Pregenerated sensors for MYOD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000129152Ensembl transcript IDs: ENST00000250003.4
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGTATTACAAAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTaGGTTACGGTTACACCTGCTACATTTGGGACCGGAGTGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: KVLQKVVLNRETGWG*VTVTPATFGTGVHW Trigger: CCAGTGCACTCCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTTTGTAATACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR GCA 90 bp | CACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTGCTCTGGCACCGCGCTGTGTCCTTaGCCTGTGGGGCGGGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: HHTPCLRDKYSPRGSCSGTALCP*PVGRGR Trigger: CCGCCCCCGCCCCACAGGGCAAGGACACAGCGCGGT...GCCAGAGCAGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR CCA 90 bp | CCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGGACCGGTTAAGTTCAATCTTTTaGGCGCGAGGGACCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: PGNGLGVGYGYTCYIWDRLSSIF*ARGTLG Trigger: CCCTAGGGTCCCTCGCGCCCAAAAGATTGAACTTAA...CCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTGCTTACACCTGCTACATTTaGGACCGGAGTGCACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: CSTTHHASEINTAPGAPAYTCYI*DRSALG Trigger: ACCCAGTGCACTCCGGTCCCAAATGTAGCAGGTGTA...AGCAGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR GCA 90 bp | AACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCATTTGGGACCGGAGTaGACTGGGTCTCACGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: NVQIPCSTTHHASEINTAHLGPE*TGSHAP Trigger: GGGGGCGTGAGACCCAGTGCACTCCGGTCCCAAATG...GGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR CCA 90 bp | AACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCTGTGTCCTTGCCCTGTaGGGCGGGGGCGGAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: NVQIPCSTTHHASEINTACVLAL*GGGGNF Trigger: GAAGTTTCCGCCCCCGCCCCACAGGGCAAGGACACA...GGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR TCA 90 bp | CAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGTACAAAAAGTGGTCCTaGACCGGGAAACGGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QIPCSTTHHASEINTAPGYKKWS*TGKRVG Trigger: CCCAACCCGTTTCCCGGTTCAGGACCACTTTTTGTA...CCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR CCA 90 bp | AACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCTCAAGGTTCAGCTCTaGCCCACCGAGGAACACGGA | + |
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Preference number: 2 (lower is better) Translates to: NVQIPCSTTHHASEINTALKVQL*PTEEHG Trigger: TCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGAG...GGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR GCA 72 bp | CCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTaGTACATTTGGGACCGGAGTGCACTGGGTCTCACG | + |
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Preference number: 3 (lower is better) Translates to: PGNGLGVGYGYT*YIWDRSALGLT Trigger: CGTGAGACCCAGTGCACTCCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR-3UTR CAA 90 bp | CCAAATAACCGGTGCATCCCGGGGCAGGGCTTAGGTCTGCGAGGGTCTCACCCCTTTAAGTTCAATCTTTaGGGCGCGAGGGACCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: PNNRCIPGQGLGLRGSHPFKFNL*GARDPR Trigger: CCTAGGGTCCCTCGCGCCCAAAAGATTGAACTTAAA...GGGGTGAGACCCTCGCAGACCTAAGCCCTGCCCCGGGATGCACCGGTTATTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR CCA 72 bp | CAAAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTaGGTTACGGTTACACCTGCTACATTTGGGACCGGA | + |
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Preference number: 3 (lower is better) Translates to: QKVVLNRETGWG*VTVTPATFGTG Trigger: TCCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR CCA 72 bp | GTATTACAAAAAGTGGTCCTGAACCGGGAAACGGGTTaGGGGTGGGTTACGGTTACACCTGCTACATTTGGG | + |
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Preference number: 3 (lower is better) Translates to: VLQKVVLNRETG*GWVTVTPATFG Trigger: CCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTTTGTAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCGGCCACCATCCCGTGGCCGGAACTTTCTaGCGCTCGGGAGCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: ARGTLGAPSLGRVGGHHPVAGTF*RSGAPA Trigger: AGCCGGGGCTCCCGAGCGGCAGAAAGTTCCGGCCAC...GGGATGGTGGCCGCCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCGGCCACCATCCCTGCTCTCTCCCTCGCTaGGGGCGGCAGCCTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ARGTLGAPSLGRVGGHHPCSLPR*GRQPLA Trigger: GGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCA...GGGATGGTGGCCGCCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCGGCCACCATCCCCGGCGTTGGTGGTCTTaGGCTTGCACGCCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ARGTLGAPSLGRVGGHHPRRWWS*ACTPCR Trigger: CCTGCAAGGCGTGCAAGCGCAAGACCACCAACGCCG...GGGATGGTGGCCGCCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCGGCCACCATCCCAGGCCTCATTTACTTTaGTCAGGCGGCGCCGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: ARGTLGAPSLGRVGGHHPRPHLL*SGGAAR Trigger: GCGAGCGGCGCCGCCTGAGCAAAGTAAATGAGGCCT...GGGATGGTGGCCGCCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCGGCCACCATCCCGGCTCTCGGTGGAGATaGGCTCCACGATGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: ARGTLGAPSLGRVGGHHPGSRWR*APRCWT Trigger: TGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCC...GGGATGGTGGCCGCCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | TTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGGGGGCGGCAGCCTCTTaGCTGCGCGGAGGCGACTCA | + |
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Preference number: 4 (lower is better) Translates to: FNLLGARDPRGTIPRAGGGAAAS*LRGGDS Trigger: TGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCC...CCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAA 69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCTCCGAGAAGGGTGCTGCGGGCGCGGCACGGTCCTaGCTTCGCCCAACCCAAGCG | + |
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Preference number: 4 (lower is better) Translates to: PPRNTERPSQWVSEKGAAGAARS*LRPTQA Trigger: CGCTTGGGTTGGGCGAAGCCAGGACCGTGCCGCGCC...CGCAGCACCCTTCTCGGAGACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | AACCTAGCCCCTCAAGGTTCAGCTCTGGCCCACCGAGGAACACGGAGCGGCCATGGGTGGGGTCGCCGCTaGTCTCTCCCTCGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: NLAPQGSALAHRGTRSGHGWGRR*SLPRWG Trigger: CCCCCAGCGAGGGAGAGAGCAGCGGCGACCCCACCC...ATGGCCGCTCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGAGGGGCTAGGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | TCAAGGTTCAGCTCTGGCCCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCACCGCGCTGTGTCCTTaGCCTGTGGGGCGGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SRFSSGPPRNTERPSQWVTALCP*PVGRGR Trigger: CCGCCCCCGCCCCACAGGGCAAGGACACAGCGCGGT...GACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CCAAATAACCGGTGCATCCCGGGGCAGGGCTTAGGTCTGCGAGGGTCTCACCCCCCTGGTGGTGCCCGCTaGGCGCGCGCACATGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: PNNRCIPGQGLGLRGSHPPGGAR*ARAHAR Trigger: ACGAGCATGTGCGCGCGCCCAGCGGGCACCACCAGG...GGGGTGAGACCCTCGCAGACCTAAGCCCTGCCCCGGGATGCACCGGTTATTTGG 68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GGGGCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCATCCCTCGGGCGGGTaGGCGGCCACCATCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GAGAETSVLPPLLPQERSHPSGG*AATIPS Trigger: TGAGGGGATGGTGGCCGCCCACCCGCCCGAGGGATG...CGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | CATGGGGGAGGGCGCGAGAAAGCTGAACCTAGCCCCTCAAGGTTCAGCTCTGGCATGCTCGTCCTCACGTaGGCCCGGGGCCGGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: HGGGREKAEPSPSRFSSGMLVLT*ARGRVH Trigger: GTGCACCCGGCCCCGGGCGCACGTGAGGACGAGCAT...GCCAGAGCTGAACCTTGAGGGGCTAGGTTCAGCTTTCTCGCGCCCTCCCCCATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGAGTTGGAGCGCGGGCTaGACGCGTCGGAGTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LWGGGGNFSSPASPTSRESWSAG*TRRSRR Trigger: GCGGCGACTCCGACGCGTCCAGCCCGCGCTCCAACT...CTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGCCCCACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCTCCGAGAAGGGTGCTGCGAGGGTCTCACCCCCATaGGGGAGGGCGCGAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PPRNTERPSQWVSEKGAARVSPP*GRARES Trigger: GCTTTCTCGCGCCCTCCCCCATGGGGGTGAGACCCT...CGCAGCACCCTTCTCGGAGACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | TCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCGCGGGGAAGTGCGAGTaGTCTTCGGGTTTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SIFWARGTLGAPSLGRVGAGKCE*SSGFRS Trigger: GCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGC...GCCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CATGGGGGAGGGCGCGAGAAAGCTGAACCTAGCCCCTCAAGGTTCAGCTCTGGCCACTCTTCCCGGGCCTaGGTTCGCTGGGCGCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: HGGGREKAEPSPSRFSSGHSSRA*VRWAPR Trigger: ACGAGGCGCCCAGCGAACCCAGGCCCGGGAAGAGTG...GCCAGAGCTGAACCTTGAGGGGCTAGGTTCAGCTTTCTCGCGCCCTCCCCCATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | CACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTGCTCTGGCCTGGGCGCGCGCACATaGTCGTCCTCACGTGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: HHTPCLRDKYSPRGSCSGLGART*SSSRAP Trigger: GGGCGCACGTGAGGACGAGCATGTGCGCGCGCCCAG...GCCAGAGCAGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GGGGCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCATTTGGGACCGGAGTaGACTGGGTCTCACGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: GAGAETSVLPPLLPQERSHLGPE*TGSHAP Trigger: GGGGGCGTGAGACCCAGTGCACTCCGGTCCCAAATG...CGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GCCCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCTCCGAGAAGGGTGCTGGGGCAACCGCTGGTTTaGATTGCTCGACGTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: AHRGTRSGHRNGSPRRVLGQPLV*IARRAA Trigger: CGCTGCACGTCGAGCAATCCAAACCAGCGGTTGCCC...CAGCACCCTTCTCGGAGACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | TGGCCCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCTCCGAGAAGGGTGCGAGCGGCCATCGCAATaGGTCTCCGAGAAGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: WPTEEHGAAIAMGLREGCERPSQ*VSEKGA Trigger: AGCACCCTTCTCGGAGACCCATTGCGATGGCCGCTC...GCACCCTTCTCGGAGACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | TTTAAGTTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGTGCCGTCGGAGCAGTTaGAGCGCGGGCTGGACGCGT | + |
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Preference number: 4 (lower is better) Translates to: FKFNLLGARDPRGTIPRACRRSS*SAGWTR Trigger: ACGCGTCCAGCCCGCGCTCCAACTGCTCCGACGGCA...CGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAACTTAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR TCA 90 bp | GGGGCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGAAAGTGCTGGCAGTCTaGATGCCCACCCACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GAGAETSVLPPLLPQERSKVLAV*MPTHCP Trigger: GGGACAGTGGGTGGGCATTCAGACTGCCAGCACTTT...CGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR TCA 90 bp | CCAAATAACCGGTGCATCCCGGGGCAGGGCTTAGGTCTGCGAGGGTCTCACCCCTTTATTTTGATCACCTaGGCGAGCGCCCGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PNNRCIPGQGLGLRGSHPFILIT*ASARGS Trigger: CGAGCCGCGGGCGCTCGCTCAGGTGATCAAAATAAA...GGGGTGAGACCCTCGCAGACCTAAGCCCTGCCCCGGGATGCACCGGTTATTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | TTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGGTCCGGCCTGATTTGTaGTTAAGGAAAGCGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: FNLLGARDPRGTIPRAGGVRPDL*LRKAAA Trigger: TGCCGCCGCTTTCCTTAACCACAAATCAGGCCGGAC...CCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | TTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGACCTTGGGCAACCGCTaGTTTGGATTGCTCGACGTG | + |
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Preference number: 4 (lower is better) Translates to: FNLLGARDPRGTIPRAGGTLGNR*FGLLDV Trigger: CACGTCGAGCAATCCAAACCAGCGGTTGCCCAAGGT...CCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | TTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGTCCCCTCAGAGCACCTaGTATATCGGGTTGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FNLLGARDPRGTIPRAGGSPQST*YIGLGF Trigger: GAACCCCAACCCGATATACCAGGTGCTCTGAGGGGA...CCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR TCA 90 bp | TTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGGGTGGGCTCTCCTGTCCGGCCTaGTTTGTGGTTAAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FNLLGARDPRGTIPRAGGLSCPA*FVVKES Trigger: GCTTTCCTTAACCACAAATCAGGCCGGACAGGAGAG...CCCACCCGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCCGGCAGCCTCTTGCCTaGGCGGAGGCGACTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KSGPEPGNGLGVGYGYTCRQPLA*AEATQK Trigger: CTTCTGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCG...GCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGTGCGGCGGTCGGCGTTaGTGGTCTTGCGCTTGCACG | + |
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Preference number: 4 (lower is better) Translates to: PEPGNGLGVGYGYTCYIWCGGRR*WSCACT Trigger: CGTGCAAGCGCAAGACCACCAACGCCGACCGCCGCA...CCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | AACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGGACCGGAGTGCACGGGCCTGGGTTCGCTaGGCGCCTCGTTGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NGLGVGYGYTCYIWDRSARAWVR*APRCSR Trigger: CCTACTACAACGAGGCGCCCAGCGAACCCAGGCCCG...TGCACTCCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR TCA 90 bp | TGTGGGGCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGACGTGCAGCGCTTaGGTGTCTCAAAGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: CGAGAETSVLPPLLPQERSTCSA*VSQRPH Trigger: ATGAGGCCTTTGAGACACTCAAGCGCTGCACGTCGA...CCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGCCCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGAGGAGCGCGCCCACGTaGATCAGGCGCGGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GNFSSPASPTSREVAFKARSAPT*IRRGSR Trigger: CCTGGACCCGCGCCTGATGCACGTGGGCGCGCTCCT...CGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTGCGCTTGCACGCCTTaGAGGCCCACAGTAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KSGPEPGNGLGVGYGYTCCACTP*RPTVGS Trigger: GCTGCCTACTGTGGGCCTGCAAGGCGTGCAAGCGCA...GCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | CAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCATGGTGGCGGCCTTaGGGCGGTCGGCGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QIPCSTTHHASEINTAPGAWWRP*GGRRWW Trigger: CCACCAACGCCGACCGCCGCAAGGCCGCCACCATGC...CCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | GCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTAGATGCGCTCCACGATaGTGGACAGGCAGTCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: AGAETSVLPPLLPQERSLRCAPR*WTGSLG Trigger: GCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCT...AAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CAAAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTCCGCAGGGCTCTCGGTaGAGATGCGCTCCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QKVVLNRETGWGWVTVTPPQGSR*RCAPRC Trigger: GCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGG...AGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTGTGTCCTTGCCCTGTaGGGCGGGGGCGGAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSGPEPGNGLGVGYGYTCCVLAL*GGGGNF Trigger: GAAGTTTCCGCCCCCGCCCCACAGGGCAAGGACACA...GCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CATGGGGGAGGGCGCGAGAAAGCTGAACCTAGCCCCTCAAGGTTCAGCTCTGGCGAAACGGGTTGGGGGTaGGTTACGGTTACACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGGREKAEPSPSRFSSGETGWG*VTVTPA Trigger: AGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTC...GCCAGAGCTGAACCTTGAGGGGCTAGGTTCAGCTTTCTCGCGCCCTCCCCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR TCA 90 bp | AACCTAGCCCCTCAAGGTTCAGCTCTGGCCCACCGAGGAACACGGAGCGGCCATTTAGCGCCTTTATTTTaGTCACCTGAGCGAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLAPQGSALAHRGTRSGHLAPLF*SPERAP Trigger: GGGCGCTCGCTCAGGTGATCAAAATAAAGGCGCTAA...ATGGCCGCTCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGAGGGGCTAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | CCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGCCCCCAAATAACCGGTaGATCCCGGGGCAGGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PEPGNGLGVGYGYTCYIWPPNNR*IPGQGL Trigger: TAAGCCCTGCCCCGGGATGCACCGGTTATTTGGGGG...CCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | CCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGGACCGGCGCGGCTCGCCCGCCTaGGGTATAAACGTACAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PGNGLGVGYGYTCYIWDRRGSPA*GINVQI Trigger: AATTTGTACGTTTATACCGCAGGCGGGCGAGCCGCG...CCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTAACCGGGAAACGGGTTaGGGGTGGGTTACGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AGAETSVLPPLLPQERSLNRETG*GWVTVT Trigger: TGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTT...AAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | TGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTGCTTGCTGGCAGTCTGAATaGCCACCCACTGTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSTTHHASEINTAPGAPACWQSE*PPTVPH Trigger: GTGGGGGACAGTGGGTGGGCATTCAGACTGCCAGCA...AGCAGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | CAAAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTTGGTGGTCTTGCGCTTaGACGCCTTGCAGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QKVVLNRETGWGWVTVTPWWSCA*TPCRPT Trigger: TGTGGGCCTGCAAGGCGTGCAAGCGCAAGACCACCA...AGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | CAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGTCCATATCCTGGCGGTaGCGCGGCACGGTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIPCSTTHHASEINTAPGSISWR*RGTVLA Trigger: AGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGA...CCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTAGAAGTCGTCCGTTGTaGCAAAGGAGCAGAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGAETSVLPPLLPQERSLRSRPL*QRSRES Trigger: GCTCTCTCTGCTCCTTTGCCACAACGGACGACTTCT...AAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGGGCGGTCGGCGTTGGTaGTCTTGCGCTTGCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNFSSPASPTSREVAFKAGGRRW*SCACTP Trigger: AGGCGTGCAAGCGCAAGACCACCAACGCCGACCGCC...CGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR TCA 90 bp | CACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTGCTCTGGCTACAAAAAGTGGTCCTaGACCGGGAAACGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHTPCLRDKYSPRGSCSGYKKWS*TGKRVG Trigger: CCCAACCCGTTTCCCGGTTCAGGACCACTTTTTGTA...GCCAGAGCAGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGCTGTAGTAGCTCCATATCCTaGCGGTGGCGCGGCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPPLLPQERSLLKRCSSSIS*RWRGTV Trigger: GACCGTGCCGCGCCACCGCCAGGATATGGAGCTACT...ACAGCGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | TTTAAGTTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGTACACCTGCTACATTTaGGACCGGAGTGCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKFNLLGARDPRGTIPRAYTCYI*DRSALG Trigger: ACCCAGTGCACTCCGGTCCCAAATGTAGCAGGTGTA...CGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAACTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | AACCTAGCCCCTCAAGGTTCAGCTCTGGCCCACCGAGGAACACGGAGCGGCCATCAGGGGCTCCTGCTCTaGCAAAGCAACTCTTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: NLAPQGSALAHRGTRSGHQGLLL*QSNSYL Trigger: TAAATAAGAGTTGCTTTGCCAGAGCAGGAGCCCCTG...ATGGCCGCTCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGAGGGGCTAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGCTGTTGCGCTCCACGATGCTaGACAGGCAGTCTAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPPLLPQERSLLKRCCAPRC*TGSLGS Trigger: CGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCA...ACAGCGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | AACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCGTCCGGTGACTGGGTaGGGTCGCCGCTGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQIPCSTTHHASEINTARPVTG*GRRCSL Trigger: GAGAGAGCAGCGGCGACCCCACCCAGTCACCGGACG...GGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCGGTTACGGTTACACCTaGTACATTTGGGACCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSGPEPGNGLGVGYGYTCGYGYT*YIWDRS Trigger: ACTCCGGTCCCAAATGTAGCAGGTGTAACCGTAACC...GCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | ACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGCTGTCTCAAGGTTCAGCTCTaGCCCACCGAGGAACACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSVLPPLLPQERSLLKRCLKVQL*PTEEHG Trigger: TCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGAG...ACAGCGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR GCA 90 bp | AACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCACCGCCGCGGGGAAGTaGGAGTGCTCTTCGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQIPCSTTHHASEINTATAAGK*ECSSGF Trigger: GAAACCCGAAGAGCACTCGCACTTCCCCGCGGCGGT...GGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | AACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAAGCGGCAGAGAGTaGCCGGAACTTTCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVQIPCSTTHHASEINTAPSGRE*PELSAA Trigger: AGCGGCAGAAAGTTCCGGCCACTCTCTGCCGCTTGG...GGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CCA 90 bp | GGTATAAACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATCCTGGTATATCGGGTTaGGGTTCGCACCCGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GINVQIPCSTTHHASEINPGISG*GSHPQG Trigger: GCCCTGCGGGTGCGAACCCCAACCCGATATACCAGG...ATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTTTATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| 3UTR CAA 72 bp | AGTATTACAAAAAGTGGTCCTGAACCGGGAAACGGGTaGGGGGTGGGTTACGGTTACACCTGCTACATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SITKSGPEPGNG*GVGYGYTCYIW Trigger: CCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTTTGTAATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | GGTTCGCACCCGCAGGGCACTGCGGGGCGGCGTCCGGTGACTGGGTaGGGTCGCCGCTGCTCTCTCCCTCGCTGGGGGCGGCAGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSHPQGTAGRRPVTG*GRRCSLPRWGRQPL Trigger: AAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCAGCGGCGACCCCACCCAGTCACCGGACGCCGCCCCGCAGTGCCCTGCGGGTGCGAACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | TCACGTGCGCCCGGGGCCGGGTGCACCGCCGCGGGGAAGTGCGAGTaGTCTTCGGGTTTCAGGAGCGCGCCCACGTGCATCAGGCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAPGAGCTAAGKCE*SSGFRSAPTCIRRG Trigger: CCCGCGCCTGATGCACGTGGGCGCGCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGCGGCGGTGCACCCGGCCCCGGGCGCACGTGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | GGTCGCCGCTGCTCTCTCCCTCGCTGGGGGCGGCAGCCTCTTGCCTaGGCGGAGGCGACTCAGAAGGCACGTCCGCCAGCAGGAGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRCSLPRWGRQPLA*AEATQKARPPAGGR Trigger: CCGCCCTCCTGCTGGCGGACGTGCCTTCTGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCAGCGGCGACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | CTGGGCGCGCGCACATGCTCGTCCTCACGTGCGCCCGGGGCCGGGTaGACCGCCGCGGGGAAGTGCGAGTGCTCTTCGGGTTTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGARTCSSSRAPGAG*TAAGKCECSSGFRS Trigger: GCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGCGGCGGTGCACCCGGCCCCGGGCGCACGTGAGGACGAGCATGTGCGCGCGCCCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | GGCCGCTGTAGTCCATCATGCCGTCGGAGCAGTTGGAGCGCGGGCTaGACGCGTCGGAGTCGCCGCTGTAGTGCTCGCCGCCGCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRCSPSCRRSSWSAG*TRRSRRCSARRRGP Trigger: CGGGCCGCGGCGGCGAGCACTACAGCGGCGACTCCGACGCGTCCAGCCCGCGCTCCAACTGCTCCGACGGCATGATGGACTACAGCGGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | CGGCGTCCGGTGACTGGGTGGGGTCGCCGCTGCTCTCTCCCTCGCTaGGGGCGGCAGCCTCTTGCCTGCGCGGAGGCGACTCAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRPVTGWGRRCSLPR*GRQPLACAEATQKA Trigger: TGCCTTCTGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCAGCGGCGACCCCACCCAGTCACCGGACGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | TCGTCCTCACGTGCGCCCGGGGCCGGGTGCACCGCCGCGGGGAAGTaGGAGTGCTCTTCGGGTTTCAGGAGCGCGCCCACGTGCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRAPGAGCTAAGK*ECSSGFRSAPTCIR Trigger: CCTGATGCACGTGGGCGCGCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGCGGCGGTGCACCCGGCCCCGGGCGCACGTGAGGACGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | CGTCCGCCAGCAGGAGGGCGGGCGCCGCAGGGCTCTCGGTGGAGATaGGCTCCACGATGCTGGACAGGCAGTCTAGGCTCGACACCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPPAGGRAPQGSRWR*APRCWTGSLGSTPP Trigger: CGGCGGTGTCGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGGCGCCCGCCCTCCTGCTGGCGGACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | GGGCGGGCGCCGCAGGGCTCTCGGTGGAGATGCGCTCCACGATGCTaGACAGGCAGTCTAGGCTCGACACCGCCGCACTCTTCCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRAPQGSRWRCAPRC*TGSLGSTPPHSSRA Trigger: GGCCCGGGAAGAGTGCGGCGGTGTCGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGGCGCCCGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | GGAGGGCGGGCGCCGCAGGGCTCTCGGTGGAGATGCGCTCCACGATaGTGGACAGGCAGTCTAGGCTCGACACCGCCGCACTCTTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRAPQGSRWRCAPR*WTGSLGSTPPHSSR Trigger: CCGGGAAGAGTGCGGCGGTGTCGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGGCGCCCGCCCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | GTCAGGTCTACGTCGCGGAGCGGTGGCGACAGTAGCTCCATATCCTaGCGGTGGCGCGGCACGGTCCTGGCTTCGCCCAACCCAAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSTSRSGGDSSSIS*RWRGTVLASPNPSG Trigger: GCCGCTTGGGTTGGGCGAAGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGAGCTACTGTCGCCACCGCTCCGCGACGTAGACCTGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | AAGGCACGTCCGCCAGCAGGAGGGCGGGCGCCGCAGGGCTCTCGGTaGAGATGCGCTCCACGATGCTGGACAGGCAGTCTAGGCTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: KARPPAGGRAPQGSR*RCAPRCWTGSLGST Trigger: TGTCGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGGCGCCCGCCCTCCTGCTGGCGGACGTGCCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | GCGGGGAAGTGCGAGTGCTCTTCGGGTTTCAGGAGCGCGCCCACGTaGATCAGGCGCGGGTCCAGGTCTTCGAAGAAGCGCAGGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGKCECSSGFRSAPT*IRRGSRSSKKRRSG Trigger: CCCGGACCTGCGCTTCTTCGAAGACCTGGACCCGCGCCTGATGCACGTGGGCGCGCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | TCTACGTCGCGGAGCGGTGGCGACAGTAGCTCCATATCCTGGCGGTaGCGCGGCACGGTCCTGGCTTCGCCCAACCCAAGCGGCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STSRSGGDSSSISWR*RGTVLASPNPSGRE Trigger: CTCTCTGCCGCTTGGGTTGGGCGAAGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGAGCTACTGTCGCCACCGCTCCGCGACGTAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | GTGGCGACAGTAGCTCCATATCCTGGCGGTGGCGCGGCACGGTCCTaGCTTCGCCCAACCCAAGCGGCAGAGAGTGGCCGGAACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VATVAPYPGGGAARS*LRPTQAAESGRNFL Trigger: CAGAAAGTTCCGGCCACTCTCTGCCGCTTGGGTTGGGCGAAGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGAGCTACTGTCGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | GGTTCAGCTCTGGCCCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCTCCGACCTGGTATATCGGGTaGGGGTTCGCACCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSALAHRGTRSGHRNGSPTWYIG*GFAPAG Trigger: CCCTGCGGGTGCGAACCCCAACCCGATATACCAGGT...CGGAGACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGGGCCAGAGCTGAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 90 bp | CCTGGCTTCGCCCAACCCAAGCGGCAGAGAGTGGCCGGAACTTTCTaGCGCTCGGGAGCCCCGGCTGTAGATAGCAAAGTGCTGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGFAQPKRQRVAGTF*RSGAPAVDSKVLAV Trigger: GACTGCCAGCACTTTGCTATCTACAGCCGGGGCTCCCGAGCGGCAGAAAGTTCCGGCCACTCTCTGCCGCTTGGGTTGGGCGAAGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTGGTCCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCCGCATGGTGGCGGCCTaGCGGCGGTCGGCGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSGPEPGNGLGVGYGYTCRMVAA*RRSALV Trigger: CACCAACGCCGACCGCCGCAAGGCCGCCACCATGCG...GCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGGACCACTTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | AACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGGACCGGAGTGCAAACCGCGCTGTGTCCTaGCCCTGTGGGGCGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NGLGVGYGYTCYIWDRSANRAVS*PCGAGA Trigger: CGCCCCCGCCCCACAGGGCAAGGACACAGCGCGGTT...TGCACTCCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | CCACCGAGGAACACGGAGCGGCCATCGCAATGGGTCTCCGAGAAGGGTGCTGCGGAACCGGGAAACGGGTaGGGGGTGGGTTACGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PPRNTERPSQWVSEKGAAEPGNG*GVGYGY Trigger: GTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTC...CGCAGCACCCTTCTCGGAGACCCATTGCGATGGCCGCTCCGTGTTCCTCGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 90 bp | GGTCCGGGGAGTCGAAACACGGGTCGTCATAGAAGTCGTCCGTTGTaGCAAAGGAGCAGAGAGAGCCGTCGGGGGCCGTCAGGTCTACGT | + |
|
Preference number: 5 (lower is better) Translates to: GPGSRNTGRHRSRPL*QRSRESRRGPSGLR Trigger: ACGTAGACCTGACGGCCCCCGACGGCTCTCTCTGCTCCTTTGCCACAACGGACGACTTCTATGACGACCCGTGTTTCGACTCCCCGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | CCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGGACCGGTTGCGCTTGCACGCCTaGCAGGCCCACAGTAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PGNGLGVGYGYTCYIWDRLRLHA*QAHSRQ Trigger: CTGCCTACTGTGGGCCTGCAAGGCGTGCAAGCGCAA...CCGGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | GGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGGGGGGCGGCAGCCTCTaGCCTGCGCGGAGGCGACTC | + |
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Preference number: 5 (lower is better) Translates to: GNFSSPASPTSREVAFKAGGGSL*PARRRL Trigger: GAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCC...CGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | CCCATGGGGGAGGGCGCGAGAAAGCTGAACCTAGCCCCTCAAGGTTCAGCTCTGAACCGCTGGTTTGGATaGCTCGACGTGCAGCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: PMGEGARKLNLAPQGSALNRWFG*LDVQRL Trigger: CAAGCGCTGCACGTCGAGCAATCCAAACCAGCGGTT...CAGAGCTGAACCTTGAGGGGCTAGGTTCAGCTTTCTCGCGCCCTCCCCCATGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | GCGGGGGCGGAAACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTCTCGACGTGCAGCGCTaGAGTGTCTCAAAGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: AGAETSVLPPLLPQERSLLDVQR*SVSKAS Trigger: TGAGGCCTTTGAGACACTCAAGCGCTGCACGTCGAG...AAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGTTTCCGCCCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | TTTAAGTTCAATCTTTTGGGCGCGAGGGACCCTAGGGGCACCATCCCTCGGGCGTGGGCAACCGCTGGTTaGGATTGCTCGACGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FKFNLLGARDPRGTIPRAWATAG*DCSTCS Trigger: GCTGCACGTCGAGCAATCCAAACCAGCGGTTGCCCA...CGCCCGAGGGATGGTGCCCCTAGGGTCCCTCGCGCCCAAAAGATTGAACTTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | AACCTAGCCCCTCAAGGTTCAGCTCTGGCCCACCGAGGAACACGGAGCGGCCATCATAGAAGTCGTCCGTaGTGGCAAAGGAGCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: NLAPQGSALAHRGTRSGHHRSRP*WQRSRE Trigger: CTCTCTGCTCCTTTGCCACAACGGACGACTTCTATG...ATGGCCGCTCCGTGTTCCTCGGTGGGCCAGAGCTGAACCTTGAGGGGCTAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | TGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTGCTTCGGCGTTGGTGGTCTaGCGCTTGCACGCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CSTTHHASEINTAPGAPASALVV*RLHALQ Trigger: CTGCAAGGCGTGCAAGCGCAAGACCACCAACGCCGA...AGCAGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | CCCTGTAGCACCACACACCATGCCTCAGAGATAAATACAGCCCCAGGGGCTCCTCCTGTCCGGCCTGATTaGTGGTTAAGGAAAGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: PCSTTHHASEINTAPGAPPVRPD*WLRKAA Trigger: CGCCGCTTTCCTTAACCACAAATCAGGCCGGACAGG...AGGAGCCCCTGGGGCTGTATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGCTGTTTGCGGCGGTCGGCGTaGGTGGTCTTGCGCTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: TSVLPPLLPQERSLLKRCLRRSA*VVLRLH Trigger: GTGCAAGCGCAAGACCACCAACGCCGACCGCCGCAA...ACAGCGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | CCTGAACCGGGAAACGGGTTGGGGGTGGGTTACGGTTACACCTGCTACATTTGGTTACACCTGCTACATTaGGGACCGGAGTGCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: PEPGNGLGVGYGYTCYIWLHLLH*GPECTG Trigger: CCCAGTGCACTCCGGTCCCAAATGTAGCAGGTGTAA...CCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCCGGTTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGCTGTAAGGCCTCATTTACTTaGCTCAGGCGGCGCCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: TSVLPPLLPQERSLLKRCKASFT*LRRRRS Trigger: CGAGCGGCGCCGCCTGAGCAAAGTAAATGAGGCCTT...ACAGCGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | GGTATAAACGTACAAATTCCCTGTAGCACCACACACCATGCCTCAGAGATAAATATGCCGTCGGAGCAGTaGGAGCGCGGGCTGGACGCG | + |
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Preference number: 5 (lower is better) Translates to: GINVQIPCSTTHHASEINMPSEQ*ERGLDA Trigger: CGCGTCCAGCCCGCGCTCCAACTGCTCCGACGGCAT...ATTTATCTCTGAGGCATGGTGTGTGGTGCTACAGGGAATTTGTACGTTTATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTTCTCCCGCCTCTCCTACCTCAAGAGAGGTCGCTTTTAAAGCGCTGTTTTAAGTTCAATCTTTaGGGCGCGAGGGACCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TSVLPPLLPQERSLLKRCFKFNL*GARDPR Trigger: CCTAGGGTCCCTCGCGCCCAAAAGATTGAACTTAAA...ACAGCGCTTTAAAAGCGACCTCTCTTGAGGTAGGAGAGGCGGGAGAACTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | CGTGCGCCCGGGGCCGGGTGCACCGCCGCGGGGAAGTaGGAGTGCTCTTCGGGTTTCAGGAGCGCGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: RAPGAGCTAAGK*ECSSGFRSAPT Trigger: CGTGGGCGCGCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGCGGCGGTGCACCCGGCCCCGGGCGCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | CCCGGGGCCGGGTGCACCGCCGCGGGGAAGTGCGAGTaGTCTTCGGGTTTCAGGAGCGCGCCCACGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: PGAGCTAAGKCE*SSGFRSAPTCI Trigger: GATGCACGTGGGCGCGCTCCTGAAACCCGAAGAGCACTCGCACTTCCCCGCGGCGGTGCACCCGGCCCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | CGCACATGCTCGTCCTCACGTGCGCCCGGGGCCGGGTaGACCGCCGCGGGGAAGTGCGAGTGCTCTTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: RTCSSSRAPGAG*TAAGKCECSSG Trigger: ACCCGAAGAGCACTCGCACTTCCCCGCGGCGGTGCACCCGGCCCCGGGCGCACGTGAGGACGAGCATGTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | CCGCTGCTCTCTCCCTCGCTGGGGGCGGCAGCCTCTTaGCTGCGCGGAGGCGACTCAGAAGGCACGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PLLSPSLGAAAS*LRGGDSEGTSA Trigger: GGCGGACGTGCCTTCTGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCAGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | GTGACTGGGTGGGGTCGCCGCTGCTCTCTCCCTCGCTaGGGGCGGCAGCCTCTTGCCTGCGCGGAGGCGACT | + |
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Preference number: 6 (lower is better) Translates to: VTGWGRRCSLPR*GRQPLACAEAT Trigger: AGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCAGCGGCGACCCCACCCAGTCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CAA 72 bp | GCCGCTGCTCTCTCCCTCGCTGGGGGCGGCAGCCTCTaGCCTGCGCGGAGGCGACTCAGAAGGCACGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: AAALSLAGGGSL*PARRRLRRHVR Trigger: GCGGACGTGCCTTCTGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCAGCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | GGCGGTCGGCGTTGGTGGTCTTGCGCTTGCACGCCTTaGAGGCCCACAGTAGGCAGCGGCCCGCCTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GGRRWWSCACTP*RPTVGSGPPGG Trigger: ACCACCAGGCGGGCCGCTGCCTACTGTGGGCCTGCAAGGCGTGCAAGCGCAAGACCACCAACGCCGACCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | GCAGGAGGGCGGGCGCCGCAGGGCTCTCGGTGGAGATaGGCTCCACGATGCTGGACAGGCAGTCTAGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: AGGRAPQGSRWR*APRCWTGSLGS Trigger: CGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGGCGCCCGCCCTCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | TGCTCTCTCCCTCGCTGGGGGCGGCAGCCTCTTGCCTaGGCGGAGGCGACTCAGAAGGCACGTCCGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSLPRWGRQPLA*AEATQKARPPA Trigger: TGCTGGCGGACGTGCCTTCTGAGTCGCCTCCGCGCAGGCAAGAGGCTGCCGCCCCCAGCGAGGGAGAGAGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | GGGGGCCGCTGTAGTCCATCATGCCGTCGGAGCAGTTaGAGCGCGGGCTGGACGCGTCGGAGTCGCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GGRCSPSCRRSS*SAGWTRRSRRC Trigger: ACAGCGGCGACTCCGACGCGTCCAGCCCGCGCTCCAACTGCTCCGACGGCATGATGGACTACAGCGGCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | GCGCCGCAGGGCTCTCGGTGGAGATGCGCTCCACGATaGTGGACAGGCAGTCTAGGCTCGACACCGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: APQGSRWRCAPR*WTGSLGSTPPH Trigger: GTGCGGCGGTGTCGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | ACGGTCCTGGCTTCGCCCAACCCAAGCGGCAGAGAGTaGCCGGAACTTTCTGCCGCTCGGGAGCCCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TVLASPNPSGRE*PELSAAREPRL Trigger: CAGCCGGGGCTCCCGAGCGGCAGAAAGTTCCGGCCACTCTCTGCCGCTTGGGTTGGGCGAAGCCAGGACCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | GTAGCTCCATATCCTGGCGGTGGCGCGGCACGGTCCTaGCTTCGCCCAACCCAAGCGGCAGAGAGTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: VAPYPGGGAARS*LRPTQAAESGR Trigger: CCGGCCACTCTCTGCCGCTTGGGTTGGGCGAAGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGAGCTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | CGGAGCGGTGGCGACAGTAGCTCCATATCCTGGCGGTaGCGCGGCACGGTCCTGGCTTCGCCCAACCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: RSGGDSSSISWR*RGTVLASPNPS Trigger: GCTTGGGTTGGGCGAAGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGAGCTACTGTCGCCACCGCTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | ACGTCGCGGAGCGGTGGCGACAGTAGCTCCATATCCTaGCGGTGGCGCGGCACGGTCCTGGCTTCGCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TSRSGGDSSSIS*RWRGTVLASPN Trigger: GTTGGGCGAAGCCAGGACCGTGCCGCGCCACCGCCAGGATATGGAGCTACTGTCGCCACCGCTCCGCGACGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | AGTCCATCATGCCGTCGGAGCAGTTGGAGCGCGGGCTaGACGCGTCGGAGTCGCCGCTGTAGTGCTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SPSCRRSSWSAG*TRRSRRCSARR Trigger: GCGGCGAGCACTACAGCGGCGACTCCGACGCGTCCAGCCCGCGCTCCAACTGCTCCGACGGCATGATGGACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | CCGCAGGGCTCTCGGTGGAGATGCGCTCCACGATGCTaGACAGGCAGTCTAGGCTCGACACCGCCGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: PQGSRWRCAPRC*TGSLGSTPPHS Trigger: AGAGTGCGGCGGTGTCGAGCCTAGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGAGCCCTGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | TGCGAGTGCTCTTCGGGTTTCAGGAGCGCGCCCACGTaGATCAGGCGCGGGTCCAGGTCTTCGAAGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: CECSSGFRSAPT*IRRGSRSSKKR Trigger: GCGCTTCTTCGAAGACCTGGACCCGCGCCTGATGCACGTGGGCGCGCTCCTGAAACCCGAAGAGCACTCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS GCA 72 bp | GCCCAACCCAAGCGGCAGAGAGTGGCCGGAACTTTCTaGCGCTCGGGAGCCCCGGCTGTAGATAGCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: AQPKRQRVAGTF*RSGAPAVDSKV Trigger: CACTTTGCTATCTACAGCCGGGGCTCCCGAGCGGCAGAAAGTTCCGGCCACTCTCTGCCGCTTGGGTTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CAA 90 bp | GCAGGTCCGGGGAGTCGAAACACGGGTCGTCATAGAAGTCGTCCGTaGTGGCAAAGGAGCAGAGAGAGCCGTCGGGGGCCGTCAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: AGPGSRNTGRHRSRP*WQRSRESRRGPSGL Trigger: TAGACCTGACGGCCCCCGACGGCTCTCTCTGCTCCTTTGCCACAACGGACGACTTCTATGACGACCCGTGTTTCGACTCCCCGGACCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CAA 72 bp | GGGAGTCGAAACACGGGTCGTCATAGAAGTCGTCCGTaGTGGCAAAGGAGCAGAGAGAGCCGTCGGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GSRNTGRHRSRP*WQRSRESRRGP Trigger: CGGCCCCCGACGGCTCTCTCTGCTCCTTTGCCACAACGGACGACTTCTATGACGACCCGTGTTTCGACTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS CCA 72 bp | AGTCGAAACACGGGTCGTCATAGAAGTCGTCCGTTGTaGCAAAGGAGCAGAGAGAGCCGTCGGGGGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: SRNTGRHRSRPL*QRSRESRRGPS Trigger: TGACGGCCCCCGACGGCTCTCTCTGCTCCTTTGCCACAACGGACGACTTCTATGACGACCCGTGTTTCGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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| CDS TCA 72 bp | GCAACCGCTGGTTTGGATTGCTCGACGTGCAGCGCTTaGGTGTCTCAAAGGCCTCATTTACTTTGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ATAGLDCSTCSA*VSQRPHLLCSG Trigger: GCCTGAGCAAAGTAAATGAGGCCTTTGAGACACTCAAGCGCTGCACGTCGAGCAATCCAAACCAGCGGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250003.4 |
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