCCCGCCTTaGCCTCCCAAACTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCVICPP*PPKLLG
Trigger: TCCCAGTAGTTTGGGAGGCCAAGGCGGGCAGATCAC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCGCAGAGGCCCCGTGCTaGAAGCCCTGGAGGTTACCA +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCAAEAPC*KPWRLP
Trigger: TGGTAACCTCCAGGGCTTCCAGCACGGGGCCTCTGC...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCAGGTCAGCAGGACCGTaGTGTGCTCCCAGACGGCGT +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIRSAGP*CAPRRR
Trigger: ACGCCGTCTGGGAGCACACCACGGTCCTGCTGACCT...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCGCGAAGGAGGAGGCCTaGCCGTGGGCGTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCAAKEEA*PWAFFT
Trigger: AGTGAAGAACGCCCACGGCCAGGCCTCCTCCTTCGC...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCTCACGAGCAAAGACTaGCTTCAGCACCGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSLTSKD*LQHRGE
Trigger: TTCACCTCGGTGCTGAAGCCAGTCTTTGCTCGTGAG...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACGACGAGGCCTTGGATTaGGCACCGACAAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHDEALD*APTSPS
Trigger: GGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTC...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGGAGGGCAAAGCCATATaGGGCAGACGGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQEGKAI*GRRGSQ
Trigger: CTGGCTACCCCGTCTGCCCCATATGGCTTTGCCCTC...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTCGATCTTGACCCTCTaGGGGTCCAGTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRSILTL*GSSGPL
Trigger: CAAGGGCCCACTGGACCCCCAGAGGGTCAAGATCGA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCCCAATGGTCCTGCCTTaGACATGGGCTCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIPMVLP*TWAPKA
Trigger: GGCCTTGGGAGCCCATGTTCAAGGCAGGACCATTGG...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR TCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTTGGGGTCCAGGATGTaGAGCCAGATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLLGSRM*SQISSR
Trigger: CCTGGATGAGATCTGGCTTCACATCCTGGACCCCAA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGTATTTGCCCTTGTCTaGGTCTTTGGGGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGVFALV*VFGVQD
Trigger: ATCCTGGACCCCAAAGACTCAGACAAGGGCAAATAC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGAGGGGTGGGGTCTCCTaGGACGATGCAAGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: STEIHQVRPAGICHTRQRRGGVS*DDASQA
Trigger: TGCTTGACTTGCATCGTCTCAGGAGACCCCACCCCT...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTAGCCATACTTGTTCTTaGCGAAGACGCCGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLSHTCS*RRRRSG
Trigger: GCCGCTACGGCGTCTTCGTCAAGAACAAGTATGGCT...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCTCGCCCAGCCTGGATaGAGGTGTTTTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLLAQPG*RCFQSP
Trigger: AGGGCTTTGAAAACACCTTCATCCAGGCTGGGCGAG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCACAGTGTAAGTTGCTaGGTCCTCAATGGCGCATCT +
Preference number: 4 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSHSVSC*VLNGAS
Trigger: AGATGCGCCATTGAGGACTCAGCAACTTACACTGTG...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGCTTCAGCACCGAGGTaGATTCCACGCTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIASAPR*IPRWGQ
Trigger: TTGGCCCCAGCGTGGAATTCACCTCGGTGCTGAAGC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCAATGGTGTAGGCAGTaGTGGGGTTGCCCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSQWCRQ*WGCPGC
Trigger: ACACCCGGGGCAACCCCATCACTGCCTACACCATTG...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTGACATTGGTTGGCGGTaGGGGGATGGTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLDIGWR*GDGHSI
Trigger: GATACTGTGACCATCCCCTCACCGCCAACCAATGTC...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTCCGGACTTCCTTCCCTaGAGCTATTTCCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAPDFLP*SYFQSV
Trigger: TACACTCTGGAAATAGCTGCAGGGAAGGAAGTCCGG...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTGTCCCCTTTCCTTCTaGCCCACCCCTGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRCPLSF*PTPVAC
Trigger: ACAGGCTACAGGGGTGGGGCAGAAGGAAAGGGGACA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGCGGCGCTGAACTCATaGTCTTCTTCGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIAALNS*SSSLLR
Trigger: CCGCAGCAGCGAAGAAGAGCATGAGTTCAGCGCCGC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGTCTTCCTCCGGGCTaGATCATGGTCACCCATGAC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLCLPPG*IMVTHD
Trigger: GTCATGGGTGACCATGATGCAGCCCGGAGGAAGACA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTGCACTCAAACAGGCTaGTGGGTGCCGACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIICTQTG*WVPTAR
Trigger: GCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGTGCA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACACCTTGCACGTCAGCTaGACTTGGCAGTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHTLHVS*TWQSSV
Trigger: CACGGAGGACTGCCAAGTGCAGCTGACGTGCAAGGT...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGACACTGATGGTGACCTaGCCCGTCTCGGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRTLMVT*PVSEPY
Trigger: GTATGGCTCCGAGACGGGCCAGGTCACCATCAGTGT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTTCATCCCGCTCTCCTaGAAGCCACTCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFFIPLS*KPLRTP
Trigger: TGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAA...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACTTCATCCCGCTCTCCTaGAAGCCACTCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNFIPLS*KPLRTP
Trigger: TGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAA...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCGTCTGGCGTCTCAGCTaGGCTTCCCAAGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSVWRLS*ASQDSS
Trigger: CGAGCTGTCTTGGGAAGCCCAGCTGAGACGCCAGAC...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCCGCTGGCATGGACATTaGTTGGCGGTGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIRWHGH*LAVRGW
Trigger: CCATCCCCTCACCGCCAACCAATGTCCATGCCAGCG...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCCCTCTCGGATCTCGCTaGCATGGACATTGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFPLGSR*HGHWLA
Trigger: CGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGG...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCAGCTTGAACTTGAGCTaGAGGAGGGAGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCSLNLS*RREGSW
Trigger: CCAGCTACCCTCCCTCCTCCAGCTCAAGTTCAAGCT...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTCGGAAACCCTCAGGTaGGTGCCAGAGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIISETLR*VPEMGP
Trigger: AGGCCCCATCTCTGGCACCCACCTGAGGGTTTCCGA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGTCCTCAGACAAGTTCTaGATGATCACTTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQSSDKF*MITSTR
Trigger: CCTGGTGGAAGTGATCATCCAGAACTTGTCTGAGGA...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
3UTR CAA 72 bp CTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTaGCTTCTCCACTTTGGTGCATCCGCTCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: LSWKPLRTPERS*LLHFGASAPPP
Trigger: TGGGGGTGGAGCGGATGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTTCCCTCTGCCTCTTaGTCCCTGCCTTACTCTATT +
Preference number: 4 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPAFPSAS*SLPYSI
Trigger: AATAGAGTAAGGCAGGGATCAAGAGGCAGAGGGAAA...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR TCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGGTCTCTGGGTCATACTaGCCATCTGGCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRVSGSY*PSGISA
Trigger: GGCAGAGATGCCAGATGGTCAGTATGACCCAGAGAC...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCTCCTGCCCAACTCGGTaGAGATGGCATCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDISCPTR*RWHPGR
Trigger: ACGCCCTGGATGCCATCTTCACCGAGTTGGGCAGGA...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGCTGAGATCCATCAAGTaGGGCCAGCCGGTATCTGTC +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQLRSIK*GQPVSV
Trigger: GACAGATACCGGCTGGCCTCACTTGATGGATCTCAG...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTGCCCAGCTCAGTACTaGGATCCATCAAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFCPAQY*DPSSEA
Trigger: GGCCTCACTTGATGGATCTCAGTACTGAGCTGGGCA...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACCATTTTTGTACCAGGTaGCCTGGGGTGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHHFCTR*PGVVVR
Trigger: CCTCACCACCACCCCAGGTCACCTGGTACAAAAATG...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCAGACAAGTTCTGGATaGTCACTTCCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCQTSSG*SLPPGP
Trigger: AGGGCCTGGTGGAAGTGATCATCCAGAACTTGTCTG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTAGATCTGTTGAGAGCTaGCGGACTTCCTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLRSVES*RTSFPA
Trigger: TGCAGGGAAGGAAGTCCGGCAGCTCTCAACAGATCT...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACTCCCCCTCACTTCCATaGGGTATCGGTCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNSPSLP*GIGQGR
Trigger: CCTTCCTTGACCGATACCGCATGGAAGTGAGGGGGA...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTTGGGCTCGTCCCCGTaGTTGAACACACTGATGGTG +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRLGSSP*LNTLMV
Trigger: CACCATCAGTGTGTTCAAGCACGGGGACGAGCCCAA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCTCCTTGTTCTCTTCTTaGCCTCGGCTCAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSSLFSS*PRLSGH
Trigger: GTGCCCGCTGAGCCGAGGGCAAGAAGAGAACAAGGA...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGCACCTCCCAAGCTGTaGGGCAGAGTCATGGTTACG +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIAPPKL*GRVMVT
Trigger: CGTAACCATGACTCTGCCGCACAGCTTGGGAGGTGC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCTCACAAGCACGTAGGTaGTCTGTTCCCGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCASQARR*SVPGVR
Trigger: TCGGACCCCGGGAACAGAGCACCTACGTGCTTGTGA...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCAAACAGGCTGCTGGGTaGCGACAGCTCGCCAACACC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIKQAAG*RQLANT
Trigger: GGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTT...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACTGGTGTTGGTCACCTTaGACGTCAGCTGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHWCWSP*TSAALG
Trigger: GCCAAGTGCAGCTGACGTGCAAGGTGACCAACACCA...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCCGTTCCCGTCTCTaGGTCATACTGACCATCTGG +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFSRSRL*VILTIW
Trigger: CCAGATGGTCAGTATGACCCAGAGACGGGAACGGGA...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCCCCCTGGATTTTCAGTaGAGTTGCAGAGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFPLDFQ*SCREGT
Trigger: GGTGCCCTCTCTGCAACTCCACTGAAAATCCAGGGG...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGGACTCAGACTGTGCCTaGACACACGCTGTCACATGC +
Preference number: 4 (lower is better)
Translates to: STEIHQVRPAGICHTRQRDSDCA*THAVTC
Trigger: GCATGTGACAGCGTGTGTCCAGGCACAGTCTGAGTC...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCGTGATCTGCCCGCCTTaGCCTCCCAAACTACTGGGA +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCAVICPP*PPKLLG
Trigger: TCCCAGTAGTTTGGGAGGCCAAGGCGGGCAGATCAC...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCCCGTGCTGGAAGCCCTaGAGGTTACCAGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIPCWKP*RLPAPS
Trigger: GCTTGGAGCTGGTAACCTCCAGGGCTTCCAGCACGG...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCAGCTCCTTGGCCTCCTaGACCTTCTCCTCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDISSLAS*TFSSVR
Trigger: GCGGACAGAGGAGAAGGTCCAGGAGGCCAAGGAGCT...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCCCTTCGACGAGGCCTTaGATTGGGCACCGACAAGTC +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIPSTRP*IGHRQV
Trigger: GACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGG...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCCACGTCAGCTGCACTTaGCAGTCCTCCGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCAHVSCT*QSSVTF
Trigger: GAAGGTCACGGAGGACTGCCAAGTGCAGCTGACGTG...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
3UTR CAA 72 bp GCCTCTTTGCAAGCAGAACCTGCTTATCAGCTGCCTTaGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: ASLQAEPAYQLP*CSQLHPQPPTC
Trigger: GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCAAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGTCTGAGTTTACTGAATaGATATGCTTCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQSEFTE*ICFWES
Trigger: GCTCTCCCAGAAGCATATTCATTCAGTAAACTCAGA...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR TCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGTATTTGCCCTTGTCTaGGTCTTTGGGGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCVFALV*VFGVQD
Trigger: ATCCTGGACCCCAAAGACTCAGACAAGGGCAAATAC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTGCCCAGCTCAGTACTaGGATCCATCAAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIICPAQY*DPSSEA
Trigger: GGCCTCACTTGATGGATCTCAGTACTGAGCTGGGCA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACCATCATGGTCACCCATaGCAACCAACTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHHHGHP*QPTLRP
Trigger: AGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATG...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACGCCACTACCTATGACTaGCTTCTCCAGGGAGTACGT +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHATTYD*LLQGVR
Trigger: ACGTACTCCCTGGAGAAGTCAGTCATAGGTAGTGGC...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGGACAACTCTTCAATaGAGAGAAGTCCCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLWTTLQ*REVPFP
Trigger: CGGGAACGGGACTTCTCTGCATTGAAGAGTTGTCCA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGTTTCCAGAGTGTATTTaGCCTTGTCTGAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQFPECI*PCLSLW
Trigger: CCAAAGACTCAGACAAGGGCAAATACACTCTGGAAA...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCTGGTGTTCAGCCATTaGATCCTCAAAAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCLVFSH*ILKSLP
Trigger: GGGCAAGCTTTTGAGGATGCAATGGCTGAACACCAG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCTCCCCCTCACTTCCATaGGGTATCGGTCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSSPSLP*GIGQGR
Trigger: CCTTCCTTGACCGATACCGCATGGAAGTGAGGGGGA...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCACACACGCTGTCACATaGTCTTCAGCTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFTHAVT*SSAPWA
Trigger: AGCCCAAGGAGCTGAAGAGCATGTGACAGCGTGTGT...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGACTAGACTCAGACTGTaGCTGGACACACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRTRLRL*LDTRCH
Trigger: GTGACAGCGTGTGTCCAGGCACAGTCTGAGTCTAGT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTaGTTCTCCACTTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGPQKDL*FSTLVH
Trigger: ATGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGG...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCTCCCGTTCCCGTCTCTaGGTCATACTGACCATCTGG +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSSRSRL*VILTIW
Trigger: CCAGATGGTCAGTATGACCCAGAGACGGGAACGGGA...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCCTTCCTCGGTCCCCTaGATTTTCAGTGGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNPSSVP*IFSGVA
Trigger: TGCAACTCCACTGAAAATCCAGGGGACCGAGGAAGG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGACTCAGACTGTGCCTaGACACACGCTGTCACATGC +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIDSDCA*THAVTC
Trigger: GCATGTGACAGCGTGTGTCCAGGCACAGTCTGAGTC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGGCACTTTTGACATCTaGGGTCGGATAATTCTATGT +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQGTFDI*GRIILC
Trigger: ACATAGAATTATCCGACCCCAGATGTCAAAAGTGCC...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGCCACCTCGCCCAGCCTaGATGAAGGTGTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQPPRPA*MKVFSK
Trigger: CTTTGAAAACACCTTCATCCAGGCTGGGCGAGGTGG...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCGGGTTTCGTCATGTTaGCCAGGCTGGTCTAAAACT +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCRVSSC*PGWSKT
Trigger: AGTTTTAGACCAGCCTGGCCAACATGACGAAACCCG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCCTCCGGGCTGCATCATaGTCACCCATGACAACCAAC +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCALRAAS*SPMTTN
Trigger: GTTGGTTGTCATGGGTGACCATGATGCAGCCCGGAG...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTCGCTCAGGCCATACTaGTTCATTGCTCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQSLRPY*FIARTL
Trigger: CAGAGTGCGAGCAATGAACCAGTATGGCCTGAGCGA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGGCAGCACCAGGGATGTaGCCCGCACCTCGGATGCCC +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEAAPGM*PAPRMP
Trigger: GGGCATCCGAGGTGCGGGCCACATCCCTGGTGCTGC...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACTCCTCGGTTAGCGTGTaGCTTGCGGAGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNSSVSV*LAEMSS
Trigger: TGAAGACATCTCCGCAAGCCACACGCTAACCGAGGA...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGAGCGAGTCTCCTTCTTaGTGTTGGTCACCTTGCACG +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRSESPS*CWSPCT
Trigger: CGTGCAAGGTGACCAACACCAAGAAGGAGACTCGCT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGATCGGTCAAGGAAGGTaGCAGGCTGGTCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQIGQGR*QAGHSS
Trigger: TGAAGAATGACCAGCCTGTCACCTTCCTTGACCGAT...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGAGATCTCCTTGTTGTTaGAGATTAGATGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RVSYSRSRVHPALLEATQRSPCC*RLDVAQ
Trigger: CTGAGCTACATCTAATCTTCAACAACAAGGAGATCT...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACTCTCTCGGTCAAAATTaGTTTTGCGGTTCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNSLGQN*FCGSAS
Trigger: GCTCGCCGAACCGCAAAATCAATTTTGACCGAGAGA...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCACCATGTGTCTCCTCTaGTGGCCTCTGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSTMCLL*WPLDSE
Trigger: TTCAGAGTCCAGAGGCCAGCAGAGGAGACACATGGT...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR GCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCACCATCTGGCATCTCTaGCCTCTGGAAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCATIWHL*PLEEPL
Trigger: CAGTGGTTCTTCCAGAGGGCAGAGATGCCAGATGGT...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCACTAGACTCAGACTGTaGCTGGACACACGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSTRLRL*LDTRCH
Trigger: GTGACAGCGTGTGTCCAGGCACAGTCTGAGTCTAGT...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACAACCTGCTTATCAGCTaGCTTTGTGTTCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHNLLIS*LCVPSS
Trigger: GGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTT...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGGGACTGAGGCCTCTTTaGAAGCAGAACCTGCTTATC +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQGLRPL*KQNLLI
Trigger: GATAAGCAGGTTCTGCTTGCAAAGAGGCCTCAGTCC...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCGGACTGAGGCCTCTTTaGAAGCAGAACCTGCTTATC +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFGLRPL*KQNLLI
Trigger: GATAAGCAGGTTCTGCTTGCAAAGAGGCCTCAGTCC...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCACAACAGAAGCAGTGTaGCCACTTAGGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFTTEAV*PLRSLW
Trigger: CCAGAGACTCCTAAGTGGGCACACTGCTTCTGTTGT...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCCTTCTCTTAGCATCTaGCTTCCTCAGAAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLPSLSI*LPQKLV
Trigger: GACAAGCTTCTGAGGAAGGCAGATGCTAAGAGAAGG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACATGTGTCTCCTCTGCTaGCCTCTGGACTCTGAATTC +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNMCLLC*PLDSEF
Trigger: GAATTCAGAGTCCAGAGGCCAGCAGAGGAGACACAT...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGTCATACTGACCATCTaGCATCTCTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNVILTI*HLCPLE
Trigger: TTCCAGAGGGCAGAGATGCCAGATGGTCAGTATGAC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGAGGAAGGTGACAGGCTaGTCATTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: STEIHQVRPAGICHTRQRRKVTG*SFFSQE
Trigger: CTCTTGGCTGAAGAATGACCAGCCTGTCACCTTCCT...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACAGGAAGGTGACAGGCTaGTCATTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHRKVTG*SFFSQE
Trigger: CTCTTGGCTGAAGAATGACCAGCCTGTCACCTTCCT...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTCATGTTGGCCAGGCTaGTCTAAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQSCWPG*SKTPDL
Trigger: GAGGTCAGGAGTTTTAGACCAGCCTGGCCAACATGA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACTCATGTTGGCCAGGCTaGTCTAAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHSCWPG*SKTPDL
Trigger: GAGGTCAGGAGTTTTAGACCAGCCTGGCCAACATGA...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCCGGGTTTCGTCATGTTaGCCAGGCTGGTCTAAAACT +
Preference number: 4 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFRVSSC*PGWSKT
Trigger: AGTTTTAGACCAGCCTGGCCAACATGACGAAACCCG...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTGCATCGGACGTTCAGTaGGGAGCCTGGGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCASDVQ*GAWGPG
Trigger: CCCGGGGCCCCAGGCTCCCCACTGAACGTCCGATGC...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGAGGAGGGAGGGTAGCTaGCGGGCCCCGCAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELRREGS*RAPQGD
Trigger: ATCGCCTTGCGGGGCCCGCCAGCTACCCTCCCTCCT...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGACCAGCTGAATTCATaGCCTGTACCTGGAACACGT +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNDQLNS*PVPGTR
Trigger: ACGTGTTCCAGGTACAGGCCATGAATTCAGCTGGTC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGCAGGGCTTTCCGAGCTaGTGGCCTCCCAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELQGFPS*WPPRCH
Trigger: GTGGCACCTGGGAGGCCATCAGCTCGGAAAGCCCTG...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGGGGTTTCTGATCTCATaGCTCAGCTTCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: STEIHQVRPAGICHTRQRGFLIS*LSFFSF
Trigger: GAAGCTGAAGAAGCTGAGTCATGAGATCAGAAACCC...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGGCTCTTCTTCGCTGCTaGGGAAGGTCCGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEALLRC*GRSASA
Trigger: TGCGGAGGCGGACCTTCCGCAGCAGCGAAGAAGAGC...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGAAGCCCACCCGCTTCTaGCCTCGCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELKPTRF*PRSSSS
Trigger: GGAGCTGGAGGAGCGAGGGCAGAAGCGGGTGGGCTT...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGATGCTGTTTTCCAATaGTCCTGCCTTGAACATGGG +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNDAVFQ*SCLEHG
Trigger: CCCATGTTCAAGGCAGGACCATTGGAAAACAGCATC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACTTTTTGGCTCAATCTTaGCTCATCACAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHFLAQS*LITTSA
Trigger: GGCGGAGGTTGTGATGAGCCAAGATTGAGCCAAAAA...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTTTTTGGCTCAATCTTaGCTCATCACAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQFLAQS*LITTSA
Trigger: GGCGGAGGTTGTGATGAGCCAAGATTGAGCCAAAAA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGGCAGAGGCCCCGTGCTaGAAGCCCTGGAGGTTACCA +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEAEAPC*KPWRLP
Trigger: TGGTAACCTCCAGGGCTTCCAGCACGGGGCCTCTGC...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGGGTGGTGGTGAGGCCTaGACAGTGCAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEGGGEA*TVQVSR
Trigger: CCTGCTGACCTGCACTGTCCAGGCCTCACCACCACC...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCATAACCCAGGAGCTCTaGGTCTTTCACAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: CKQNLLISCLCVPSSILSITQEL*VFHRIP
Trigger: TGGGATCCTGTGAAAGACCCAGAGCTCCTGGGTTAT...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCTGGCCTCTGGACTCTaGATTCTTGCTAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRLASGL*ILANGF
Trigger: AAAACCATTAGCAAGAATTCAGAGTCCAGAGGCCAG...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR GCA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGTCAAGCATGAGGGATaGTGTTTTCCAATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIVKHEG*CFPMVL
Trigger: CAGGACCATTGGAAAACAGCATCCCTCATGCTTGAC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR GCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCCCGGACTTCCTTCCCTaGAGCTATTTCCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIPDFLP*SYFQSV
Trigger: TACACTCTGGAAATAGCTGCAGGGAAGGAAGTCCGG...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCCTGGTGTTCAGCCATTaGATCCTCAAAAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDILVFSH*ILKSLP
Trigger: GGGCAAGCTTTTGAGGATGCAATGGCTGAACACCAG...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCCCCAGAAAGATCTTTaGTTCTCCACTTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRPQKDL*FSTLVH
Trigger: ATGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGG...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGCCATACTGGTTCATTaGTCGCACTCTGAAGACATA +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNAILVH*SHSEDI
Trigger: TATGTCTTCAGAGTGCGAGCAATGAACCAGTATGGC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCAGCGAGTCTCCTTCTTaGTGTTGGTCACCATGTGTC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDISESPS*CWSPCV
Trigger: GACACATGGTGACCAACACCAAGAAGGAGACTCGCT...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGAAGGTTTTCAGTCTCTaGTGTTCAGCCATTGCATCC +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRKVFSL*CSAIAS
Trigger: GGATGCAATGGCTGAACACCAGAGACTGAAAACCTT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTCGGATAATTCTATGTaGTGGGAGCTGCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLSDNSM*WELQCL
Trigger: TAAACACTGCAGCTCCCACCACATAGAATTATCCGA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGCAAACGTCGATCTTTTaGAGATCTCTGAATCGAAGC +
Preference number: 4 (lower is better)
Translates to: STEIHQVRPAGICHTRQRQTSIF*RSLNRS
Trigger: GCTTCGATTCAGAGATCTTCAAAAGATCGACGTTTG...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACTCATTGCTCGCACTCTaGAGACATACGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHSLLAL*RHTTSF
Trigger: AAAAGAAGTCGTATGTCTTCAGAGTGCGAGCAATGA...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGGCTTCTCCACTTTGGTaGATCCGCTCCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELASPLW*IRSTPT
Trigger: GGTGGGGGTGGAGCGGATGCACCAAAGTGGAGAAGC...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACATCCTAAAAGAGGGGTaGGATGTATCAGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNILKEG*DVSVYG
Trigger: GCCATAAACTGATACATCGCACCCCTCTTTTAGGAT...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCCTCGGAACCACTGGATaGTCTCAGCATCTAACACAT +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDILGTTG*SQHLTH
Trigger: ATGTGTTAGATGCTGAGAGCATCCAGTGGTTCCGAG...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCTTCCCTTGTCCTTTTTaGACAACTCTTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCFPCPF*TTLQCR
Trigger: TCTGCATTGAAGAGTTGTCCAAAAAGGACAAGGGAA...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACAGACGTTTGTCTTTGTaGAACCAGGTGGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHRRLSL*NQVVFM
Trigger: CATGAAAACCACCTGGTTCCACAAAGACAAACGTCT...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGACACTGATGGTGACCTaGCCCGTCTCGGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLETLMVT*PVSEPY
Trigger: GTATGGCTCCGAGACGGGCCAGGTCACCATCAGTGT...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTCGGATAATTCTATGTaGTGGGAGCTGCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRSDNSM*WELQCL
Trigger: TAAACACTGCAGCTCCCACCACATAGAATTATCCGA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGCCAACTCTGAGGCCTTaGAGGGGACGCTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELPTLRP*RGRCCL
Trigger: TAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGG...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGGTAAACCTGGTGCCTTaGATGGGTTTGTTGTTAACT +
Preference number: 4 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRVNLVP*MGLLLT
Trigger: AGTTAACAACAAACCCATCCAAGGCACCAGGTTTAC...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCAGACGTTTGTCTTTGTaGAACCAGGTGGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCARRLSL*NQVVFM
Trigger: CATGAAAACCACCTGGTTCCACAAAGACAAACGTCT...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCGGCACTTTTGACATCTaGGGTCGGATAATTCTATGT +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCAGTFDI*GRIILC
Trigger: ACATAGAATTATCCGACCCCAGATGTCAAAAGTGCC...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGCGGATCTCGCTGGCATaGACATTGGTTGGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELRISLA*TLVGGE
Trigger: CTCACCGCCAACCAATGTCCATGCCAGCGAGATCCG...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGCCAACCTCGATCTCATaGGCACCTGGCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELPTSIS*APGLSS
Trigger: GGAGGACAAGCCAGGTGCCCATGAGATCGAGGTTGG...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACGATCAGTTTGATCACTaGGTTTCTGATCTCATGACT +
Preference number: 4 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHDQFDH*VSDLMT
Trigger: AGTCATGAGATCAGAAACCCAGTGATCAAACTGATC...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGTTGGGGTCCAGGATGTaGAGCCAGATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELLGSRM*SQISSR
Trigger: CCTGGATGAGATCTGGCTTCACATCCTGGACCCCAA...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCATCCTAAAAGAGGGGTaGGATGTATCAGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIILKEG*DVSVYG
Trigger: GCCATAAACTGATACATCGCACCCCTCTTTTAGGAT...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTAGCCATACTTGTTCTTaGCGAAGACGCCGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCSHTCS*RRRRSG
Trigger: GCCGCTACGGCGTCTTCGTCAAGAACAAGTATGGCT...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCTCTGTTGAACTTACATaGATTGAAACTATGGGATCC +
Preference number: 4 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCASVELT*IETMGS
Trigger: GGATCCCATAGTTTCAATTCATGTAAGTTCAACAGA...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGAGGTGCCACTACCTATaGCTGACTTCTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELRCHYL*LTSPGS
Trigger: ACTCCCTGGAGAAGTCAGTCATAGGTAGTGGCACCT...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGGGGGTTTCCACCCAATaGCCATTTCATTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELGVSTQ*PFHSSR
Trigger: GCGGGAAGAATGAAATGGTCATTGGGTGGAAACCCC...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGACACACGCTGTCACATaGTCTTCAGCTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELTHAVT*SSAPWA
Trigger: AGCCCAAGGAGCTGAAGAGCATGTGACAGCGTGTGT...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCAAGGACCTTAGGCTTTaGAATCAGATAGACTTGTTC +
Preference number: 4 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIKDLRL*NQIDLF
Trigger: GAACAAGTCTATCTGATTCCAAAGCCTAAGGTCCTT...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTGTGCGGCAGAGTCATaGTTACGAGAGCAACAACAG +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLECAAES*LREQQQ
Trigger: CTGTTGTTGCTCTCGTAACCATGACTCTGCCGCACA...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
3UTR CAA 72 bp TTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTaGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTG +
Preference number: 4 (lower is better)
Translates to: FIIFIMSCLVLE*FAPRSVSPTGL
Trigger: CAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGATCGGTCAAGGAAGGTaGCAGGCTGGTCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELIGQGR*QAGHSS
Trigger: TGAAGAATGACCAGCCTGTCACCTTCCTTGACCGAT...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGAGGTCTGTGTGTCTCTaGAAGCTTGAACTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLERSVCL*KLELEL
Trigger: CAGCTCAAGTTCAAGCTTTCAGAGACACACAGACCT...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR TCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGATCAGTGACTATGACTaGGTAGGTGCCCAAATCCTC +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEISDYD*VGAQIL
Trigger: GAGGATTTGGGCACCTACTCAGTCATAGTCACTGAT...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGGATTCATCAATGTCCTaGCCCATCCGGGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELDSSMS*PIRVKH
Trigger: ATGCTTGACCCGGATGGGGCAGGACATTGATGAATC...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR GCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTGGTCTCCTGAGACGATaGAAGTCAAGCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCGLLRR*KSSTGS
Trigger: AGACCCTGTGCTTGACTTGCATCGTCTCAGGAGACC...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGGTCATACTGACCATCTaGCATCTCTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELVILTI*HLCPLE
Trigger: TTCCAGAGGGCAGAGATGCCAGATGGTCAGTATGAC...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTAGATCTCATCCAGGGTaGTGCCCGTCCTTATCCGAT +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCRSHPG*CPSLSD
Trigger: ATCGGATAAGGACGGGCACCACCCTGGATGAGATCT...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTTTTCCATCTTGGAGTTaGGCGGTGTACGACCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCFPSWS*AVYDPL
Trigger: CAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAA...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR GCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTAACCTGCTTATCAGCTaGCTTTGTGTTCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCNLLIS*LCVPSS
Trigger: GGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTT...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTAGACTTGTTCAAACCTaGGCTCTCCCTCTTACCGTG +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCRLVQT*ALPLTV
Trigger: CACGGTAAGAGGGAGAGCCCAGGTTTGAACAAGTCT...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGCAGTACCGTGCAGAGTaGCACAAAATAGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELQYRAE*HKIDAL
Trigger: CAGAGCATCTATTTTGTGCCACTCTGCACGGTACTG...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTCCATCTCGGAACCACTaGATGCTCTCAGCATCTAAC +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCPSRNH*MLSASN
Trigger: GTTAGATGCTGAGAGCATCCAGTGGTTCCGAGATGG...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTTCTCCTTCTTGGTGTTaGTCACCTTGCACGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCSPSWC*SPCTSA
Trigger: AGCTGACGTGCAAGGTGACCAACACCAAGAAGGAGA...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGAAGGTTTTCAGTCTCTaGTGTTCAGCCATTGCATCC +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELKVFSL*CSAIAS
Trigger: GGATGCAATGGCTGAACACCAGAGACTGAAAACCTT...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CAA 72 bp TCCTCAGCCTCCCACATGCTAGACTTCAGGTGTCTGTaGAACTTACATGAATTGAAACTATGGGATCCTAAA +
Preference number: 4 (lower is better)
Translates to: SSASHMLDFRCL*NLHELKLWDPK
Trigger: TTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAGACACCTGAAGTCTAGCATGTGGGAGGCTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR GCA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGTTTCCAGAGTGTATTTaGCCTTGTCTGAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELFPECI*PCLSLW
Trigger: CCAAAGACTCAGACAAGGGCAAATACACTCTGGAAA...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
3UTR CAA 72 bp ATGCTAGACTTCAGGTGTCTGTTGAACTTACATGAATaGAAACTATGGGATCCTAAAAGAGGGGTGCGATGT +
Preference number: 4 (lower is better)
Translates to: MLDFRCLLNLHE*KLWDPKRGVRC
Trigger: ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAGACACCTGAAGTCTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR TCA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTCTGTTGAACTTACATaGATTGAAACTATGGGATCC +
Preference number: 4 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLESVELT*IETMGS
Trigger: GGATCCCATAGTTTCAATTCATGTAAGTTCAACAGA...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CCA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTTTCCCTTGTCCTTTTTaGACAACTCTTCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCFPCPF*TTLQCR
Trigger: TCTGCATTGAAGAGTTGTCCAAAAAGGACAAGGGAA...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp CGCCGCCTCAGCGTCTTCCAGTCCCGCCTCTGGCGCAGCAGCCGGTaGGTCTGCAGGAAGGCGATCTCAGTCCTCTCCCAGTCATTGCCG +
Preference number: 5 (lower is better)
Translates to: RRLSVFQSRLWRSSR*VCRKAISVLSQSLP
Trigger: CGGCAATGACTGGGAGAGGACTGAGATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCAGAGGCGGGACTGGAAGACGCTGAGGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 90 bp TCCAGAACCAGGGCCCGCGGCCGTAGCACAGCTCCCTCAGCTCCTTaGCCTCCTGGACCTTCTCCTCTGTCCGCCGCCTCAGCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SRTRARGRSTAPSAP*PPGPSPLSAASASS
Trigger: GGAAGACGCTGAGGCGGCGGACAGAGGAGAAGGTCCAGGAGGCCAAGGAGCTGAGGGAGCTGTGCTACGGCCGCGGGCCCTGGTTCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 90 bp GCCGGTGGGTCTGCAGGAAGGCGATCTCAGTCCTCTCCCAGTCATTaGCGAAGCCCACCCGCTTCTGCCCTCGCTCCTCCAGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: AGGSAGRRSQSSPSH*RSPPASALAPPAPR
Trigger: CCGTGGAGCTGGAGGAGCGAGGGCAGAAGCGGGTGGGCTTCGGCAATGACTGGGAGAGGACTGAGATCGCCTTCCTGCAGACCCACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 90 bp ACCTTCTCCTCTGTCCGCCGCCTCAGCGTCTTCCAGTCCCGCCTCTaGCGCAGCAGCCGGTGGGTCTGCAGGAAGGCGATCTCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: TFSSVRRLSVFQSRL*RSSRWVCRKAISVL
Trigger: GAGGACTGAGATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCAGAGGCGGGACTGGAAGACGCTGAGGCGGCGGACAGAGGAGAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 90 bp CCTGGGGTGGTGGTGAGGCCTGGACAGTGCAGGTCAGCAGGACCGTaGTGTGCTCCCAGACGGCGTGGGAGCGAAGAGGGATCCAGAACC +
Preference number: 5 (lower is better)
Translates to: PGVVVRPGQCRSAGP*CAPRRRGSEEGSRT
Trigger: GGTTCTGGATCCCTCTTCGCTCCCACGCCGTCTGGGAGCACACCACGGTCCTGCTGACCTGCACTGTCCAGGCCTCACCACCACCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 90 bp GGCTTCCCAAGACAGCTCGGAGGAGGCCGTCAGAGCCAGGGCTGCTaGCAGGGCGTAGTCCGCGGCGCTGAACTCATGCTCTTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: GFPRQLGGGRQSQGC*QGVVRGAELMLFFA
Trigger: AGCGAAGAAGAGCATGAGTTCAGCGCCGCGGACTACGCCCTGGCAGCAGCCCTGGCTCTGACGGCCTCCTCCGAGCTGTCTTGGGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 90 bp CTCAGCGTCTTCCAGTCCCGCCTCTGGCGCAGCAGCCGGTGGGTCTaGAGGAAGGCGATCTCAGTCCTCTCCCAGTCATTGCCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LSVFQSRLWRSSRWV*RKAISVLSQSLPKP
Trigger: GGGCTTCGGCAATGACTGGGAGAGGACTGAGATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCAGAGGCGGGACTGGAAGACGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 90 bp GGGGGCCTGGCTGGGGCATTGTCCACTCTTTGCACTCAAACAGGCTaGTGGGTGCCGACAGCTCGCCAACACCTGCCCAGTTGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GGLAGALSTLCTQTG*WVPTARQHLPSWQP
Trigger: GGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGTGCAAAGAGTGGACAATGCCCCAGCCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 90 bp AGGGAGGTTTGCAGGCTGGACCTGCCCTTGGACTCACCCAGAGCCTaGTTGACCCTGATGGGCTCGGTGGCGGCTGAGCTCTCGCCTACC +
Preference number: 5 (lower is better)
Translates to: REVCRLDLPLDSPRA*LTLMGSVAAELSPT
Trigger: GGTAGGCGAGAGCTCAGCCGCCACCGAGCCCATCAGGGTCAAGCAGGCTCTGGGTGAGTCCAAGGGCAGGTCCAGCCTGCAAACCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp ACGAGGCCTTGGATTGGGCACCGACAAGTCCCTCCGGGGGCCTCATaGCAGGCGATCCATTCCCCAGACTCGCCCTGGCACCGCTCAATG +
Preference number: 5 (lower is better)
Translates to: TRPWIGHRQVPPGAS*QAIHSPDSPWHRSM
Trigger: CATTGAGCGGTGCCAGGGCGAGTCTGGGGAATGGATCGCCTGCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 90 bp GGCCTGGCTGGGGCATTGTCCACTCTTTGCACTCAAACAGGCTGCTaGGTGCCGACAGCTCGCCAACACCTGCCCAGTTGGCAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: GLAGALSTLCTQTGC*VPTARQHLPSWQPG
Trigger: CCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGTGCAAAGAGTGGACAATGCCCCAGCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 90 bp TGGCTGGGGCATTGTCCACTCTTTGCACTCAAACAGGCTGCTGGGTaGCGACAGCTCGCCAACACCTGCCCAGTTGGCAGCCCGGGCACG +
Preference number: 5 (lower is better)
Translates to: WLGHCPLFALKQAAG*RQLANTCPVGSPGT
Trigger: CGTGCCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGTGCAAAGAGTGGACAATGCCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp CTGACTTCTCCAGGGAGTACGTCAGTGGTGCTCTGTCCCGGGGGCTaGGCTCCTCCCAGGCCAGAACCACATAGGCCTCTCGGATCTCGC +
Preference number: 5 (lower is better)
Translates to: LTSPGSTSVVLCPGG*APPRPEPHRPLGSR
Trigger: GCGAGATCCGAGAGGCCTATGTGGTTCTGGCCTGGGAGGAGCCCAGCCCCCGGGACAGAGCACCACTGACGTACTCCCTGGAGAAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 90 bp CCACCTTCCAGCCCTACCTTGCAGACCCGGGTGGGGATGGGCTGCTaGTTGACCGCATGCCAGTCCAGCTCTTCCGAGTCATGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PPSSPTLQTRVGMGC*LTACQSSSSESCWS
Trigger: GGACCAGCATGACTCGGAAGAGCTGGACTGGCATGCGGTCAATCAGCAGCCCATCCCCACCCGGGTCTGCAAGGTAGGGCTGGAAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 90 bp GATGTGATCTATGAGCCCCAGCTCCCTGCCCAGCCCAGGGAGGTTTaGAGGCTGGACCTGCCCTTGGACTCACCCAGAGCCTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: DVIYEPQLPAQPREV*RLDLPLDSPRACLT
Trigger: GGTCAAGCAGGCTCTGGGTGAGTCCAAGGGCAGGTCCAGCCTGCAAACCTCCCTGGGCTGGGCAGGGAGCTGGGGCTCATAGATCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp TCTCACCCGGAACCGATAGCTCTGACCTTCGACGAGGCCTTGGATTaGGCACCGACAAGTCCCTCCGGGGGCCTCATGGCAGGCGATCCA +
Preference number: 5 (lower is better)
Translates to: SHPEPIALTFDEALD*APTSPSGGLMAGDP
Trigger: TGGATCGCCTGCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGTCAGAGCTATCGGTTCCGGGTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS-3UTR CAA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGGCTCGTCCCCGTGCTaGAACACACTGATGGTGACC +
Preference number: 5 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLGSSPC*NTLMVT
Trigger: GGTCACCATCAGTGTGTTCAAGCACGGGGACGAGCC...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGCACGTCAGCTGCACTaGGCAGTCCTCCGTGACCTT +
Preference number: 5 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLARQLH*AVLRDL
Trigger: AAGGTCACGGAGGACTGCCAAGTGCAGCTGACGTGC...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp CAACCAACTCTGAGGCCTTGGAGGGGACGCTGCTGCCTACCCTGCTaGTGGCTCTCACCCGGAACCGATAGCTCTGACCTTCGACGAGGC +
Preference number: 5 (lower is better)
Translates to: QPTLRPWRGRCCLPC*WLSPGTDSSDLRRG
Trigger: GCCTCGTCGAAGGTCAGAGCTATCGGTTCCGGGTGAGAGCCATCAGCAGGGTAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 90 bp CTTCCAGCCCTACCTTGCAGACCCGGGTGGGGATGGGCTGCTGATTaGCCGCATGCCAGTCCAGCTCTTCCGAGTCATGCTGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LPALPCRPGWGWAAD*PHASPALPSHAGPG
Trigger: TCCTGGACCAGCATGACTCGGAAGAGCTGGACTGGCATGCGGTCAATCAGCAGCCCATCCCCACCCGGGTCTGCAAGGTAGGGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp GAAACTGACGTGATAGCCTGTGACAGGCCCAGCCCCCATATACAGTaGGGGTTCCCACTGCAGCACCAGGGATGTGGCCCGCACCTCGGA +
Preference number: 5 (lower is better)
Translates to: ETDVIACDRPSPHIQ*GFPLQHQGCGPHLG
Trigger: TCCGAGGTGCGGGCCACATCCCTGGTGCTGCAGTGGGAACCCCCACTGTATATGGGGGCTGGGCCTGTCACAGGCTATCACGTCAGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp TGGCTGCAAGTCGGAAACCCTCAGGTGGGTGCCAGAGATGGGGCCTaGGGTGACCGGCTTCCACTGCTCAGAGCCTTCCTCCTGGAAACT +
Preference number: 5 (lower is better)
Translates to: WLQVGNPQVGARDGA*GDRLPLLRAFLLET
Trigger: AGTTTCCAGGAGGAAGGCTCTGAGCAGTGGAAGCCGGTCACCCCAGGCCCCATCTCTGGCACCCACCTGAGGGTTTCCGACTTGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp CTCCAGTTTCCCTCAGAGGGCGTATGTGCCACTGGCCACCAGGACTaGGCCCTCCAAGATGTGATCTATGAGCCCCAGCTCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LQFPSEGVCATGHQD*ALQDVIYEPQLPAQ
Trigger: CTGGGCAGGGAGCTGGGGCTCATAGATCACATCTTGGAGGGCCCAGTCCTGGTGGCCAGTGGCACATACGCCCTCTGAGGGAAACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS-3UTR CAA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTGGTGATCTGCCCGCCTaGGCCTCCCAAACTACTGGG +
Preference number: 5 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSGDLPA*ASQTTG
Trigger: CCCAGTAGTTTGGGAGGCCAAGGCGGGCAGATCACC...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCCAACACCTGCCCAGTaGGCAGCCCGGGCACGGAAC +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLPTPAQ*AARARN
Trigger: GTTCCGTGCCCGGGCTGCCAACTGGGCAGGTGTTGG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp ACGACCCTCTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTCATGGGCACCTGGCTaGTCCTCCAGGAGCACGGGA +
Preference number: 5 (lower is better)
Translates to: TTLCLPPWTTGGTFLGPASWAPG*SSRSTG
Trigger: TCCCGTGCTCCTGGAGGACAAGCCAGGTGCCCATGA...AGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAGAGGGTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 90 bp TTTGCACTCAAACAGGCTGCTGGGTGCCGACAGCTCGCCAACACCTaGCCAGTTGGCAGCCCGGGCACGGAACTCATAGAAGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FALKQAAGCRQLANT*PVGSPGTELIEVAF
Trigger: GAAGGCCACTTCTATGAGTTCCGTGCCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGTGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp CAAACAGGCTGCTGGGTGCCGACAGCTCGCCAACACCTGCCCAGTTaGCAGCCCGGGCACGGAACTCATAGAAGTGGCCTTCATGAAGGT +
Preference number: 5 (lower is better)
Translates to: QTGCWVPTARQHLPS*QPGHGTHRSGLHEG
Trigger: ACCTTCATGAAGGCCACTTCTATGAGTTCCGTGCCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp CATGGGCACCTGGCTTGTCCTCCAGGAGCACGGGATCAGTGGGCATaGACGGTTGCCCCAGACCAGCTGAATTCATGGCCTGTACCTGGA +
Preference number: 5 (lower is better)
Translates to: HGHLACPPGARDQWA*TVAPDQLNSWPVPG
Trigger: TCCAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCGTGCTCCTGGAGGACAAGCCAGGTGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGGCTCGTCCCCGTGCTaGAACACACTGATGGTGACC +
Preference number: 5 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGGSSPC*NTLMVT
Trigger: GGTCACCATCAGTGTGTTCAAGCACGGGGACGAGCC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGTTGGTGTTGGTCACCTaGCACGTCAGCTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLLVLVT*HVSCTW
Trigger: CCAAGTGCAGCTGACGTGCAAGGTGACCAACACCAA...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp TGTCTTCCTCCGGGCTGCATCATGGTCACCCATGACAACCAACTCTaGGGCCTTGGAGGGGACGCTGCTGCCTACCCTGCTGATGGCTCT +
Preference number: 5 (lower is better)
Translates to: CLPPGCIMVTHDNQL*GLGGDAAAYPADGS
Trigger: AGAGCCATCAGCAGGGTAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATGCAGCCCGGAGGAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 90 bp CAAAGGGGATCTCTGTCTTCCTCCGGGCTGCATCATGGTCACCCATaGCAACCAACTCTGAGGCCTTGGAGGGGACGCTGCTGCCTACCC +
Preference number: 5 (lower is better)
Translates to: QRGSLSSSGLHHGHP*QPTLRPWRGRCCLP
Trigger: GGGTAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATGCAGCCCGGAGGAAGACAGAGATCCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 90 bp GAGCCTCCTCTAGTTGGTGCCTGCCCTACTCCAGGGGTTTTTCCCTaGGCCAGTAGTATCTGTGCCTCAGGAGGGCATCGGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: EPPLVGACPTPGVFP*ASSICASGGHRSLR
Trigger: CCTGAGGCTCCGATGCCCTCCTGAGGCACAGATACTACTGGCTCAGGGAAAAACCCCTGGAGTAGGGCAGGCACCAACTAGAGGAGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 90 bp GACACACGCTGTCACATGCTCTTCAGCTCCTTGGGCTCGTCCCCGTaGTTGAACACACTGATGGTGACCTGGCCCGTCTCGGAGCCATAC +
Preference number: 5 (lower is better)
Translates to: DTRCHMLFSSLGSSP*LNTLMVTWPVSEPY
Trigger: GTATGGCTCCGAGACGGGCCAGGTCACCATCAGTGTGTTCAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCATGTGACAGCGTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp GTAGAGCCCCTCGTCCTCCTTGTAGGTGCAGGACACCTTCAGGGATaGCTGGCGGTCTGTGTAGAGGATCTTCCGACGTCTCGAGGACCT +
Preference number: 5 (lower is better)
Translates to: VEPLVLLVGAGHLQG*LAVCVEDLPTSRGP
Trigger: AGGTCCTCGAGACGTCGGAAGATCCTCTACACAGACCGCCAGGCATCCCTGAAGGTGTCCTGCACCTACAAGGAGGACGAGGGGCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 90 bp CGATCTCATGGGCACCTGGCTTGTCCTCCAGGAGCACGGGATCAGTaGGCATGGACGGTTGCCCCAGACCAGCTGAATTCATGGCCTGTA +
Preference number: 5 (lower is better)
Translates to: RSHGHLACPPGARDQ*AWTVAPDQLNSWPV
Trigger: TACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCGTGCTCCTGGAGGACAAGCCAGGTGCCCATGAGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGGTGATCTGCCCGCCTaGGCCTCCCAAACTACTGGG +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCGDLPA*ASQTTG
Trigger: CCCAGTAGTTTGGGAGGCCAAGGCGGGCAGATCACC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp TGGGCTCCTCCCAGGCCAGAACCACATAGGCCTCTCGGATCTCGCTaGCATGGACATTGGTTGGCGGTGAGGGGATGGTCACAGTATCTT +
Preference number: 5 (lower is better)
Translates to: WAPPRPEPHRPLGSR*HGHWLAVRGWSQYL
Trigger: AAGATACTGTGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGGCCTATGTGGTTCTGGCCTGGGAGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS-3UTR CAA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGTCTCCTTCTTGGTGTaGGTCACCATGTGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RVSYSRSRVHPALLEATQVSFLV*VTMCLL
Trigger: GAGGAGACACATGGTGACCAACACCAAGAAGGAGAC...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CAA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGAGACCTCTCACCACTTaGGCACGATTCTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLRPLTT*ARFFSM
Trigger: CATCGAGAAGAATCGTGCCAAAGTGGTGAGAGGTCT...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGTCTCGGAGCCATACTaGTTCTTGACGAAGACGCCG +
Preference number: 5 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGVSEPY*FLTKTP
Trigger: CGGCGTCTTCGTCAAGAACAAGTATGGCTCCGAGAC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTATGCTCTTCAGCTCCTaGGGCTCGTCCCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLMLFSS*GSSPCL
Trigger: CAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCAT...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGATGCCTTGTCCTGGAGTaGTTTGCGCCCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGCLVLE*FAPRSV
Trigger: AACAGACCTGGGCGCAAACAACTCCAGGACAAGGCA...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTAGGCCGAGAGGGTCCTaGTTCTCTTCTTGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLRPRGS*FSSCPR
Trigger: CCGAGGGCAAGAAGAGAACAAGGACCCTCTCGGCCT...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACGTCCTCTCCCAGTCATaGCCGAAGCCCACCCGCTTC +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNVLSQS*PKPTRF
Trigger: GAAGCGGGTGGGCTTCGGCAATGACTGGGAGAGGAC...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGCGACGAGGCCTTGGATaGGGCACCGACAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: STEIHQVRPAGICHTRQRRRGLG*GTDKSL
Trigger: GAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCG...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACGTAGCCAGAGCCTGCTaGACCCTGATGGGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHVARAC*TLMGSV
Trigger: CACCGAGCCCATCAGGGTCAAGCAGGCTCTGGCTAC...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp CAGGAGCACGGGATCAGTGGGCATGGACGGTTGCCCCAGACCAGCTaGATTCATGGCCTGTACCTGGAACACGTAACTCTTTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QEHGISGHGRLPQTS*IHGLYLEHVTLSWL
Trigger: CAGCCAGGAAAGAGTTACGTGTTCCAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp TGTCCTGCCCCATCCGGGTCAAGCATGAGGGATGCTGTTTTCCAATaGTCCTGCCTTGAACATGGGCTCCCAAGGCCCACAGAGACCACT +
Preference number: 5 (lower is better)
Translates to: CPAPSGSSMRDAVFQ*SCLEHGLPRPTETT
Trigger: AGTGGTCTCTGTGGGCCTTGGGAGCCCATGTTCAAGGCAGGACCATTGGAAAACAGCATCCCTCATGCTTGACCCGGATGGGGCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS CCA 90 bp CGGGATCAGTGGGCATGGACGGTTGCCCCAGACCAGCTGAATTCATaGCCTGTACCTGGAACACGTAACTCTTTCCTGGCTGCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: RDQWAWTVAPDQLNS*PVPGTRNSFLAASR
Trigger: CCGACTTGCAGCCAGGAAAGAGTTACGTGTTCCAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCACTCTCCAGACGTTaGTCTTTGTGGAACCAGGTG +
Preference number: 5 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSPLSRR*SLWNQV
Trigger: CACCTGGTTCCACAAAGACAAACGTCTGGAGAGTGG...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGAGAGTGTATTTGCCCTaGTCTGAGTCTTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: RVSYSRSRVHPALLEATQRVYLP*SESLGS
Trigger: GGACCCCAAAGACTCAGACAAGGGCAAATACACTCT...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGCCCTGAGAGATCTGTaGAGAGCTGCCGGACTTCCT +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCALRDL*RAAGLP
Trigger: AGGAAGTCCGGCAGCTCTCAACAGATCTCTCAGGGC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCATGCTCTTCAGCTCCTaGGGCTCGTCCCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFMLFSS*GSSPCL
Trigger: CAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCAT...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCACCAACTCTGAGGCCTaGGAGGGGACGCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: CKQNLLISCLCVPSSILSTNSEA*EGTLLP
Trigger: AGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGT...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp TGGTGTTGGTCACCTTGCACGTCAGCTGCACTTGGCAGTCCTCCGTaGCCTTCCACTGCAACGGCCGCTCAAAATAGGGACCCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: WCWSPCTSAALGSPP*PSTATAAQNRDPVF
Trigger: GAAAACAGGGTCCCTATTTTGAGCGGCCGTTGCAGTGGAAGGTCACGGAGGACTGCCAAGTGCAGCTGACGTGCAAGGTGACCAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 90 bp GCCCCATCCGGGTCAAGCATGAGGGATGCTGTTTTCCAATGGTCCTaGCTTGAACATGGGCTCCCAAGGCCCACAGAGACCACTTCATCA +
Preference number: 5 (lower is better)
Translates to: APSGSSMRDAVFQWS*LEHGLPRPTETTSS
Trigger: TGATGAAGTGGTCTCTGTGGGCCTTGGGAGCCCATGTTCAAGGCAGGACCATTGGAAAACAGCATCCCTCATGCTTGACCCGGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS CCA 90 bp CAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCTaGACACACGCTGTCACATGCTCTTCAGCTCCTTGGGCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: QVVPTGPCRLDSDCA*THAVTCSSAPWARP
Trigger: GGGACGAGCCCAAGGAGCTGAAGAGCATGTGACAGCGTGTGTCCAGGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp TTTCCCAGATCAAAGGGGATCTCTGTCTTCCTCCGGGCTGCATCATaGTCACCCATGACAACCAACTCTGAGGCCTTGGAGGGGACGCTG +
Preference number: 5 (lower is better)
Translates to: FPRSKGISVFLRAAS*SPMTTNSEALEGTL
Trigger: CAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATGCAGCCCGGAGGAAGACAGAGATCCCCTTTGATCTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS-3UTR CAA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGGCCCTGAGAGATCTGTaGAGAGCTGCCGGACTTCCT +
Preference number: 5 (lower is better)
Translates to: STEIHQVRPAGICHTRQRALRDL*RAAGLP
Trigger: AGGAAGTCCGGCAGCTCTCAACAGATCTCTCAGGGC...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGTCTCGGAGCCATACTaGTTCTTGACGAAGACGCCG +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCVSEPY*FLTKTP
Trigger: CGGCGTCTTCGTCAAGAACAAGTATGGCTCCGAGAC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACACCTTCGACGAGGCCTaGGATTGGGCACCGACAAGT +
Preference number: 5 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHTFDEA*DWAPTS
Trigger: ACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGT...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp ATAGCCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTGTGCTGATGGTGATCTaGTTTCCCAGATCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: IAPVHPGLLLQVQGSSRSVLMVI*FPRSKG
Trigger: CCCCTTTGATCTGGGAAACAAGATCACCATCAGCAC...AGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGGAGCCTTCCTCAGAAGCTaGTCAAAATCGTCATCCACC +
Preference number: 5 (lower is better)
Translates to: GLLLQVQGSSRSPGSHSGAFLRS*SKSSST
Trigger: GGTGGATGACGATTTTGACAAGCTTCTGAGGAAGGC...TCCTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 90 bp CTTGAGACTTCTGTCAGCCTCTGTCAGACTCCAAGACTCAAGCAGTaGCCTCTGGTCGCTGCTAAACAAGTCATGACACAGGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LETSVSLCQTPRLKQ*PLVAAKQVMTQAGA
Trigger: GGCCCCAGCCTGTGTCATGACTTGTTTAGCAGCGACCAGAGGGCACTGCTTGAGTCTTGGAGTCTGACAGAGGCTGACAGAAGTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp AGGCCAGAACCACATAGGCCTCTCGGATCTCGCTGGCATGGACATTaGTTGGCGGTGAGGGGATGGTCACAGTATCTTCAAAAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: RPEPHRPLGSRWHGH*LAVRGWSQYLQKRL
Trigger: CAGACGCTTTTGAAGATACTGTGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGGCCTATGTGGTTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS-3UTR CAA 90 bp CGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGGAAGCCACTCAGCTGGACTCTGAATTCTaGCTAATGGTTTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: RVSYSRSRVHPALLEATQLDSEF*LMVFPL
Trigger: CAGAGGGAAAACCATTAGCAAGAATTCAGAGTCCAG...CTGAGTGGCTTCCAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTCCACTCTCCAGACGTTaGTCTTTGTGGAACCAGGTG +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLPLSRR*SLWNQV
Trigger: CACCTGGTTCCACAAAGACAAACGTCTGGAGAGTGG...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCCTCGCACAGTGTAAGTaGCTGAGTCCTCAATGGCGC +
Preference number: 5 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFLAQCK*LSPQWR
Trigger: GCGCCATTGAGGACTCAGCAACTTACACTGTGCGAG...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCTGGCATGGACATTGGTaGGCGGTGAGGGGATGGTCA +
Preference number: 5 (lower is better)
Translates to: CKQNLLISCLCVPSSILSWHGHW*AVRGWS
Trigger: TGACCATCCCCTCACCGCCAACCAATGTCCATGCCA...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCTCGCTGGCATGGACATaGGTTGGCGGTGAGGGGATG +
Preference number: 5 (lower is better)
Translates to: GAMYQFMAGLMALGTFDISLAWT*VGGEGM
Trigger: CATCCCCTCACCGCCAACCAATGTCCATGCCAGCGA...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGGCCTGGCTGGGGCATaGTCCACTCTTTGCACTCAA +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIGLAGA*STLCTQ
Trigger: TTGAGTGCAAAGAGTGGACAATGCCCCAGCCAGGCC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp CGTGTGGCTTGCGGAGATGTCTTCATCGGCATCAGTGACTATGACTaGGTAGGTGCCCAAATCCTCGAGGCCGGGTTCTTTCAGGATGAC +
Preference number: 5 (lower is better)
Translates to: RVACGDVFIGISDYD*VGAQILEAGFFQDD
Trigger: GTCATCCTGAAAGAACCCGGCCTCGAGGATTTGGGCACCTACTCAGTCATAGTCACTGATGCCGATGAAGACATCTCCGCAAGCCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp CTGAGTCTTTGGGGTCCAGGATGTGAAGCCAGATCTCATCCAGGGTaGTGCCCGTCCTTATCCGATCACCACTCTCCAGACGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: LSLWGPGCEARSHPG*CPSLSDHHSPDVCL
Trigger: AAGACAAACGTCTGGAGAGTGGTGATCGGATAAGGACGGGCACCACCCTGGATGAGATCTGGCTTCACATCCTGGACCCCAAAGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGATCCTGGGTTCTATCTaGTCCCCTTTCCTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRILGSI*SPFLLP
Trigger: GGGCAGAAGGAAAGGGGACAAGATAGAACCCAGGAT...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCCGGTTAGCGTGTGGCTaGCGGAGATGTCTTCATCGG +
Preference number: 5 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIRLACG*RRCLHR
Trigger: CCGATGAAGACATCTCCGCAAGCCACACGCTAACCG...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCGTCTCCTTCTTGGTGTaGGTCACCTTGCACGTCAGC +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIVSFLV*VTLHVS
Trigger: GCTGACGTGCAAGGTGACCAACACCAAGAAGGAGAC...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp TCCAGAGTGTATTTGCCCTTGTCTGAGTCTTTGGGGTCCAGGATGTaGAGCCAGATCTCATCCAGGGTGGTGCCCGTCCTTATCCGATCA +
Preference number: 5 (lower is better)
Translates to: SRVYLPLSESLGSRM*SQISSRVVPVLIRS
Trigger: TGATCGGATAAGGACGGGCACCACCCTGGATGAGATCTGGCTTCACATCCTGGACCCCAAAGACTCAGACAAGGGCAAATACACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp AAGTCCCGTTCCCGTCTCTGGGTCATACTGACCATCTGGCATCTCTaGCCTCTGGAAGAACCACTGAAAGCGAGTCTCCTTCTTGGTGTT +
Preference number: 5 (lower is better)
Translates to: KSRSRLWVILTIWHL*PLEEPLKASLLLGV
Trigger: AACACCAAGAAGGAGACTCGCTTTCAGTGGTTCTTCCAGAGGGCAGAGATGCCAGATGGTCAGTATGACCCAGAGACGGGAACGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp AGTCTTTGGGGTCCAGGATGTGAAGCCAGATCTCATCCAGGGTGGTaGCCGTCCTTATCCGATCACCACTCTCCAGACGTTTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SLWGPGCEARSHPGW*PSLSDHHSPDVCLC
Trigger: ACAAAGACAAACGTCTGGAGAGTGGTGATCGGATAAGGACGGGCACCACCCTGGATGAGATCTGGCTTCACATCCTGGACCCCAAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp GGACCTCGTGGGAGGAGATTGGATCATGGGGGCGGATGTCCGCTTTaGTGTTGTCAAGATAGGGAGCAAGTTCTCATGAGATCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GPRGRRLDHGGGCPL*CCQDREQVLMRSAC
Trigger: ACAAGCAGATCTCATGAGAACTTGCTCCCTATCTTGACAACAGCAAAGCGGACATCCGCCCCCATGATCCAATCTCCTCCCACGAGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp AATGCAGAGAAGTCCCGTTCCCGTCTCTGGGTCATACTGACCATCTaGCATCTCTGCCCTCTGGAAGAACCACTGAAAGCGAGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: NAEKSRSRLWVILTI*HLCPLEEPLKASLL
Trigger: AAGGAGACTCGCTTTCAGTGGTTCTTCCAGAGGGCAGAGATGCCAGATGGTCAGTATGACCCAGAGACGGGAACGGGACTTCTCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp AGATGTCCCCACCTTCCGGGAGTAGATGTAATAACCCAGGAGCTCTaGGTCTTTCACAGGATCCCATGTCAGGGAGACAGAGGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RCPHLPGVDVITQEL*VFHRIPCQGDRGLC
Trigger: ACACAGACCTCTGTCTCCCTGACATGGGATCCTGTGAAAGACCCAGAGCTCCTGGGTTATTACATCTACTCCCGGAAGGTGGGGACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS-3UTR CAA 90 bp CCCCAGTGCATCCGGGTCTCCTACTCCAGGTCCAGGGTTCATCCCGCTCTCCTGCTTACTCTATTTTTCTaGGAAATGTCCATGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PQCIRVSYSRSRVHPALLLTLFF*EMSMCF
Trigger: GAAGCACATGGACATTTCCAAGAAAAATAGAGTAAG...CAGGAGAGCGGGATGAACCCTGGACCTGGAGTAGGAGACCCGGATGCACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTCCAGACGTTTGTCTTaGTGGAACCAGGTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLSRRLS*WNQVVF
Trigger: GAAAACCACCTGGTTCCACAAAGACAAACGTCTGGA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACAGAGTGTATTTGCCCTaGTCTGAGTCTTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNRVYLP*SESLGS
Trigger: GGACCCCAAAGACTCAGACAAGGGCAAATACACTCT...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTCTGGTGTTCAGCCATaGCATCCTCAAAAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQSGVQP*HPQKLA
Trigger: GGCAAGCTTTTGAGGATGCAATGGCTGAACACCAGA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACCCGCTGTCTTCACTGTaGACCTTCTCAATGGTGATG +
Preference number: 5 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHPLSSL*TFSMVM
Trigger: CATCACCATTGAGAAGGTCAACAGTGAAGACAGCGG...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACCCGCTGTCTTCACTGTaGACCTTCTCAATGGTGATG +
Preference number: 5 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHPLSSL*TFSMVM
Trigger: CATCACCATTGAGAAGGTCAACAGTGAAGACAGCGG...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCATCCTGGGTTCTATCTaGTCCCCTTTCCTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIILGSI*SPFLLP
Trigger: GGGCAGAAGGAAAGGGGACAAGATAGAACCCAGGAT...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACTGGACTGAGGCCTCTTaGCAAGCAGAACCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNWTEAS*QAEPAY
Trigger: ATAAGCAGGTTCTGCTTGCAAAGAGGCCTCAGTCCA...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACTGGACTGAGGCCTCTTaGCAAGCAGAACCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHWTEAS*QAEPAY
Trigger: ATAAGCAGGTTCTGCTTGCAAAGAGGCCTCAGTCCA...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACTGTGTCTCTGAAAGCTaGAACTTGAGCTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNCVSES*NLSWRR
Trigger: CCTCCTCCAGCTCAAGTTCAAGCTTTCAGAGACACA...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp TGCAAGCAGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCACTTTATCCTCGATCTaGACCCTCTGGGGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: CKQNLLISCLCVPSSILSTLSSI*TLWGSS
Trigger: ACTGGACCCCCAGAGGGTCAAGATCGAGGATAAAGT...GCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCTGCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCAGCCGGAGATCAGTTaGATCACTGGGTTTCTGATC +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNQPEIS*ITGFLI
Trigger: GATCAGAAACCCAGTGATCAAACTGATCTCCGGCTG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp GGTGGCTCTAAACAGTTCTGTTCAAGGTGGGTCTGCACTGGAAAATaGTCTCGATGGCTGAGGCAGGGGAACTTGAGACTTCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GGSKQFCSRWVCTGK*SRWLRQGNLRLLSA
Trigger: GGCTGACAGAAGTCTCAAGTTCCCCTGCCTCAGCCATCGAGATCATTTTCCAGTGCAGACCCACCTTGAACAGAACTGTTTAGAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 90 bp AGAGCTGCCGGACTTCCTTCCCTGCAGCTATTTCCAGAGTGTATTTaGCCTTGTCTGAGTCTTTGGGGTCCAGGATGTGAAGCCAGATCT +
Preference number: 5 (lower is better)
Translates to: RAAGLPSLQLFPECI*PCLSLWGPGCEARS
Trigger: AGATCTGGCTTCACATCCTGGACCCCAAAGACTCAGACAAGGGCAAATACACTCTGGAAATAGCTGCAGGGAAGGAAGTCCGGCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp GCCATTGCATCCTCAAAAGCTTGCCCTGAGAGATCTGTTGAGAGCTaGCGGACTTCCTTCCCTGCAGCTATTTCCAGAGTGTATTTGCCC +
Preference number: 5 (lower is better)
Translates to: AIASSKACPERSVES*RTSFPAAISRVYLP
Trigger: GGGCAAATACACTCTGGAAATAGCTGCAGGGAAGGAAGTCCGGCAGCTCTCAACAGATCTCTCAGGGCAAGCTTTTGAGGATGCAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp TGCTGGGCTTCATTATCATTATGGCCCCCTTTCAAGGATGCCTGGTaGAGGAAGAGGGGTGATCTGGTTTGGCTCTGTACTCCCACTCAA +
Preference number: 5 (lower is better)
Translates to: CWASLSLWPPFKDAW*RKRGDLVWLCTPTQ
Trigger: TTGAGTGGGAGTACAGAGCCAAACCAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS-3UTR CAA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACTGGAATCAGATAGACTaGTTCAAACCTGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHWNQID*FKPGLS
Trigger: GGAGAGCCCAGGTTTGAACAAGTCTATCTGATTCCA...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTCTGGTGTTCAGCCATaGCATCCTCAAAAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIISGVQP*HPQKLA
Trigger: GGCAAGCTTTTGAGGATGCAATGGCTGAACACCAGA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTTATCATGTCCTGCCTaGTCCTGGAGTTGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIILSCPA*SWSCLR
Trigger: GCGCAAACAACTCCAGGACAAGGCAGGACATGATAA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCTGGCGGCACTTTCCTaGGACCTGCTTTATAATCTT +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNLAALS*DLLYNL
Trigger: AAGATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCCTTGGATGGGTTTGTaGTTAACTGTTTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCPWMGL*LTVCHS
Trigger: TGAGTGGCAAACAGTTAACAACAAACCCATCCAAGG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGTAAACCTGGTGCCTaGGATGGGTTTGTTGTTAAC +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLCKPGA*DGFVVN
Trigger: GTTAACAACAAACCCATCCAAGGCACCAGGTTTACA...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCCGGTCAAAATTGATTTaGCGGTTCGGCGAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCARSKLI*RFGELK
Trigger: CTTCAGCTCGCCGAACCGCAAAATCAATTTTGACCG...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp AGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGAGGTTCTCTCGGTCAAAATaGATTTTGCGGTTCGGCGAG +
Preference number: 5 (lower is better)
Translates to: STEIHQVRPAGICHTRQRFSRSK*ILRFGE
Trigger: CTCGCCGAACCGCAAAATCAATTTTGACCGAGAGAA...CCTCTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGTTTTCCATCTTGGAGTaGAGCGGTGTACGACCCTTT +
Preference number: 5 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQFSILE*SGVRPF
Trigger: AAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAA...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CAGCTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGTTTGGCTTTTCCATCTaGGAGTTGAGCGGTGTACGA +
Preference number: 5 (lower is better)
Translates to: QLSTEIHQVRPAGICHTRFGFSI*ELSGVR
Trigger: TCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAA...CCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp GACTTCCTTCCCTGCAGCTATTTCCAGAGTGTATTTGCCCTTGTCTaGGTCTTTGGGGTCCAGGATGTGAAGCCAGATCTCATCCAGGGT +
Preference number: 5 (lower is better)
Translates to: DFLPCSYFQSVFALV*VFGVQDVKPDLIQG
Trigger: ACCCTGGATGAGATCTGGCTTCACATCCTGGACCCCAAAGACTCAGACAAGGGCAAATACACTCTGGAAATAGCTGCAGGGAAGGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp AAATGCTGGGCTTCATTATCATTATGGCCCCCTTTCAAGGATGCCTaGTGCAGGAAGAGGGGTGATCTGGTTTGGCTCTGTACTCCCACT +
Preference number: 5 (lower is better)
Translates to: KCWASLSLWPPFKDA*CRKRGDLVWLCTPT
Trigger: AGTGGGAGTACAGAGCCAAACCAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS-3UTR CAA 90 bp GTCCTGGAGTTGTTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTATTCCCTTGTCCTTTTaGGACAACTCTTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: VLELFAPRSVSPTGLRPLIPLSF*DNSSMQ
Trigger: CTGCATTGAAGAGTTGTCCAAAAAGGACAAGGGAAT...AAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAACAACTCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCACCCCAGAAAGATCTTaGCTTCTCCACTTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIITPERS*LLHFGA
Trigger: TGCACCAAAGTGGAGAAGCAAAGATCTTTCTGGGGT...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCCTGGCGGCACTTTCCTaGGACCTGCTTTATAATCTT +
Preference number: 5 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCALAALS*DLLYNL
Trigger: AAGATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAG...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp AGAACCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACTTTGTTGTTAACTGTTaGCCACTCAGATGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RTCLSAAFVFPAPSSASHFVVNC*PLRCPH
Trigger: GTGGGGACATCTGAGTGGCAAACAGTTAACAACAAA...GTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp ACCCTGGTACAGGTTGTCCCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCGTGCCTTGGATGGGTTaGTTGTTAACTGTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: TLVQVVPTGPCRLDSDCAVPWMG*LLTVCH
Trigger: GTGGCAAACAGTTAACAACAAACCCATCCAAGGCAC...GGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGGGACAACCTGTACCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCAGGATGACCTTGGACTaGTTAACTTTATCCTCGATC +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCRMTLD*LTLSSI
Trigger: GATCGAGGATAAAGTTAACAAGTCCAAGGTCATCCT...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp AGGCTGGTCATTCTTCAGCCAAGAGATTTCAGGGGTGGGGTCTCCTaGGACGATGCAAGTCAAGCACAGGGTCTTATCTTCCATGATAGT +
Preference number: 5 (lower is better)
Translates to: RLVILQPRDFRGGVS*DDASQAQGLIFHDS
Trigger: ACTATCATGGAAGATAAGACCCTGTGCTTGACTTGCATCGTCTCAGGAGACCCCACCCCTGAAATCTCTTGGCTGAAGAATGACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp TGGCGCAGGGTAAATATTGTGAAATGCTGGGCTTCATTATCATTATaGCCCCCTTTCAAGGATGCCTGGTGCAGGAAGAGGGGTGATCTG +
Preference number: 5 (lower is better)
Translates to: WRRVNIVKCWASLSL*PPFKDAWCRKRGDL
Trigger: CAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCATTTCACAATATTTACCCTGCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS-3UTR CAA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGATTCCCTTGTCCTTTTaGGACAACTCTTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQIPLSF*DNSSMQ
Trigger: CTGCATTGAAGAGTTGTCCAAAAAGGACAAGGGAAT...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGGTCCTTGTTCTCTTCTaGCCCTCGGCTCAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELVLVLF*PSAQRA
Trigger: TGCCCGCTGAGCCGAGGGCAAGAAGAGAACAAGGAC...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTGCGCCCAGGTCTGTTTCTCCCACTGGACTGAGGCCTCTTTGCAAGCAGAACCCAAACGTCGATCTTTaGAAGATCTCTGAATCGAAG +
Preference number: 5 (lower is better)
Translates to: FAPRSVSPTGLRPLCKQNPNVDL*KISESK
Trigger: CTTCGATTCAGAGATCTTCAAAAGATCGACGTTTGG...GTTCTGCTTGCAAAGAGGCCTCAGTCCAGTGGGAGAAACAGACCTGGGCGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCCTGAAGATCTCCTTGTaGTTGAAGATTAGATGTAGC +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCLKISL*LKIRCS
Trigger: GCTACATCTAATCTTCAACAACAAGGAGATCTTCAG...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp ATCATTATGGCCCCCTTTCAAGGATGCCTGGTGCAGGAAGAGGGGTaGTCTGGTTTGGCTCTGTACTCCCACTCAAATCTCATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: IIMAPFQGCLVQEEG*SGLALYSHSNLMLN
Trigger: ATTCAACATGAGATTTGAGTGGGAGTACAGAGCCAAACCAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS TCA 90 bp GCGGATGTCCGCTTTGCTGTTGTCAAGATAGGGAGCAAGTTCTCATaGGATCTGCTTGTTTGGAAGTGTGTAGCACTTCCTGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: ADVRFAVVKIGSKFS*DLLVWKCVALPALL
Trigger: GAGCAAAGCAGGAAGTGCTACACACTTCCAAACAAGCAGATCTCATGAGAACTTGCTCCCTATCTTGACAACAGCAAAGCGGACATCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 90 bp TGGGCAGCCTTAGCCTCCTCCTTCCCTTTCCTCACATATGAAAAATaGCAGAACAGTACCTGGCGCAGGGTAAATATTGTGAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: WAALASSFPFLTYEK*QNSTWRRVNIVKCW
Trigger: CCAGCATTTCACAATATTTACCCTGCGCCAGGTACTGTTCTGGCATTTTTCATATGTGAGGAAAGGGAAGGAGGAGGCTAAGGCTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448831.1
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCATTTCCAGAGTGTATTaGCCCTTGTCTGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIIISRVY*PLSESL
Trigger: CAAAGACTCAGACAAGGGCAAATACACTCTGGAAAT...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CCTGCTTATCAGCTGCCTTTGTGTTCCCAGCTCCATCCTCAGCCTCCCACATGCGACTTCAGGTGTCTGTaGAACTTACATGAATTGAAA +
Preference number: 5 (lower is better)
Translates to: PAYQLPLCSQLHPQPPTCDFRCL*NLHELK
Trigger: TTTCAATTCATGTAAGTTCAACAGACACCTGAAGTC...GCATGTGGGAGGCTGAGGATGGAGCTGGGAACACAAAGGCAGCTGATAAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CTCAGTACTGAGATCCATCAAGTGAGGCCAGCCGGTATCTGTCACACCAGGCAGGAGCTGAAGATCTCCTaGTTGTTGAAGATTAGATGT +
Preference number: 5 (lower is better)
Translates to: LSTEIHQVRPAGICHTRQELKIS*LLKIRC
Trigger: ACATCTAATCTTCAACAACAAGGAGATCTTCAGCTC...CTGCCTGGTGTGACAGATACCGGCTGGCCTCACTTGATGGATCTCAGTACTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 90 bp ACCAGTGTCAAGGTAATCTGGTTTTTGGCTTTTCCATCTTGGAGTTaGGCGGTGTACGACCCTTTGTCCTCCTCAGACAAGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: TSVKVIWFLAFPSWS*AVYDPLSSSDKFWM
Trigger: CATCCAGAACTTGTCTGAGGAGGACAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTTGACACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 90 bp ACTTTGGCACGATTCTTCTCGATGATGGCCAAGGTTTTCAGTCTCTaGTGTTCAGCCATTGCATCCTCAAAAGCTTGCCCTGAGAGATCT +
Preference number: 5 (lower is better)
Translates to: TLARFFSMMAKVFSL*CSAIASSKACPERS
Trigger: AGATCTCTCAGGGCAAGCTTTTGAGGATGCAATGGCTGAACACCAGAGACTGAAAACCTTGGCCATCATCGAGAAGAATCGTGCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 90 bp AAATGCCAGAACAGTACCTGGCGCAGGGTAAATATTGTGAAATGCTaGGCTTCATTATCATTATGGCCCCCTTTCAAGGATGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: KCQNSTWRRVNIVKC*ASLSLWPPFKDAWC
Trigger: GCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCATTTCACAATATTTACCCTGCGCCAGGTACTGTTCTGGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS-3UTR CAA 90 bp GGTGCGATGTATCAGTTTATGGCAGGGCTCATGGCCCTTGGCACTTTTGACATCATTTCCAGAGTGTATTaGCCCTTGTCTGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GAMYQFMAGLMALGTFDIISRVY*PLSESL
Trigger: CAAAGACTCAGACAAGGGCAAATACACTCTGGAAAT...GATGTCAAAAGTGCCAAGGGCCATGAGCCCTGCCATAAACTGATACATCGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp GGTTCATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCGACTTCAGGTGTCTGTaGAACTTACATGAATTGAAA +
Preference number: 5 (lower is better)
Translates to: GSSRSPGSHSGPQKDLCFDFRCL*NLHELK
Trigger: TTTCAATTCATGTAAGTTCAACAGACACCTGAAGTC...GAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGATGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTCTGAAAGCTTGAACTaGAGCTGGAGGAGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLESESLN*SWRREG
Trigger: ACCCTCCCTCCTCCAGCTCAAGTTCAAGCTTTCAGA...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTCTCCCTCCTTGGACCACTGGCGGCACTTTCCTTGGACCTGCTTTATAATCTCTTTCAGGATGACCTaGGACTTGTTAACTTTATCC +
Preference number: 5 (lower is better)
Translates to: LSPSLDHWRHFPWTCFIISFRMT*DLLTLS
Trigger: GGATAAAGTTAACAAGTCCAAGGTCATCCTGAAAGA...GATTATAAAGCAGGTCCAAGGAAAGTGCCGCCAGTGGTCCAAGGAGGGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp ATCCCGCTCTCCTGGAAGCCACTCAGGACCCCAGAAAGATCTTTGCTTCTCCACAAGATCTCCTTGTTGTaGAAGATTAGATGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: IPLSWKPLRTPERSLLLHKISLL*KIRCSS
Trigger: TGAGCTACATCTAATCTTCAACAACAAGGAGATCTT...GTGGAGAAGCAAAGATCTTTCTGGGGTCCTGAGTGGCTTCCAGGAGAGCGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGAAGCGAGTCTCCTTCTaGGTGTTGGTCACCTTGCAC +
Preference number: 5 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEKRVSF*VLVTLH
Trigger: GTGCAAGGTGACCAACACCAAGAAGGAGACTCGCTT...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGAAGCGAGTCTCCTTCTaGGTGTTGGTCACCATGTGT +
Preference number: 5 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEKRVSF*VLVTMC
Trigger: ACACATGGTGACCAACACCAAGAAGGAGACTCGCTT...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS-3UTR CAA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTTGCCTTGTCCTGGAGTaGTTTGCGCCCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCCLVLE*FAPRSV
Trigger: AACAGACCTGGGCGCAAACAACTCCAGGACAAGGCA...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGATCCGTGTGTCATTTTaGTACCAGGTGACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLEIRVSF*YQVTWG
Trigger: ACCCCAGGTCACCTGGTACAAAAATGACACACGGAT...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS-3UTR CAA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTGCGGTGTACGACCCTTaGTCCTCCTCAGACAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCAVYDP*SSSDKF
Trigger: GAACTTGTCTGAGGAGGACAAAGGGTCGTACACCGC...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 90 bp ACTTTGGGCTTTGTCCTTGAAAAAGAACATGTGGCTGTTAATACCTaGACTAATGCTGGGATGCAAAAACACCGAGTCCTTTCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: TLGFVLEKEHVAVNT*TNAGMQKHRVLSEP
Trigger: GGGCTCTGAAAGGACTCGGTGTTTTTGCATCCCAGCATTAGTGCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS-3UTR CAA 90 bp CACTTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTCCAGACGTTTGTCTTaGTGGAACCAGGTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: HFPWTCFIIFIMSCLVLESRRLS*WNQVVF
Trigger: GAAAACCACCTGGTTCCACAAAGACAAACGTCTGGA...CTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS-3UTR CAA 90 bp TTTCCTTGGACCTGCTTTATAATCTTTATCATGTCCTGCCTTGTCCTGGAGTTGTTATCATGTCCTGCCTaGTCCTGGAGTTGTTTGCGC +
Preference number: 5 (lower is better)
Translates to: FPWTCFIIFIMSCLVLELLSCPA*SWSCLR
Trigger: GCGCAAACAACTCCAGGACAAGGCAGGACATGATAA...CAACTCCAGGACAAGGCAGGACATGATAAAGATTATAAAGCAGGTCCAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp TTTCAGAGCCCTCAAAGAGAATTGTCATCCAGAGACACGCAAGGATaGTCTAGCTTAGAGAAAAATGTCCTTCTCATCCTGTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: FQSPQRELSSRDTQG*SSLEKNVLLILSLL
Trigger: AAGAAGGGACAGGATGAGAAGGACATTTTTCTCTAAGCTAGAGCATCCTTGCGTGTCTCTGGATGACAATTCTCTTTGAGGGCTCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS-3UTR CAA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTAGACCTCTCACCACTTaGGCACGATTCTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCRPLTT*ARFFSM
Trigger: CATCGAGAAGAATCGTGCCAAAGTGGTGAGAGGTCT...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 90 bp CATTTAGGCTTGCAGGTAGAACTAGATGACCTCACATATGAAAAATaGCAGAACAGTACCTGGCGCAGGGTAAATATTGTGAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: HLGLQVELDDLTYEK*QNSTWRRVNIVKCW
Trigger: CCAGCATTTCACAATATTTACCCTGCGCCAGGTACTGTTCTGGCATTTTTCATATGTGAGGTCATCTAGTTCTACCTGCAAGCCTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp TGGTTTTCCCTCTGCCTCTTGATCCCTGCCTTACTCTATTTTTCTTaGAAATGTCCATGTGCTTCAGTTAAATGTCATCTCCTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: WFSLCLLIPALLYFS*KCPCASVKCHLLQE
Trigger: TTCCTGGAGGAGATGACATTTAACTGAAGCACATGGACATTTCCAAGAAAAATAGAGTAAGGCAGGGATCAAGAGGCAGAGGGAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS CCA 90 bp AAAAATGTCCTTCTCATCCTGTCCCTTCTTGATAAGACCCAATTGTaGACCTCTTTCTCTCTCTTCACCTATCAACGTTCTCCTAGAGCA +
Preference number: 5 (lower is better)
Translates to: KNVLLILSLLDKTQL*TSFSLFTYQRSPRA
Trigger: TGCTCTAGGAGAACGTTGATAGGTGAAGAGAGAGAAAGAGGTCCACAATTGGGTCTTATCAAGAAGGGACAGGATGAGAAGGACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp GGTACATCTTCAAGACTTTGGGCTTTGTCCTTGAAAAAGAACATGTaGCTGTTAATACCTGCACTAATGCTGGGATGCAAAAACACCGAG +
Preference number: 5 (lower is better)
Translates to: GTSSRLWALSLKKNM*LLIPALMLGCKNTE
Trigger: CTCGGTGTTTTTGCATCCCAGCATTAGTGCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGTCTTGAAGATGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 90 bp CTAGAACAACTTTGTGGAATAAGTGGTCACCAGCGTGGTAGAATTTaGAGGTTCAGGTCAATTCTTCCTAAAAATATTGCCCTTGATCCC +
Preference number: 5 (lower is better)
Translates to: LEQLCGISGHQRGRI*RFRSILPKNIALDP
Trigger: GGGATCAAGGGCAATATTTTTAGGAAGAATTGACCTGAACCTTCAAATTCTACCACGCTGGTGACCACTTATTCCACAAAGTTGTTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 90 bp GTAGAACTAGATGACCTCACATATGAAAAATGCCAGAACAGTACCTaGCGCAGGGTAAATATTGTGAAATGCTGGGCTTCATTATCATTA +
Preference number: 5 (lower is better)
Translates to: VELDDLTYEKCQNST*RRVNIVKCWASLSL
Trigger: TAATGATAATGAAGCCCAGCATTTCACAATATTTACCCTGCGCCAGGTACTGTTCTGGCATTTTTCATATGTGAGGTCATCTAGTTCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS-3UTR CAA 90 bp CTGTTGAACTTACATGAATTGAAACTATGGGATCCTAAAAGAGGGGTGCGATGTAAGGTAATCTGGTTTTaGGCTTTTCCATCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLNLHELKLWDPKRGVRCKVIWF*AFPSWS
Trigger: ACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTT...ACATCGCACCCCTCTTTTAGGATCCCATAGTTTCAATTCATGTAAGTTCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp TCTGTCCGCCGCCTCAGCGTCTTCCAGTCCCGCCTCTaGCGCAGCAGCCGGTGGGTCTGCAGGAAGGCGATC +
Preference number: 6 (lower is better)
Translates to: SVRRLSVFQSRL*RSSRWVCRKAI
Trigger: GATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCAGAGGCGGGACTGGAAGACGCTGAGGCGGCGGACAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp CAGGTCAGCAGGACCGTGGTGTGCTCCCAGACGGCGTaGGAGCGAAGAGGGATCCAGAACCAGGGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: QVSRTVVCSQTA*ERRGIQNQGPR
Trigger: CCGCGGGCCCTGGTTCTGGATCCCTCTTCGCTCCCACGCCGTCTGGGAGCACACCACGGTCCTGCTGACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 72 bp AGACAGCTCGGAGGAGGCCGTCAGAGCCAGGGCTGCTaGCAGGGCGTAGTCCGCGGCGCTGAACTCATGCTC +
Preference number: 6 (lower is better)
Translates to: RQLGGGRQSQGC*QGVVRGAELML
Trigger: GAGCATGAGTTCAGCGCCGCGGACTACGCCCTGGCAGCAGCCCTGGCTCTGACGGCCTCCTCCGAGCTGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp GAGCCAGGGCTGCTGCCAGGGCGTAGTCCGCGGCGCTaGACTCATGCTCTTCTTCGCTGCTGCGGAAGGTCC +
Preference number: 6 (lower is better)
Translates to: EPGLLPGRSPRR*THALLRCCGRS
Trigger: GGACCTTCCGCAGCAGCGAAGAAGAGCATGAGTTCAGCGCCGCGGACTACGCCCTGGCAGCAGCCCTGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 72 bp GGTTCTCGGCCTCGGCATCTCTCACAAGCACGTAGGTaGTCTGTTCCCGGGGTCCGAAGGGCGAGGGCACCC +
Preference number: 6 (lower is better)
Translates to: GSRPRHLSQARR*SVPGVRRARAP
Trigger: GGGTGCCCTCGCCCTTCGGACCCCGGGAACAGAGCACCTACGTGCTTGTGAGAGATGCCGAGGCCGAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 72 bp TGCAGGCTGGACCTGCCCTTGGACTCACCCAGAGCCTaGTTGACCCTGATGGGCTCGGTGGCGGCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: CRLDLPLDSPRA*LTLMGSVAAEL
Trigger: GAGCTCAGCCGCCACCGAGCCCATCAGGGTCAAGCAGGCTCTGGGTGAGTCCAAGGGCAGGTCCAGCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp AGCGTCTTCCAGTCCCGCCTCTGGCGCAGCAGCCGGTaGGTCTGCAGGAAGGCGATCTCAGTCCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SVFQSRLWRSSR*VCRKAISVLSQ
Trigger: CTGGGAGAGGACTGAGATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCAGAGGCGGGACTGGAAGACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp GTGGTGAGGCCTGGACAGTGCAGGTCAGCAGGACCGTaGTGTGCTCCCAGACGGCGTGGGAGCGAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: VVRPGQCRSAGP*CAPRRRGSEEG
Trigger: TCCCTCTTCGCTCCCACGCCGTCTGGGAGCACACCACGGTCCTGCTGACCTGCACTGTCCAGGCCTCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp TGGATTGGGCACCGACAAGTCCCTCCGGGGGCCTCATaGCAGGCGATCCATTCCCCAGACTCGCCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: WIGHRQVPPGAS*QAIHSPDSPWH
Trigger: GTGCCAGGGCGAGTCTGGGGAATGGATCGCCTGCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp CCAGGGAGTACGTCAGTGGTGCTCTGTCCCGGGGGCTaGGCTCCTCCCAGGCCAGAACCACATAGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PGSTSVVLCPGG*APPRPEPHRPL
Trigger: GAGAGGCCTATGTGGTTCTGGCCTGGGAGGAGCCCAGCCCCCGGGACAGAGCACCACTGACGTACTCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 72 bp AGGCTGGACCTGCCCTTGGACTCACCCAGAGCCTGCTaGACCCTGATGGGCTCGGTGGCGGCTGAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: RLDLPLDSPRAC*TLMGSVAAELS
Trigger: CGAGAGCTCAGCCGCCACCGAGCCCATCAGGGTCAAGCAGGCTCTGGGTGAGTCCAAGGGCAGGTCCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp AGCCGGTGGGTCTGCAGGAAGGCGATCTCAGTCCTCTCCCAGTCATaGCCGAAGCCCACCCGCTTCTGCCCTCGCTCCTCCAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: SRWVCRKAISVLSQS*PKPTRFCPRSSSST
Trigger: CGTGGAGCTGGAGGAGCGAGGGCAGAAGCGGGTGGGCTTCGGCAATGACTGGGAGAGGACTGAGATCGCCTTCCTGCAGACCCACCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 90 bp GAGGTTTGCAGGCTGGACCTGCCCTTGGACTCACCCAGAGCCTGCTaGACCCTGATGGGCTCGGTGGCGGCTGAGCTCTCGCCTACCCCA +
Preference number: 6 (lower is better)
Translates to: EVCRLDLPLDSPRAC*TLMGSVAAELSPTP
Trigger: TGGGGTAGGCGAGAGCTCAGCCGCCACCGAGCCCATCAGGGTCAAGCAGGCTCTGGGTGAGTCCAAGGGCAGGTCCAGCCTGCAAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp GAGCCAGGGCTGCTGCCAGGGCGTAGTCCGCGGCGCTaGACTCATGCTCTTCTTCGCTGCTCCCAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: EPGLLPGRSPRR*THALLRCSQKE
Trigger: CTCCTTCTGGGAGCAGCGAAGAAGAGCATGAGTTCAGCGCCGCGGACTACGCCCTGGCAGCAGCCCTGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp GTCGGAAACCCTCAGGTGGGTGCCAGAGATGGGGCCTaGGGTGACCGGCTTCCACTGCTCAGAGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VGNPQVGARDGA*GDRLPLLRAFL
Trigger: GAGGAAGGCTCTGAGCAGTGGAAGCCGGTCACCCCAGGCCCCATCTCTGGCACCCACCTGAGGGTTTCCGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp CACCCGGAACCGATAGCTCTGACCTTCGACGAGGCCTaGGATTGGGCACCGACAAGTCCCTCCGGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: HPEPIALTFDEA*DWAPTSPSGGL
Trigger: GAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGTCAGAGCTATCGGTTCCGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 90 bp CTCTCACCCGGAACCGATAGCTCTGACCTTCGACGAGGCCTTGGATaGGGCACCGACAAGTCCCTCCGGGGGCCTCATGGCAGGCGATCC +
Preference number: 6 (lower is better)
Translates to: LSPGTDSSDLRRGLG*GTDKSLRGPHGRRS
Trigger: GGATCGCCTGCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGTCAGAGCTATCGGTTCCGGGTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 90 bp GATGGCTCTCACCCGGAACCGATAGCTCTGACCTTCGACGAGGCCTaGGATTGGGCACCGACAAGTCCCTCCGGGGGCCTCATGGCAGGC +
Preference number: 6 (lower is better)
Translates to: DGSHPEPIALTFDEA*DWAPTSPSGGLMAG
Trigger: GCCTGCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGTCAGAGCTATCGGTTCCGGGTGAGAGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp TGCCCCGGGTGTCACTGGGCGGGGCCCAAGTCAGGATaGGGCAGTCTCTGTTCACATCCAGGCATCGGACGT +
Preference number: 6 (lower is better)
Translates to: CPGCHWAGPKSG*GSLCSHPGIGR
Trigger: ACGTCCGATGCCTGGATGTGAACAGAGACTGCCTCATCCTGACTTGGGCCCCGCCCAGTGACACCCGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 72 bp TTCCAGTCCCGCCTCTGGCGCAGCAGCCGGTGGGTCTaGAGGAAGGCGATCTCAGTCCTCTCCCAGTCATTG +
Preference number: 6 (lower is better)
Translates to: FQSRLWRSSRWV*RKAISVLSQSL
Trigger: CAATGACTGGGAGAGGACTGAGATCGCCTTCCTGCAGACCCACCGGCTGCTGCGCCAGAGGCGGGACTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 72 bp CCAGGGCCAGCTCCAGTTTCCCTCAGAGGGCGTATGTaGCACTGGCCACCAGGACTGGGCCCTCCAAGATGT +
Preference number: 6 (lower is better)
Translates to: PGPAPVSLRGRM*HWPPGLGPPRC
Trigger: ACATCTTGGAGGGCCCAGTCCTGGTGGCCAGTGGCACATACGCCCTCTGAGGGAAACTGGAGCTGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp TGCTGGGTGCCGACAGCTCGCCAACACCTGCCCAGTTaGCAGCCCGGGCACGGAACTCATAGAAGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: CWVPTARQHLPS*QPGHGTHRSGL
Trigger: AAGGCCACTTCTATGAGTTCCGTGCCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp GTGATAGCCTGTGACAGGCCCAGCCCCCATATACAGTaGGGGTTCCCACTGCAGCACCAGGGATGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: VIACDRPSPHIQ*GFPLQHQGCGP
Trigger: CGGGCCACATCCCTGGTGCTGCAGTGGGAACCCCCACTGTATATGGGGGCTGGGCCTGTCACAGGCTATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp GGAACCGATAGCTCTGACCTTCGACGAGGCCTTGGATaGGGCACCGACAAGTCCCTCCGGGGGCCTCATGGC +
Preference number: 6 (lower is better)
Translates to: GTDSSDLRRGLG*GTDKSLRGPHG
Trigger: GCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGTCAGAGCTATCGGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 90 bp CTCCGGGCTGCATCATGGTCACCCATGACAACCAACTCTGAGGCCTaGGAGGGGACGCTGCTGCCTACCCTGCTGATGGCTCTCACCCGG +
Preference number: 6 (lower is better)
Translates to: LRAASWSPMTTNSEA*EGTLLPTLLMALTR
Trigger: CCGGGTGAGAGCCATCAGCAGGGTAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATGCAGCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp CCGGGCTGCATCATGGTCACCCATGACAACCAACTCTaGGGCCTTGGAGGGGACGCTGCTGCCTACCCTGCT +
Preference number: 6 (lower is better)
Translates to: PGCIMVTHDNQL*GLGGDAAAYPA
Trigger: AGCAGGGTAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATGCAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp AGCCCTACCTTGCAGACCCGGGTGGGGATGGGCTGCTaGTTGACCGCATGCCAGTCCAGCTCTTCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: SPTLQTRVGMGC*LTACQSSSSES
Trigger: TGACTCGGAAGAGCTGGACTGGCATGCGGTCAATCAGCAGCCCATCCCCACCCGGGTCTGCAAGGTAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 72 bp CCCGGACCATGTAGAGCCCCTCGTCCTCCTTGTAGGTaGAGGACACCTTCAGGGATGCCTGGCGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: PGPCRAPRPPCR*RTPSGMPGGLC
Trigger: ACACAGACCGCCAGGCATCCCTGAAGGTGTCCTGCACCTACAAGGAGGACGAGGGGCTCTACATGGTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 72 bp AAACAGGCTGCTGGGTGCCGACAGCTCGCCAACACCTaGCCAGTTGGCAGCCCGGGCACGGAACTCATAGAA +
Preference number: 6 (lower is better)
Translates to: KQAAGCRQLANT*PVGSPGTELIE
Trigger: TTCTATGAGTTCCGTGCCCGGGCTGCCAACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp CAGCATCCTTCCCCAGGTAAGTGCGGACGAGGACTTTaGCGAAGGAGGAGGCCTGGCCGTGGGCGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: QHPSPGKCGRGL*RRRRPGRGRSS
Trigger: TGAAGAACGCCCACGGCCAGGCCTCCTCCTTCGCCAAAGTCCTCGTCCGCACTTACCTGGGGAAGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp GAACCGATAGCTCTGACCTTCGACGAGGCCTTGGATTaGGCACCGACAAGTCCCTCCGGGGGCCTCATGGCA +
Preference number: 6 (lower is better)
Translates to: EPIALTFDEALD*APTSPSGGLMA
Trigger: TGCCATGAGGCCCCCGGAGGGACTTGTCGGTGCCCAATCCAAGGCCTCGTCGAAGGTCAGAGCTATCGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp GGGCACCTGGCTTGTCCTCCAGGAGCACGGGATCAGTaGGCATGGACGGTTGCCCCAGACCAGCTGAATTCA +
Preference number: 6 (lower is better)
Translates to: GHLACPPGARDQ*AWTVAPDQLNS
Trigger: TGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCGTGCTCCTGGAGGACAAGCCAGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp CCCTCAGAGGGCGTATGTGCCACTGGCCACCAGGACTaGGCCCTCCAAGATGTGATCTATGAGCCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: PSEGVCATGHQD*ALQDVIYEPQL
Trigger: GAGCTGGGGCTCATAGATCACATCTTGGAGGGCCCAGTCCTGGTGGCCAGTGGCACATACGCCCTCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp TCACTGACCTTGCAGACCCGGGTGGGGATGGGCTGCTaGTTGACCGCATGCCAGTCCAGCTCTTCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: SLTLQTRVGMGC*LTACQSSSSES
Trigger: TGACTCGGAAGAGCTGGACTGGCATGCGGTCAATCAGCAGCCCATCCCCACCCGGGTCTGCAAGGTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 72 bp CTACCTTGCAGACCCGGGTGGGGATGGGCTGCTGATTaGCCGCATGCCAGTCCAGCTCTTCCGAGTCATGCT +
Preference number: 6 (lower is better)
Translates to: LPCRPGWGWAAD*PHASPALPSHA
Trigger: AGCATGACTCGGAAGAGCTGGACTGGCATGCGGTCAATCAGCAGCCCATCCCCACCCGGGTCTGCAAGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 72 bp GCTGGGGCATTGTCCACTCTTTGCACTCAAACAGGCTaGTGGGTGCCGACAGCTCGCCAACACCTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: AGALSTLCTQTG*WVPTARQHLPS
Trigger: ACTGGGCAGGTGTTGGCGAGCTGTCGGCACCCAGCAGCCTGTTTGAGTGCAAAGAGTGGACAATGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 72 bp TCCTCCAGGAGCACGGGATCAGTGGGCATGGACGGTTaGCCCAGACCAGCTGAATTCATGGCCTGTACCTGG +
Preference number: 6 (lower is better)
Translates to: SSRSTGSVGMDG*PRPAEFMACTW
Trigger: CCAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCCGTGCTCCTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp GGTCCCCCGCACCTCCCAAGCTGTGCGGCAGAGTCATaGTTACGAGAGCAACAACAGAAGCAGTGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: GPPHLPSCAAES*LREQQQKQCAH
Trigger: GTGGGCACACTGCTTCTGTTGTTGCTCTCGTAACCATGACTCTGCCGCACAGCTTGGGAGGTGCGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp CCCAGGCCAGAACCACATAGGCCTCTCGGATCTCGCTaGCATGGACATTGGTTGGCGGTGAGGGGATGGTCA +
Preference number: 6 (lower is better)
Translates to: PRPEPHRPLGSR*HGHWLAVRGWS
Trigger: TGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGGCCTATGTGGTTCTGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 72 bp CACATGCTCTTCAGCTCCTTGGGCTCGTCCCCGTGCTaGAACACACTGATGGTGACCTGGCCCGTCTCGGAG +
Preference number: 6 (lower is better)
Translates to: HMLFSSLGSSPC*NTLMVTWPVSE
Trigger: CTCCGAGACGGGCCAGGTCACCATCAGTGTGTTCAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CAA 90 bp CTCAGACTGTGCCTGGACACACGCTGTCACATGCTCTTCAGCTCCTaGGGCTCGTCCCCGTGCTTGAACACACTGATGGTGACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: LRLCLDTRCHMLFSS*GSSPCLNTLMVTWP
Trigger: GGGCCAGGTCACCATCAGTGTGTTCAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCATGTGACAGCGTGTGTCCAGGCACAGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 72 bp TGTCACATGCTCTTCAGCTCCTTGGGCTCGTCCCCGTaGTTGAACACACTGATGGTGACCTGGCCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: CHMLFSSLGSSP*LNTLMVTWPVS
Trigger: CGAGACGGGCCAGGTCACCATCAGTGTGTTCAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCATGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 72 bp CCAGCTCCAGTTTCCCTCAGAGGGCGTATGTGCCACTaGCCACCAGGACTGGGCCCTCCAAGATGTGATCTA +
Preference number: 6 (lower is better)
Translates to: PAPVSLRGRMCH*PPGLGPPRCDL
Trigger: TAGATCACATCTTGGAGGGCCCAGTCCTGGTGGCCAGTGGCACATACGCCCTCTGAGGGAAACTGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 72 bp GCATCATGGTCACCCATGACAACCAACTCTGAGGCCTaGGAGGGGACGCTGCTGCCTACCCTGCTGATGGCT +
Preference number: 6 (lower is better)
Translates to: ASWSPMTTNSEA*EGTLLPTLLMA
Trigger: AGCCATCAGCAGGGTAGGCAGCAGCGTCCCCTCCAAGGCCTCAGAGTTGGTTGTCATGGGTGACCATGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 72 bp CTTCTTGGTGTTGGTCACCTTGCACGTCAGCTGCACTaGGCAGTCCTCCGTGACCTTCCACTGCAACGGCCG +
Preference number: 6 (lower is better)
Translates to: LLGVGHLARQLH*AVLRDLPLQRP
Trigger: CGGCCGTTGCAGTGGAAGGTCACGGAGGACTGCCAAGTGCAGCTGACGTGCAAGGTGACCAACACCAAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 90 bp AGGATCCCATGTCAGGGAGACAGAGGTCTGTGTGTCTCTGAAAGCTaGAACTTGAGCTGGAGGAGGGAGGGTAGCTGGCGGGCCCCGCAA +
Preference number: 6 (lower is better)
Translates to: RIPCQGDRGLCVSES*NLSWRREGSWRAPQ
Trigger: TTGCGGGGCCCGCCAGCTACCCTCCCTCCTCCAGCTCAAGTTCAAGCTTTCAGAGACACACAGACCTCTGTCTCCCTGACATGGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp TCACCTTGCACGTCAGCTGCACTTGGCAGTCCTCCGTaGCCTTCCACTGCAACGGCCGCTCAAAATAGGGAC +
Preference number: 6 (lower is better)
Translates to: SPCTSAALGSPP*PSTATAAQNRD
Trigger: GTCCCTATTTTGAGCGGCCGTTGCAGTGGAAGGTCACGGAGGACTGCCAAGTGCAGCTGACGTGCAAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 72 bp CTAGTTGGTGCCTGCCCTACTCCAGGGGTTTTTCCCTaGGCCAGTAGTATCTGTGCCTCAGGAGGGCATCGG +
Preference number: 6 (lower is better)
Translates to: LVGACPTPGVFP*ASSICASGGHR
Trigger: CCGATGCCCTCCTGAGGCACAGATACTACTGGCTCAGGGAAAAACCCCTGGAGTAGGGCAGGCACCAACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 72 bp CTCGTCCTCCTTGTAGGTGCAGGACACCTTCAGGGATaGCTGGCGGTCTGTGTAGAGGATCTTCCGACGTCT +
Preference number: 6 (lower is better)
Translates to: LVLLVGAGHLQG*LAVCVEDLPTS
Trigger: AGACGTCGGAAGATCCTCTACACAGACCGCCAGGCATCCCTGAAGGTGTCCTGCACCTACAAGGAGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS GCA 72 bp TTCGCTGCTCCCAGAAGGAGGGGAGTAAATGGCTCTTaGAGGATTGGCTGGGGGCTCCCTGAGATTAGGGCT +
Preference number: 6 (lower is better)
Translates to: FAAPRRRGVNGS*RIGWGLPEIRA
Trigger: AGCCCTAATCTCAGGGAGCCCCCAGCCAATCCTGCAAGAGCCATTTACTCCCCTCCTTCTGGGAGCAGCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp GATCCGGATCCCTTCCTCGGTCCCCTGGATTTTCAGTaGAGTTGCAGAGAGGGCACCAATCCTGCCCAACTC +
Preference number: 6 (lower is better)
Translates to: DPDPFLGPLDFQ*SCREGTNPAQL
Trigger: GAGTTGGGCAGGATTGGTGCCCTCTCTGCAACTCCACTGAAAATCCAGGGGACCGAGGAAGGGATCCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 72 bp TGGGGTCCAGGATGTGAAGCCAGATCTCATCCAGGGTaGTGCCCGTCCTTATCCGATCACCACTCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: WGPGCEARSHPG*CPSLSDHHSPD
Trigger: GTCTGGAGAGTGGTGATCGGATAAGGACGGGCACCACCCTGGATGAGATCTGGCTTCACATCCTGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 72 bp TTCATTCTTCCCGCAGTTCAGGAGGGCAAAGCCATATaGGGCAGACGGGGTAGCCAGAGCCTGCTTGACCCT +
Preference number: 6 (lower is better)
Translates to: FILPAVQEGKAI*GRRGSQSLLDP
Trigger: AGGGTCAAGCAGGCTCTGGCTACCCCGTCTGCCCCATATGGCTTTGCCCTCCTGAACTGCGGGAAGAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp TGCCTGGACACACGCTGTCACATGCTCTTCAGCTCCTaGGGCTCGTCCCCGTGCTTGAACACACTGATGGTG +
Preference number: 6 (lower is better)
Translates to: CLDTRCHMLFSS*GSSPCLNTLMV
Trigger: CACCATCAGTGTGTTCAAGCACGGGGACGAGCCCAAGGAGCTGAAGAGCATGTGACAGCGTGTGTCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 72 bp GGGTCAAGCATGAGGGATGCTGTTTTCCAATGGTCCTaGCTTGAACATGGGCTCCCAAGGCCCACAGAGACC +
Preference number: 6 (lower is better)
Translates to: GSSMRDAVFQWS*LEHGLPRPTET
Trigger: GGTCTCTGTGGGCCTTGGGAGCCCATGTTCAAGGCAGGACCATTGGAAAACAGCATCCCTCATGCTTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS GCA 72 bp GGTCCAGGATGTGAAGCCAGATCTCATCCAGGGTGGTaGCCGTCCTTATCCGATCACCACTCTCCAGACGTT +
Preference number: 6 (lower is better)
Translates to: GPGCEARSHPGW*PSLSDHHSPDV
Trigger: AACGTCTGGAGAGTGGTGATCGGATAAGGACGGGCACCACCCTGGATGAGATCTGGCTTCACATCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 72 bp TTCATTCTTCCCGCAGTTCAGGAGGGCAAAGCCATATaGGGCAGACGGGGTAGCTACAGGGAGGTAAGGAGG +
Preference number: 6 (lower is better)
Translates to: FILPAVQEGKAI*GRRGSYREVRR
Trigger: CCTCCTTACCTCCCTGTAGCTACCCCGTCTGCCCCATATGGCTTTGCCCTCCTGAACTGCGGGAAGAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp CCAGAACCACATAGGCCTCTCGGATCTCGCTGGCATGGACATTGGTaGGCGGTGAGGGGATGGTCACAGTATCTTCAAAAGCGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: PEPHRPLGSRWHGHW*AVRGWSQYLQKRLC
Trigger: GCACAGACGCTTTTGAAGATACTGTGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGGCCTATGTGGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp GCCGTGGGCGTTCTTCACTCGCACAGTGTAAGTTGCTaGGTCCTCAATGGCGCATCTCCTAATCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: AVGVLHSHSVSC*VLNGASPNLQG
Trigger: TCCCTGGAGATTAGGAGATGCGCCATTGAGGACTCAGCAACTTACACTGTGCGAGTGAAGAACGCCCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp GGGATCAGTGGGCATGGACGGTTGCCCCAGACCAGCTaGATTCATGGCCTGTACCTGGAACACGTAACTCTT +
Preference number: 6 (lower is better)
Translates to: GISGHGRLPQTS*IHGLYLEHVTL
Trigger: AAGAGTTACGTGTTCCAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCACTGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 72 bp GCCCCCTTTCAAGGATGCCTGGTGCAGGAAGAGGGGTaGTCTGGTTTGGCTCTGTACTCCCACTCAAATCTC +
Preference number: 6 (lower is better)
Translates to: APFQGCLVQEEG*SGLALYSHSNL
Trigger: GAGATTTGAGTGGGAGTACAGAGCCAAACCAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS CCA 72 bp ACCTTGCTGAAGATCCGGATCCCTTCCTCGGTCCCCTaGATTTTCAGTGGAGTTGCAGAGAGGGCACCAATC +
Preference number: 6 (lower is better)
Translates to: TLLKIRIPSSVP*IFSGVAERAPI
Trigger: GATTGGTGCCCTCTCTGCAACTCCACTGAAAATCCAGGGGACCGAGGAAGGGATCCGGATCTTCAGCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 72 bp CCACATAGGCCTCTCGGATCTCGCTGGCATGGACATTaGTTGGCGGTGAGGGGATGGTCACAGTATCTTCAA +
Preference number: 6 (lower is better)
Translates to: PHRPLGSRWHGH*LAVRGWSQYLQ
Trigger: TTGAAGATACTGTGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGGCCTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp TGGGCATGGACGGTTGCCCCAGACCAGCTGAATTCATaGCCTGTACCTGGAACACGTAACTCTTTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: WAWTVAPDQLNS*PVPGTRNSFLA
Trigger: AGCCAGGAAAGAGTTACGTGTTCCAGGTACAGGCCATGAATTCAGCTGGTCTGGGGCAACCGTCCATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp GCGGTGTACGACCCTTTGTCCTCCTCAGACAAGTTCTaGATGATCACTTCCACCAGGCCCTTCTCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: AVYDPLSSSDKF*MITSTRPFSRS
Trigger: TGACCGAGAGAAGGGCCTGGTGGAAGTGATCATCCAGAACTTGTCTGAGGAGGACAAAGGGTCGTACACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp CCCTCTGGAAGAACCACTGAAAGCGAGTCTCCTTCTTaGTGTTGGTCACCTTGCACGTCAGCTGCACTTGGC +
Preference number: 6 (lower is better)
Translates to: PSGRTTESESPS*CWSPCTSAALG
Trigger: GCCAAGTGCAGCTGACGTGCAAGGTGACCAACACCAAGAAGGAGACTCGCTTTCAGTGGTTCTTCCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS TCA 72 bp TATTTGCCCTTGTCTGAGTCTTTGGGGTCCAGGATGTaGAGCCAGATCTCATCCAGGGTGGTGCCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: YLPLSESLGSRM*SQISSRVVPVL
Trigger: AAGGACGGGCACCACCCTGGATGAGATCTGGCTTCACATCCTGGACCCCAAAGACTCAGACAAGGGCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS TCA 72 bp CTCTCGGATCTCGCTGGCATGGACATTGGTTGGCGGTaGGGGGATGGTCACAGTATCTTCAAAAGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: LSDLAGMDIGWR*GDGHSIFKSVC
Trigger: ACAGACGCTTTTGAAGATACTGTGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CCA 72 bp CAACTCTTCAATGCAGAGAAGTCCCGTTCCCGTCTCTaGGTCATACTGACCATCTGGCATCTCTGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: QLFNAEKSRSRL*VILTIWHLCPL
Trigger: CAGAGGGCAGAGATGCCAGATGGTCAGTATGACCCAGAGACGGGAACGGGACTTCTCTGCATTGAAGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CCA 72 bp CCTACTGGTCCATGTAGACTAGACTCAGACTGTGCCTaGACACACGCTGTCACATGCTCTTCAGCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PTGPCRLDSDCA*THAVTCSSAPW
Trigger: CCAAGGAGCTGAAGAGCATGTGACAGCGTGTGTCCAGGCACAGTCTGAGTCTAGTCTACATGGACCAGTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CAA 72 bp CATAGGCCTCTCGGATCTCGCTGGCATGGACATTGGTaGGCGGTGAGGGGATGGTCACAGTATCTTCAAAAG +
Preference number: 6 (lower is better)
Translates to: HRPLGSRWHGHW*AVRGWSQYLQK
Trigger: CTTTTGAAGATACTGTGACCATCCCCTCACCGCCAACCAATGTCCATGCCAGCGAGATCCGAGAGGCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS TCA 72 bp TGCGGAGATGTCTTCATCGGCATCAGTGACTATGACTaGGTAGGTGCCCAAATCCTCGAGGCCGGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: CGDVFIGISDYD*VGAQILEAGFF
Trigger: AAAGAACCCGGCCTCGAGGATTTGGGCACCTACTCAGTCATAGTCACTGATGCCGATGAAGACATCTCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 72 bp CATAGTCACCCCCTCCATCACGATTCATCAATGTCCTaGCCCATCCGGGTCAAGCATGAGGGATGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: HSHPLHHDSSMS*PIRVKHEGCCF
Trigger: AAAACAGCATCCCTCATGCTTGACCCGGATGGGGCAGGACATTGATGAATCGTGATGGAGGGGGTGACTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS GCA 72 bp TCCTCAAAAGCTTGCCCTGAGAGATCTGTTGAGAGCTaGCGGACTTCCTTCCCTGCAGCTATTTCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: SSKACPERSVES*RTSFPAAISRV
Trigger: CACTCTGGAAATAGCTGCAGGGAAGGAAGTCCGGCAGCTCTCAACAGATCTCTCAGGGCAAGCTTTTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 72 bp TCTGTCAGCCTCTGTCAGACTCCAAGACTCAAGCAGTaGCCTCTGGTCGCTGCTAAACAAGTCATGACACAG +
Preference number: 6 (lower is better)
Translates to: SVSLCQTPRLKQ*PLVAAKQVMTQ
Trigger: CTGTGTCATGACTTGTTTAGCAGCGACCAGAGGGCACTGCTTGAGTCTTGGAGTCTGACAGAGGCTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp CTCGAGGACCTCAGTAGGCTCCCATCTCGGAACCACTaGATGCTCTCAGCATCTAACACATCTTCCGAAAAC +
Preference number: 6 (lower is better)
Translates to: LEDLSRLPSRNH*MLSASNTSSEN
Trigger: GTTTTCGGAAGATGTGTTAGATGCTGAGAGCATCCAGTGGTTCCGAGATGGGAGCCTACTGAGGTCCTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 90 bp GGGATGGTCACAGTATCTTCAAAAGCGTCTGTGCTGATGGTGATCTaGTTTCCCAGATCAAAGGGGATCTCTGTCTTCCTCCGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GMVTVSSKASVLMVI*FPRSKGISVFLRAA
Trigger: TGCAGCCCGGAGGAAGACAGAGATCCCCTTTGATCTGGGAAACAAGATCACCATCAGCACAGACGCTTTTGAAGATACTGTGACCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 90 bp TGGGCAGACGTACCTGGTGCCTTGGATGGGTTTGTTGTTAACTGTTaGCCACTCAGATGTCCCCACCTTCCGGGAGTAGATGTAATAACC +
Preference number: 6 (lower is better)
Translates to: WADVPGALDGFVVNC*PLRCPHLPGVDVIT
Trigger: GGTTATTACATCTACTCCCGGAAGGTGGGGACATCTGAGTGGCAAACAGTTAACAACAAACCCATCCAAGGCACCAGGTACGTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp CCCTGCAGCTATTTCCAGAGTGTATTTGCCCTTGTCTaGGTCTTTGGGGTCCAGGATGTGAAGCCAGATCTC +
Preference number: 6 (lower is better)
Translates to: PCSYFQSVFALV*VFGVQDVKPDL
Trigger: GAGATCTGGCTTCACATCCTGGACCCCAAAGACTCAGACAAGGGCAAATACACTCTGGAAATAGCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS TCA 72 bp GCAGACCTCTCACCACTTTGGCACGATTCTTCTCGATaGTGGCCAAGGTTTTCAGTCTCTGGTGTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: ADLSPLWHDSSR*WPRFSVSGVQP
Trigger: TGGCTGAACACCAGAGACTGAAAACCTTGGCCATCATCGAGAAGAATCGTGCCAAAGTGGTGAGAGGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS TCA 72 bp GGCAGCCTTAGCCTCCTCCTTCCCTTTCCTCACATATaGAAAATGCCAGAACAGTACCTGGCGCAGGGTAAA +
Preference number: 6 (lower is better)
Translates to: GSLSLLLPFPHI*KMPEQYLAQGK
Trigger: TTTACCCTGCGCCAGGTACTGTTCTGGCATTTTTCATATGTGAGGAAAGGGAAGGAGGAGGCTAAGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448831.1
CDS CCA 72 bp GCTTCATTATCATTATGGCCCCCTTTCAAGGATGCCTaGTGCAGGAAGAGGGGTGATCTGGTTTGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: ASLSLWPPFKDA*CRKRGDLVWLC
Trigger: ACAGAGCCAAACCAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS CAA 72 bp CCATTGCATCCTCAAAAGCTTGCCCTGAGAGATCTGTaGAGAGCTGCCGGACTTCCTTCCCTGCAGCTATTT +
Preference number: 6 (lower is better)
Translates to: PLHPQKLALRDL*RAAGLPSLQLF
Trigger: AAATAGCTGCAGGGAAGGAAGTCCGGCAGCTCTCAACAGATCTCTCAGGGCAAGCTTTTGAGGATGCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS CAA 72 bp GTACCTGGTGCCTTGGATGGGTTTGTTGTTAACTGTTaGCCACTCAGATGTCCCCACCTTCCGGGAGTAGAT +
Preference number: 6 (lower is better)
Translates to: VPGALDGFVVNC*PLRCPHLPGVD
Trigger: ATCTACTCCCGGAAGGTGGGGACATCTGAGTGGCAAACAGTTAACAACAAACCCATCCAAGGCACCAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 72 bp GTTTTGGGACTCGGACTGGCTTCCTCGCTCCTCAGCTaGCAAACAGCCGGTTGTACGACTTTACTTTGTGAT +
Preference number: 6 (lower is better)
Translates to: VLGLGLASSLLS*QTAGCTTLLCD
Trigger: ATCACAAAGTAAAGTCGTACAACCGGCTGTTTGCAAGCTGAGGAGCGAGGAAGCCAGTCCGAGTCCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp TTATCTTCCATGATAGTGGCCACATCCGGCAGACCTCTCACCACTTaGGCACGATTCTTCTCGATGATGGCCAAGGTTTTCAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: LSSMIVATSGRPLTT*ARFFSMMAKVFSLW
Trigger: CCAGAGACTGAAAACCTTGGCCATCATCGAGAAGAATCGTGCCAAAGTGGTGAGAGGTCTGCCGGATGTGGCCACTATCATGGAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS TCA 72 bp ATTCTTCAGCCAAGAGATTTCAGGGGTGGGGTCTCCTaGGACGATGCAAGTCAAGCACAGGGTCTTATCTTC +
Preference number: 6 (lower is better)
Translates to: ILQPRDFRGGVS*DDASQAQGLIF
Trigger: GAAGATAAGACCCTGTGCTTGACTTGCATCGTCTCAGGAGACCCCACCCCTGAAATCTCTTGGCTGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS TCA 72 bp TGTACGACCCTTTGTCCTCCTCAGACAAGTTCTGGATaGTCACTTCCACCAGGCCCTTCTCTCGGTCAAAAT +
Preference number: 6 (lower is better)
Translates to: CTTLCPPQTSSG*SLPPGPSLGQN
Trigger: ATTTTGACCGAGAGAAGGGCCTGGTGGAAGTGATCATCCAGAACTTGTCTGAGGAGGACAAAGGGTCGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS GCA 72 bp GGACTTCCTTCCCTGCAGCTATTTCCAGAGTGTATTTaGCCTTGTCTGAGTCTTTGGGGTCCAGGATGTGAA +
Preference number: 6 (lower is better)
Translates to: GLPSLQLFPECI*PCLSLWGPGCE
Trigger: TTCACATCCTGGACCCCAAAGACTCAGACAAGGGCAAATACACTCTGGAAATAGCTGCAGGGAAGGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338909.9
ENST00000374434.4
CDS GCA 72 bp TCATTATCATTATGGCCCCCTTTCAAGGATGCCTGGTaGAGGAAGAGGGGTGATCTGGTTTGGCTCTGTACT +
Preference number: 6 (lower is better)
Translates to: SLSLWPPFKDAW*RKRGDLVWLCT
Trigger: AGTACAGAGCCAAACCAGATCACCCCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS GCA 72 bp TTTTGGGACTCGGACTGGCTTCCTCGCTCCTCAGCTTaGAAACAGCCGGTTGTACGACTTTACTTTGTGATT +
Preference number: 6 (lower is better)
Translates to: FWDSDWLPRSSA*KQPVVRLYFVI
Trigger: AATCACAAAGTAAAGTCGTACAACCGGCTGTTTGCAAGCTGAGGAGCGAGGAAGCCAGTCCGAGTCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp AAAGCAAAGGCAGCCAACCCCAAACCCAGCGCCACATaGTACATCTTCAAGACTTTGGGCTTTGTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: KAKAANPKPSAT*YIFKTLGFVLE
Trigger: TTCAAGGACAAAGCCCAAAGTCTTGAAGATGTACCATGTGGCGCTGGGTTTGGGGTTGGCTGCCTTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 72 bp AAACCTGGTGCCTTGGATGGGTTTGTTGTTAACTGTTaGCCACTCAGATGTCCCCACCTTCCGGGAGTAGAT +
Preference number: 6 (lower is better)
Translates to: KPGALDGFVVNC*PLRCPHLPGVD
Trigger: ATCTACTCCCGGAAGGTGGGGACATCTGAGTGGCAAACAGTTAACAACAAACCCATCCAAGGCACCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp ATGATCACTTCCACCAGGCCCTTCTCTCGGTCAAAATaGATTTTGCGGTTCGGCGAGCTGAAGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MITSTRPFSRSK*ILRFGELKISL
Trigger: CAAGGAGATCTTCAGCTCGCCGAACCGCAAAATCAATTTTGACCGAGAGAAGGGCCTGGTGGAAGTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 90 bp GGGAACTGTAAACCTGGTGCCTTGGATGGGTTTGTTGTTAACTGTTaGCCACTCAGATGTCCCCACCTTCCGGGAGTAGATGTAATAACC +
Preference number: 6 (lower is better)
Translates to: GNCKPGALDGFVVNC*PLRCPHLPGVDVIT
Trigger: GGTTATTACATCTACTCCCGGAAGGTGGGGACATCTGAGTGGCAAACAGTTAACAACAAACCCATCCAAGGCACCAGGTTTACAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 90 bp ACTTTTGAGGTTTTGGGACTCGGACTGGCTTCCTCGCTCCTCAGCTaGCAAACAGCCGGTTGTACGACTTTACTTTGTGATTGTGTGAGT +
Preference number: 6 (lower is better)
Translates to: TFEVLGLGLASSLLS*QTAGCTTLLCDCVS
Trigger: ACTCACACAATCACAAAGTAAAGTCGTACAACCGGCTGTTTGCAAGCTGAGGAGCGAGGAAGCCAGTCCGAGTCCCAAAACCTCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp GCAGCCAACCCCAAACCCAGCGCCACATGGTACATCTTCAAGACTTaGGGCTTTGTCCTTGAAAAAGAACATGTGGCTGTTAATACCTGC +
Preference number: 6 (lower is better)
Translates to: AANPKPSATWYIFKT*GFVLEKEHVAVNTC
Trigger: GCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGTCTTGAAGATGTACCATGTGGCGCTGGGTTTGGGGTTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp GATCGCTCAGGCCATACTGGTTCATTGCTCGCACTCTaGAGACATACGACTTCTTTTTCTCCAGGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: DRSGHTGSLLAL*RHTTSFSPGPE
Trigger: TTCTGGACCTGGAGAAAAAGAAGTCGTATGTCTTCAGAGTGCGAGCAATGAACCAGTATGGCCTGAGCGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 72 bp CAGTGTCAAGGTAATCTGGTTTTTGGCTTTTCCATCTaGGAGTTGAGCGGTGTACGACCCTTTGTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QCQGNLVFGFSI*ELSGVRPFVLL
Trigger: GAGGAGGACAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTTGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp GTCCCAGTCCTGCCATTTACTAAGCTACAAGGGGCTTaGGCAAGTTATGTAACCTCTCCATGCCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: VPVLPFTKLQGA*ASYVTSPCLSF
Trigger: GAAACTGAGGCATGGAGAGGTTACATAACTTGCCAAAGCCCCTTGTAGCTTAGTAAATGGCAGGACTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp CACCAGTGTCAAGGTAATCTGGTTTTTGGCTTTTCCATCTTGGAGTaGAGCGGTGTACGACCCTTTGTCCTCCTCAGACAAGTTCTGGAT +
Preference number: 6 (lower is better)
Translates to: HQCQGNLVFGFSILE*SGVRPFVLLRQVLD
Trigger: ATCCAGAACTTGTCTGAGGAGGACAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTTGACACTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 90 bp GTCATCCACCAGTGTCAAGGTAATCTGGTTTTTGGCTTTTCCATCTaGGAGTTGAGCGGTGTACGACCCTTTGTCCTCCTCAGACAAGTT +
Preference number: 6 (lower is better)
Translates to: VIHQCQGNLVFGFSI*ELSGVRPFVLLRQV
Trigger: AACTTGTCTGAGGAGGACAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTTGACACTGGTGGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 90 bp TGCTGTTGTCAAGATAGGGAGCAAGTTCTCATGAGATCTGCTTGTTaGGAAGTGTGTAGCACTTCCTGCTTTGCTCTTTCTCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: CCCQDREQVLMRSAC*EVCSTSCFALSPSP
Trigger: AGGAGAGGGAGAAAGAGCAAAGCAGGAAGTGCTACACACTTCCAAACAAGCAGATCTCATGAGAACTTGCTCCCTATCTTGACAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp AAGGTAATCTGGTTTTTGGCTTTTCCATCTTGGAGTTaGGCGGTGTACGACCCTTTGTCCTCCTCAGACAAG +
Preference number: 6 (lower is better)
Translates to: KVIWFLAFPSWS*AVYDPLSSSDK
Trigger: CTTGTCTGAGGAGGACAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp ATTTTGCGGTTCGGCGAGCTGAAGATCTCCTTGTTGTaGAAGATTAGATGTAGCTCAGCGGCTGGAGATAAC +
Preference number: 6 (lower is better)
Translates to: ILRFGELKISLL*KIRCSSAAGDN
Trigger: GTTATCTCCAGCCGCTGAGCTACATCTAATCTTCAACAACAAGGAGATCTTCAGCTCGCCGAACCGCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp TTGATTTTGCGGTTCGGCGAGCTGAAGATCTCCTTGTaGTTGAAGATTAGATGTAGCTCAGCGGCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: LILRFGELKISL*LKIRCSSAAGD
Trigger: ATCTCCAGCCGCTGAGCTACATCTAATCTTCAACAACAAGGAGATCTTCAGCTCGCCGAACCGCAAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 72 bp CAAGGTAATCTGGTTTTTGGCTTTTCCATCTTGGAGTaGAGCGGTGTACGACCCTTTGTCCTCCTCAGACAA +
Preference number: 6 (lower is better)
Translates to: QGNLVFGFSILE*SGVRPFVLLRQ
Trigger: TTGTCTGAGGAGGACAAAGGGTCGTACACCGCTCAACTCCAAGATGGAAAAGCCAAAAACCAGATTACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CAA 90 bp CTGGGATGCAAAAACACCGAGTCCTTTCAGAGCCCTCAAAGAGAATaGTCATCCAGAGACACGCAAGGATGCTCTAGCTTAGAGAAAAAT +
Preference number: 6 (lower is better)
Translates to: LGCKNTESFQSPQRE*SSRDTQGCSSLEKN
Trigger: ATTTTTCTCTAAGCTAGAGCATCCTTGCGTGTCTCTGGATGACAATTCTCTTTGAGGGCTCTGAAAGGACTCGGTGTTTTTGCATCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp AACCCAGCGCCACATGGTACATCTTCAAGACTTTGGGCTTTGTCCTaGAAAAAGAACATGTGGCTGTTAATACCTGCACTAATGCTGGGA +
Preference number: 6 (lower is better)
Translates to: NPAPHGTSSRLWALS*KKNMWLLIPALMLG
Trigger: TCCCAGCATTAGTGCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGTCTTGAAGATGTACCATGTGGCGCTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp ACCCCAAACCCAGCGCCACATGGTACATCTTCAAGACTTTGGGCTTaGTCCTTGAAAAAGAACATGTGGCTGTTAATACCTGCACTAATG +
Preference number: 6 (lower is better)
Translates to: TPNPAPHGTSSRLWA*SLKKNMWLLIPALM
Trigger: CATTAGTGCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGTCTTGAAGATGTACCATGTGGCGCTGGGTTTGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp TGCAGCTTTCATGGATGTACAAACAGCCTGGAGACATTCCCAAACTaGCTAGAACAACTTTGTGGAATAAGTGGTCACCAGCGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: CSFHGCTNSLETFPN*LEQLCGISGHQRGR
Trigger: TCTACCACGCTGGTGACCACTTATTCCACAAAGTTGTTCTAGCAAGTTTGGGAATGTCTCCAGGCTGTTTGTACATCCATGAAAGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp CGCTTTGCTGTTGTCAAGATAGGGAGCAAGTTCTCATaGGATCTGCTTGTTTGGAAGTGTGTAGCACTTCCT +
Preference number: 6 (lower is better)
Translates to: RFAVVKIGSKFS*DLLVWKCVALP
Trigger: AGGAAGTGCTACACACTTCCAAACAAGCAGATCTCATGAGAACTTGCTCCCTATCTTGACAACAGCAAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 72 bp CAGAACAGTACCTGGCGCAGGGTAAATATTGTGAAATaGTGGGCTTCATTATCATTATGGCCCCCTTTCAAG +
Preference number: 6 (lower is better)
Translates to: QNSTWRRVNIVK*WASLSLWPPFK
Trigger: CTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCATTTCACAATATTTACCCTGCGCCAGGTACTGTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS GCA 72 bp AACATGTGGCTGTTAATACCTGCACTAATGCTGGGATaGAAAAACACCGAGTCCTTTCAGAGCCCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: NMWLLIPALMLG*KNTESFQSPQR
Trigger: TCTTTGAGGGCTCTGAAAGGACTCGGTGTTTTTGCATCCCAGCATTAGTGCAGGTATTAACAGCCACATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp GTAAATATTGTGAAATGCTGGGCTTCATTATCATTATaGCCCCCTTTCAAGGATGCCTGGTGCAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: VNIVKCWASLSL*PPFKDAWCRKR
Trigger: CCTCTTCCTGCACCAGGCATCCTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCATTTCACAATATTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS CCA 72 bp GGAGGGATGAGACCAAGGCATGGTCATCTCTATCCATaGAGTCCTGCAAATAGCACATTCTCAACAAAGTTT +
Preference number: 6 (lower is better)
Translates to: GGMRPRHGHLYP*SPANSTFSTKF
Trigger: AAACTTTGTTGAGAATGTGCTATTTGCAGGACTCCATGGATAGAGATGACCATGCCTTGGTCTCATCCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 72 bp ACAGTATCTTCAAAAGCGTCTGTGCTGATGGTGATCTaGTTTCCCAGATCAAAGGGGATCTCTGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: TVSSKASVLMVI*FPRSKGISVFL
Trigger: GAGGAAGACAGAGATCCCCTTTGATCTGGGAAACAAGATCACCATCAGCACAGACGCTTTTGAAGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374434.4
ENST00000475306.1
CDS CAA 72 bp AAATTGATTTTGCGGTTCGGCGAGCTGAAGATCTCCTaGTTGTTGAAGATTAGATGTAGCTCAGCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: KLILRFGELKIS*LLKIRCSSAAG
Trigger: TCCAGCCGCTGAGCTACATCTAATCTTCAACAACAAGGAGATCTTCAGCTCGCCGAACCGCAAAATCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374434.4
CDS CCA 72 bp AACAGTACCTGGCGCAGGGTAAATATTGTGAAATGCTaGGCTTCATTATCATTATGGCCCCCTTTCAAGGAT +
Preference number: 6 (lower is better)
Translates to: NSTWRRVNIVKC*ASLSLWPPFKD
Trigger: ATCCTTGAAAGGGGGCCATAATGATAATGAAGCCCAGCATTTCACAATATTTACCCTGCGCCAGGTACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448831.1
ENST00000475306.1
CDS CAA 72 bp CAAGATAGGGAGCAAGTTCTCATGAGATCTGCTTGTTaGGAAGTGTGTAGCACTTCCTGCTTTGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: QDREQVLMRSAC*EVCSTSCFALS
Trigger: AGAAAGAGCAAAGCAGGAAGTGCTACACACTTCCAAACAAGCAGATCTCATGAGAACTTGCTCCCTATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 72 bp CCAGCGCCACATGGTACATCTTCAAGACTTTGGGCTTaGTCCTTGAAAAAGAACATGTGGCTGTTAATACCT +
Preference number: 6 (lower is better)
Translates to: PAPHGTSSRLWA*SLKKNMWLLIP
Trigger: AGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGTCTTGAAGATGTACCATGTGGCGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp GAGAAAAATGTCCTTCTCATCCTGTCCCTTCTTGATAAGACCCAATaGTGGACCTCTTTCTCTCTCTTCACCTATCAACGTTCTCCTAGA +
Preference number: 6 (lower is better)
Translates to: EKNVLLILSLLDKTQ*WTSFSLFTYQRSPR
Trigger: TCTAGGAGAACGTTGATAGGTGAAGAGAGAGAAAGAGGTCCACAATTGGGTCTTATCAAGAAGGGACAGGATGAGAAGGACATTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 72 bp AGAGACCACTTCATCATCTTTGTACGTTCAGTACCGTaGAGAGTGGCACAAAATAGATGCTCTGAGTTTACT +
Preference number: 6 (lower is better)
Translates to: RDHFIIFVRSVP*RVAQNRCSEFT
Trigger: AGTAAACTCAGAGCATCTATTTTGTGCCACTCTGCACGGTACTGAACGTACAAAGATGATGAAGTGGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9
CDS GCA 72 bp TTGCAGGTAGAACTAGATGACCTCACATATGAAAAATaGCAGAACAGTACCTGGCGCAGGGTAAATATTGTG +
Preference number: 6 (lower is better)
Translates to: LQVELDDLTYEK*QNSTWRRVNIV
Trigger: CACAATATTTACCCTGCGCCAGGTACTGTTCTGGCATTTTTCATATGTGAGGTCATCTAGTTCTACCTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp TTTTTGTCAAGACAGGGTTTTGAACATGTTGCAGACTaGTCTCAAACTCCCAAACTCCTGAGCTCAAGCAAT +
Preference number: 6 (lower is better)
Translates to: FLSRQGFEHVAD*SQTPKLLSSSN
Trigger: ATTGCTTGAGCTCAGGAGTTTGGGAGTTTGAGACCAGTCTGCAACATGTTCAAAACCCTGTCTTGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CAA 90 bp TCTATCCATGGAGTCCTGCAAATAGCACATTCTCAACAAAGTTTGTaGAAAAAGACCATCTGGGTTCAAGTCCCAGTCCTGCCATTTACT +
Preference number: 6 (lower is better)
Translates to: SIHGVLQIAHSQQSL*KKTIWVQVPVLPFT
Trigger: AGTAAATGGCAGGACTGGGACTTGAACCCAGATGGTCTTTTTCAACAAACTTTGTTGAGAATGTGCTATTTGCAGGACTCCATGGATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp CAGCTTGCAAACAGCCGGTTGTACGACTTTACTTTGTaGTTGTGTGAGTCAATAGTCCTTAATAAACTCCCT +
Preference number: 6 (lower is better)
Translates to: QLANSRLYDFTL*LCESIVLNKLP
Trigger: AGGGAGTTTATTAAGGACTATTGACTCACACAATCACAAAGTAAAGTCGTACAACCGGCTGTTTGCAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS GCA 72 bp TTTGTCCTTGAAAAAGAACATGTGGCTGTTAATACCTaGACTAATGCTGGGATGCAAAAACACCGAGTCCTT +
Preference number: 6 (lower is better)
Translates to: FVLEKEHVAVNT*TNAGMQKHRVL
Trigger: AAGGACTCGGTGTTTTTGCATCCCAGCATTAGTGCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp TCAAGACTTTGGGCTTTGTCCTTGAAAAAGAACATGTaGCTGTTAATACCTGCACTAATGCTGGGATGCAAA +
Preference number: 6 (lower is better)
Translates to: SRLWALSLKKNM*LLIPALMLGCK
Trigger: TTTGCATCCCAGCATTAGTGCAGGTATTAACAGCCACATGTTCTTTTTCAAGGACAAAGCCCAAAGTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS TCA 72 bp CTTTGTGGAATAAGTGGTCACCAGCGTGGTAGAATTTaGAGGTTCAGGTCAATTCTTCCTAAAAATATTGCC +
Preference number: 6 (lower is better)
Translates to: LCGISGHQRGRI*RFRSILPKNIA
Trigger: GGCAATATTTTTAGGAAGAATTGACCTGAACCTTCAAATTCTACCACGCTGGTGACCACTTATTCCACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475306.1
CDS CCA 72 bp ACTTCATCATCTTTGTACGTTCAGTACCGTGCAGAGTaGCACAAAATAGATGCTCTGAGTTTACTGAATGAA +
Preference number: 6 (lower is better)
Translates to: TSSSLYVQYRAE*HKIDALSLLNE
Trigger: TTCATTCAGTAAACTCAGAGCATCTATTTTGTGCCACTCTGCACGGTACTGAACGTACAAAGATGATGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338909.9