RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO9B (Homo sapiens)

Ensembl gene IDs: ENSG00000099331

Ensembl transcript IDs: ENST00000397274.6, ENST00000593411.1, ENST00000593533.1, ENST00000594824.5, ENST00000594971.5, ENST00000595618.5, ENST00000595641.5, ENST00000596942.5, ENST00000597073.5, ENST00000597572.1, ENST00000597881.1, ENST00000598101.1, ENST00000598419.1, ENST00000598464.1, ENST00000599420.5, ENST00000601490.1, ENST00000601749.1, ENST00000602158.1, ENST00000602177.1, ENST00000682292.1

Found 1488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCGTGATGTACACGGAATGTATCTGGTCCGGGCGGCGGGCAGGTaGCTCCCGGCGCCGCACTGGGGCAGCCGCCTCCCGGGCACCCGG +
Preference number: 1 (lower is better)
Translates to: GRDVHGMYLVRAAGR*LPAPHWGSRLPGTR
Trigger: CCGGGTGCCCGGGAGGCGGCTGCCCCAGTGCGGCGCCGGGAGCCACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTACATCACGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CCA 90 bp CTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGCCGTGGGCATGATGGGGGTCCGCCG +
Preference number: 1 (lower is better)
Translates to: LPGTRCPARQVGGQA*WELDVGRGHDGGPP
Trigger: CGGCGGACCCCCATCATGCCCACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR TCA 90 bp CTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCTGGTCCGGGCGGCGGGCAGGTGGCT +
Preference number: 1 (lower is better)
Translates to: LGAPGRPALAGLPRA*CTRNVSGPGGGQVA
Trigger: AGCCACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CCA 90 bp GTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACACGCCGAAGTGGCCAGGCTCAACGC +
Preference number: 1 (lower is better)
Translates to: VPGASPARWAPRPCR*SGCLRTRRSGQAQR
Trigger: GCGTTGAGCCTGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR CCA 90 bp ACAGGCCGTGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATaGGCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGC +
Preference number: 1 (lower is better)
Translates to: TGRASPRVPGASPAR*APRPCRWSGCLRTR
Trigger: GCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCACGGCCTGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR CCA 90 bp GATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTaGCGCCCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACT +
Preference number: 1 (lower is better)
Translates to: DSGSFSEGRTLALQL*RPAPVQGPSSDMQT
Trigger: AGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR CCA 90 bp CAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTGCCCCTGACTCATGTCCTGGCTCCA +
Preference number: 1 (lower is better)
Translates to: QPLASGRVTATFKSP*HVRSMVPLTHVLAP
Trigger: TGGAGCCAGGACATGAGTCAGGGGCACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR TCA 90 bp GCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCT +
Preference number: 1 (lower is better)
Translates to: ALTLHLGPVPTSRHS*AFDSGSFSEGRTLA
Trigger: AGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 2 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRRRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 2 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIRRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CAA 90 bp TGGCGCCCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCCGAGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: WRPAPVQGPSSDMQT*SAVALSHWSGPRRG
Trigger: CCCCCGCCTCGGGCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGATTTGGGGGCTGCGTaGGAGGGGGCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAADLGAA*EGAWLQ
Trigger: CTGGAGCCAGGCCCCCTCGCACGCAGCCCCCAAATC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGTGGCTCTCAGCCATTaGTCTGGCCCGAGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAVALSH*SGPRRG
Trigger: CCCCCGCCTCGGGCCAGACCAATGGCTGAGAGCCAC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAACCACAGCAGGGTCTaGGCCTCAGACGCGCAGTGG +
Preference number: 2 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGNHSRV*ASDAQW
Trigger: CCACTGCGCGTCTGAGGCTCAGACCCTGCTGTGGTT...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCTCCCGGGCACCCGGTaGCCAGCGAGGCAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQLPGTR*PARQVG
Trigger: TCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTAGATGGCAGGGTTACTaGAGCTTCAGGGCCGGCAGC +
Preference number: 2 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRRWQGY*SFRAGS
Trigger: GCTGCCGGCCCTGAAGCTGCAGTAACCCTGCCATCT...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597073.5
3UTR-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 2 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPRRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGCAGGGCGCCCTGCACTaGCAGGTCTGCCCCGGGCGT +
Preference number: 2 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLQGALH*QVCPGR
Trigger: ACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTG...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CAA 90 bp TCCACGTGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTaGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAGTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: STCSRSFSSTMGTEA*SLVRLSTHTPKWPG
Trigger: GCCTGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACACGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGATTTGGGGGCTGCGTaGGAGGGGGCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LLQPLASGRVTATFKSPWDLGAA*EGAWLQ
Trigger: CTGGAGCCAGGCCCCCTCGCACGCAGCCCCCAAATC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCGATTTGGGGGCTGCGTaGGAGGGGGCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: AKSSLLQPLASGRVTATFDLGAA*EGAWLQ
Trigger: CTGGAGCCAGGCCCCCTCGCACGCAGCCCCCAAATC...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 25 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGTACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCCGAGTACCTCCGCTTaGCCCCAGGTGGCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEPSTSA*PQVAGH
Trigger: ATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGGAGTGGGGAGATGTaGGGCCGCAGGTGGAGATGT +
Preference number: 2 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKGSGEM*GRRWRC
Trigger: ACATCTCCACCTGCGGCCTCACATCTCCCCACTCCC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGTCCATGGTGCCCCTaGCTCATGTCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKGPWCP*LMSWLQ
Trigger: CTGGAGCCAGGACATGAGTCAGGGGCACCATGGACC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGGTCCATGGTGCCCCTaGCTCATGTCCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEGPWCP*LMSWLQ
Trigger: CTGGAGCCAGGACATGAGTCAGGGGCACCATGGACC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGCGCCCAGCTCCAGTaGAGGGGCCGTCCTCGGACA +
Preference number: 2 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKGAQLQ*RGRPRT
Trigger: TGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCC...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGGGCGCCCAGCTCCAGTaGAGGGGCCGTCCTCGGACA +
Preference number: 2 (lower is better)
Translates to: KSSLLQPLASGRVTATFKGAQLQ*RGRPRT
Trigger: TGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCC...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 2 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAACTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: APCPRFVATCPGVWGSGPYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTCAGGGCGCCCTGCACTaGCAGGTCTGCCCCGGGCGT +
Preference number: 2 (lower is better)
Translates to: TWGRCPPHVTLELLILDPQGALH*QVCPGR
Trigger: ACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTG...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCCGAGTACCTCCGCTTaGCCCCAGGTGGCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: SLLQPLASGRVTATFKSPPSTSA*PQVAGH
Trigger: ATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCCACAGGTGCGTCCATaGTTTGGGGGCTGCGTGCGA +
Preference number: 2 (lower is better)
Translates to: SLLQPLASGRVTATFKSPPQVRP*FGGCVR
Trigger: TCGCACGCAGCCCCCAAATCATGGACGCACCTGTGG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAACCTATAGGGAGGTCTaGCTTCAGGCGTTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: APCPRFVATCPGVWGSGPTYREV*LQALPS
Trigger: GGAGGGCAACGCCTGAAGTCAGACCTCCCTATAGGT...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: APCPRFVATCPGVWGSGPGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCAGGTGGAGATGTGGTaGTCCCCACAGGTGCGTCCA +
Preference number: 2 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEQVEMW*SPQVRP
Trigger: TGGACGCACCTGTGGGGAGCACCACATCTCCACCTG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp TCCAGCACGATGGGCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGTGTGGCAGGTCATCTTaGACACGCTGCAGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SSTMGTEALSLVRLSTHTCGRSS*TRCRAG
Trigger: CCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACA...CGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR-3UTR CCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGC +
Preference number: 2 (lower is better)
Translates to: SLLQPLASGRVTATFKSPVGGQA*WELDVG
Trigger: GCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCAC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCCGAGTACCTCCGCTTaGCCCCAGGTGGCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGPSTSA*PQVAGH
Trigger: ATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGG...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCCGCAGGTGGAGATGTaGTGCTCCCCACAGGTGCGT +
Preference number: 2 (lower is better)
Translates to: SLLQPLASGRVTATFKSPPQVEM*CSPQVR
Trigger: ACGCACCTGTGGGGAGCACCACATCTCCACCTGCGG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACGCCCTGGGGCCTGCTaGGATGGACGGGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPRPGAC*DGREGE
Trigger: TTCTCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597073.5
3UTR-3UTR CCA 90 bp CTCGGTGTACAGGCCGTGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATGCCAGGCTCAACGCCTaGCTCGCCCTTCCTCCCGTA +
Preference number: 2 (lower is better)
Translates to: LGVQAVHLHVFQELLQHDARLNA*LALPPV
Trigger: TACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGC...ATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCACGGCCTGTACACCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR CAA 90 bp CTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTaGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: LSHGVGSAKSSLLQP*ASGRVTATFKSPWH
Trigger: GTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTC +
Preference number: 2 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEEARVR*PKCPKL
Trigger: GAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGACCCGTGAGCAGTCCTaGGTCGCTGGCTCCTATTCT +
Preference number: 2 (lower is better)
Translates to: SQICGHVSRCLGEWAKPETREQS*VAGSYS
Trigger: AGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGT...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCCTCGCCCTGGGGCCTaGTGGGATGGACGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLPRPGA*WDGREG
Trigger: TCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCGAGG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597073.5
3UTR-3UTR CCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGGAGGGCAGGCCTGGTaGGAGCTTGATGTTGGCCGT +
Preference number: 2 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLGGQAW*ELDVGR
Trigger: ACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACATACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGGGCAGGCAGTACGTTaGGGGATCCGAGTACCTCCG +
Preference number: 2 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMGQAVR*GIRVPP
Trigger: CGGAGGTACTCGGATCCCCCAACGTACTGCCTGCCC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGGGTGCGTCCATGATTTaGGGGCTGCGTGCGAGGGGG +
Preference number: 2 (lower is better)
Translates to: KSSLLQPLASGRVTATFKGASMI*GLRARG
Trigger: CCCCCTCGCACGCAGCCCCCAAATCATGGACGCACC...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGCCTCAGACGCGCAGTaGCCTAGTGGCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LLQPLASGRVTATFKSPWASDAQ*PSGFCS
Trigger: AGAGCAGAAGCCACTAGGCCACTGCGCGTCTGAGGC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GGCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAGTGGCCATGCACGCACTTCTTGTaGCAGGTCATCTTGCACACG +
Preference number: 2 (lower is better)
Translates to: GTEALSLVRLSTHTPKWPCTHFL*QVILHT
Trigger: CGTGTGCAAGATGACCTGCCACAAGAAGTGCGTGCA...TGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR-3UTR TCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCAGGTTGTCCCTGTTaGCCTATAGGGAGGTCTGAC +
Preference number: 2 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKPGCPC*PIGRSD
Trigger: GTCAGACCTCCCTATAGGTCAACAGGGACAACCTGG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCTGCACTGGCAGGTCTaGCCCGGGCGTGATGTACAC +
Preference number: 2 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKLHWQV*PGRDVH
Trigger: GTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: LLQPLASGRVTATFKSPWGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QICGHVSRCLGEWAKPERGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 2 (lower is better)
Translates to: GLVASALTAHVQVIRETGCTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGC +
Preference number: 2 (lower is better)
Translates to: KSSLLQPLASGRVTATFKVGGQA*WELDVG
Trigger: GCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCAC...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGC +
Preference number: 2 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGVGGQA*WELDVG
Trigger: GCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCAC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGGGCAGGCAGTACGTTaGGGGATCCGAGTACCTCCG +
Preference number: 2 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGGQAVR*GIRVPP
Trigger: CGGAGGTACTCGGATCCCCCAACGTACTGCCTGCCC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAGCCTCAGACGCGCAGTaGCCTAGTGGCTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPASDAQ*PSGFCS
Trigger: AGAGCAGAAGCCACTAGGCCACTGCGCGTCTGAGGC...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: APCPRFVATCPGVWGSGPTFKSP*HVRSMV
Trigger: CACCATGGACCTCACGTGCCAGGGAGACTTGAATGT...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp TGTACAGGCCGTGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACA +
Preference number: 2 (lower is better)
Translates to: CTGRASPRVPGASPARWAPRPCR*SGCLRT
Trigger: TGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGG...TGCCCATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCACGGCCTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGTGGCTCTCAGCCATTaGTCTGGCCCGAGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAVALSH*SGPRRG
Trigger: CCCCCGCCTCGGGCCAGACCAATGGCTGAGAGCCAC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 2 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGTGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 2 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLCTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 2 (lower is better)
Translates to: TWGRCPPHVTLELLILDPGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGAGGGCAGGCCTGGTaGGAGCTTGATGTTGGCCGT +
Preference number: 2 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPGGQAW*ELDVGR
Trigger: ACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCC...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGAGACTTTGTCAGCTGTaGCTCTCAGCCATTGGTCTG +
Preference number: 2 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRLCQL*LSAIGL
Trigger: CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCAGACTTTGTCAGCTGTaGCTCTCAGCCATTGGTCTG +
Preference number: 2 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLRLCQL*LSAIGL
Trigger: CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCT...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 2 (lower is better)
Translates to: PHVTLELLILDPSLRAEHGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCC +
Preference number: 2 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMTSRHS*AFDSGS
Trigger: GGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTC +
Preference number: 2 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAEARVR*PKCPKL
Trigger: GAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTTCTGGATCCTTCTCTaGGGGCCGAACACTAGCTCT +
Preference number: 2 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAFWILL*GPNTSS
Trigger: AGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGGAAGGTTCCAGCATGTaGAAAAATGCACATTGGCCA +
Preference number: 2 (lower is better)
Translates to: KSSLLQPLASGRVTATFKEGSSM*KNAHWP
Trigger: TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTC...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR TCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACCACAGGTGCGTCCATaGTTTGGGGGCTGCGTGCGA +
Preference number: 2 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTPQVRP*FGGCVR
Trigger: TCGCACGCAGCCCCCAAATCATGGACGCACCTGTGG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCCAGCATGTGCAAAAATaGACATTGGCCAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAQHVQK*TLARWL
Trigger: CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTG...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACAGGTGGAGATGTGGTaGTCCCCACAGGTGCGTCCA +
Preference number: 2 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTQVEMW*SPQVRP
Trigger: TGGACGCACCTGTGGGGAGCACCACATCTCCACCTG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR CCA 72 bp GTACACGGAATGTATCTGGTCCGGGCGGCGGGCAGGTaGCTCCCGGCGCCGCACTGGGGCAGCCGCCTCCCG +
Preference number: 3 (lower is better)
Translates to: VHGMYLVRAAGR*LPAPHWGSRLP
Trigger: CGGGAGGCGGCTGCCCCAGTGCGGCGCCGGGAGCCACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR TCA 72 bp CCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCTGGTCCGGGCGGCGGG +
Preference number: 3 (lower is better)
Translates to: PGRPALAGLPRA*CTRNVSGPGGG
Trigger: CCCGCCGCCCGGACCAGATACATTCCGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCCGAGTACCTCCGCTaGGCCCCAGGTGGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRSEYLR*APGGWP
Trigger: TGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGA...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR GCA 72 bp GGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCGGGCGTGATGTACACG +
Preference number: 3 (lower is better)
Translates to: GWPSSSRGSRAP*TGRSAPGVMYT
Trigger: CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR GCA 72 bp CAGGGCCGGCAGCCGGAGGACCCTCGCCCTGGGGCCTaGTGGGATGGACGGGAAGGAGAAAAGCAGACGCTA +
Preference number: 3 (lower is better)
Translates to: QGRQPEDPRPGA*WDGREGEKQTL
Trigger: TAGCGTCTGCTTTTCTCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCGAGGGTCCTCCGGCTGCCGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597073.5
3UTR-3UTR CAA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGGGGGCAGGCAGTACGTaGGGGGATCCGAGTACCTCC +
Preference number: 3 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGGAGST*GDPSTS
Trigger: GGAGGTACTCGGATCCCCCAACGTACTGCCTGCCCC...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
67% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR GCA 72 bp CAGGGGGCCCTTTTGAGAGACAGATGGCAGGGTTACTaGAGCTTCAGGGCCGGCAGCCGGAGGACCCTCGCC +
Preference number: 3 (lower is better)
Translates to: QGALLRDRWQGY*SFRAGSRRTLA
Trigger: GGCGAGGGTCCTCCGGCTGCCGGCCCTGAAGCTGCAGTAACCCTGCCATCTGTCTCTCAAAAGGGCCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597073.5
3UTR CCA 72 bp TTGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAGTaGCCAGGCTCAACGCCTGGCTCGCCCTTCCTCCCG +
Preference number: 3 (lower is better)
Translates to: LSLVRLSTHTPK*PGSTPGSPFLP
Trigger: CGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR TCA 72 bp GCCCATTGGCCACCCCAAGCCAACCACAGCAGGGTCTaGGCCTCAGACGCGCAGTGGCCTAGTGGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: AHWPPQANHSRV*ASDAQWPSGFC
Trigger: GCAGAAGCCACTAGGCCACTGCGCGTCTGAGGCTCAGACCCTGCTGTGGTTGGCTTGGGGTGGCCAATGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR CCA 72 bp GCTTCTCCAGCACGATGGGCACCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACACGCCGAAGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: ASPARWAPRPCR*SGCLRTRRSGQ
Trigger: CTGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 3 (lower is better)
Translates to: SLLQPLASGRVTATFKSPGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCTCCGAGTACCTCCGCTaGGCCCCAGGTGGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: LVASALTAHVQVIRETGSSEYLR*APGGWP
Trigger: TGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGA...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGGGGCAGGCAGTACGTaGGGGGATCCGAGTACCTCC +
Preference number: 3 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGGAGST*GDPSTS
Trigger: GGAGGTACTCGGATCCCCCAACGTACTGCCTGCCCC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAAGGTGCGTCCATGATTaGGGGGCTGCGTGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPRCVHD*GAACEG
Trigger: CCCCTCGCACGCAGCCCCCAAATCATGGACGCACCT...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR TCA 72 bp ACTTCAGGCGTTGCCCTCCTGACCCGTGAGCAGTCCTaGGTCGCTGGCTCCTATTCTGTCACACGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: TSGVALLTREQS*VAGSYSVTRGG
Trigger: CCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGTCAGGAGGGCAACGCCTGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 3 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCACCAGAGATCCCCAGGTaGTCCCTGTTGACCTATAGG +
Preference number: 3 (lower is better)
Translates to: APCPRFVATCPGVWGSGPPEIPR*SLLTYR
Trigger: CCTATAGGTCAACAGGGACAACCTGGGGATCTCTGG...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR TCA 72 bp GGGAGGTCTGACTTCAGGCGTTGCCCTCCTGACCCGTaGGCAGTCCTGAGTCGCTGGCTCCTATTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: GRSDFRRCPPDP*AVLSRWLLFCH
Trigger: GTGACAGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGTCAGGAGGGCAACGCCTGAAGTCAGACCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR CCA 72 bp GTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTaGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: VLSRWLLFCHTG*VVPKAASCSPW
Trigger: CCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 3 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR TCA 72 bp CCCCCGGAGACATGTGTCAGAGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTCTCATGGAGGGTCCCA +
Preference number: 3 (lower is better)
Translates to: PPETCVREARVR*PKCPKLSWRVP
Trigger: TGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR GCA 72 bp TCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTaGCCCCCGGAGACATGTGTCAGAGAGGCACGGGTC +
Preference number: 3 (lower is better)
Translates to: SSMCKNAHWPGG*PPETCVREARV
Trigger: GACCCGTGCCTCTCTGACACATGTCTCCGGGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR CCA 72 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTGCCCCTGACTCATGTC +
Preference number: 3 (lower is better)
Translates to: ASGRVTATFKSP*HVRSMVPLTHV
Trigger: GACATGAGTCAGGGGCACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp GTGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTTGTCGCTGGTCAGTTGTGCACGCACTTCTaGTGGCAGGTCATCTTGCAC +
Preference number: 3 (lower is better)
Translates to: VFQELLQHDGHRGLVAGQLCTHF*WQVILH
Trigger: GTGCAAGATGACCTGCCACAAGAAGTGCGTGCACAA...CTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
3UTR-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLSDMQT*SAVALS
Trigger: GCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGA...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR TCA 72 bp CTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGA +
Preference number: 3 (lower is better)
Translates to: LHLGPVPTSRHS*AFDSGSFSEGR
Trigger: TCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHSDMQT*SAVALS
Trigger: GCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR-3UTR CAA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAAGGTGCGTCCATGATTaGGGGGCTGCGTGCGAGGGG +
Preference number: 3 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKRCVHD*GAACEG
Trigger: CCCCTCGCACGCAGCCCCCAAATCATGGACGCACCT...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGATTTGGGGGCTGCGTaGGAGGGGGCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQDLGAA*EGAWLQ
Trigger: CTGGAGCCAGGCCCCCTCGCACGCAGCCCCCAAATC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGCGTAGGAGCTGTCACTaGCCCGCAGCAGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQRRSCH*PAAGPR
Trigger: TCGTGGCCCTGCTGCGGGGCAGTGACAGCTCCTACG...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGTGGAGACGTCGCTCGTaGAGAAGGAGGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQWRRRS*RRRCAS
Trigger: AGAGGCGCACCTCCTTCTCCACGAGCGACGTCTCCA...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGTTCTCACCTGCAGCGTaGCGATGCTGCTGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQFSPAA*RCCCPE
Trigger: CTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAA...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCCTCGTCCGAGCCCCTTaGGTCCAGCTCCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPLVRAP*VQLRQP
Trigger: CGGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAG...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGCCTCAGACGCGCAGTaGCCTAGTGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQASDAQ*PSGFCS
Trigger: AGAGCAGAAGCCACTAGGCCACTGCGCGTCTGAGGC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CAA 72 bp GCGAGGGGGCCTGGCTCCAGCCGGCCTCTCCCTGCCTaGACTCTGCACTTGGGGCCGGTGCCCACCTCACGT +
Preference number: 4 (lower is better)
Translates to: ARGPGSSRPLPA*TLHLGPVPTSR
Trigger: ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGGCCCCCTCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGCAGGAAGCGGTGCTTaGGGTTCTTCAGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQAGSGA*GSSGGC
Trigger: GCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGGAAGTTCTCCAGCTTaGCTGCTGCGGGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQGSSPA*LLRGLS
Trigger: AGACAGACCCCGCAGCAGTCAAGCTGGAGAACTTCC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGGCTGCGGGGTCTGTCTaGAGCGCCTGCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRAAGSV*SACRSS
Trigger: GGAGCTCCGGCAGGCGCTGCAGACAGACCCCGCAGC...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGCCTGGAACGTGTACTTaGCGCTGTACCCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQPGTCT*RCTLTS
Trigger: GGAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGG...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCTGTCCAGGGCCAGGCTaGTCGGCCGCTCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPCPGPG*SAAPTG
Trigger: GCCAGTTGGAGCGGCCGACCAGCCTGGCCCTGGACA...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGGTGGCTCTCAGCCATTaGTCTGGCCCGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTVALSH*SGPRRG
Trigger: CCCCCGCCTCGGGCCAGACCAATGGCTGAGAGCCAC...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGCTCATTGGCGTTGGTaGTCTGGCGGAACACCGATT +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQAHWRW*SGGTPI
Trigger: AATCGGTGTTCCGCCAGATCACCAACGCCAATGAGC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCCAGGCGTTGCCCTCCTaGCCCGTGAGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPQALPS*PVSSPE
Trigger: CTCAGGACTGCTCACGGGTCAGGAGGGCAACGCCTG...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGCCTGCGCCACCAGCTaGATATGCACGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQACATS*ICTYLM
Trigger: CATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGCACCTCAGGCTCCGATaGCAGGTGCCCGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTHLRLR*QVPAIL
Trigger: GAGGATGGCGGGCACCTGGCATCGGAGCCTGAGGTG...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCCTGCAGCGTGGCGATaGTGCTGTCCGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPPAAWR*CCPEGA
Trigger: AGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCTCATCGCCGCCGGCTaGCTCCTCCTCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLIAAG*LLLQQH
Trigger: GTGCTGCTGGAGGAGGAGGCAGCCGGCGGCGATGAG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGGGCCAGCACCCAGGATaGTCCTCTCGACGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGGQHPG*SSRRRW
Trigger: CCAGCGGCGTCGAGAGGACCATCCTGGGTGCTGGCC...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCTCGTCCGAGCCCCTTaGGTCCAGCTCCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRLVRAP*VQLRQP
Trigger: CGGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAG...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGTGCCCTCCAGCCGCCTaGCCCTGTCCGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGCPPAA*PCPPSS
Trigger: TGAGGAGGGCGGACAGGGTCAGGCGGCTGGAGGGCA...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGGGGAGTGGGGAGATGTaGGGCCGCAGGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTGSGEM*GRRWRC
Trigger: ACATCTCCACCTGCGGCCTCACATCTCCCCACTCCC...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGAGGTACACGGCAGCCTaGGTCCTCTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRRYTAA*VLSSAL
Trigger: GAGGGCGCTGGAGAGGACGCAGGCTGCCGTGTACCT...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGAGGTACCGCTGGATCTaGGTGGAGCCTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGRYRWI*VEPPGL
Trigger: CAGCCCCGGAGGCTCCACGCAGATCCAGCGGTACCT...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGCTCCCGGGCACCCGGTaGCCAGCGAGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAALPGTR*PARQVG
Trigger: TCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAG...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGATCCTGCCGGCCGCCTaGCTTCAGCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPILPAA*LQHASQ
Trigger: CTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGAT...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGTGGTGCTGTCCTTGGTaGCAGTCACGCGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTWCCPW*QSRGTR
Trigger: CCTCGTGCCGCGTGACTGCCACCAAGGACAGCACCA...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGGCGCCGGGTGGCTGTaGCCTGCGCCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPGAGWL*PAPPAA
Trigger: TGCAGCTGGTGGCGCAGGCCACAGCCACCCGGCGCC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGTCCGCCTGCTGCCGTaGCAGGAGGCCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGVRLLP*QEATLH
Trigger: GTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGAC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGCCTGGGGTTGCTCTGTaGGCTGCTTTTGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQPGVAL*AAFEMC
Trigger: ACACATCTCAAAAGCAGCCCACAGAGCAACCCCAGG...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGACGCACACGCCGAAGTaGCCAGGCTCAACGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGTHTPK*PGSTPG
Trigger: GCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGT...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGCTCCCGAGTGCGGTTaGCAGCACCCGACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALAAPECG*QHPTCG
Trigger: ACCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGC...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGGCAGGCTCTCGGTGCTaGCCGACGTCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRAGSRC*PTSPSP
Trigger: TGGACTCGGAGACGTCGGCCAGCACCGAGAGCCTGC...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGTGCGTCCATGATTTaGGGGCTGCGTGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALAGASMI*GLRARG
Trigger: CCCCCTCGCACGCAGCCCCCAAATCATGGACGCACC...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAACCACAGCAGGGTCTaGGCCTCAGACGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALANHSRV*ASDAQW
Trigger: CCACTGCGCGTCTGAGGCTCAGACCCTGCTGTGGTT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGGGTCCATGGTGCCCCTaGCTCATGTCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPGPWCP*LMSWLQ
Trigger: CTGGAGCCAGGACATGAGTCAGGGGCACCATGGACC...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGGGTCCATGGTGCCCCTaGCTCATGTCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRGPWCP*LMSWLQ
Trigger: CTGGAGCCAGGACATGAGTCAGGGGCACCATGGACC...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCGGGGGTCCTCGCCCTaGCAGGGCAATCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGRGSSP*QGNPLM
Trigger: CATCAAAGGATTGCCCTGGCAGGGCGAGGACCCCCG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGGCTGGCTCCGGCCCCTaGTCAGCTACCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAAGSGP*SATCCP
Trigger: AGGGCAGCAGGTAGCTGAGCAGGGGCCGGAGCCAGC...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTAGGTACCGCTGGATCTaGGTGGAGCCTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRRYRWI*VEPPGL
Trigger: CAGCCCCGGAGGCTCCACGCAGATCCAGCGGTACCT...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGCAGCGTGGCGATGCTaGTGTCCGGAGGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGAAWRC*CPEGAS
Trigger: GGAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGCCTCGCCCTGGGGCCTaGTGGGATGGACGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAPRPGA*WDGREG
Trigger: TCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCGAGG...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCACCACTAGGCGCCGGGTaGCTGTGGCCTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPPLGAG*LWPAPP
Trigger: TGGTGGCGCAGGCCACAGCCACCCGGCGCCTAGTGG...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGTCCGCCTGCTGCCGTaGCAGGAGGCCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPVRLLP*QEATLH
Trigger: GTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGAC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGAAGGCGCGGGGTTTCTaGAGCCGACTGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPKARGF*SRLRDW
Trigger: CCAGTCCCTCAGTCGGCTCCAGAAACCCCGCGCCTT...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCCAACTGCCATGGCCTaGGGTTGCTCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGPTAMA*GCSVGC
Trigger: GCAGCCCACAGAGCAACCCCAGGCCATGGCAGTTGG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGTGTCCAGGGCCAGGCTaGTCGGCCGCTCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGCPGPG*SAAPTG
Trigger: GCCAGTTGGAGCGGCCGACCAGCCTGGCCCTGGACA...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCACCGCTGGATCTGCGTaGAGCCTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAITAGSA*SLRGCR
Trigger: CCGACAGCCCCGGAGGCTCCACGCAGATCCAGCGGT...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGTCATCTAGCAGTGACTaGAAGAGGTTGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQSSSSD*KRLRTR
Trigger: CCTGGTCCTCAACCTCTTCCAGTCACTGCTAGATGA...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCCGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACRRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGGGAGGGCAGGCCTGGTaGGAGCTTGATGTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGGGQAW*ELDVGR
Trigger: ACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCC...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCAGGGCGCCCTGCACTaGCAGGTCTGCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKQGALH*QVCPGR
Trigger: ACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCCGCAGGTGGAGATGTaGTGCTCCCCACAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPPQVEM*CSPQVR
Trigger: ACGCACCTGTGGGGAGCACCACATCTCCACCTGCGG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCTTGGCGCTGTACCCTaGCCTCCGGATGCGCACGGT +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAILGAVP*PPDAHG
Trigger: ACCGTGCGCATCCGGAGGTCAGGGTACAGCGCCAAG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTGCCCTCCAGCCGCCTaGCCCTGTCCGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQCPPAA*PCPPSS
Trigger: TGAGGAGGGCGGACAGGGTCAGGCGGCTGGAGGGCA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGACTGTGCGAAGGTCATaGGGGGCTCGGGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGATVRRS*GARAAP
Trigger: GGGAGCTGCCCGAGCCCCTCATGACCTTCGCACAGT...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGCAGGTGACATGCGGTTaGCATCCTCGAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRQVTCG*HPRAGP
Trigger: TGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTG...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCTGCCCTCCTGACCCGTaGGCAGTCCTGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAICPPDP*AVLSRW
Trigger: CCAGCGACTCAGGACTGCTCACGGGTCAGGAGGGCA...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCCGCCTGGCTTCAGCATaGCTCCCAGGCTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACRLASA*LPGSGR
Trigger: GCGCCCCGAGCCTGGGAGGCATGCTGAAGCCAGGCG...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCGCCTGGCTTCAGCATaGCTCCCAGGCTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKRLASA*LPGSGR
Trigger: GCGCCCCGAGCCTGGGAGGCATGCTGAAGCCAGGCG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCGCACATAACATTTGGTaGCGTCCAGCCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPAHNIW*RPAAGW
Trigger: CCAGCCTGCGGCTGGACGGCACCAAATGTTATGTGC...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGCGGTGCAGCGTCTCCTaGAGGGCTTGCCGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAARCSVS*RACRSV
Trigger: GACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCG...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGTTCTCTTCTGCCTTCTaGTTCTCCGAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQFSSAF*FSEIIW
Trigger: CCAGATGATCTCGGAGAAGCAGAAGGCAGAAGAGAA...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGTCCGTCCGTGGTTTCTaGTGCAGGCTGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPSVRGF*CRLSLG
Trigger: GCCAAGGCTCAGCCTGCAGCAGAAACCACGGACGGA...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCGTCTGGGAGGGAGGATaGGTCGCCTGGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPVWEGG*VAWLLL
Trigger: AAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGAC...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTGCCCGGGGACAGCCCTaGGTCTGGGAGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAARGQP*VWEGGC
Trigger: GCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGC...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCACGTGCCCGGACACTaGATTCTCCAGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGHVPGH*ILQLLC
Trigger: GCAGAGGAGCTGGAGAATGCAGTGTCCGGGCACGTG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTTGGCAGCACCCGACTTaGGGTAGAGGCCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRWQHPT*GRGPRC
Trigger: ACACCGAGGGCCTCTACCGCAAGTCGGGTGCTGCCA...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTGCGCAGGAGGCAGGGTaGGAAGATAATGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRAQEAG*EDNGQR
Trigger: GCGCTGGCCATTATCTTCGCACCCTGCCTCCTGCGC...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCTCCCGGGCACCCGGTaGCCAGCGAGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWLPGTR*PARQVG
Trigger: TCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCGGCGCCCAGCTCCAGTaGAGGGGCCGTCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACGAQLQ*RGRPRT
Trigger: TGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCC...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGATTTGGGGGCTGCGTaGGAGGGGGCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPDLGAA*EGAWLQ
Trigger: CTGGAGCCAGGCCCCCTCGCACGCAGCCCCCAAATC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALAGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCACCTGGCTCTCGGTGGTaGACAGCTGGGGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALAPGSRW*TAGGRC
Trigger: ACATCTACCCCCAGCTGTCCACCACCGAGAGCCAGG...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGAGGAAGTTGGTGCTCTaGGTCTTGCCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPRKLVL*VLPEPL
Trigger: GAGCGGCTCCGGCAAGACCCAGAGCACCAACTTCCT...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGGTCCAGCACCTCGGGTaGCCCGACCTCCAACCCTTC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAVQHLG*PDLQPF
Trigger: GAAGGGTTGGAGGTCGGGCCACCCGAGGTGCTGGAC...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCTGTCCAGGACCCCAATaGACAGGCACGAGACTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPCPGPQ*TGTRLP
Trigger: AGGCAGTCTCGTGCCTGTCCATTGGGGTCCTGGACA...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGACCGCCAGCAGGCCTaGATGGTGACGGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPDRQQA*MVTAAR
Trigger: GCGGGCCGCCGTCACCATCCAGGCCTGCTGGCGGTC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCTGGGAGAGTCTTCTCTaGGCTTGGGGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPWESLL*AWGLLL
Trigger: GAGAAGGAGGCCCCAAGCCCAGAGAAGACTCTCCCA...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGGCCTGGGGCTCCCACTaGGCAGCGTCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRAWGSH*AASSQF
Trigger: AAACTGAGAAGACGCTGCCCAGTGGGAGCCCCAGGC...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGGCGTCCAGGTACCGCTaGATCTGCGTGGAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGASRYR*ICVEPP
Trigger: CGGAGGCTCCACGCAGATCCAGCGGTACCTGGACGC...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTGCTTCTCCAGCACGATaGGCACCGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRASPAR*APRPCR
Trigger: GCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGC...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGCGGGGTCCATGCCGATaGGCTCCCGCACGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQRGPCR*APARRS
Trigger: GCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCG...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCATCTCCTCTGTGGGCGTaGGGGCGGCCCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPSPLWA*GRPLWP
Trigger: GGGCCACAGGGGCCGCCCTCACGCCCACAGAGGAGA...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGTCCTCATCTGCTCCTTaGTCAGCATCTCCACGCACG +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTSSSAP*SASPRT
Trigger: CGTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGA...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGREARVR*PKCPKL
Trigger: GAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTC...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGGTCCATGGTGCCCCTaGCTCATGTCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGGPWCP*LMSWLQ
Trigger: CTGGAGCCAGGACATGAGTCAGGGGCACCATGGACC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCTGGCGTCCGGAAGAGTaGCAGCCACATTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPWRPEE*QPHSSL
Trigger: GAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCA...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAACCTATAGGGAGGTCTaGCTTCAGGCGTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALATYREV*LQALPS
Trigger: GGAGGGCAACGCCTGAAGTCAGACCTCCCTATAGGT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGGTAGGGACTTGGTGGTaGGGTCGTGCAGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPVGTWW*GRAESC
Trigger: GCATGACTCTGCACGACCGCACCACCAAGTCCCTAC...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGCGGCCCGCTTCATCTaGAGGAAGTGCCGACGCTCC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPAARFI*RKCRRS
Trigger: GGAGCGTCGGCACTTCCTGCAGATGAAGCGGGCCGC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGAGGTACACGGCAGCCTaGGTCCTCTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAARYTAA*VLSSAL
Trigger: GAGGGCGCTGGAGAGGACGCAGGCTGCCGTGTACCT...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTTGCTCCAGCCCTCTTTaGCGACGCGACTCACGCTTC +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRCSSPL*RRDSRF
Trigger: GAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCA...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAGAGACCTTGCCAACTaGCATGGCCTGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALARDLAN*HGLGLL
Trigger: GAGCAACCCCAGGCCATGGCAGTTGGCAAGGTCTCT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAGCCCGGGGACAGCCCTaGGTCTGGGAGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERARGQP*VWEGGC
Trigger: GCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGC...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCGCGCAGGAGGCAGGGTaGGAAGATAATGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIAQEAG*EDNGQR
Trigger: GCGCTGGCCATTATCTTCGCACCCTGCCTCCTGCGC...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGGCAGGAGCGAAAGCCTaGGGAAGGCGATACTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPAGAKA*GRRYSL
Trigger: CAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGC...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCTCCCGGGCACCCGGTaGCCAGCGAGGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGLPGTR*PARQVG
Trigger: TCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAG...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCAGGTGGAGATGTGGTaGTCCCCACAGGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRQVEMW*SPQVRP
Trigger: TGGACGCACCTGTGGGGAGCACCACATCTCCACCTG...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCATTGGCCAGGTGGCTaGCCCCCGGAGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGHWPGG*PPETCV
Trigger: GACACATGTCTCCGGGGGGCAGCCACCTGGCCAATG...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGGTGGTGCTGTCCTTaGTGGCAGTCACGCGGCACG +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGRWCCP*WQSRGT
Trigger: CGTGCCGCGTGACTGCCACCAAGGACAGCACCACCT...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCAGCGCGAAGACGTGTaGCTCCAGCTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGQREDV*LQLAQL
Trigger: CAGCTGGGCAAGCTGGAGCCACACGTCTTCGCGCTG...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGAAGGCGCGGGGTTTCTaGAGCCGACTGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAKARGF*SRLRDW
Trigger: CCAGTCCCTCAGTCGGCTCCAGAAACCCCGCGCCTT...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGCAGTAGGGACTTGGTaGTGCGGTCGTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALAAVGTW*CGRAES
Trigger: TGACTCTGCACGACCGCACCACCAAGTCCCTACTGC...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAGGGATGTCTGGAACTaGGCGCTGATGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALARDVWN*ALMLGG
Trigger: GCCACCAAGCATCAGCGCCCAGTTCCAGACATCCCT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCCTGGAACGTGTACTTaGCGCTGTACCCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGPGTCT*RCTLTS
Trigger: GGAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCGGACAGCCCTGCGTCTaGGAGGGAGGATGCGTCGCC +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACGQPCV*EGGCVA
Trigger: GGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCC...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGTGCCTCCTGGTTCCTTaGTGCGCTTCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGCLLVP*CASHLQ
Trigger: CTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCA...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGASSSSS*MSRVLG
Trigger: CCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCCTCGTCCGAGCCCCTTaGGTCCAGCTCCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFLVRAP*VQLRQP
Trigger: CGGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAG...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGGGGCAGGCAGTACGTTaGGGGATCCGAGTACCTCCG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAGQAVR*GIRVPP
Trigger: CGGAGGTACTCGGATCCCCCAACGTACTGCCTGCCC...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGTGGCTCTCAGCCATTaGTCTGGCCCGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKVALSH*SGPRRG
Trigger: CCCCCGCCTCGGGCCAGACCAATGGCTGAGAGCCAC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCGATGTTGTGCCACGTaGTCCCCTCGCCCTGATATT +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGRCCAT*SPRPDI
Trigger: AATATCAGGGCGAGGGGATCACGTGGCACAACATCG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCCGGGGTCCATGCCGATaGGCTCCCGCACGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFRGPCR*APARRS
Trigger: GCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCG...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTAGCAGGCCTGGATGGTaGCGGCGGCCCGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVASRPGW*RRPASS
Trigger: AGATGAAGCGGGCCGCCGTCACCATCCAGGCCTGCT...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGACTGTGCGAAGGTCATaGGGGGCTCGGGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQTVRRS*GARAAP
Trigger: GGGAGCTGCCCGAGCCCCTCATGACCTTCGCACAGT...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTGCCCTCCTGACCCGTaGGCAGTCCTGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQCPPDP*AVLSRW
Trigger: CCAGCGACTCAGGACTGCTCACGGGTCAGGAGGGCA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGCCTCCCGAAGCACTaGCATGGCCCGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQGLPKH*HGPDSS
Trigger: GCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGTTGGTGGTGCGGTCGTaGAGAGTCATGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTLVVRS*RVMLMM
Trigger: CATCATCAGCATGACTCTGCACGACCGCACCACCAA...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCGGTGCAGCGTCTCCTaGAGGGCTTGCCGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPARCSVS*RACRSV
Trigger: GACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTAGGTACACGGCAGCCTaGGTCCTCTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVARYTAA*VLSSAL
Trigger: GAGGGCGCTGGAGAGGACGCAGGCTGCCGTGTACCT...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGCTGAAGCTCTTGCGCTaGAGGTGCCCCCGACACAGG +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAALKLLR*RCPRHR
Trigger: CCTGTGTCGGGGGCACCTGCAGCGCAAGAGCTTCAG...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGGCTCCGATGCCAGGTaGCCGCCATCCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGGSDAR*PPSSAG
Trigger: GCCAGCGGAGGATGGCGGGCACCTGGCATCGGAGCC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGTTCTGGAACTTGACGTaGTCCAGCCCTCTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTFWNLT*SSPLCR
Trigger: TCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAA...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCGGCCACCAGCTTCTTaGCCCGCCACAGTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKRPPAS*PATVPR
Trigger: CCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCGGCCACCAGCTTCTTaGCCCGCCACAGTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVARPPAS*PATVPR
Trigger: CCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCG...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTCGTGGAGAAGGAGGTaGGCCTCTCCTCTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAASWRRR*ASPLWA
Trigger: CGCCCACAGAGGAGAGGCGCACCTCCTTCTCCACGA...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGAACACGTGCCCGTTGTaGTCCTGGACAGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGNTCPL*SWTARS
Trigger: GGAGCGTGCTGTCCAGGAGCACAACGGGCACGTGTT...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCCAGCACGATGGGCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGTGGCAGCACCCGACTTaGGGTAGAGGCCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: SSTMGTEALSLVRLSTHTWQHPT*GRGPRC
Trigger: ACACCGAGGGCCTCTACCGCAAGTCGGGTGCTGCCA...CGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGATCTGTCTGCAGCGCCTaGCGGAGCTCCCGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERSVCSA*RSSRVR
Trigger: CCGCACTCGGGAGCTCCGGCAGGCGCTGCAGACAGA...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGCTGCGGGGTCTGTCTaGAGCGCCTGCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLAAGSV*SACRSS
Trigger: GGAGCTCCGGCAGGCGCTGCAGACAGACCCCGCAGC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCAGCTCCCGCAGCCACTaGTTCAGCACCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAISSRSH*FSTPVM
Trigger: CATCACAGGGGTGCTGAAGCAGTGGCTGCGGGAGCT...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGGCTCCAGGGCGCCCTaGACTGGCAGGTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSGSRAP*TGRSAP
Trigger: CGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCGGCGCCCAGCTCCAGTaGAGGGGCCGTCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGGAQLQ*RGRPRT
Trigger: TGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCC...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGCAGCCGGCCTCTCCCTaGCTTGACTCTGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAQPASP*LDSALG
Trigger: CCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTG...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGCAGGTGGAGATGTGGTaGTCCCCACAGGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGQVEMW*SPQVRP
Trigger: TGGACGCACCTGTGGGGAGCACCACATCTCCACCTG...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCGAGAGAGGAGGGCCCTaGTCCAGAGATCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIERGGP*SRDPQV
Trigger: AACCTGGGGATCTCTGGAGCAGGGCCCTCCTCTCTC...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGATCCTGCCGGCCGCCTaGCTTCAGCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEILPAA*LQHASQ
Trigger: CTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGAT...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCACGCGGCACGAGGCCTaGCTCTCGGTGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFTRHEA*LSVVDS
Trigger: GCTGTCCACCACCGAGAGCCAGGCCTCGTGCCGCGT...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGGCGCCGGGTGGCTGTaGCCTGCGCCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHGAGWL*PAPPAA
Trigger: TGCAGCTGGTGGCGCAGGCCACAGCCACCCGGCGCC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACCACTAGGCGCCGGGTaGCTGTGGCCTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPPLGAG*LWPAPP
Trigger: TGGTGGCGCAGGCCACAGCCACCCGGCGCCTAGTGG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGAAATCTGCTTCTTGGTaGCGGGGAGGAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPKSASW*RGGSPP
Trigger: TGGTGGGCTTCCTCCCCGCCACCAAGAAGCAGATTT...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCAGGGCCACGATGTCTaGCCGCATGTAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPQGHDV*PHVVHV
Trigger: AACATGGACTACATGCGGCCAGACATCGTGGCCCTG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGTTGGGCAGGAGCACCTaGAACTGCTCGGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLGRST*NCSVKS
Trigger: GGATTTCACCGAGCAGTTCCAGGTGCTCCTGCCCAA...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGGACCGCCAGCAGGCCTaGATGGTGACGGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKDRQQA*MVTAAR
Trigger: GCGGGCCGCCGTCACCATCCAGGCCTGCTGGCGGTC...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGACCGCCAGCAGGCCTaGATGGTGACGGCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPDRQQA*MVTAAR
Trigger: GCGGGCCGCCGTCACCATCCAGGCCTGCTGGCGGTC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGGCTTCTCCCGGCTGCTaGGGACTTTCTCGTGACTTT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPASPGC*GLSRDF
Trigger: AAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGC...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTACCGCTGGATCTGCGTaGAGCCTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPATAGSA*SLRGCR
Trigger: CCGACAGCCCCGGAGGCTCCACGCAGATCCAGCGGT...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAACAGTTCCACGGCGCTaGCCAGCCGCTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTTVPRR*PAARRP
Trigger: TGGACGCCGAGCGGCTGGCCAGCGCCGTGGAACTGT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTTCTCACCTGCAGCGTaGCGATGCTGCTGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAFSPAA*RCCCPE
Trigger: CTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTTGCCTCCTGGTTCCTTaGTGCGCTTCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRCLLVP*CASHLQ
Trigger: CTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCA...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCTCCCGAGTGCGGTTGGCAGCACCCGACTTGCGGTAGAGGCCCTCGGTGTACACCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACA +
Preference number: 4 (lower is better)
Translates to: APECGWQHPTCGRGPRCTPRPCR*SGCLRT
Trigger: TGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGG...TGTACACCGAGGGCCTCTACCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCCAGGACGGCATAGATaGCAGCCAGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIPGRHR*QPAAPA
Trigger: AGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPSSSSS*MSRVLG
Trigger: CCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPRRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCAGGGCGCCCTGCACTaGCAGGTCTGCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILQGALH*QVCPGR
Trigger: ACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGGGCAGGCAGTACGTTaGGGGATCCGAGTACCTCCG +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAGQAVR*GIRVPP
Trigger: CGGAGGTACTCGGATCCCCCAACGTACTGCCTGCCC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGGCAGTCCTGAGTCGCTaGCTCCTATTCTGTCACACG +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRAVLSR*LLFCHT
Trigger: CGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CAA 72 bp GCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: APVQGPSSDMQT*SAVALSHWSGP
Trigger: CGGGCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
3UTR CAA 72 bp TCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTaGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SRSFSSTMGTEA*SLVRLSTHTPK
Trigger: CTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR TCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGCGCCTCCCGACTCTTTaGCCTCCACCAGCACATAAC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGARLPTL*PPPAHN
Trigger: GTTATGTGCTGGTGGAGGTCAAAGAGTCGGGAGGCG...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGGAACTGGGCGCTaGTGCTTGGTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRSGTGR*CLVAFS
Trigger: AGAAAAAGCCACCAAGCATCAGCGCCCAGTTCCAGA...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCTCTCCTCTGTGGGCGTaGGGGCGGCCCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLSPLWA*GRPLWP
Trigger: GGGCCACAGGGGCCGCCCTCACGCCCACAGAGGAGA...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCGTTTCTGCTGCAGGCTaGGCCTTGGCCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFVSAAG*ALARDG
Trigger: CCCGTCCCTGGCCAAGGCTCAGCCTGCAGCAGAAAC...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGGCCAGCGCCCCAGGTaGCATGCGGTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWGQRPR*HAVDIL
Trigger: GAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGTTCTGGATCCTTCTCTaGGGGCCGAACACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRFWILL*GPNTSS
Trigger: AGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAA...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGGGAGTGGGGAGATGTaGGGCCGCAGGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEGSGEM*GRRWRC
Trigger: ACATCTCCACCTGCGGCCTCACATCTCCCCACTCCC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGACCTATAGGGAGGTCTaGCTTCAGGCGTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGTYREV*LQALPS
Trigger: GGAGGGCAACGCCTGAAGTCAGACCTCCCTATAGGT...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCATAGCAGCACCCGGTaGACAGGCGAGTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAHSSTR*TGESLA
Trigger: CGCCAACGACTCGCCTGTGCACCGGGTGCTGCTATG...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTCAAAGTCCGCCTGCTaGCGTGGCAGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPSKSAC*RGRRPR
Trigger: GCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGA...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACATGGTGCTCTGGGTCTTaGCGGAGCCGCTCTCACCCG +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTWCSGS*RSRSHP
Trigger: CGGGTGAGAGCGGCTCCGGCAAGACCCAGAGCACCA...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGAGCCTCTCAAAGTCATaGTTCAGGTCCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTSLSKS*FRSSPS
Trigger: AGATGGGGAGGACCTGAAGCATGACTTTGAGAGGCT...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGGTAGGGACTTGGTGGTaGGGTCGTGCAGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAVGTWW*GRAESC
Trigger: GCATGACTCTGCACGACCGCACCACCAAGTCCCTAC...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCTCCGCCTTCCCCAGTaGCTCCAAGAGCTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRLRLPQ*LQELVK
Trigger: CTTAACAAGCTCTTGGAGGCACTGGGGAAGGCGGAG...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACGCACCACCTCCCGGTaGAGCGTCTCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPRTTSR*SVSCRA
Trigger: AGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCGCTGGCTCCGGCCCCTaGTCAGCTACCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGAGSGP*SATCCP
Trigger: AGGGCAGCAGGTAGCTGAGCAGGGGCCGGAGCCAGC...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGCTGGCTCCGGCCCCTaGTCAGCTACCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLAGSGP*SATCCP
Trigger: AGGGCAGCAGGTAGCTGAGCAGGGGCCGGAGCCAGC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGGCTCCGATGCCAGGTaGCCGCCATCCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYGSDAR*PPSSAG
Trigger: GCCAGCGGAGGATGGCGGGCACCTGGCATCGGAGCC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACACCTCAGGCTCCGATaGCAGGTGCCCGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTHLRLR*QVPAIL
Trigger: GAGGATGGCGGGCACCTGGCATCGGAGCCTGAGGTG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGACACCTCAGGCTCCGATaGCAGGTGCCCGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERHLRLR*QVPAIL
Trigger: GAGGATGGCGGGCACCTGGCATCGGAGCCTGAGGTG...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGTTCTGGAACTTGACGTaGTCCAGCCCTCTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPFWNLT*SSPLCR
Trigger: TCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAA...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCCTGAACCCTTGGGCTaGCACATGGTTTGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPPEPLG*HMVCSC
Trigger: ACAAGAGCAAACCATGTGGCAGCCCAAGGGTTCAGG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCCGGCCACCAGCTTCTTaGCCCGCCACAGTTCCACGG +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFRPPAS*PATVPR
Trigger: CCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCG...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGCCCGGGGACAGCCCTaGGTCTGGGAGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSARGQP*VWEGGC
Trigger: GCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCCTGCAGCGTGGCGATaGTGCTGTCCGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGPAAWR*CCPEGA
Trigger: AGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTGTGGCAGGTCATCTTaGACACGCTGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGACGRSS*TRCRAG
Trigger: CCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTGTGGCAGGTCATCTTaGACACGCTGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGCGRSS*TRCRAG
Trigger: CCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAGTGGCCAGTGTGGCAGGTCATCTTaGACACGCTGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: APRPCRWSGCLRTRRSGQCGRSS*TRCRAG
Trigger: CCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACA...CTGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTCGGTGTACAGGCCGTaGATCTCCACGTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGSVYRP*ISTCSR
Trigger: CCTGGAACACGTGGAGATGCACGGCCTGTACACCGA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGCAGCCAGCTGCTCCTaGTTCTCCGGCAGCTCGACG +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPAASCS*FSGSST
Trigger: CGTCGAGCTGCCGGAGAAGCAGGAGCAGCTGGCTGC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGGCGCCCAGCTCCAGTaGAGGGGCCGTCCTCGGACA +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSGAQLQ*RGRPRT
Trigger: TGTCCGAGGACGGCCCCTGCACTGGAGCTGGGCGCC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGATTTGGGGGCTGCGTaGGAGGGGGCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQDLGAA*EGAWLQ
Trigger: CTGGAGCCAGGCCCCCTCGCACGCAGCCCCCAAATC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGAGAGAGGAGGGCCCTaGTCCAGAGATCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAERGGP*SRDPQV
Trigger: AACCTGGGGATCTCTGGAGCAGGGCCCTCCTCTCTC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGGCCTGGCTCTCGGTaGTGGACAGCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPERPGSR*WTAGGR
Trigger: TCTACCCCCAGCTGTCCACCACCGAGAGCCAGGCCT...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCAGCACATAACATTTaGTGCCGTCCAGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGPAHNI*CRPAAG
Trigger: GCCTGCGGCTGGACGGCACCAAATGTTATGTGCTGG...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGTCCGCCTGCTGCCGTaGCAGGAGGCCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSVRLLP*QEATLH
Trigger: GTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGAC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCGTCCAGCACCTCGGGTaGCCCGACCTCCAACCCTTC +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFVQHLG*PDLQPF
Trigger: GAAGGGTTGGAGGTCGGGCCACCCGAGGTGCTGGAC...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTTTGGCCAGCAGGGTCTaGCTCGTGGCGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPALASRV*LVAWGK
Trigger: CTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAA...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGCCTGGAACGTGTACTTaGCGCTGTACCCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGPGTCT*RCTLTS
Trigger: GGAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGG...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCCCTCCATGAGGCCTaGAGGTACACGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAPLHEA*RYTAAC
Trigger: GCAGGCTGCCGTGTACCTCCAGGCCTCATGGAGGGG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGCCGCCACGGTTTTCTaGGGTGGGAGAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGAATVF*GGRVFS
Trigger: AGAGAAGACTCTCCCACCCCAGAAAACCGTGGCGGC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCATGTCCAGGGCCAGGCTaGTCGGCCGCTCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPCPGPG*SAAPTG
Trigger: GCCAGTTGGAGCGGCCGACCAGCCTGGCCCTGGACA...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGACCGCTGGATCTGCGTaGAGCCTCCGGGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWTAGSA*SLRGCR
Trigger: CCGACAGCCCCGGAGGCTCCACGCAGATCCAGCGGT...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGGGACAGCCCTGCGTCTaGGAGGGAGGATGCGTCGCC +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWGQPCV*EGGCVA
Trigger: GGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCC...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCCTTCTTCATGGTGGTaGCTTCCAGCACCACGTGCC +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIPSSWW*LPAPRA
Trigger: GGCACGTGGTGCTGGAAGCCACCACCATGAAGAAGG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCATGCACGCACTTCTTGTaGCAGGTCATCTTGCACACG +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALACTHFL*QVILHT
Trigger: CGTGTGCAAGATGACCTGCCACAAGAAGTGCGTGCA...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CGCACACGCCGAAGTGGCCAGGCTCAACGCCTGGCTCGCCCTTCCTCCCGTAGGTGCACGCACTTCTTGTaGCAGGTCATCTTGCACACG +
Preference number: 4 (lower is better)
Translates to: RTRRSGQAQRLARPSSRRCTHFL*QVILHT
Trigger: CGTGTGCAAGATGACCTGCCACAAGAAGTGCGTGCA...CCTACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGGCCACCTTGACAAGGTaGAAGATGAGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGATLTR*KMSLSR
Trigger: CCTGGAGAGACTCATCTTCCACCTTGTCAAGGTGGC...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGCAGTTTGAGAGGCCATaGAGCATTTTGTCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTQFERP*SILSQE
Trigger: CTCCTGCGACAAAATGCTCCATGGCCTCTCAAACTG...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVASSSSS*MSRVLG
Trigger: CCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTCGTCCGAGCCCCTTaGGTCCAGCTCCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLVRAP*VQLRQP
Trigger: CGGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLRRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCGCAGGTGGAGATGTaGTGCTCCCCACAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKPQVEM*CSPQVR
Trigger: ACGCACCTGTGGGGAGCACCACATCTCCACCTGCGG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCCGCAGGTGGAGATGTaGTGCTCCCCACAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEPQVEM*CSPQVR
Trigger: ACGCACCTGTGGGGAGCACCACATCTCCACCTGCGG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGTFKSP*HVRSMV
Trigger: CACCATGGACCTCACGTGCCAGGGAGACTTGAATGT...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGACGTGTCCAGGTGTCTaGGGGAGTGGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPETCPGV*GSGPSL
Trigger: CAGGCTTGGCCCACTCCCCCAGACACCTGGACACGT...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCTTGTCCCAGATTTGTaGCCACGTGTCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGLVPDL*PRVQVS
Trigger: AGACACCTGGACACGTGGCCACAAATCTGGGACAAG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCTTGTCCCAGATTTGTaGCCACGTGTCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLVPDL*PRVQVS
Trigger: AGACACCTGGACACGTGGCCACAAATCTGGGACAAG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCCTCATGTTGCTGTTTaGACTTGGCCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRPHVAV*TWPAGS
Trigger: AGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGG...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAACGGGGTCCATGCCGATaGGCTCCCGCACGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKRGPCR*APARRS
Trigger: GCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCG...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGTTTCTGGAGCCGACTaGGGGACTGGAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAVSGAD*GTGEGY
Trigger: GTAGCCTTCTCCAGTCCCTCAGTCGGCTCCAGAAAC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCCTTGGCGCTGTACCCTaGCCTCCGGATGCGCACGGT +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLLGAVP*PPDAHG
Trigger: ACCGTGCGCATCCGGAGGTCAGGGTACAGCGCCAAG...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGAGCAGGCCTGGATGGTaGCGGCGGCCCGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWSRPGW*RRPASS
Trigger: AGATGAAGCGGGCCGCCGTCACCATCCAGGCCTGCT...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTGCCCTCCAGCCGCCTaGCCCTGTCCGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPCPPAA*PCPPSS
Trigger: TGAGGAGGGCGGACAGGGTCAGGCGGCTGGAGGGCA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGTTTCTGCTGCAGGCTaGGCCTTGGCCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLVSAAG*ALARDG
Trigger: CCCGTCCCTGGCCAAGGCTCAGCCTGCAGCAGAAAC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAGGCCAGCGCCCCAGGTaGCATGCGGTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPGQRPR*HAVDIL
Trigger: GAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCC...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGACGAAAACCCCAGTTTaGGAGGCCATGGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTTKTPV*EAMEHF
Trigger: AAAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGT...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGGGAGTGGGGAGATGTaGGGCCGCAGGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWGSGEM*GRRWRC
Trigger: ACATCTCCACCTGCGGCCTCACATCTCCCCACTCCC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCAGGCGTTGCCCTCCTaGCCCGTGAGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGQALPS*PVSSPE
Trigger: CTCAGGACTGCTCACGGGTCAGGAGGGCAACGCCTG...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCGCCTGGCTTCAGCATaGCTCCCAGGCTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLRLASA*LPGSGR
Trigger: GCGCCCCGAGCCTGGGAGGCATGCTGAAGCCAGGCG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGCGGCCCGAGCTGCCTaGCTCTTTCACACTCATCCT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQAARAA*LFHTHP
Trigger: AGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACCCGGCGGCCCGAGCTaGCTGCCTCTTTCACACTCA +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPPGGPS*LPLSHS
Trigger: TGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCATAGCAGCACCCGGTaGACAGGCGAGTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWHSSTR*TGESLA
Trigger: CGCCAACGACTCGCCTGTGCACCGGGTGCTGCTATG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAGCCTCTCAAAGTCATaGTTCAGGTCCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALASLSKS*FRSSPS
Trigger: AGATGGGGAGGACCTGAAGCATGACTTTGAGAGGCT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGCGTAGGAGCTGTCACTaGCCCGCAGCAGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLRRSCH*PAAGPR
Trigger: TCGTGGCCCTGCTGCGGGGCAGTGACAGCTCCTACG...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGGCCTCCCGAAGCACTaGCATGGCCCGGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMGLPKH*HGPDSS
Trigger: GCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCGGTGCAGCGTCTCCTaGAGGGCTTGCCGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGRCSVS*RACRSV
Trigger: GACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCGCACCACCTCCCGGTaGAGCGTCTCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSRTTSR*SVSCRA
Trigger: AGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTGCGGCCCGCTTCATCTaGAGGAAGTGCCGACGCTCC +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIAARFI*RKCRRS
Trigger: GGAGCGTCGGCACTTCCTGCAGATGAAGCGGGCCGC...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGGCTCCGATGCCAGGTaGCCGCCATCCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPGSDAR*PPSSAG
Trigger: GCCAGCGGAGGATGGCGGGCACCTGGCATCGGAGCC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGATCGTGGAGAAGGAGGTaGGCCTCTCCTCTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERSWRRR*ASPLWA
Trigger: CGCCCACAGAGGAGAGGCGCACCTCCTTCTCCACGA...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTGTCCGTGGTTTCTGCTaGAGGCTGAGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAVRGFC*RLSLGQ
Trigger: CTGGCCAAGGCTCAGCCTGCAGCAGAAACCACGGAC...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCGAAGTGGCCAGGCTCAACGCCTGGCTCGCCCTTCCTCCCGTAGGTGTAGGATCATCTTGCACACGCTaGAGAGCAGGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AEVARLNAWLALPPVGVGSSCTR*RAGPCP
Trigger: TGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGA...TCCTACACCTACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGCCACTTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR GCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGCCGGAGCTCCCGAGTaGGGTTGGCAGCACCCGACT +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSAGAPE*GWQHPT
Trigger: AGTCGGGTGCTGCCAACCGCACTCGGGAGCTCCGGC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGAAGTCGCCGTACTGTaGGAAGGTCATGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAEVAVL*EGHEGL
Trigger: GAGCCCCTCATGACCTTCGCACAGTACGGCGACTTC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTGAAGGCGATACTCTCTaGAGCCTCCAGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSREGDTL*SLQLAD
Trigger: ATCAGCCAACTGGAGGCTGCAGAGAGTATCGCCTTC...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTCATCGCCGCCGGCTaGCTCCTCCTCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGLIAAG*LLLQQH
Trigger: GTGCTGCTGGAGGAGGAGGCAGCCGGCGGCGATGAG...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCAGCAGGCTCTCGGTaGTGGCCGACGTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQPAGSR*WPTSPS
Trigger: ACTCGGAGACGTCGGCCAGCACCGAGAGCCTGCTGG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCAGCAGGCTCTCGGTaGTGGCCGACGTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWPAGSR*WPTSPS
Trigger: ACTCGGAGACGTCGGCCAGCACCGAGAGCCTGCTGG...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCCAGCAGGCTCTCGGTaGTGGCCGACGTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGPAGSR*WPTSPS
Trigger: ACTCGGAGACGTCGGCCAGCACCGAGAGCCTGCTGG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTGGCCTAGTGGCTTCTaGTCTGACAGCTCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGWPSGF*SDSSRP
Trigger: TGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCATTGGCCAGGTGGCTaGCCCCCGGAGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWHWPGG*PPETCV
Trigger: GACACATGTCTCCGGGGGGCAGCCACCTGGCCAATG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCAAAAGCAGCCTCCTaGAGCCCTTGGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKPKAAS*SPWRPE
Trigger: TTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAGTGGCCAGGCTCAAACACGTGCCCGTTGTaGTCCTGGACACGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EALSLVRLSTHTPKWPGSNTCPL*SWTRVH
Trigger: GTGGACACGTGTCCAGGAGCACAACGGGCACGTGTT...TGAGCCTGGCCACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGATCCTGCCGGCCGCCTaGCTTCAGCATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMILPAA*LQHASQ
Trigger: CTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGAT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAAGGCCTGGCTCTCGGTaGTGGACAGCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERRPGSR*WTAGGR
Trigger: TCTACCCCCAGCTGTCCACCACCGAGAGCCAGGCCT...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCACGCGGCACGAGGCCTaGCTCTCGGTGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSTRHEA*LSVVDS
Trigger: GCTGTCCACCACCGAGAGCCAGGCCTCGTGCCGCGT...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAAGGTGGTGCTGTCCTTaGTGGCAGTCACGCGGCACG +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTRWCCP*WQSRGT
Trigger: CGTGCCGCGTGACTGCCACCAAGGACAGCACCACCT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGCACAGGCGAGTCGTTaGCGTCCAGCACCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEAQASR*RPAPIP
Trigger: AGGAATGGGTGCTGGACGCCAACGACTCGCCTGTGC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGCGGTGAGGCAGTaGATGAGGAAGTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPRAVRQ*MRKLVL
Trigger: GAGCACCAACTTCCTCATCCACTGCCTCACCGCCCT...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGGCCAGCACCCAGGATaGTCCTCTCGACGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSGQHPG*SSRRRW
Trigger: CCAGCGGCGTCGAGAGGACCATCCTGGGTGCTGGCC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGGTCCAGCACCTCGGGTaGCCCGACCTCCAACCCTTC +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWVQHLG*PDLQPF
Trigger: GAAGGGTTGGAGGTCGGGCCACCCGAGGTGCTGGAC...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTTGGCCAGCAGGGTCTaGCTCGTGGCGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQLASRV*LVAWGK
Trigger: CTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTTGGCCAGCAGGGTCTaGCTCGTGGCGTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMILASRV*LVAWGK
Trigger: CTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAA...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGGCAGTAGGGACTTGGTaGTGCGGTCGTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAAVGTW*CGRAES
Trigger: TGACTCTGCACGACCGCACCACCAAGTCCCTACTGC...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGATGTCTGGAACTaGGCGCTGATGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPRDVWN*ALMLGG
Trigger: GCCACCAAGCATCAGCGCCCAGTTCCAGACATCCCT...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCCCCTCCATGAGGCCTaGAGGTACACGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMPLHEA*RYTAAC
Trigger: GCAGGCTGCCGTGTACCTCCAGGCCTCATGGAGGGG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGGGGGACCTGTCACTTaGCTGCACCTCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWGGPVT*LHLRLR
Trigger: TCGGAGCCTGAGGTGCAGCCAAGTGACAGGTCCCCC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGGGAGAGTCTTCTCTaGGCTTGGGGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAWESLL*AWGLLL
Trigger: GAGAAGGAGGCCCCAAGCCCAGAGAAGACTCTCCCA...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGCGTCCAGGTACCGCTaGATCTGCGTGGAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMASRYR*ICVEPP
Trigger: CGGAGGCTCCACGCAGATCCAGCGGTACCTGGACGC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGACAGTTCCACGGCGCTaGCCAGCCGCTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKTVPRR*PAARRP
Trigger: TGGACGCCGAGCGGCTGGCCAGCGCCGTGGAACTGT...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCTGGAGACGTCGCTCGTaGAGAAGGAGGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACWRRRS*RRRCAS
Trigger: AGAGGCGCACCTCCTTCTCCACGAGCGACGTCTCCA...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTGGAGACGTCGCTCGTaGAGAAGGAGGTGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQWRRRS*RRRCAS
Trigger: AGAGGCGCACCTCCTTCTCCACGAGCGACGTCTCCA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCTGCAGGCTGAGCCTTaGCCAGGGACGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMLQAEP*PGTGGA
Trigger: AGCTCCTCCCGTCCCTGGCCAAGGCTCAGCCTGCAG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCACCAGGCCCTTCTTCATaGTGGTGGCTTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPPGPSS*WWLPAP
Trigger: TGGTGCTGGAAGCCACCACCATGAAGAAGGGCCTGG...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGCAGGTCATCTTGCACACGCTGCAGAGCAGGGCCTTGTCCATGAGCCAGATGCCAGGCTCAACGCCTaGCTCGCCCTTCCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: VAGHLAHAAEQGLVHEPDARLNA*LALPPV
Trigger: TACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGC...ATCTGGCTCATGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp GGCCTTGTCCATGAGCCAGATATAGGAGAGGCACTGCTCGCACGACTGCGGGATACGCACACGCCGAAGTaGCCAGGCTCAACGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLVHEPDIGEALLARLRDTHTPK*PGSTPG
Trigger: GCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGT...ATCCCGCAGTCGTGCGAGCAGTGCCTCTCCTATATCTGGCTCATGGACAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCTTCTCCAGCACGATaGGCACCGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTASPAR*APRPCR
Trigger: GCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGC...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGCAGGTCATCTTGCACACGCTGCAGAGCAGGGCCTTGTCCATGAGCCAGATGCTCCCGAGTGCGGTTaGCAGCACCCGACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: VAGHLAHAAEQGLVHEPDAPECG*QHPTCG
Trigger: ACCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGC...ATCTGGCTCATGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGTTGTGGTTGGCTTCTaGAAGGTGCTCCAGGACGGC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPVVVGF*KVLQDG
Trigger: GCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAAC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCAGGGAGTTGTGGTTaGCTTCTGGAAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGPGSCG*LLEGAP
Trigger: TGGAGCACCTTCCAGAAGCCAACCACAACTCCCTGG...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGCAGGCTCTCGGTGCTaGCCGACGTCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMAGSRC*PTSPSP
Trigger: TGGACTCGGAGACGTCGGCCAGCACCGAGAGCCTGC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCGCAGGCTCTCGGTGCTaGCCGACGTCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGAGSRC*PTSPSP
Trigger: TGGACTCGGAGACGTCGGCCAGCACCGAGAGCCTGC...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERVGGQA*WELDVG
Trigger: GCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCAC...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAGACTTTGTCAGCTGTaGCTCTCAGCCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALARLCQL*LSAIGL
Trigger: CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGGTGCGTCCATGATTTaGGGGCTGCGTGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGGASMI*GLRARG
Trigger: CCCCCTCGCACGCAGCCCCCAAATCATGGACGCACC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGGTGCGTCCATGATTTaGGGGCTGCGTGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQGASMI*GLRARG
Trigger: CCCCCTCGCACGCAGCCCCCAAATCATGGACGCACC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTTGTCGCTGGTCAGGTGCCCGTTGTGCTCCTaGACACGTGTCCACGCACAC +
Preference number: 4 (lower is better)
Translates to: CSRSFSSTMGTEALSLVRCPLCS*TRVHAH
Trigger: GTGTGCGTGGACACGTGTCCAGGAGCACAACGGGCA...CCTGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR TCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCGGTTCACGCGCTTCCTaGGCATGGTGTAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACGSRAS*AWCSRP
Trigger: TGGCCTACTACACCATGCTCAGGAAGCGCGTGAACC...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAATCTTCAGGCTGCTTaGGCTGAAATTCTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALANLQAA*AEILGA
Trigger: AGCGCCAAGAATTTCAGCTCAAGCAGCCTGAAGATT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCATCTCCCGGAAGTCCTTaGTCTGATATTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALASPGSP*SDISPS
Trigger: GGAAGGTGAAATATCAGATCAAGGACTTCCGGGAGA...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTGTTTCTGGAGCCGACTaGGGGACTGGAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAVSGAD*GTGEGY
Trigger: GTAGCCTTCTCCAGTCCCTCAGTCGGCTCCAGAAAC...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCCTTGGCGCTGTACCCTaGCCTCCGGATGCGCACGGT +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSLGAVP*PPDAHG
Trigger: ACCGTGCGCATCCGGAGGTCAGGGTACAGCGCCAAG...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCCTGGAACTGCTCGGTaGAATCCTGGAACGTGTACT +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIPGTAR*NPGTCT
Trigger: AGTACACGTTCCAGGATTTCACCGAGCAGTTCCAGG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCAGCAGGCCTGGATGGTaGCGGCGGCCCGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPSRPGW*RRPASS
Trigger: AGATGAAGCGGGCCGCCGTCACCATCCAGGCCTGCT...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCCGAGATCATCTGGCTaGAGCTCTTGCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAPRSSG*SSCAAG
Trigger: ACCTGCAGCGCAAGAGCTTCAGCCAGATGATCTCGG...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGCTGGGGACTTTCTCGTaGCTTTCAGCCGCCACGGTT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQLGTFS*LSAATV
Trigger: AACCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAG...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGTTTCTGCTGCAGGCTaGGCCTTGGCCAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILVSAAG*ALARDG
Trigger: CCCGTCCCTGGCCAAGGCTCAGCCTGCAGCAGAAAC...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTGGTGTAGCCACGGGTaGACTCATCTAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAWCSHG*THLAVT
Trigger: AGTCACTGCTAGATGAGTTCACCCGTGGCTACACCA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCATTCCGCTTCTTCTTCTaGGCTTTGCTCTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: PQVAGHPLLGAPGRPALAFRFFF*ALLCFT
Trigger: AGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAA...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCAGGTGACATGCGGTTaGCATCCTCGAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPQVTCG*HPRAGP
Trigger: TGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGGCCAGCGCCCCAGGTaGCATGCGGTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYGQRPR*HAVDIL
Trigger: GAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGACTGGATCCGTTCAATaGGAATCTCCTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPTGSVQ*ESPFPG
Trigger: ACCGGGAAAAGGAGATTCTCATTGAACGGATCCAGT...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACCGGCAGCCGGTAGGTaGTGTCCTCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPPAAGR*CPPSPP
Trigger: AGGAGGAGAAGGAGGACATCACCTACCGGCTGCCGG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGGTCCATGGTGCCCCTaGCTCATGTCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQGPWCP*LMSWLQ
Trigger: CTGGAGCCAGGACATGAGTCAGGGGCACCATGGACC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAATGCCCTCCTGACCCGTaGGCAGTCCTGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKCPPDP*AVLSRW
Trigger: CCAGCGACTCAGGACTGCTCACGGGTCAGGAGGGCA...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAACAGGCGTTGCCCTCCTaGCCCGTGAGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKQALPS*PVSSPE
Trigger: CTCAGGACTGCTCACGGGTCAGGAGGGCAACGCCTG...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGACCTATAGGGAGGTCTaGCTTCAGGCGTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPETYREV*LQALPS
Trigger: GGAGGGCAACGCCTGAAGTCAGACCTCCCTATAGGT...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCACCAGGTTGTCCCTGTTaGCCTATAGGGAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPPGCPC*PIGRSD
Trigger: GTCAGACCTCCCTATAGGTCAACAGGGACAACCTGG...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTCATCAAAGTCCGCCTaGTGCCGTGGCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPSSKSA*CRGRRP
Trigger: TGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGA...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGTTCTTCAGGAGGTTaGCCTCGGTTAGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKGSSGG*PRLARG
Trigger: TCCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCGTAGGAGCTGTCACTaGCCCGCAGCAGGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSRRSCH*PAAGPR
Trigger: TCGTGGCCCTGCTGCGGGGCAGTGACAGCTCCTACG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCGGGGGTCCTCGCCCTaGCAGGGCAATCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQRGSSP*QGNPLM
Trigger: CATCAAAGGATTGCCCTGGCAGGGCGAGGACCCCCG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGGGCTTTTTCTTCTTGTaGAGGTGCAGTAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGGFFFL*RCSRDL
Trigger: CAAGTCCCTACTGCACCTGCACAAGAAGAAAAAGCC...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGAGGAGCACCTGGAACTaGTCGGTGAAATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGARSTWN*SVKSWN
Trigger: GTTCCAGGATTTCACCGAGCAGTTCCAGGTGCTCCT...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGGCGGCCCGCTTCATCTaGAGGAAGTGCCGACGCTCC +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKAARFI*RKCRRS
Trigger: GGAGCGTCGGCACTTCCTGCAGATGAAGCGGGCCGC...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAACTCTTGCGCTGCAGGTaGCCCCGACACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKLLRCR*PRHRLC
Trigger: GCAGAGCCTGTGTCGGGGGCACCTGCAGCGCAAGAG...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTCTTGCGCTGCAGGTaGCCCCGACACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLLRCR*PRHRLC
Trigger: GCAGAGCCTGTGTCGGGGGCACCTGCAGCGCAAGAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGATGCTCCAGCCCTCTTTaGCGACGCGACTCACGCTTC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERCSSPL*RRDSRF
Trigger: GAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCA...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGGCTGCCACATGGTTTaGTCTTGTCCTCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKGCHMV*SCPRGS
Trigger: AGACCCCCGAGGACAAGAGCAAACCATGTGGCAGCC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGAGGTACCGCTGGATCTaGGTGGAGCCTCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGRYRWI*VEPPGL
Trigger: CAGCCCCGGAGGCTCCACGCAGATCCAGCGGTACCT...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACACGTGCCCGGACACTaGATTCTCCAGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTHVPGH*ILQLLC
Trigger: GCAGAGGAGCTGGAGAATGCAGTGTCCGGGCACGTG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAGGTGCGCTTCTCACCTaGAGCGTGGCGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPGALLT*SVAMLL
Trigger: CAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACC...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAAACACGTGCCCGTTGTaGTCCTGGACAGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTNTCPL*SWTARS
Trigger: GGAGCGTGCTGTCCAGGAGCACAACGGGCACGTGTT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATCATCTTGCACACGCTaGAGAGCAGGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPSSCTR*RAGPCP
Trigger: TGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTCGGTGTACAGGCCGTaGATCTCCACGTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQSVYRP*ISTCSR
Trigger: CCTGGAACACGTGGAGATGCACGGCCTGTACACCGA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGGCCGGAGCTCCCGAGTaGGGTTGGCAGCACCCGACT +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLAGAPE*GWQHPT
Trigger: AGTCGGGTGCTGCCAACCGCACTCGGGAGCTCCGGC...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAGCTCCCGCAGCCACTaGTTCAGCACCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFSSRSH*FSTPVM
Trigger: CATCACAGGGGTGCTGAAGCAGTGGCTGCGGGAGCT...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGAAGTCGCCGTACTGTaGGAAGGTCATGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQEVAVL*EGHEGL
Trigger: GAGCCCCTCATGACCTTCGCACAGTACGGCGACTTC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGCAGCCAGCTGCTCCTaGTTCTCCGGCAGCTCGACG +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHAASCS*FSGSST
Trigger: CGTCGAGCTGCCGGAGAAGCAGGAGCAGCTGGCTGC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTGCGCAGGAGGCAGGGTaGGAAGATAATGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIAQEAG*EDNGQR
Trigger: GCGCTGGCCATTATCTTCGCACCCTGCCTCCTGCGC...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGCAGGAGCGAAAGCCTaGGGAAGGCGATACTCTCTG +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEAGAKA*GRRYSL
Trigger: CAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTCTGCACTGGCAGGTCTaGCCCGGGCGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMILHWQV*PGRDVH
Trigger: GTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAG...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCAGGTGGAGATGTGGTaGTCCCCACAGGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWQVEMW*SPQVRP
Trigger: TGGACGCACCTGTGGGGAGCACCACATCTCCACCTG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCATTGGCCAGGTGGCTaGCCCCCGGAGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWHWPGG*PPETCV
Trigger: GACACATGTCTCCGGGGGGCAGCCACCTGGCCAATG...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCGAAGGTTCCAGCATGTaGAAAAATGCACATTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPEGSSM*KNAHWP
Trigger: TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTC...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCCAAAAGCAGCCTCCTaGAGCCCTTGGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPPKAAS*SPWRPE
Trigger: TTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACCAAAAGCAGCCTCCTaGAGCCCTTGGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTPKAAS*SPWRPE
Trigger: TTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGAGAGAGGAGGGCCCTaGTCCAGAGATCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTERGGP*SRDPQV
Trigger: AACCTGGGGATCTCTGGAGCAGGGCCCTCCTCTCTC...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCAGATGGCAGGGTTACTaGAGCTTCAGGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPRWQGY*SFRAGS
Trigger: GCTGCCGGCCCTGAAGCTGCAGTAACCCTGCCATCT...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS-3UTR GCA 90 bp GTGGCAGGTCATCTTGCACACGCTGCAGAGCAGGGCCTTGTCCATGAGCCAGATACGCACACATACGCGTaGAGACGGGCCCATGCGCAC +
Preference number: 4 (lower is better)
Translates to: VAGHLAHAAEQGLVHEPDTHTYA*RRAHAH
Trigger: GTGCGCATGGGCCCGTCTGCACGCGTATGTGTGCGT...ATCTGGCTCATGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCAGGCCTGGCTCTCGGTaGTGGACAGCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGRPGSR*WTAGGR
Trigger: TCTACCCCCAGCTGTCCACCACCGAGAGCCAGGCCT...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGACGCGGCACGAGGCCTaGCTCTCGGTGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLTRHEA*LSVVDS
Trigger: GCTGTCCACCACCGAGAGCCAGGCCTCGTGCCGCGT...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGTGCTGTCCTTGGTaGCAGTCACGCGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIWCCPW*QSRGTR
Trigger: CCTCGTGCCGCGTGACTGCCACCAAGGACAGCACCA...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAAGGTGGTGCTGTCCTTaGTGGCAGTCACGCGGCACG +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPRWCCP*WQSRGT
Trigger: CGTGCCGCGTGACTGCCACCAAGGACAGCACCACCT...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGGCGCCGGGTGGCTGTaGCCTGCGCCACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHGAGWL*PAPPAA
Trigger: TGCAGCTGGTGGCGCAGGCCACAGCCACCCGGCGCC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCCACTAGGCGCCGGGTaGCTGTGGCCTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEPLGAG*LWPAPP
Trigger: TGGTGGCGCAGGCCACAGCCACCCGGCGCCTAGTGG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTCAGCGCGAAGACGTGTaGCTCCAGCTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIQREDV*LQLAQL
Trigger: CAGCTGGGCAAGCTGGAGCCACACGTCTTCGCGCTG...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGAGGAAGTTGGTGCTCTaGGTCTTGCCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWRKLVL*VLPEPL
Trigger: GAGCGGCTCCGGCAAGACCCAGAGCACCAACTTCCT...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCGCTGTACAGAGACTTaGCCATGGAGTCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPARCTET*PWSRGQ
Trigger: CTGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGTCTGGCTCGTGGCGTaGGGGAAGTTGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLVWLVA*GKLLSS
Trigger: CGAGGAGAGCAACTTCCCCCACGCCACGAGCCAGAC...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCCTGGATGATGAAAGCTaGCTCCATGACCGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACLDDES*LHDRGA
Trigger: GGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAG...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGTTGTTAAGGGATGTCTaGAACTGGGCGCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLLRDV*NWALML
Trigger: AAGCATCAGCGCCCAGTTCCAGACATCCCTTAACAA...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAGCCTGGGGCTCCCACTaGGCAGCGTCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERAWGSH*AASSQF
Trigger: AAACTGAGAAGACGCTGCCCAGTGGGAGCCCCAGGC...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCTGCAGGCTGAGCCTTaGCCAGGGACGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILLQAEP*PGTGGA
Trigger: AGCTCCTCCCGTCCCTGGCCAAGGCTCAGCCTGCAG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGTTCGCTCTCCGTCCGTaGTTTCTGCTGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEFALRP*FLLQAE
Trigger: CTCAGCCTGCAGCAGAAACCACGGACGGAGAGCGAA...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGAGGATGCGTCGCCTaGCTTCTTCTTCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQGGCVA*LLLLDS
Trigger: GCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGGCCCTTCTTCATGGTaGTGGCTTCCAGCACCACGT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEGPSSW*WLPAPR
Trigger: ACGTGGTGCTGGAAGCCACCACCATGAAGAAGGGCC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCTTGGCGTTGGTGATCTaGCGGAACACCGATTCCCGC +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACLALVI*RNTDSR
Trigger: GCGGGAATCGGTGTTCCGCCAGATCACCAACGCCAA...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGAGGTTGGTGTCCTTCTaGCCACGCTCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWRLVSF*PRSVAR
Trigger: CCTGGCCACTGAGCGTGGCCAGAAGGACACCAACCT...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGCCAGGCTCAACGCCTaGCTCGCCCTTCCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGARLNA*LALPPV
Trigger: TACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGCCAGGCTCAACGCCTaGCTCGCCCTTCCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILARLNA*LALPPV
Trigger: TACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGC...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACACGCACACGCCGAAGTaGCCAGGCTCAACGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHTHTPK*PGSTPG
Trigger: GCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGT...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCACGCACTTCTTGTGGCAGGTCATCTTGCACACGCTGCAGAGCAGGGCCTTGTGCTTCTCCAGCACGATaGGCACCGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: ARTSCGRSSCTRCRAGPCASPAR*APRPCR
Trigger: GCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGC...ACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACAAGAAGTGCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGCTCCCGAGTGCGGTTaGCAGCACCCGACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSAPECG*QHPTCG
Trigger: ACCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCTCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGSSSSS*MSRVLG
Trigger: CCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGA...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGCAGGCTCTCGGTGCTaGCCGACGTCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPAGSRC*PTSPSP
Trigger: TGGACTCGGAGACGTCGGCCAGCACCGAGAGCCTGC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCCGACGGCCTTCGTCGTaGAGGGGCGGCCACGGTGGG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLARRPSS*RGGHGG
Trigger: CCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCG...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGVGGQA*WELDVG
Trigger: GCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCAC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACCAGGGCGCCCTGCACTaGCAGGTCTGCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHQGALH*QVCPGR
Trigger: ACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTG...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCCGAGTACCTCCGCTTaGCCCCAGGTGGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSPSTSA*PQVAGH
Trigger: ATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGGTGCGTCCATGATTTaGGGGCTGCGTGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSGASMI*GLRARG
Trigger: CCCCCTCGCACGCAGCCCCCAAATCATGGACGCACC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCCGCCCTGGGGCCTGCTaGGATGGACGGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPRPGAC*DGREGE
Trigger: TTCTCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCG...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS-3UTR TCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATCTCCATGGCCTGCTTaGGCCTCTCAAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPSPWPA*ASQSHA
Trigger: AGCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGCGGAAGTCCTTGATCTaGTATTTCACCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGARKSLI*YFTFPA
Trigger: CGCAGGGAAGGTGAAATATCAGATCAAGGACTTCCG...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCTGGGGACTTTCTCGTaGCTTTCAGCCGCCACGGTT +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPLGTFS*LSAATV
Trigger: AACCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGCTCATTGGCGTTGGTaGTCTGGCGGAACACCGATT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEAHWRW*SGGTPI
Trigger: AATCGGTGTTCCGCCAGATCACCAACGCCAATGAGC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCAGTGGCCAGGTTGCTaGCGACGATCTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEQWPGC*RRSGSS
Trigger: AGAACTACCAGATCGTCGTCAGCAACCTGGCCACTG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCAGTGGCCAGGTTGCTaGCGACGATCTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAQWPGC*RRSGSS
Trigger: AGAACTACCAGATCGTCGTCAGCAACCTGGCCACTG...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGGAAGTTCTCCAGCTTaGCTGCTGCGGGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTGSSPA*LLRGLS
Trigger: AGACAGACCCCGCAGCAGTCAAGCTGGAGAACTTCC...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTCCTCATCTGCTCCTTaGTCAGCATCTCCACGCACG +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVASSSAP*SASPRT
Trigger: CGTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRTSRHS*AFDSGS
Trigger: GGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGT...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCCACAGGTGCGTCCATaGTTTGGGGGCTGCGTGCGA +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGPQVRP*FGGCVR
Trigger: TCGCACGCAGCCCCCAAATCATGGACGCACCTGTGG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCCACAGGTGCGTCCATaGTTTGGGGGCTGCGTGCGA +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPPQVRP*FGGCVR
Trigger: TCGCACGCAGCCCCCAAATCATGGACGCACCTGTGG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGTGGCGTCCGGAAGAGTaGCAGCCACATTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEWRPEE*QPHSSL
Trigger: GAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCA...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCAGGCGTTGCCCTCCTaGCCCGTGAGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLQALPS*PVSSPE
Trigger: CTCAGGACTGCTCACGGGTCAGGAGGGCAACGCCTG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAACCTATAGGGAGGTCTaGCTTCAGGCGTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTTYREV*LQALPS
Trigger: GGAGGGCAACGCCTGAAGTCAGACCTCCCTATAGGT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCTTTCACACTCATCCTaGCGGCCGCCTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGLSHSS*RPPGFS
Trigger: GCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGCCACCAGCTGCATATaGACGTACTTGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGATSCI*TYLMVP
Trigger: TGGAACCATCAAGTACGTGCATATGCAGCTGGTGGC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGTCAAAGTCCGCCTGCTaGCGTGGCAGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLSKSAC*RGRRPR
Trigger: GCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGA...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTCCAGCTTGCCCAGCTaGTGGTTCTCATACATCTTC +
Preference number: 4 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGSSLPS*WFSYIF
Trigger: GAAGATGTATGAGAACCAGCAGCTGGGCAAGCTGGA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGTGGTGCTCTGGGTCTTaGCGGAGCCGCTCTCACCCG +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLWCSGS*RSRSHP
Trigger: CGGGTGAGAGCGGCTCCGGCAAGACCCAGAGCACCA...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGCCTCTCAAAGTCATaGTTCAGGTCCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGSLSKS*FRSSPS
Trigger: AGATGGGGAGGACCTGAAGCATGACTTTGAGAGGCT...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGACAGGCACGAGACTaGCTCTTCCACGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQGQARD*LFHVLL
Trigger: AAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCAGGGCTGCTCATACCTaGAGCCTTTTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPRAAHT*SLFGPL
Trigger: GAGAGGGCCGAAAAGGCTGCAGGTATGAGCAGCCCT...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTTTGGGCACCAGGGCTaGTCATACCTGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAAFGHQG*SYLQPF
Trigger: AAAAGGCTGCAGGTATGAGCAGCCCTGGTGCCCAAA...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGTTTTTCCGAAGGGGTaGTGGCTCCTCTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEVFPKG*WLLLAA
Trigger: AGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAAC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGTCTCCTGCAGGGCTTaGCGCTCCGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKVSCRA*RSVSFR
Trigger: CCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGAC...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGATCCGGAACCAGCTCTaGAGCAGCAGGATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKIRNQL*SSRIFR
Trigger: GCGGAAAATCCTGCTGCTGCAGAGCTGGTTCCGGAT...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACCCCGACACAGGCTCTaGAGGCGGATGATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPPRHRL*RRMMLC
Trigger: ACAGAGCATCATCCGCCTGCAGAGCCTGTGTCGGGG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTGAAGCTCTTGCGCTaGAGGTGCCCCCGACACAGG +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLKLLR*RCPRHR
Trigger: CCTGTGTCGGGGGCACCTGCAGCGCAAGAGCTTCAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGACCTGTCACTTGGCTaGACCTCAGGCTCCGATGCC +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQDLSLG*TSGSDA
Trigger: GGCATCGGAGCCTGAGGTGCAGCCAAGTGACAGGTC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGTGCTCCAGCCCTCTTTaGCGACGCGACTCACGCTTC +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMCSSPL*RRDSRF
Trigger: GAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCA...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAATCGTGGAGAAGGAGGTaGGCCTCTCCTCTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKSWRRR*ASPLWA
Trigger: CGCCCACAGAGGAGAGGCGCACCTCCTTCTCCACGA...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGTCCGTGGTTTCTGCTaGAGGCTGAGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLVRGFC*RLSLGQ
Trigger: CTGGCCAAGGCTCAGCCTGCAGCAGAAACCACGGAC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGCAGCGTGGCGATGCTaGTGTCCGGAGGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEAAWRC*CPEGAS
Trigger: GGAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGTGCGCTTCTCACCTaGAGCGTGGCGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKGALLT*SVAMLL
Trigger: CAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACC...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGGTGCGCTTCTCACCTaGAGCGTGGCGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGGALLT*SVAMLL
Trigger: CAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCTCCTGGTTCCTTGGTaGGCTTCTCACCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPALLVPW*ASHLQR
Trigger: ACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCTCGGTGTACAGGCCGTaGATCTCCACGTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFSVYRP*ISTCSR
Trigger: CCTGGAACACGTGGAGATGCACGGCCTGTACACCGA...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTCTGTCTGCAGCGCCTaGCGGAGCTCCCGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWSVCSA*RSSRVR
Trigger: CCGCACTCGGGAGCTCCGGCAGGCGCTGCAGACAGA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGCTGCGGGGTCTGTCTaGAGCGCCTGCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHAAGSV*SACRSS
Trigger: GGAGCTCCGGCAGGCGCTGCAGACAGACCCCGCAGC...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCCTCCAGCTTGACTGCTaGGGGGTCTGTCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPLQLDC*GVCLQR
Trigger: GCGCTGCAGACAGACCCCGCAGCAGTCAAGCTGGAG...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAGTTCTCCAGCTTGACTaGTGCGGGGTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERVLQLD*CGVCLQ
Trigger: CTGCAGACAGACCCCGCAGCAGTCAAGCTGGAGAAC...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGAGCTCCCGCAGCCACTaGTTCAGCACCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQSSRSH*FSTPVM
Trigger: CATCACAGGGGTGCTGAAGCAGTGGCTGCGGGAGCT...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGCAGGAGGCAGGGTaGGAAGATAATGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKAQEAG*EDNGQR
Trigger: GCGCTGGCCATTATCTTCGCACCCTGCCTCCTGCGC...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCTGCACTGGCAGGTCTaGCCCGGGCGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSLHWQV*PGRDVH
Trigger: GTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATCAGCCGGCCTCTCCCTaGCTTGACTCTGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYQPASP*LDSALG
Trigger: CCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTG...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCCGGCCTCTCCCTaGCTTGACTCTGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGQPASP*LDSALG
Trigger: CCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTG...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCAGCCGGCCTCTCCCTaGCTTGACTCTGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGQPASP*LDSALG
Trigger: CCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGGTGCTCCCCACAGGTaGGTCCATGATTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGGAPHR*VHDLGA
Trigger: AGCCCCCAAATCATGGACGCACCTGTGGGGAGCACC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGCAGCATGTGCAAAAATaGACATTGGCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAQHVQK*TLARWL
Trigger: CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTG...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGGAAGGTTCCAGCATGTaGAAAAATGCACATTGGCCA +
Preference number: 4 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPEGSSM*KNAHWP
Trigger: TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTC...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCCAAAAGCAGCCTCCTaGAGCCCTTGGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMPKAAS*SPWRPE
Trigger: TTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGAGAGAGGAGGGCCCTaGTCCAGAGATCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGERGGP*SRDPQV
Trigger: AACCTGGGGATCTCTGGAGCAGGGCCCTCCTCTCTC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTTGACACGTGCATGCTCCTaGCAATGTTCGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: CISTCSRSFSSTMGTEALTRACS*QCSPAR
Trigger: CCGAGCAGGCGAACATTGGCAGGAGCATGCACGTGT...CAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGCACATAACATTTaGTGCCGTCCAGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAPAHNI*CRPAAG
Trigger: GCCTGCGGCTGGACGGCACCAAATGTTATGTGCTGG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACCAGCACATAACATTTaGTGCCGTCCAGCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTPAHNI*CRPAAG
Trigger: GCCTGCGGCTGGACGGCACCAAATGTTATGTGCTGG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGCACAGGCGAGTCGTTaGCGTCCAGCACCCATTCCT +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQAQASR*RPAPIP
Trigger: AGGAATGGGTGCTGGACGCCAACGACTCGCCTGTGC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGAGCTTGCCCAGCTGCTaGTTCTCATACATCTTCACG +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGASLPSC*FSYIFT
Trigger: CGTGAAGATGTATGAGAACCAGCAGCTGGGCAAGCT...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCTGTCCAGGACCCCAATaGACAGGCACGAGACTGCCT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFCPGPQ*TGTRLP
Trigger: AGGCAGTCTCGTGCCTGTCCATTGGGGTCCTGGACA...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGTCTGGCTCGTGGCGTaGGGGAAGTTGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILVWLVA*GKLLSS
Trigger: CGAGGAGAGCAACTTCCCCCACGCCACGAGCCAGAC...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGCAGGGTCTGGCTCGTaGCGTGGGGGAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHAGSGS*RGGSCS
Trigger: AGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGCAGGGTCTGGCTCGTaGCGTGGGGGAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYAGSGS*RGGSCS
Trigger: AGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGAGCCGACTGAGGGACTaGAGAAGGCTACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKSRLRD*RRLRGS
Trigger: GGACCCCCGTAGCCTTCTCCAGTCCCTCAGTCGGCT...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAGGTGCAGTAGGGACTTaGTGGTGCGGTCGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPGAVGT*WCGRAE
Trigger: CTCTGCACGACCGCACCACCAAGTCCCTACTGCACC...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGGGGGACCTGTCACTTaGCTGCACCTCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYGGPVT*LHLRLR
Trigger: TCGGAGCCTGAGGTGCAGCCAAGTGACAGGTCCCCC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCGCCGCCACGGTTTTCTaGGGTGGGAGAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFAATVF*GGRVFS
Trigger: AGAGAAGACTCTCCCACCCCAGAAAACCGTGGCGGC...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCCAACTGCCATGGCCTaGGGTTGCTCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSPTAMA*GCSVGC
Trigger: GCAGCCCACAGAGCAACCCCAGGCCATGGCAGTTGG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGGCGTCCAGGTACCGCTaGATCTGCGTGGAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLASRYR*ICVEPP
Trigger: CGGAGGCTCCACGCAGATCCAGCGGTACCTGGACGC...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCTGAGGTCCAGGGACTaGCTGAGCATGGCACTAGGG +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGLRSRD*LSMALG
Trigger: CCCTAGTGCCATGCTCAGCCAGTCCCTGGACCTCAG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGGGACGGGAGGAGCTTaGAGACGTCGCTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGGTGGA*RRRSWR
Trigger: TCTCCACGAGCGACGTCTCCAAGCTCCTCCCGTCCC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGGGACGGGAGGAGCTTaGAGACGTCGCTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPGTGGA*RRRSWR
Trigger: TCTCCACGAGCGACGTCTCCAAGCTCCTCCCGTCCC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCCTGGCTTCTTCTTCTaGACAGCTGGCTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIPGFFF*TAGFFA
Trigger: TGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGACAGCCCTGCGTCTaGGAGGGAGGATGCGTCGCC +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEGQPCV*EGGCVA
Trigger: GGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCTTCTTCATGGTGGTaGCTTCCAGCACCACGTGCC +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAPSSWW*LPAPRA
Trigger: GGCACGTGGTGCTGGAAGCCACCACCATGAAGAAGG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTCCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACA +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIPRPCR*SGCLRT
Trigger: TGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGG...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGGCTCCCGAGTGCGGTTaGCAGCACCCGACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLAPECG*QHPTCG
Trigger: ACCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGC...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCACCCCTGTGATGGCGTaGATGGGGAAGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFTPVMA*MGKFSS
Trigger: GCTGGAGAACTTCCCCATCCACGCCATCACAGGGGT...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTCCAGGACGGCATAGATaGCAGCCAGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIPGRHR*QPAAPA
Trigger: AGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGG...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCTCTCCAGGGAGTTGTaGTTGGCTTCTGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPELSREL*LASGRC
Trigger: GCACCTTCCAGAAGCCAACCACAACTCCCTGGAGAG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCCAGTTTGAGAGGCCATaGAGCATTTTGTCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIQFERP*SILSQE
Trigger: CTCCTGCGACAAAATGCTCCATGGCCTCTCAAACTG...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGGAGGGCAGGCCTGGTaGGAGCTTGATGTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSGGQAW*ELDVGR
Trigger: ACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGGAGGGCAGGCCTGGTaGGAGCTTGATGTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHGGQAW*ELDVGR
Trigger: ACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGTGGGAGGGCAGGCCTaGTGGGAGCTTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKVGGQA*WELDVG
Trigger: GCCAACATCAAGCTCCCACCAGGCCTGCCCTCCCAC...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGGGCAGGCAGTACGTTaGGGGATCCGAGTACCTCCG +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSGQAVR*GIRVPP
Trigger: CGGAGGTACTCGGATCCCCCAACGTACTGCCTGCCC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGCCTCAGACGCGCAGTaGCCTAGTGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQASDAQ*PSGFCS
Trigger: AGAGCAGAAGCCACTAGGCCACTGCGCGTCTGAGGC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAACGTGTCCAGGTGTCTaGGGGAGTGGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKTCPGV*GSGPSL
Trigger: CAGGCTTGGCCCACTCCCCCAGACACCTGGACACGT...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACACGTGTCCAGGTGTCTaGGGGAGTGGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHTCPGV*GSGPSL
Trigger: CAGGCTTGGCCCACTCCCCCAGACACCTGGACACGT...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGACGTGTCCAGGTGTCTaGGGGAGTGGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKTCPGV*GSGPSL
Trigger: CAGGCTTGGCCCACTCCCCCAGACACCTGGACACGT...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCGCCTCCCGACTCTTTaGCCTCCACCAGCACATAAC +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRLPTL*PPPAHN
Trigger: GTTATGTGCTGGTGGAGGTCAAAGAGTCGGGAGGCG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGGTTCACGCGCTTCCTaGGCATGGTGTAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMGSRAS*AWCSRP
Trigger: TGGCCTACTACACCATGCTCAGGAAGCGCGTGAACC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGGCGCTCTTCCTCGCTaGCCCCAAGTAACAAATAAT +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPGALPR*PQVTNN
Trigger: ATTATTTGTTACTTGGGGTCAGCGAGGAAGAGCGCC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCTCCCGGAAGTCCTTaGTCTGATATTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGASPGSP*SDISPS
Trigger: GGAAGGTGAAATATCAGATCAAGGACTTCCGGGAGA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGGTCATTTATCTTGTTaGGCAGGAACTCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGGHLSC*AGTRPG
Trigger: ACCTGGACGAGTTCCTGCTCAACAAGATAAATGACC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGCTTCAGCACCCCTGTaGTGGCGTGGATGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPASAPL*WRGWGS
Trigger: ACTTCCCCATCCACGCCATCACAGGGGTGCTGAAGC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGCTTCAGCACCCCTGTaGTGGCGTGGATGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYASAPL*WRGWGS
Trigger: ACTTCCCCATCCACGCCATCACAGGGGTGCTGAAGC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGGGCCAGCGCCCCAGGTaGCATGCGGTTGACATCCTC +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWGQRPR*HAVDIL
Trigger: GAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCC...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTTCTGGATCCTTCTCTaGGGGCCGAACACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQFWILL*GPNTSS
Trigger: AGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCCACAGGTGCGTCCATaGTTTGGGGGCTGCGTGCGA +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLPQVRP*FGGCVR
Trigger: TCGCACGCAGCCCCCAAATCATGGACGCACCTGTGG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLEARVR*PKCPKL
Trigger: GAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCACCCGTGAGCAGTCCTaGGTCGCTGGCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGTREQS*VAGSYS
Trigger: AGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGT...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAACCCGTGAGCAGTCCTaGGTCGCTGGCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPTREQS*VAGSYS
Trigger: AGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGT...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGCGGCCCGAGCTGCCTaGCTCTTTCACACTCATCCT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSAARAA*LFHTHP
Trigger: AGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGCACATAACATTTGGTaGCGTCCAGCCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQAHNIW*RPAAGW
Trigger: CCAGCCTGCGGCTGGACGGCACCAAATGTTATGTGC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGTCATCAAAGTCCGCCTaGTGCCGTGGCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGSSKSA*CRGRRP
Trigger: TGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGA...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGGTTCTTCAGGAGGTTaGCCTCGGTTAGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMGSSGG*PRLARG
Trigger: TCCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCACCCGAGATCACGATaGACTGGTTCACGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGHPRSR*TGSRAS
Trigger: GGAAGCGCGTGAACCAGTGCATCGTGATCTCGGGTG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTTCACCTTCAGAAGCTaGGACAGGGTGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPFTFRS*DRVSST
Trigger: GGTGCTGGACACCCTGTCGCAGCTTCTGAAGGTGAA...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTTTGGGCACCAGGGCTaGTCATACCTGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQFGHQG*SYLQPF
Trigger: AAAAGGCTGCAGGTATGAGCAGCCCTGGTGCCCAAA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACCGCACCACCTCCCGGTaGAGCGTCTCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHRTTSR*SVSCRA
Trigger: AGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCG...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAATCCGGAACCAGCTCTaGAGCAGCAGGATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERIRNQL*SSRIFR
Trigger: GCGGAAAATCCTGCTGCTGCAGAGCTGGTTCCGGAT...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCCCCCGACACAGGCTCTaGAGGCGGATGATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSPRHRL*RRMMLC
Trigger: ACAGAGCATCATCCGCCTGCAGAGCCTGTGTCGGGG...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGGACCTGTCACTTGGCTaGACCTCAGGCTCCGATGCC +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGDLSLG*TSGSDA
Trigger: GGCATCGGAGCCTGAGGTGCAGCCAAGTGACAGGTC...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATCACGCTTCTCCCGGCTaGTGGGGACTTTCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYHASPG*WGLSRD
Trigger: GTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTG...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCTTCTGGAACTTGACGTaGTCCAGCCCTCTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACFWNLT*SSPLCR
Trigger: TCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAA...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTGGGAGGGAGGATaGGTCGCCTGGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMVWEGG*VAWLLL
Trigger: AAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGAC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGTCTGGGAGGGAGGATaGGTCGCCTGGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLVWEGG*VAWLLL
Trigger: AAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGAC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCCACGTGCCCGGACACTaGATTCTCCAGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPHVPGH*ILQLLC
Trigger: GCAGAGGAGCTGGAGAATGCAGTGTCCGGGCACGTG...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGCAGCGTGGCGATGCTaGTGTCCGGAGGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPAAWRC*CPEGAS
Trigger: GGAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGC...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACCTGCAGCGTGGCGATaGTGCTGTCCGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPPAAWR*CCPEGA
Trigger: AGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGG...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGTCTTCTTCTGAGCTTTaGTCTGCTTCACTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGSSSEL*SASLAR
Trigger: TCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGA...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAACACGTGCCCGTTGTaGTCCTGGACAGCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSNTCPL*SWTARS
Trigger: GGAGCGTGCTGTCCAGGAGCACAACGGGCACGTGTT...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGTACAGGCCGTGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATGGGCATCGGTGTACAGGCCGTaGATCTCCACGTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CTGRASPRVPGASPARWASVYRP*ISTCSR
Trigger: CCTGGAACACGTGGAGATGCACGGCCTGTACACCGA...TGCCCATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCACGGCCTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGTGGCAGCACCCGACTTaGGGTAGAGGCCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLWQHPT*GRGPRC
Trigger: ACACCGAGGGCCTCTACCGCAAGTCGGGTGCTGCCA...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGTTCTCCAGCTTGACTaGTGCGGGGTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQVLQLD*CGVCLQ
Trigger: CTGCAGACAGACCCCGCAGCAGTCAAGCTGGAGAAC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGTTCTCCAGCTTGACTaGTGCGGGGTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGVLQLD*CGVCLQ
Trigger: CTGCAGACAGACCCCGCAGCAGTCAAGCTGGAGAAC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGCAGCCAGCTGCTCCTaGTTCTCCGGCAGCTCGACG +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEAASCS*FSGSST
Trigger: CGTCGAGCTGCCGGAGAAGCAGGAGCAGCTGGCTGC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGGAAGGCGATACTCTCTaGAGCCTCCAGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKEGDTL*SLQLAD
Trigger: ATCAGCCAACTGGAGGCTGCAGAGAGTATCGCCTTC...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCTCATCGCCGCCGGCTaGCTCCTCCTCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHLIAAG*LLLQQH
Trigger: GTGCTGCTGGAGGAGGAGGCAGCCGGCGGCGATGAG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCTGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSCTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CGTGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCCTTGTCGCTGGTCAGGACTCTCATCTATGTaGAGCCTACTCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: RVPGASPARWAPRPCRWSGLSSM*SLLTAR
Trigger: GCGTGCTGTGAGTAGGCTGCACATAGATGAGAGTCC...TGACCAGCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGCGCTGTACAGAGACTTaGCCATGGAGTCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKRCTET*PWSRGQ
Trigger: CTGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCG...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGCAGGGTCTGGCTCGTaGCGTGGGGGAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPAGSGS*RGGSCS
Trigger: AGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGACAGGGCCACGATGTCTaGCCGCATGTAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERQGHDV*PHVVHV
Trigger: AACATGGACTACATGCGGCCAGACATCGTGGCCCTG...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGAGCCGACTGAGGGACTaGAGAAGGCTACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLSRLRD*RRLRGS
Trigger: GGACCCCCGTAGCCTTCTCCAGTCCCTCAGTCGGCT...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGTGCTCGGTGAAATCCTaGAACGTGTACTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPECSVKS*NVYLAL
Trigger: CAGCGCCAAGTACACGTTCCAGGATTTCACCGAGCA...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTGGGAGAGTCTTCTCTaGGCTTGGGGCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGWESLL*AWGLLL
Trigger: GAGAAGGAGGCCCCAAGCCCAGAGAAGACTCTCCCA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCGCTTCTCCCGGCTGCTaGGGACTTTCTCGTGACTTT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFASPGC*GLSRDF
Trigger: AAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGC...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTGGATGTGTTTGTTCTaGAACTTGACGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAWMCLF*NLTCSS
Trigger: GCTGGAGCACGTCAAGTTCCAGAACAAACACATCCA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACTCACCCCTTGCTCCTaGGTGACCCTTCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPLTPCS*VTLLEG
Trigger: ACCTTCCAGAAGGGTCACCCAGGAGCAAGGGGTGAG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCCTCACCCCTTGCTCCTaGGTGACCCTTCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLLTPCS*VTLLEG
Trigger: ACCTTCCAGAAGGGTCACCCAGGAGCAAGGGGTGAG...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCCCTGGGGTTGCTCTGTaGGCTGCTTTTGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACPGVAL*AAFEMC
Trigger: ACACATCTCAAAAGCAGCCCACAGAGCAACCCCAGG...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCCTTGCCAACTGCCATaGCCTGGGGTTGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILPCQLP*PGVALW
Trigger: CCACAGAGCAACCCCAGGCCATGGCAGTTGGCAAGG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGGCCTGGGGCTCCCACTaGGCAGCGTCTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGAWGSH*AASSQF
Trigger: AAACTGAGAAGACGCTGCCCAGTGGGAGCCCCAGGC...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCCTGAGGTCCAGGGACTaGCTGAGCATGGCACTAGGG +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPLRSRD*LSMALG
Trigger: CCCTAGTGCCATGCTCAGCCAGTCCCTGGACCTCAG...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCACTTCTTCTGGACAGCTaGCTTTTTCGCACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPLLLDS*LFRTSL
Trigger: GAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAG...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGGAGGATGCGTCGCCTaGCTTCTTCTTCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQGGCVA*LLLLDS
Trigger: GCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCCAGGCCCTTCTTCATaGTGGTGGCTTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMPGPSS*WWLPAP
Trigger: TGGTGCTGGAAGCCACCACCATGAAGAAGGGCCTGG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTTCTCACCTGCAGCGTaGCGATGCTGCTGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKFSPAA*RCCCPE
Trigger: CTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGCCTCCTGGTTCCTTaGTGCGCTTCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMICLLVP*CASHLQ
Trigger: CTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCA...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTTGGCGTTGGTGATCTaGCGGAACACCGATTCCCGC +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGLALVI*RNTDSR
Trigger: GCGGGAATCGGTGTTCCGCCAGATCACCAACGCCAA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGTTGGCGTTGGTGATCTaGCGGAACACCGATTCCCGC +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMLALVI*RNTDSR
Trigger: GCGGGAATCGGTGTTCCGCCAGATCACCAACGCCAA...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCTCAATGGGCGTCTTCTaGGAACGGAGGTCATTTATC +
Preference number: 4 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAISMGVF*ERRSFI
Trigger: GATAAATGACCTCCGTTCCCAGAAGACGCCCATTGA...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGAGGTTGGTGTCCTTCTaGCCACGCTCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILRLVSF*PRSVAR
Trigger: CCTGGCCACTGAGCGTGGCCAGAAGGACACCAACCT...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACA +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILPRPCR*SGCLRT
Trigger: TGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCCAGGACGGCATAGATaGCAGCCAGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKPGRHR*QPAAPA
Trigger: AGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGGTTGTGGTTGGCTTCTaGAAGGTGCTCCAGGACGGC +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWVVVGF*KVLQDG
Trigger: GCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAAC...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCTCTCCAGGGAGTTGTaGTTGGCTTCTGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPALSREL*LASGRC
Trigger: GCACCTTCCAGAAGCCAACCACAACTCCCTGGAGAG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAGGACGTCCTTCATGCTaGTCAGCGGGTCCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPGRPSC*SAGPSC
Trigger: ACAACTCGGACCCGCTGACCAGCATGAAGGACGTCC...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGGGGCAGGCAGTACGTTaGGGGATCCGAGTACCTCCG +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLGQAVR*GIRVPP
Trigger: CGGAGGTACTCGGATCCCCCAACGTACTGCCTGCCC...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGCCTCAGACGCGCAGTaGCCTAGTGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSASDAQ*PSGFCS
Trigger: AGAGCAGAAGCCACTAGGCCACTGCGCGTCTGAGGC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTGTCCAAAACTCTCATaGAGGGTCCCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVACPKLS*RVPAHW
Trigger: CCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGCAGTCCTGAGTCGCTaGCTCCTATTCTGTCACACG +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPAVLSR*LLFCHT
Trigger: CGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGGTTCACGCGCTTCCTaGGCATGGTGTAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYGSRAS*AWCSRP
Trigger: TGGCCTACTACACCATGCTCAGGAAGCGCGTGAACC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGATCAGGCTGCTTGAGCTaGAATTCTTGGCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERSGCLS*NSWRSS
Trigger: GGAAGAGCGCCAAGAATTTCAGCTCAAGCAGCCTGA...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTTCAGGCTGCTTGAGCTaGAATTCTTGGCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPASGCLS*NSWRSS
Trigger: GGAAGAGCGCCAAGAATTTCAGCTCAAGCAGCCTGA...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCTCTGGAACTGGGCGCTaGTGCTTGGTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFSGTGR*CLVAFS
Trigger: AGAAAAAGCCACCAAGCATCAGCGCCCAGTTCCAGA...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCCTGGAACTGCTCGGTaGAATCCTGGAACGTGTACT +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWPGTAR*NPGTCT
Trigger: AGTACACGTTCCAGGATTTCACCGAGCAGTTCCAGG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCCGAGATCATCTGGCTaGAGCTCTTGCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILPRSSG*SSCAAG
Trigger: ACCTGCAGCGCAAGAGCTTCAGCCAGATGATCTCGG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGTTTGTTCTGGAACTTaGCGTGCTCCAGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQVCSGT*RAPALF
Trigger: AAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAAC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCTGTCGGGCTTTTCCTaGACCCTTGGGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPLSGFS*TLGLPH
Trigger: ATGTGGCAGCCCAAGGGTTCAGGAAAAGCCCGACAG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTTCCCGCCACTTCTCTaGCACTGTGATCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQFPPLL*HCDLPN
Trigger: ATTGGGAAGATCACAGTGTCAGAGAAGTGGCGGGAA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGGAAGTTCTCCAGCTTaGCTGCTGCGGGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILGSSPA*LLRGLS
Trigger: AGACAGACCCCGCAGCAGTCAAGCTGGAGAACTTCC...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAACTGTGCGAAGGTCATaGGGGGCTCGGGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPTVRRS*GARAAP
Trigger: GGGAGCTGCCCGAGCCCCTCATGACCTTCGCACAGT...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCAGGTGACATGCGGTTaGCATCCTCGAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLQVTCG*HPRAGP
Trigger: TGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCCAGCCTCCAGTTGGCTaGTCTCCTCCATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFQPPVG*SPPSSL
Trigger: AAGTGAAGATGGAGGAGATCAGCCAACTGGAGGCTG...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPEARVR*PKCPKL
Trigger: GAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTGGCGTCCGGAAGAGTaGCAGCCACATTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQWRPEE*QPHSSL
Trigger: GAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGACCCGTGAGCAGTCCTaGGTCGCTGGCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKTREQS*VAGSYS
Trigger: AGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGT...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTGCCCTCCTGACCCGTaGGCAGTCCTGAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHCPPDP*AVLSRW
Trigger: CCAGCGACTCAGGACTGCTCACGGGTCAGGAGGGCA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACCAGGTTGTCCCTGTTaGCCTATAGGGAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPPGCPC*PIGRSD
Trigger: GTCAGACCTCCCTATAGGTCAACAGGGACAACCTGG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTCCGGCAGCCGGTAGGTaGTGTCTTGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPPAAGR*CLASPP
Trigger: AGGAGGAGAAGCAAGACATCACCTACCGGCTGCCGG...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594824.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCTTTCACACTCATCCTaGCGGCCGCCTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLLSHSS*RPPGFS
Trigger: GCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCCCGGCGGCCCGAGCTaGCTGCCTCTTTCACACTCA +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHPGGPS*LPLSHS
Trigger: TGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTCAAAGTCCGCCTGCTaGCGTGGCAGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLASKSAC*RGRRPR
Trigger: GCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGTCATCAAAGTCCGCCTaGTGCCGTGGCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLSSKSA*CRGRRP
Trigger: TGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGA...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTCCAGCTTGCCCAGCTaGTGGTTCTCATACATCTTC +
Preference number: 4 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQSSLPS*WFSYIF
Trigger: GAAGATGTATGAGAACCAGCAGCTGGGCAAGCTGGA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCACCCGAGATCACGATaGACTGGTTCACGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSHPRSR*TGSRAS
Trigger: GGAAGCGCGTGAACCAGTGCATCGTGATCTCGGGTG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTGGTGCTCTGGGTCTTaGCGGAGCCGCTCTCACCCG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAWCSGS*RSRSHP
Trigger: CGGGTGAGAGCGGCTCCGGCAAGACCCAGAGCACCA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTGGACAGGCACGAGACTaGCTCTTCCACGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIGQARD*LFHVLL
Trigger: AAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCC...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCAGGGCTGCTCATACCTaGAGCCTTTTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSRAAHT*SLFGPL
Trigger: GAGAGGGCCGAAAAGGCTGCAGGTATGAGCAGCCCT...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCAGGGCTGCTCATACCTaGAGCCTTTTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPRAAHT*SLFGPL
Trigger: GAGAGGGCCGAAAAGGCTGCAGGTATGAGCAGCCCT...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTGTTTTTCCGAAGGGGTaGTGGCTCCTCTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIVFPKG*WLLLAA
Trigger: AGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAAC...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCTCCGCCTTCCCCAGTaGCTCCAAGAGCTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQLRLPQ*LQELVK
Trigger: CTTAACAAGCTCTTGGAGGCACTGGGGAAGGCGGAG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCAGGAGCACCTGGAACTaGTCGGTGAAATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPRSTWN*SVKSWN
Trigger: GTTCCAGGATTTCACCGAGCAGTTCCAGGTGCTCCT...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGTCTCCTGCAGGGCTTaGCGCTCCGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEVSCRA*RSVSFR
Trigger: CCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGAC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCTCTTGCGCTGCAGGTaGCCCCGACACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHLLRCR*PRHRLC
Trigger: GCAGAGCCTGTGTCGGGGGCACCTGCAGCGCAAGAG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGGGCACTCTCCTCCTTaGAGGACTGGATGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTGHSPP*RTGCVC
Trigger: ACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCC...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGGGCACTCTCCTCCTTaGAGGACTGGATGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWGHSPP*RTGCVC
Trigger: ACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCAGAGACCTTGCCAACTaGCATGGCCTGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSRDLAN*HGLGLL
Trigger: GAGCAACCCCAGGCCATGGCAGTTGGCAAGGTCTCT...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATGGCTGCCACATGGTTTaGTCTTGTCCTCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYGCHMV*SCPRGS
Trigger: AGACCCCCGAGGACAAGAGCAAACCATGTGGCAGCC...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGACCTGAACCCTTGGGCTaGCACATGGTTTGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERPEPLG*HMVCSC
Trigger: ACAAGAGCAAACCATGTGGCAGCCCAAGGGTTCAGG...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCCGTCCGTGGTTTCTaGTGCAGGCTGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPSVRGF*CRLSLG
Trigger: GCCAAGGCTCAGCCTGCAGCAGAAACCACGGACGGA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCTCCAGCTTGACTGCTaGGGGGTCTGTCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMELQLDC*GVCLQR
Trigger: GCGCTGCAGACAGACCCCGCAGCAGTCAAGCTGGAG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGGAAGGCGATACTCTCTaGAGCCTCCAGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWEGDTL*SLQLAD
Trigger: ATCAGCCAACTGGAGGCTGCAGAGAGTATCGCCTTC...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGCAGGAGCGAAAGCCTaGGGAAGGCGATACTCTCTG +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPAGAKA*GRRYSL
Trigger: CAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCTGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLCTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCAGGTGGAGATGTGGTaGTCCCCACAGGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLQVEMW*SPQVRP
Trigger: TGGACGCACCTGTGGGGAGCACCACATCTCCACCTG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGTGGCCTAGTGGCTTCTaGTCTGACAGCTCACGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWWPSGF*SDSSRP
Trigger: TGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGCACAGGCGAGTCGTTaGCGTCCAGCACCCATTCCT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPAQASR*RPAPIP
Trigger: AGGAATGGGTGCTGGACGCCAACGACTCGCCTGTGC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCAGGAAGTTGGTGCTCTaGGTCTTGCCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLRKLVL*VLPEPL
Trigger: GAGCGGCTCCGGCAAGACCCAGAGCACCAACTTCCT...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGAGGGCGGTGAGGCAGTaGATGAGGAAGTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGRAVRQ*MRKLVL
Trigger: GAGCACCAACTTCCTCATCCACTGCCTCACCGCCCT...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAAATCTGCTTCTTGGTaGCGGGGAGGAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGKSASW*RGGSPP
Trigger: TGGTGGGCTTCCTCCCCGCCACCAAGAAGCAGATTT...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGTCTGGCTCGTGGCGTaGGGGAAGTTGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEVWLVA*GKLLSS
Trigger: CGAGGAGAGCAACTTCCCCCACGCCACGAGCCAGAC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCCTGGATGATGAAAGCTaGCTCCATGACCGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSLDDES*LHDRGA
Trigger: GGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAG...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATTGTTAAGGGATGTCTaGAACTGGGCGCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPLLRDV*NWALML
Trigger: AAGCATCAGCGCCCAGTTCCAGACATCCCTTAACAA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTTGGGCAGGAGCACCTaGAACTGCTCGGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGLGRST*NCSVKS
Trigger: GGATTTCACCGAGCAGTTCCAGGTGCTCCTGCCCAA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACCCCTCCATGAGGCCTaGAGGTACACGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPPLHEA*RYTAAC
Trigger: GCAGGCTGCCGTGTACCTCCAGGCCTCATGGAGGGG...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGGCTTCTCCCGGCTGCTaGGGACTTTCTCGTGACTTT +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQASPGC*GLSRDF
Trigger: AAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGC...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCTCACCCCTTGCTCCTaGGTGACCCTTCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILLTPCS*VTLLEG
Trigger: ACCTTCCAGAAGGGTCACCCAGGAGCAAGGGGTGAG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCTGAGGTCCAGGGACTaGCTGAGCATGGCACTAGGG +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLLRSRD*LSMALG
Trigger: CCCTAGTGCCATGCTCAGCCAGTCCCTGGACCTCAG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGGACGGGAGGAGCTTaGAGACGTCGCTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEGTGGA*RRRSWR
Trigger: TCTCCACGAGCGACGTCTCCAAGCTCCTCCCGTCCC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACCTGCAGGCTGAGCCTTaGCCAGGGACGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHLQAEP*PGTGGA
Trigger: AGCTCCTCCCGTCCCTGGCCAAGGCTCAGCCTGCAG...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGGAGGATGCGTCGCCTaGCTTCTTCTTCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPGGCVA*LLLLDS
Trigger: GCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCCTTCTTCATGGTGGTaGCTTCCAGCACCACGTGCC +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILPSSWW*LPAPRA
Trigger: GGCACGTGGTGCTGGAAGCCACCACCATGAAGAAGG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCACTTCCCTTTGCCTCCTaGTTCCTTGGTGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPLPFAS*FLGALL
Trigger: GAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAG...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGTTGGTGTCCTTCTaGCCACGCTCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLRLVSF*PRSVAR
Trigger: CCTGGCCACTGAGCGTGGCCAGAAGGACACCAACCT...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGATGCACGCACTTCTTGTaGCAGGTCATCTTGCACACG +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERCTHFL*QVILHT
Trigger: CGTGTGCAAGATGACCTGCCACAAGAAGTGCGTGCA...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGCCAGGCTCAACGCCTaGCTCGCCCTTCCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHARLNA*LALPPV
Trigger: TACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACGCACACGCCGAAGTaGCCAGGCTCAACGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLATHTPK*PGSTPG
Trigger: GCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGT...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCCGAGGCCTTGTCGCTaGTCAGGCTGTCTACGCACA +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLPRPCR*SGCLRT
Trigger: TGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCACCCCTGTGATGGCGTaGATGGGGAAGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSTPVMA*MGKFSS
Trigger: GCTGGAGAACTTCCCCATCCACGCCATCACAGGGGT...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCACCCCTGTGATGGCGTaGATGGGGAAGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPTPVMA*MGKFSS
Trigger: GCTGGAGAACTTCCCCATCCACGCCATCACAGGGGT...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGTTGTGGTTGGCTTCTaGAAGGTGCTCCAGGACGGC +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPVVVGF*KVLQDG
Trigger: GCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAAC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCGCCACCTTGACAAGGTaGAAGATGAGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFATLTR*KMSLSR
Trigger: CCTGGAGAGACTCATCTTCCACCTTGTCAAGGTGGC...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGGACGTCCTTCATGCTaGTCAGCGGGTCCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPGRPSC*SAGPSC
Trigger: ACAACTCGGACCCGCTGACCAGCATGAAGGACGTCC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGGACGTCCTTCATGCTaGTCAGCGGGTCCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHGRPSC*SAGPSC
Trigger: ACAACTCGGACCCGCTGACCAGCATGAAGGACGTCC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGAGGGCAGGCCTGGTaGGAGCTTGATGTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEGGQAW*ELDVGR
Trigger: ACGGCCAACATCAAGCTCCCACCAGGCCTGCCCTCC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACCCGAGTACCTCCGCTTaGCCCCAGGTGGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHPSTSA*PQVAGH
Trigger: ATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGG...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGGCCTCAGACGCGCAGTaGCCTAGTGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLASDAQ*PSGFCS
Trigger: AGAGCAGAAGCCACTAGGCCACTGCGCGTCTGAGGC...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPATFKSP*HVRSMV
Trigger: CACCATGGACCTCACGTGCCAGGGAGACTTGAATGT...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACTTGTCCCAGATTTGTaGCCACGTGTCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTLVPDL*PRVQVS
Trigger: AGACACCTGGACACGTGGCCACAAATCTGGGACAAG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGCAGGAAGCGGTGCTTaGGGTTCTTCAGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPAGSGA*GSSGGC
Trigger: GCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCTCTCCATGGCCTGCTTaGGCCTCTCAAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGSPWPA*ASQSHA
Trigger: AGCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGA...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCGATGTTGTGCCACGTaGTCCCCTCGCCCTGATATT +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKRCCAT*SPRPDI
Trigger: AATATCAGGGCGAGGGGATCACGTGGCACAACATCG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCCTCATGTTGCTGTTTaGACTTGGCCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMPHVAV*TWPAGS
Trigger: AGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCGGAAGTCCTTGATCTaGTATTTCACCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWRKSLI*YFTFPA
Trigger: CGCAGGGAAGGTGAAATATCAGATCAAGGACTTCCG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCTGGAACTGCTCGGTaGAATCCTGGAACGTGTACT +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQPGTAR*NPGTCT
Trigger: AGTACACGTTCCAGGATTTCACCGAGCAGTTCCAGG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCGAGATCATCTGGCTaGAGCTCTTGCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLPRSSG*SSCAAG
Trigger: ACCTGCAGCGCAAGAGCTTCAGCCAGATGATCTCGG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCTGGGGACTTTCTCGTaGCTTTCAGCCGCCACGGTT +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLLGTFS*LSAATV
Trigger: AACCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCTTCCCGCCACTTCTCTaGCACTGTGATCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFFPPLL*HCDLPN
Trigger: ATTGGGAAGATCACAGTGTCAGAGAAGTGGCGGGAA...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGGTCATTTATCTTGTTaGGCAGGAACTCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEGHLSC*AGTRPG
Trigger: ACCTGGACGAGTTCCTGCTCAACAAGATAAATGACC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATCAGTGGCCAGGTTGCTaGCGACGATCTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYQWPGC*RRSGSS
Trigger: AGAACTACCAGATCGTCGTCAGCAACCTGGCCACTG...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCAGGTGACATGCGGTTaGCATCCTCGAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEQVTCG*HPRAGP
Trigger: TGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATTCCTCATCTGCTCCTTaGTCAGCATCTCCACGCACG +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYSSSAP*SASPRT
Trigger: CGTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGA...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCCTCCTTCTCCTCCTTaGTGGACTGGATCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGPPSPP*WTGSVQ
Trigger: TTGAACGGATCCAGTCCATCAAGGAGGAGAAGGAGG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCCGGCAGCCGGTAGGTaGTGTCCTCCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHPAAGR*CPPSPP
Trigger: AGGAGGAGAAGGAGGACATCACCTACCGGCTGCCGG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGGGTCTGCCCCGGGCGTaGTGTACACGGAATGTATCT +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLGLPRA*CTRNVS
Trigger: AGATACATTCCGTGTACATCACGCCCGGGGCAGACC...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACAACCACAGCAGGGTCTaGGCCTCAGACGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHNHSRV*ASDAQW
Trigger: CCACTGCGCGTCTGAGGCTCAGACCCTGCTGTGGTT...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTGGCGTCCGGAAGAGTaGCAGCCACATTCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHWRPEE*QPHSSL
Trigger: GAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTACCCGTGAGCAGTCCTaGGTCGCTGGCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPTREQS*VAGSYS
Trigger: AGAATAGGAGCCAGCGACTCAGGACTGCTCACGGGT...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCAGGTTGTCCCTGTTaGCCTATAGGGAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGPGCPC*PIGRSD
Trigger: GTCAGACCTCCCTATAGGTCAACAGGGACAACCTGG...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCCATAGCAGCACCCGGTaGACAGGCGAGTCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAHSSTR*TGESLA
Trigger: CGCCAACGACTCGCCTGTGCACCGGGTGCTGCTATG...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCTTGATGGTTCCATCTaGGTTGCGCTCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKLDGSI*VALLQQ
Trigger: CTGCTGCAGGAGCGCAACGCAGATGGAACCATCAAG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTTGATGGTTCCATCTaGGTTGCGCTCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLDGSI*VALLQQ
Trigger: CTGCTGCAGGAGCGCAACGCAGATGGAACCATCAAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGCCTGCGCCACCAGCTaGATATGCACGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHACATS*ICTYLM
Trigger: CATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCACCCGAGATCACGATaGACTGGTTCACGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLHPRSR*TGSRAS
Trigger: GGAAGCGCGTGAACCAGTGCATCGTGATCTCGGGTG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTGTTTTTCCGAAGGGGTaGTGGCTCCTCTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGVFPKG*WLLLAA
Trigger: AGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAAC...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACCGGGGGTCCTCGCCCTaGCAGGGCAATCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHRGSSP*QGNPLM
Trigger: CATCAAAGGATTGCCCTGGCAGGGCGAGGACCCCCG...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACTGAAGCTCTTGCGCTaGAGGTGCCCCCGACACAGG +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPLKLLR*RCPRHR
Trigger: CCTGTGTCGGGGGCACCTGCAGCGCAAGAGCTTCAG...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTTTCTTCAGAGACCTTaGCAACTGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGFLQRP*QLPWPG
Trigger: CCCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGTCCGTCCGTGGTTTCTaGTGCAGGCTGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMESVRGF*CRLSLG
Trigger: GCCAAGGCTCAGCCTGCAGCAGAAACCACGGACGGA...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCTCCTGGTTCCTTGGTaGGCTTCTCACCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLLLVPW*ASHLQR
Trigger: ACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCATCTTGCACACGCTaGAGAGCAGGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKSSCTR*RAGPCP
Trigger: TGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATTCATCTTGCACACGCTaGAGAGCAGGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYSSCTR*RAGPCP
Trigger: TGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGA...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTTGTATTTCCTCATCTaGTCCTTGATCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGALYFLI*SLISIS
Trigger: GGAGATGCTGATCAAGGAGCAGATGAGGAAATACAA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCTGCACTGGCAGGTCTaGCCCGGGCGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHLHWQV*PGRDVH
Trigger: GTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCGGCCGTCCTCGGACATaGAGACTTTGTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLGRPRT*RLCQLW
Trigger: CCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGTGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMECTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTGGCCTAGTGGCTTCTaGTCTGACAGCTCACGTCCA +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHWPSGF*SDSSRP
Trigger: TGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTGGCCTAGTGGCTTCTaGTCTGACAGCTCACGTCCA +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKWPSGF*SDSSRP
Trigger: TGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCCATTGGCCAGGTGGCTaGCCCCCGGAGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAHWPGG*PPETCV
Trigger: GACACATGTCTCCGGGGGGCAGCCACCTGGCCAATG...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTGGTGCTGTCCTTGGTaGCAGTCACGCGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHWCCPW*QSRGTR
Trigger: CCTCGTGCCGCGTGACTGCCACCAAGGACAGCACCA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGAGATCACGATGCACTaGTTCACGCGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKEITMH*FTRFLS
Trigger: GCTCAGGAAGCGCGTGAACCAGTGCATCGTGATCTC...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGAGATCACGATGCACTaGTTCACGCGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSEITMH*FTRFLS
Trigger: GCTCAGGAAGCGCGTGAACCAGTGCATCGTGATCTC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCAAATCTGCTTCTTGGTaGCGGGGAGGAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPKSASW*RGGSPP
Trigger: TGGTGGGCTTCCTCCCCGCCACCAAGAAGCAGATTT...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTTGCCCAGGTACAGGATaGCCGAGAGGACGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGCPGTG*PRGRQK
Trigger: TTTTTGCCGTCCTCTCGGCCATCCTGTACCTGGGCA...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCATTCCCTGCGAAGTGCTaGATGATGAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPFPAKC*MMKAGS
Trigger: GGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAA...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGTTCCCTGCGAAGTGCTaGATGATGAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLFPAKC*MMKAGS
Trigger: GGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAA...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCAGGGCCACGATGTCTaGCCGCATGTAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSQGHDV*PHVVHV
Trigger: AACATGGACTACATGCGGCCAGACATCGTGGCCCTG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTTTCCGAAGGGGTGCTaGCTCCTCTTGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILFPKGC*LLLAAL
Trigger: AAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGCCGACTGAGGGACTaGAGAAGGCTACGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLASRLRD*RRLRGS
Trigger: GGACCCCCGTAGCCTTCTCCAGTCCCTCAGTCGGCT...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGGGTGCAGTAGGGACTTaGTGGTGCGGTCGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWGAVGT*WCGRAE
Trigger: CTCTGCACGACCGCACCACCAAGTCCCTACTGCACC...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGTGCTCGGTGAAATCCTaGAACGTGTACTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMCSVKS*NVYLAL
Trigger: CAGCGCCAAGTACACGTTCCAGGATTTCACCGAGCA...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCTTCAGGAAGACCTTaGTCTTCCCGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAPSGRP*SSRSGS
Trigger: ACTACCAGATCGGGAAGACCAAGGTCTTCCTGAAGG...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACCTTCAGGAAGACCTTaGTCTTCCCGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTPSGRP*SSRSGS
Trigger: ACTACCAGATCGGGAAGACCAAGGTCTTCCTGAAGG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGGGGACCTGTCACTTaGCTGCACCTCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHGGPVT*LHLRLR
Trigger: TCGGAGCCTGAGGTGCAGCCAAGTGACAGGTCCCCC...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACCAACTGCCATGGCCTaGGGTTGCTCTGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPPTAMA*GCSVGC
Trigger: GCAGCCCACAGAGCAACCCCAGGCCATGGCAGTTGG...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCCTTGCCAACTGCCATaGCCTGGGGTTGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWPCQLP*PGVALW
Trigger: CCACAGAGCAACCCCAGGCCATGGCAGTTGGCAAGG...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTCCAGGCCCTTCTTCATaGTGGTGGCTTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPPGPSS*WWLPAP
Trigger: TGGTGCTGGAAGCCACCACCATGAAGAAGGGCCTGG...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCTTCCCTTTGCCTCCTaGTTCCTTGGTGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILLPFAS*FLGALL
Trigger: GAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCTTCCCTTTGCCTCCTaGTTCCTTGGTGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPLPFAS*FLGALL
Trigger: GAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGCTTCTCCAGCACGATaGGCACCGAGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHASPAR*APRPCR
Trigger: GCGACAAGGCCTCGGTGCCCATCGTGCTGGAGAAGC...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCCTCTCCAGGGAGTTGTaGTTGGCTTCTGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSLSREL*LASGRC
Trigger: GCACCTTCCAGAAGCCAACCACAACTCCCTGGAGAG...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATCCTCCTTGATGGACTaGATCCGTTCAATGAGAATC +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPSSLMD*IRSMRI
Trigger: GATTCTCATTGAACGGATCCAGTCCATCAAGGAGGA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGAGACTTTGTCAGCTGTaGCTCTCAGCCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLQPLASGRVTATFKSPWRLCQL*LSAIGL
Trigger: CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCT...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACCCGCAGGTGGAGATGTaGTGCTCCCCACAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHPQVEM*CSPQVR
Trigger: ACGCACCTGTGGGGAGCACCACATCTCCACCTGCGG...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTGTCCAAAACTCTCATaGAGGGTCCCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQCPKLS*RVPAHW
Trigger: CCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGTFKSP*HVRSMV
Trigger: CACCATGGACCTCACGTGCCAGGGAGACTTGAATGT...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGCAGTCCTGAGTCGCTaGCTCCTATTCTGTCACACG +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILAVLSR*LLFCHT
Trigger: CGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGTCTCCATGGCCTGCTTaGGCCTCTCAAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGSPWPA*ASQSHA
Trigger: AGCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGA...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCGATGTTGTGCCACGTaGTCCCCTCGCCCTGATATT +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLRCCAT*SPRPDI
Trigger: AATATCAGGGCGAGGGGATCACGTGGCACAACATCG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCTCATGTTGCTGTTTaGACTTGGCCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGPHVAV*TWPAGS
Trigger: AGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGG...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCTTTACTTTTCAGGATaGAGGCGCGGGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGLYFSG*RRGVSG
Trigger: TCCAGAAACCCCGCGCCTTCATCCTGAAAAGTAAAG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCGTTTGTTCTGGAACTTaGCGTGCTCCAGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGVCSGT*RAPALF
Trigger: AAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAAC...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCTGTCGGGCTTTTCCTaGACCCTTGGGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMELSGFS*TLGLPH
Trigger: ATGTGGCAGCCCAAGGGTTCAGGAAAAGCCCGACAG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGTGGTGTAGCCACGGGTaGACTCATCTAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKWCSHG*THLAVT
Trigger: AGTCACTGCTAGATGAGTTCACCCGTGGCTACACCA...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTTGGTGTAGCCACGGGTaGACTCATCTAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGWCSHG*THLAVT
Trigger: AGTCACTGCTAGATGAGTTCACCCGTGGCTACACCA...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCTTCCGCTTCTTCTTCTaGGCTTTGCTCTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFFRFFF*ALLCFT
Trigger: AGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAA...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCAGCCTCCAGTTGGCTaGTCTCCTCCATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPQPPVG*SPPSSL
Trigger: AAGTGAAGATGGAGGAGATCAGCCAACTGGAGGCTG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAACGAAAACCCCAGTTTaGGAGGCCATGGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTTKTPV*EAMEHF
Trigger: AAAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCACTGGATCCGTTCAATaGGAATCTCCTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SLLQPLASGRVTATFKSPTGSVQ*ESPFPG
Trigger: ACCGGGAAAAGGAGATTCTCATTGAACGGATCCAGT...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCCCTCCTTCTCCTCCTTaGTGGACTGGATCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSPPSPP*WTGSVQ
Trigger: TTGAACGGATCCAGTCCATCAAGGAGGAGAAGGAGG...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR TCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTTCTGGATCCTTCTCTaGGGGCCGAACACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHFWILL*GPNTSS
Trigger: AGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFTSRHS*AFDSGS
Trigger: GGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGT...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCTTGCTTCTCCTCCTTaGTGGACTGGATCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGLASPP*WTGSVQ
Trigger: TTGAACGGATCCAGTCCATCAAGGAGGAGAAGCAAG...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS-3UTR TCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCCCGGCAGCCGGTAGGTaGTGTCTTGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAPAAGR*CLASPP
Trigger: AGGAGGAGAAGCAAGACATCACCTACCGGCTGCCGG...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000594824.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGCGGCCCGAGCTGCCTaGCTCTTTCACACTCATCCT +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHAARAA*LFHTHP
Trigger: AGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGC...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCTCCAGCTTGCCCAGCTaGTGGTTCTCATACATCTTC +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLSSLPS*WFSYIF
Trigger: GAAGATGTATGAGAACCAGCAGCTGGGCAAGCTGGA...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCACCATCTCCATGGCCTaGTTGAGCCTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGTISMA*LSLSKS
Trigger: TGACTTTGAGAGGCTCAAGCAGGCCATGGAGATGGT...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGTTCACCTTCAGAAGCTaGGACAGGGTGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLFTFRS*DRVSST
Trigger: GGTGCTGGACACCCTGTCGCAGCTTCTGAAGGTGAA...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCTTCTTGTTGAGGAGTaGGTGGTTGATCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKLLVEE*VVDPQH
Trigger: GTGCTGCGGATCAACCACGCACTCCTCAACAAGAAG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTTCTTGTTGAGGAGTaGGTGGTTGATCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLLVEE*VVDPQH
Trigger: GTGCTGCGGATCAACCACGCACTCCTCAACAAGAAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCTTCTTGTTGAGGAGTaGGTGGTTGATCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPLLVEE*VVDPQH
Trigger: GTGCTGCGGATCAACCACGCACTCCTCAACAAGAAG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACACCTTCCCTGCGAAGTaGTGGATGATGAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHTFPAK*WMMKAG
Trigger: GCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGT...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATACCTTCCCTGCGAAGTaGTGGATGATGAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYTFPAK*WMMKAG
Trigger: GCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGT...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTTTGGGCACCAGGGCTaGTCATACCTGCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILFGHQG*SYLQPF
Trigger: AAAAGGCTGCAGGTATGAGCAGCCCTGGTGCCCAAA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCTCCGCCTTCCCCAGTaGCTCCAAGAGCTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLLRLPQ*LQELVK
Trigger: CTTAACAAGCTCTTGGAGGCACTGGGGAAGGCGGAG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAGGAGCACCTGGAACTaGTCGGTGAAATCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYRSTWN*SVKSWN
Trigger: GTTCCAGGATTTCACCGAGCAGTTCCAGGTGCTCCT...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACATTCTCTTCTGCCTTCTaGTTCTCCGAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTFSSAF*FSEIIW
Trigger: CCAGATGATCTCGGAGAAGCAGAAGGCAGAAGAGAA...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGACCTGTCACTTGGCTaGACCTCAGGCTCCGATGCC +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLADLSLG*TSGSDA
Trigger: GGCATCGGAGCCTGAGGTGCAGCCAAGTGACAGGTC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACACGCTTCTCCCGGCTaGTGGGGACTTTCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPHASPG*WGLSRD
Trigger: GTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTG...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTTTCTTCAGAGACCTTaGCAACTGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHFLQRP*QLPWPG
Trigger: CCCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGCTGCCACATGGTTTaGTCTTGTCCTCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEGCHMV*SCPRGS
Trigger: AGACCCCCGAGGACAAGAGCAAACCATGTGGCAGCC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGTCCGTGGTTTCTGCTaGAGGCTGAGCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAVRGFC*RLSLGQ
Trigger: CTGGCCAAGGCTCAGCCTGCAGCAGAAACCACGGAC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGAAGGCGATACTCTCTaGAGCCTCCAGTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPEGDTL*SLQLAD
Trigger: ATCAGCCAACTGGAGGCTGCAGAGAGTATCGCCTTC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCATGCACTTGGGGCCGGTaGCCACCTCACGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPCTWGR*PPHVTL
Trigger: AAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCA...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCGGTGTACAGGCCGTGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATGCTGCCAATGTTCGCCTaGTCGGACTCTCATCTATGT +
Preference number: 4 (lower is better)
Translates to: SVYRPCISTCSRSFSSTMLPMFA*SDSHLC
Trigger: ACATAGATGAGAGTCCGAGCAGGCGAACATTGGCAG...CATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCACGGCCTGTACACCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CCA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCACATCTTCACGTACTTaGGGTTGTAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AKSSLLQPLASGRVTATFTSSRT*GCRWAG
Trigger: TCCTGCCCATCTACAACCCCAAGTACGTGAAGATGT...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCGAGATCACGATGCACTaGTTCACGCGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLEITMH*FTRFLS
Trigger: GCTCAGGAAGCGCGTGAACCAGTGCATCGTGATCTC...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCAAAAATCTGCTTCTTaGTGGCGGGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILQKSAS*WRGGSP
Trigger: TGGGCTTCCTCCCCGCCACCAAGAAGCAGATTTTTG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCATTGTTGAGGAGTGCGTaGTTGATCCGCAGCACAATC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPLLRSA*LIRSTI
Trigger: GATTGTGCTGCGGATCAACCACGCACTCCTCAACAA...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTTCTTGCTGATGAGATaGATGCAGCCGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAFLLMR*MQPTLS
Trigger: AGACAATGTCGGCTGCATCCATCTCATCAGCAAGAA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTTTCCGAAGGGGTGCTaGCTCCTCTTGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPFPKGC*LLLAAL
Trigger: AAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGAGGGATGTCTGGAACTaGGCGCTGATGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWRDVWN*ALMLGG
Trigger: GCCACCAAGCATCAGCGCCCAGTTCCAGACATCCCT...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACATCCTCCTTGCAGGACTaGATGTGTTTGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTSSLQD*MCLFWN
Trigger: GTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGA...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAACCTGGGGTTGCTCTGTaGGCTGCTTTTGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKPGVAL*AAFEMC
Trigger: ACACATCTCAAAAGCAGCCCACAGAGCAACCCCAGG...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCCTGGCTTCTTCTTCTaGACAGCTGGCTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGPGFFF*TAGFFA
Trigger: TGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGCCCTTCTTCATGGTaGTGGCTTCCAGCACCACGT +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEGPSSW*WLPAPR
Trigger: ACGTGGTGCTGGAAGCCACCACCATGAAGAAGGGCC...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGCCACCTTGACAAGGTaGAAGATGAGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKATLTR*KMSLSR
Trigger: CCTGGAGAGACTCATCTTCCACCTTGTCAAGGTGGC...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCCAGTTTGAGAGGCCATaGAGCATTTTGTCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLQFERP*SILSQE
Trigger: CTCCTGCGACAAAATGCTCCATGGCCTCTCAAACTG...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATTACACGGAATGTATCTaGTCCGGGCGGCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHYTECI*SGRRAG
Trigger: ACCTGCCCGCCGCCCGGACCAGATACATTCCGTGTA...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACAGGGCGCCCTGCACTaGCAGGTCTGCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTQGALH*QVCPGR
Trigger: ACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGGCAGTCCTGAGTCGCTaGCTCCTATTCTGTCACACG +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLAVLSR*LLFCHT
Trigger: CGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGCAGGAAGCGGTGCTTaGGGTTCTTCAGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHAGSGA*GSSGGC
Trigger: GCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGGCGCTCTTCCTCGCTaGCCCCAAGTAACAAATAAT +
Preference number: 4 (lower is better)
Translates to: SPESLAPILSHGVGSAKSGALPR*PQVTNN
Trigger: ATTATTTGTTACTTGGGGTCAGCGAGGAAGAGCGCC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTTTACTTTTCAGGATaGAGGCGCGGGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLYFSG*RRGVSG
Trigger: TCCAGAAACCCCGCGCCTTCATCCTGAAAAGTAAAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGTTCCCGCCACTTCTCTaGCACTGTGATCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKFPPLL*HCDLPN
Trigger: ATTGGGAAGATCACAGTGTCAGAGAAGTGGCGGGAA...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCACTGGATCCGTTCAATaGGAATCTCCTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLTGSVQ*ESPFPG
Trigger: ACCGGGAAAAGGAGATTCTCATTGAACGGATCCAGT...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPTSRHS*AFDSGS
Trigger: GGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGT...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCTTGCTTCTCCTCCTTaGTGGACTGGATCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKLASPP*WTGSVQ
Trigger: TTGAACGGATCCAGTCCATCAAGGAGGAGAAGCAAG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594824.5
ENST00000597073.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGCACATAACATTTGGTaGCGTCCAGCCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAAHNIW*RPAAGW
Trigger: CCAGCCTGCGGCTGGACGGCACCAAATGTTATGTGC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCTTGATGGTTCCATCTaGGTTGCGCTCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMELDGSI*VALLQQ
Trigger: CTGCTGCAGGAGCGCAACGCAGATGGAACCATCAAG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGCCACCAGCTGCATATaGACGTACTTGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPATSCI*TYLMVP
Trigger: TGGAACCATCAAGTACGTGCATATGCAGCTGGTGGC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCACCATCTCCATGGCCTaGTTGAGCCTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPTISMA*LSLSKS
Trigger: TGACTTTGAGAGGCTCAAGCAGGCCATGGAGATGGT...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTTCACCTTCAGAAGCTaGGACAGGGTGTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWFTFRS*DRVSST
Trigger: GGTGCTGGACACCCTGTCGCAGCTTCTGAAGGTGAA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTACCTTCCCTGCGAAGTaGTGGATGATGAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPTFPAK*WMMKAG
Trigger: GCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGT...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCATATTTCACCTTCCCTaGGAAGTGCTGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACIFHLP*EVLDDE
Trigger: TTCATCATCCAGCACTTCGCAGGGAAGGTGAAATAT...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGTTGGTGGTGCGGTCGTaGAGAGTCATGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLLVVRS*RVMLMM
Trigger: CATCATCAGCATGACTCTGCACGACCGCACCACCAA...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGTAGGGACTTGGTGGTaGGGTCGTGCAGAGTCATGC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHVGTWW*GRAESC
Trigger: GCATGACTCTGCACGACCGCACCACCAAGTCCCTAC...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTGGCTTTTTCTTCTTGTaGAGGTGCAGTAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIGFFFL*RCSRDL
Trigger: CAAGTCCCTACTGCACCTGCACAAGAAGAAAAAGCC...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGGGCTTTTTCTTCTTGTaGAGGTGCAGTAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWGFFFL*RCSRDL
Trigger: CAAGTCCCTACTGCACCTGCACAAGAAGAAAAAGCC...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGGGGCACTCTCCTCCTTaGAGGACTGGATGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLGHSPP*RTGCVC
Trigger: ACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCC...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAAGAGACCTTGCCAACTaGCATGGCCTGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPRDLAN*HGLGLL
Trigger: GAGCAACCCCAGGCCATGGCAGTTGGCAAGGTCTCT...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCCCTGAACCCTTGGGCTaGCACATGGTTTGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLPEPLG*HMVCSC
Trigger: ACAAGAGCAAACCATGTGGCAGCCCAAGGGTTCAGG...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGAAGTCGCCGTACTGTaGGAAGGTCATGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHEVAVL*EGHEGL
Trigger: GAGCCCCTCATGACCTTCGCACAGTACGGCGACTTC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGCAGGAGCGAAAGCCTaGGGAAGGCGATACTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAAGAKA*GRRYSL
Trigger: CAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGCAGCATGTGCAAAAATaGACATTGGCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKQHVQK*TLARWL
Trigger: CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTG...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCAACATCTTCACGTACTTaGGGTTGTAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPTSSRT*GCRWAG
Trigger: TCCTGCCCATCTACAACCCCAAGTACGTGAAGATGT...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCAGCTTGCCCAGCTGCTaGTTCTCATACATCTTCACG +
Preference number: 4 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPSLPSC*FSYIFT
Trigger: CGTGAAGATGTATGAGAACCAGCAGCTGGGCAAGCT...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTCAAAAATCTGCTTCTTaGTGGCGGGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPQKSAS*WRGGSP
Trigger: TGGGCTTCCTCCCCGCCACCAAGAAGCAGATTTTTG...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTTTCTTGCTGATGAGATaGATGCAGCCGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAFLLMR*MQPTLS
Trigger: AGACAATGTCGGCTGCATCCATCTCATCAGCAAGAA...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTTGTTAAGGGATGTCTaGAACTGGGCGCTGATGCTT +
Preference number: 4 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQLLRDV*NWALML
Trigger: AAGCATCAGCGCCCAGTTCCAGACATCCCTTAACAA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTGGATGTGTTTGTTCTaGAACTTGACGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLVASALTAHVQVIRETGWMCLF*NLTCSS
Trigger: GCTGGAGCACGTCAAGTTCCAGAACAAACACATCCA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTTCGCTCTCCGTCCGTaGTTTCTGCTGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAFALRP*FLLQAE
Trigger: CTCAGCCTGCAGCAGAAACCACGGACGGAGAGCGAA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGCCCTTCTTCATGGTaGTGGCTTCCAGCACCACGT +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHGPSSW*WLPAPR
Trigger: ACGTGGTGCTGGAAGCCACCACCATGAAGAAGGGCC...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCTCATCTAGCAGTGACTaGAAGAGGTTGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LVASALTAHVQVIRETGSSSSSD*KRLRTR
Trigger: CCTGGTCCTCAACCTCTTCCAGTCACTGCTAGATGA...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGTCATCTAGCAGTGACTaGAAGAGGTTGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGSSSSD*KRLRTR
Trigger: CCTGGTCCTCAACCTCTTCCAGTCACTGCTAGATGA...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGTGCACGCACTTCTTGTaGCAGGTCATCTTGCACACG +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLCTHFL*QVILHT
Trigger: CGTGTGCAAGATGACCTGCCACAAGAAGTGCGTGCA...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCCAGTTTGAGAGGCCATaGAGCATTTTGTCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPQFERP*SILSQE
Trigger: CTCCTGCGACAAAATGCTCCATGGCCTCTCAAACTG...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGAGACTTTGTCAGCTGTaGCTCTCAGCCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKRLCQL*LSAIGL
Trigger: CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCT...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCTTGTCCCAGATTTGTaGCCACGTGTCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLLVPDL*PRVQVS
Trigger: AGACACCTGGACACGTGGCCACAAATCTGGGACAAG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGGCGCTCTTCCTCGCTaGCCCCAAGTAACAAATAAT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPGALPR*PQVTNN
Trigger: ATTATTTGTTACTTGGGGTCAGCGAGGAAGAGCGCC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTAATCTTCAGGCTGCTTaGGCTGAAATTCTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGNLQAA*AEILGA
Trigger: AGCGCCAAGAATTTCAGCTCAAGCAGCCTGAAGATT...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATCAAGTTATGCTGGTTaGGGTAGAAATAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: APCPRFVATCPGVWGSGPSSYAG*GRNNLQ
Trigger: CTGAAGATTATTTCTACCTCAACCAGCATAACTTGA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCGTTTGTTCTGGAACTTaGCGTGCTCCAGCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLVCSGT*RAPALF
Trigger: AAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAAC...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGCTCATTGGCGTTGGTaGTCTGGCGGAACACCGATT +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHAHWRW*SGGTPI
Trigger: AATCGGTGTTCCGCCAGATCACCAACGCCAATGAGC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGGGTCATTTATCTTGTTaGGCAGGAACTCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGGHLSC*AGTRPG
Trigger: ACCTGGACGAGTTCCTGCTCAACAAGATAAATGACC...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTTCCGCTTCTTCTTCTaGGCTTTGCTCTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKFRFFF*ALLCFT
Trigger: AGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTCCTCATCTGCTCCTTaGTCAGCATCTCCACGCACG +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHSSSAP*SASPRT
Trigger: CGTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCAGCCTCCAGTTGGCTaGTCTCCTCCATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWQPPVG*SPPSSL
Trigger: AAGTGAAGATGGAGGAGATCAGCCAACTGGAGGCTG...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGACCATCTCCATGGCCTaGTTGAGCCTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLTISMA*LSLSKS
Trigger: TGACTTTGAGAGGCTCAAGCAGGCCATGGAGATGGT...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGGACAGGCACGAGACTaGCTCTTCCACGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAGQARD*LFHVLL
Trigger: AAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACATCCGGAACCAGCTCTaGAGCAGCAGGATTTTCCGC +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHIRNQL*SSRIFR
Trigger: GCGGAAAATCCTGCTGCTGCAGAGCTGGTTCCGGAT...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTTCTTCTTCTGAGCTTTaGTCTGCTTCACTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGSSSEL*SASLAR
Trigger: TCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGA...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACAGCCGGAGCTCCCGAGTaGGGTTGGCAGCACCCGACT +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTAGAPE*GWQHPT
Trigger: AGTCGGGTGCTGCCAACCGCACTCGGGAGCTCCGGC...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGATTGTATTTCCTCATCTaGTCCTTGATCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: QICGHVSRCLGEWAKPERLYFLI*SLISIS
Trigger: GGAGATGCTGATCAAGGAGCAGATGAGGAAATACAA...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGACATCTTCACGTACTTaGGGTTGTAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KSSLLQPLASGRVTATFKTSSRT*GCRWAG
Trigger: TCCTGCCCATCTACAACCCCAAGTACGTGAAGATGT...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTGCCCAGGTACAGGATaGCCGAGAGGACGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLACPGTG*PRGRQK
Trigger: TTTTTGCCGTCCTCTCGGCCATCCTGTACCTGGGCA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTGCTCGGTGAAATCCTaGAACGTGTACTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWCSVKS*NVYLAL
Trigger: CAGCGCCAAGTACACGTTCCAGGATTTCACCGAGCA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTCAATGGGCGTCTTCTaGGAACGGAGGTCATTTATC +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHSMGVF*ERRSFI
Trigger: GATAAATGACCTCCGTTCCCAGAAGACGCCCATTGA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTCAATGGGCGTCTTCTaGGAACGGAGGTCATTTATC +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILSMGVF*ERRSFI
Trigger: GATAAATGACCTCCGTTCCCAGAAGACGCCCATTGA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCCCAGGGAGTTGTGGTTaGCTTCTGGAAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLAPGSCG*LLEGAP
Trigger: TGGAGCACCTTCCAGAAGCCAACCACAACTCCCTGG...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGTCCTCCTTGATGGACTaGATCCGTTCAATGAGAATC +
Preference number: 4 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWSSLMD*IRSMRI
Trigger: GATTCTCATTGAACGGATCCAGTCCATCAAGGAGGA...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTGTCCAAAACTCTCATaGAGGGTCCCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWCPKLS*RVPAHW
Trigger: CCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCCCGGAAGTCCTTaGTCTGATATTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPSPGSP*SDISPS
Trigger: GGAAGGTGAAATATCAGATCAAGGACTTCCGGGAGA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTCTGGAACTGGGCGCTaGTGCTTGGTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLASGTGR*CLVAFS
Trigger: AGAAAAAGCCACCAAGCATCAGCGCCCAGTTCCAGA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTACGAAAACCCCAGTTTaGGAGGCCATGGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPTKTPV*EAMEHF
Trigger: AAAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGT...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCACCTCACGTCACTCTTaGGCTTTTGATTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLTSRHS*AFDSGS
Trigger: GGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGT...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGGCCACCAGCTGCATATaGACGTACTTGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWATSCI*TYLMVP
Trigger: TGGAACCATCAAGTACGTGCATATGCAGCTGGTGGC...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGTTCTCTTCTGCCTTCTaGTTCTCCGAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: GRCPPHVTLELLILDPSLFSSAF*FSEIIW
Trigger: CCAGATGATCTCGGAGAAGCAGAAGGCAGAAGAGAA...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGAAGGTTCCAGCATGTaGAAAAATGCACATTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHEGSSM*KNAHWP
Trigger: TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCAAAAATCTGCTTCTTaGTGGCGGGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHQKSAS*WRGGSP
Trigger: TGGGCTTCCTCCCCGCCACCAAGAAGCAGATTTTTG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTTGTTGAGGAGTGCGTaGTTGATCCGCAGCACAATC +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWLLRSA*LIRSTI
Trigger: GATTGTGCTGCGGATCAACCACGCACTCCTCAACAA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCTCCTCCTTGCAGGACTaGATGTGTTTGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLSSLQD*MCLFWN
Trigger: GTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGA...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGCATATGCACGTACTTaGTGGTTCCATCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPAYART*WFHLRC
Trigger: GCAACGCAGATGGAACCATCAAGTACGTGCATATGC...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGATATTTCACCTTCCCTaGGAAGTGCTGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGIFHLP*EVLDDE
Trigger: TTCATCATCCAGCACTTCGCAGGGAAGGTGAAATAT...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACAGTCTCCTGCAGGGCTTaGCGCTCCGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTVSCRA*RSVSFR
Trigger: CCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGAC...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTCTTCTTCTGAGCTTTaGTCTGCTTCACTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWSSSEL*SASLAR
Trigger: TCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTTGTATTTCCTCATCTaGTCCTTGATCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LCTWGRCPPHVTLELLILLYFLI*SLISIS
Trigger: GGAGATGCTGATCAAGGAGCAGATGAGGAAATACAA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTTGTATTTCCTCATCTaGTCCTTGATCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHLYFLI*SLISIS
Trigger: GGAGATGCTGATCAAGGAGCAGATGAGGAAATACAA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACTGCACTGGCAGGTCTaGCCCGGGCGTGATGTACAC +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTLHWQV*PGRDVH
Trigger: GTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGGAAGGTTCCAGCATGTaGAAAAATGCACATTGGCCA +
Preference number: 4 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLEGSSM*KNAHWP
Trigger: TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTC...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATAGCTTGCCCAGCTGCTaGTTCTCATACATCTTCACG +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHSLPSC*FSYIFT
Trigger: CGTGAAGATGTATGAGAACCAGCAGCTGGGCAAGCT...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTTCTTGCTGATGAGATaGATGCAGCCGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: TWGRCPPHVTLELLILDPFLLMR*MQPTLS
Trigger: AGACAATGTCGGCTGCATCCATCTCATCAGCAAGAA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCCTGGCTTCTTCTTCTaGACAGCTGGCTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHPGFFF*TAGFFA
Trigger: TGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATAATCTTCAGGCTGCTTaGGCTGAAATTCTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHNLQAA*AEILGA
Trigger: AGCGCCAAGAATTTCAGCTCAAGCAGCCTGAAGATT...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATACGAAAACCCCAGTTTaGGAGGCCATGGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHTKTPV*EAMEHF
Trigger: AAAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGT...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACACGCTTCTCCCGGCTaGTGGGGACTTTCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTHASPG*WGLSRD
Trigger: GTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACCTGGCTCTCGGTGGTaGACAGCTGGGGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTPGSRW*TAGGRC
Trigger: ACATCTACCCCCAGCTGTCCACCACCGAGAGCCAGG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACGCTGTACAGAGACTTaGCCATGGAGTCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTRCTET*PWSRGQ
Trigger: CTGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACAGGTGCAGTAGGGACTTaGTGGTGCGGTCGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTGAVGT*WCGRAE
Trigger: CTCTGCACGACCGCACCACCAAGTCCCTACTGCACC...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTCCTCCTTGCAGGACTaGATGTGTTTGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHSSLQD*MCLFWN
Trigger: GTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTCAAGTTATGCTGGTTaGGGTAGAAATAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHSSYAG*GRNNLQ
Trigger: CTGAAGATTATTTCTACCTCAACCAGCATAACTTGA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACTCCTGGTTCCTTGGTaGGCTTCTCACCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTLLVPW*ASHLQR
Trigger: ACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATCTGTCTGCAGCGCCTaGCGGAGCTCCCGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKSVCSA*RSSRVR
Trigger: CCGCACTCGGGAGCTCCGGCAGGCGCTGCAGACAGA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAACTCATCGCCGCCGGCTaGCTCCTCCTCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKLIAAG*LLLQQH
Trigger: GTGCTGCTGGAGGAGGAGGCAGCCGGCGGCGATGAG...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTAGGCCAGCACCCAGGATaGTCCTCTCGACGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVGQHPG*SSRRRW
Trigger: CCAGCGGCGTCGAGAGGACCATCCTGGGTGCTGGCC...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAACAGTTCCACGGCGCTaGCCAGCCGCTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKTVPRR*PAARRP
Trigger: TGGACGCCGAGCGGCTGGCCAGCGCCGTGGAACTGT...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATTCCTCCTTGATGGACTaGATCCGTTCAATGAGAATC +
Preference number: 4 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHSSLMD*IRSMRI
Trigger: GATTCTCATTGAACGGATCCAGTCCATCAAGGAGGA...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTCCTCCTTGATGGACTaGATCCGTTCAATGAGAATC +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHSSLMD*IRSMRI
Trigger: GATTCTCATTGAACGGATCCAGTCCATCAAGGAGGA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCTCAAGTTATGCTGGTTaGGGTAGAAATAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLSSYAG*GRNNLQ
Trigger: CTGAAGATTATTTCTACCTCAACCAGCATAACTTGA...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACATATTTCACCTTCCCTaGGAAGTGCTGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: PHVTLELLILDPSLRAEHIFHLP*EVLDDE
Trigger: TTCATCATCCAGCACTTCGCAGGGAAGGTGAAATAT...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACCAGCAGGCTCTCGGTaGTGGCCGACGTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVPAGSR*WPTSPS
Trigger: ACTCGGAGACGTCGGCCAGCACCGAGAGCCTGCTGG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACCAGGGAGTTGTGGTTaGCTTCTGGAAGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTPGSCG*LLEGAP
Trigger: TGGAGCACCTTCCAGAAGCCAACCACAACTCCCTGG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATCAGGCTGCTTGAGCTaGAATTCTTGGCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTSGCLS*NSWRSS
Trigger: GGAAGAGCGCCAAGAATTTCAGCTCAAGCAGCCTGA...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATTCTGGATCCTTCTCTaGGGGCCGAACACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTFWILL*GPNTSS
Trigger: AGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAA...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACCACAGGTGCGTCCATaGTTTGGGGGCTGCGTGCGA +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVPQVRP*FGGCVR
Trigger: TCGCACGCAGCCCCCAAATCATGGACGCACCTGTGG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATTTCTTCAGAGACCTTaGCAACTGCCATGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTFLQRP*QLPWPG
Trigger: CCCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAA...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTATGGCAGCACCCGACTTaGGGTAGAGGCCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVWQHPT*GRGPRC
Trigger: ACACCGAGGGCCTCTACCGCAAGTCGGGTGCTGCCA...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACTCCAGCTTGACTGCTaGGGGGTCTGTCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVLQLDC*GVCLQR
Trigger: GCGCTGCAGACAGACCCCGCAGCAGTCAAGCTGGAG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTAAAGGCGCGGGGTTTCTaGAGCCGACTGAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVKARGF*SRLRDW
Trigger: CCAGTCCCTCAGTCGGCTCCAGAAACCCCGCGCCTT...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATGTCCAAAACTCTCATaGAGGGTCCCAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTCPKLS*RVPAHW
Trigger: CCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACA...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACAACATTCAAGTCTCCCTaGCACGTGAGGTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTTFKSP*HVRSMV
Trigger: CACCATGGACCTCACGTGCCAGGGAGACTTGAATGT...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAACCCCGACACAGGCTCTaGAGGCGGATGATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKPRHRL*RRMMLC
Trigger: ACAGAGCATCATCCGCCTGCAGAGCCTGTGTCGGGG...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACAGCATGTGCAAAAATaGACATTGGCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTQHVQK*TLARWL
Trigger: CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATTGTTGAGGAGTGCGTaGTTGATCCGCAGCACAATC +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTLLRSA*LIRSTI
Trigger: GATTGTGCTGCGGATCAACCACGCACTCCTCAACAA...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACGCCTCCCGACTCTTTaGCCTCCACCAGCACATAAC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVRLPTL*PPPAHN
Trigger: GTTATGTGCTGGTGGAGGTCAAAGAGTCGGGAGGCG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTAGTTTCTGGAGCCGACTaGGGGACTGGAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVVSGAD*GTGEGY
Trigger: GTAGCCTTCTCCAGTCCCTCAGTCGGCTCCAGAAAC...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAACTGTCGGGCTTTTCCTaGACCCTTGGGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKLSGFS*TLGLPH
Trigger: ATGTGGCAGCCCAAGGGTTCAGGAAAAGCCCGACAG...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTAGAGGCACGGGTCAGGTaGCCCAAGTGTCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVEARVR*PKCPKL
Trigger: GAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTC...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAGGTTCTTCAGGAGGTTaGCCTCGGTTAGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKGSSGG*PRLARG
Trigger: TCCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACC...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATGTGGCAGGTCATCTTaGACACGCTGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKCGRSS*TRCRAG
Trigger: CCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACTGGATGATGAAAGCTaGCTCCATGACCGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVLDDES*LHDRGA
Trigger: GGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAGCCGCCACGGTTTTCTaGGGTGGGAGAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKAATVF*GGRVFS
Trigger: AGAGAAGACTCTCCCACCCCAGAAAACCGTGGCGGC...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATTCGCTCTCCGTCCGTaGTTTCTGCTGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKFALRP*FLLQAE
Trigger: CTCAGCCTGCAGCAGAAACCACGGACGGAGAGCGAA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACTTTTGAGAGACAGATaGCAGGGTTACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTLLRDR*QGYCSF
Trigger: GAAGCTGCAGTAACCCTGCCATCTGTCTCTCAAAAG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACCAGGTTGTCCCTGTTaGCCTATAGGGAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVPGCPC*PIGRSD
Trigger: GTCAGACCTCCCTATAGGTCAACAGGGACAACCTGG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAGCCTGCGCCACCAGCTaGATATGCACGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKACATS*ICTYLM
Trigger: CATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGC...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTATGCCCAGGTACAGGATaGCCGAGAGGACGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVCPGTG*PRGRQK
Trigger: TTTTTGCCGTCCTCTCGGCCATCCTGTACCTGGGCA...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATTTCCGAAGGGGTGCTaGCTCCTCTTGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKFPKGC*LLLAAL
Trigger: AAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATTGGGCAGGAGCACCTaGAACTGCTCGGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKLGRST*NCSVKS
Trigger: GGATTTCACCGAGCAGTTCCAGGTGCTCCTGCCCAA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACAGCCTCCAGTTGGCTaGTCTCCTCCATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVQPPVG*SPPSSL
Trigger: AAGTGAAGATGGAGGAGATCAGCCAACTGGAGGCTG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR GCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATTGGTGGTGCGGTCGTaGAGAGTCATGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKLVVRS*RVMLMM
Trigger: CATCATCAGCATGACTCTGCACGACCGCACCACCAA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATTCCCTGCGAAGTGCTaGATGATGAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKFPAKC*MMKAGS
Trigger: GGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAGCATATGCACGTACTTaGTGGTTCCATCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKAYART*WFHLRC
Trigger: GCAACGCAGATGGAACCATCAAGTACGTGCATATGC...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACGGAAGTCCTTGATCTaGTATTTCACCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVRKSLI*YFTFPA
Trigger: CGCAGGGAAGGTGAAATATCAGATCAAGGACTTCCG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR TCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACTTTACTTTTCAGGATaGAGGCGCGGGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVLYFSG*RRGVSG
Trigger: TCCAGAAACCCCGCGCCTTCATCCTGAAAAGTAAAG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR GCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACAGCATGTGCAAAAATaGACATTGGCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVQHVQK*TLARWL
Trigger: CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAACTTCTTCTGGACAGCTaGCTTTTTCGCACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKLLLDS*LFRTSL
Trigger: GAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAG...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACTTCTTCTGGACAGCTaGCTTTTTCGCACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVLLLDS*LFRTSL
Trigger: GAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CCA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATGGATGTGTTTGTTCTaGAACTTGACGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKWMCLF*NLTCSS
Trigger: GCTGGAGCACGTCAAGTTCCAGAACAAACACATCCA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGAGGGACGGGAGGAGCTaGGAGACGTCGCTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQRDGRS*ETSLVE
Trigger: CTCCACGAGCGACGTCTCCAAGCTCCTCCCGTCCCT...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS GCA 90 bp CCTGCTCCCGGCGGCCCGAGCTGCCTGCCTCTTTCACACTCATCCTaGCGGCCGCCTGGCTTCAGCATGCCTCCCAGGCTCGGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: PAPGGPSCLPLSHSS*RPPGFSMPPRLGAR
Trigger: GCGCGCCCCGAGCCTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGGAGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS-3UTR CAA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGATGGGCACCGAGGCCTaGTCGCTGGTCAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQMGTEA*SLVRLS
Trigger: AGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCAT...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS TCA 90 bp CCCGGAGCACGGCCCAGCGGAACACGGCCACGGGGTCCATGCCGATaGGCTCCCGCACGTAGGAGCTGTCACTGCCCCGCAGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PGARPSGTRPRGPCR*APARRSCHCPAAGP
Trigger: TGGCCCTGCTGCGGGGCAGTGACAGCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCGTGGCCGTGTTCCGCTGGGCCGTGCTCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp CTTTTCGGCCCTCTCGGCCCGCAGGCGTCCGGCCTCCCGAAGCACTaGCATGGCCCGGATAGCAGCCCGGAGCACGGCCCAGCGGAACAC +
Preference number: 5 (lower is better)
Translates to: LFGPLGPQASGLPKH*HGPDSSPEHGPAEH
Trigger: GTGTTCCGCTGGGCCGTGCTCCGGGCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCCGGACGCCTGCGGGCCGAGAGGGCCGAAAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000682292.1
CDS CCA 90 bp TGGCTGCACCTCAGGCTCCGATGCCAGGTGCCCGCCATCCTCCGCTaGCTCCGGCCCCTGCTCAGCTACCTGCTGCCCTCCAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: WLHLRLRCQVPAILR*LRPLLSYLLPSSRL
Trigger: CAGGCGGCTGGAGGGCAGCAGGTAGCTGAGCAGGGGCCGGAGCCAGCGGAGGATGGCGGGCACCTGGCATCGGAGCCTGAGGTGCAGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp TGGCGGCGGCCACCAGCTTCTTGCCCCGCCACAGTTCCACGGCGCTaGCCAGCCGCTCGGCGTCCAGGTACCGCTGGATCTGCGTGGAGC +
Preference number: 5 (lower is better)
Translates to: WRRPPASCPATVPRR*PAARRPGTAGSAWS
Trigger: GCTCCACGCAGATCCAGCGGTACCTGGACGCCGAGCGGCTGGCCAGCGCCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCGCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp TGGGGCAGCCGCCTCCCGGGCACCCGGTGCCCAGCGAGGCAGGTGGGAGGGCAGGGGAAGTTCTCCAGCTaGACTGCTGCGGGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: WGSRLPGTRCPARQVGGQGKFSS*TAAGSV
Trigger: GACAGACCCCGCAGCAGTCAAGCTGGAGAACTTCCC...CTGCCCTCCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS TCA 90 bp CCAGCGCCCTCCGGACCCGGTAGGACCGCCAGCAGGCCTGGATGGTaGCGGCGGCCCGCTTCATCTGCAGGAAGTGCCGACGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PAPSGPGRTASRPGW*RRPASSAGSADAPA
Trigger: TGCTGGAGCGTCGGCACTTCCTGCAGATGAAGCGGGCCGCCGTCACCATCCAGGCCTGCTGGCGGTCCTACCGGGTCCGGAGGGCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp CGGCCCGAGCTGCCTGCCTCTTTCACACTCATCCTGCCGGCCGCCTaGCTTCAGCATGCCTCCCAGGCTCGGGGCGCGCGTGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RPELPASFTLILPAA*LQHASQARGARVLE
Trigger: CTCCAGGACACGCGCGCCCCGAGCCTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS CCA 90 bp CGGCGCTGGCCAGCCGCTCGGCGTCCAGGTACCGCTGGATCTGCGTaGAGCCTCCGGGGCTGTCGGGCTTTTCCTGAACCCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RRWPAARRPGTAGSA*SLRGCRAFPEPLGC
Trigger: GCAGCCCAAGGGTTCAGGAAAAGCCCGACAGCCCCGGAGGCTCCACGCAGATCCAGCGGTACCTGGACGCCGAGCGGCTGGCCAGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp AGGGCGGCCCCTGTGGCCCGGTGTCTGTCGCTGAGGTCCAGGGACTaGCTGAGCATGGCACTAGGGCTGGCGGCGGCCACCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RAAPVARCLSLRSRD*LSMALGLAAATSFL
Trigger: CAAGAAGCTGGTGGCCGCCGCCAGCCCTAGTGCCATGCTCAGCCAGTCCCTGGACCTCAGCGACAGACACCGGGCCACAGGGGCCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GATGTGCAGGTGGTAGGCCGCCTGCTCCCGGCGGCCCGAGCTGCCTaGCTCTTTCACACTCATCCTGCCGGCCGCCTGGCTTCAGCATGC +
Preference number: 5 (lower is better)
Translates to: DVQVVGRLLPAARAA*LFHTHPAGRLASAC
Trigger: GCATGCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGGAGCAGGCGGCCTACCACCTGCACATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS GCA 90 bp GGTAGATGTGCAGGTGGTAGGCCGCCTGCTCCCGGCGGCCCGAGCTaGCTGCCTCTTTCACACTCATCCTGCCGGCCGCCTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GRCAGGRPPAPGGPS*LPLSHSSCRPPGFS
Trigger: GCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGGAGCAGGCGGCCTACCACCTGCACATCTACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCGGGCTGCCACATGGTTaGCTCTTGTCCTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPGLPHG*LLSSGV
Trigger: GACCCCCGAGGACAAGAGCAAACCATGTGGCAGCCC...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCAGCCTCCTGCAGCCCTaGGCGTCCGGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPSLLQP*ASGRVT
Trigger: TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS CCA 90 bp TGTCCTTGGTGGCAGTCACGCGGCACGAGGCCTGGCTCTCGGTGGTaGACAGCTGGGGGTAGATGTGCAGGTGGTAGGCCGCCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: CPWWQSRGTRPGSRW*TAGGRCAGGRPPAP
Trigger: GGGAGCAGGCGGCCTACCACCTGCACATCTACCCCCAGCTGTCCACCACCGAGAGCCAGGCCTCGTGCCGCGTGACTGCCACCAAGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp TACGCACACGCCGAAGTGGCCAGGCTCAACGCCTGGCTCGCCCTTCCTCCCGTAAGCTCCCGAGTGCGGTaGGCAGCACCCGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: YAHAEVARLNAWLALPPVSSRVR*AAPDLR
Trigger: CCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGCT...TACGGGAGGAAGGGCGAGCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CAA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCGTCAGCGGGTCCGAGTaGTCAGGGCAGCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIVSGSE*SGQRRR
Trigger: CCTCCTGCGCTGCCCTGACAACTCGGACCCGCTGAC...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTGGGGCAGGCAGTACGTaGGGGGATCCGAGTACCTCC +
Preference number: 5 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRGAGST*GDPSTS
Trigger: GGAGGTACTCGGATCCCCCAACGTACTGCCTGCCCC...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGAGCCTCCTGCAGCCCTaGGCGTCCGGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRSLLQP*ASGRVT
Trigger: TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS GCA 90 bp CCCTCGGTTAGCTCGGGGAGGTTACACAGGTCATCAAAGTCCGCCTaGTGCCGTGGCAGGAGGCCACGCTCCACTAGGCGCCGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PSVSSGRLHRSSKSA*CRGRRPRSTRRRVA
Trigger: AGCCACCCGGCGCCTAGTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGACCTGTGTAACCTCCCCGAGCTAACCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GCTGGCCGACGTCTCCGAGTCCAGGTTCTCCTCGTCCGAGCCCCTTaGGTCCAGCTCCGGCAGCCGGTAGGTGATGTCCTCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: AGRRLRVQVLLVRAP*VQLRQPVGDVLLLL
Trigger: GAGGAGAAGGAGGACATCACCTACCGGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAGGAGAACCTGGACTCGGAGACGTCGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTTGGTGCTCTGGGTCTaGCCGGAGCCGCTCTCACCC +
Preference number: 5 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGLVLWV*PEPLSP
Trigger: GGGTGAGAGCGGCTCCGGCAAGACCCAGAGCACCAA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTTGGTGCTCTGGGTCTaGCCGGAGCCGCTCTCACCC +
Preference number: 5 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGALVLWV*PEPLSP
Trigger: GGGTGAGAGCGGCTCCGGCAAGACCCAGAGCACCAA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCTCCTGGAACGTGTACTaGGCGCTGTACCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPSWNVY*ALYPDL
Trigger: GAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGGA...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS TCA 90 bp CTGTTTCTGGTGCCGGTAGAGCTTCCGCTGCCAGTAGCCCCTCCATaGGGCCTGGAGGTACACGGCAGCCTGCGTCCTCTCCAGCGCCCT +
Preference number: 5 (lower is better)
Translates to: LFLVPVELPLPVAPP*GLEVHGSLRPLQRP
Trigger: AGGGCGCTGGAGAGGACGCAGGCTGCCGTGTACCTCCAGGCCTCATGGAGGGGCTACTGGCAGCGGAAGCTCTACCGGCACCAGAAACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp TCGGTTAGCTCGGGGAGGTTACACAGGTCATCAAAGTCCGCCTGCTaGCGTGGCAGGAGGCCACGCTCCACTAGGCGCCGGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SVSSGRLHRSSKSAC*RGRRPRSTRRRVAV
Trigger: CACAGCCACCCGGCGCCTAGTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGACCTGTGTAACCTCCCCGAGCTAACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GGGGCTTCCAGGCCCTTCTTCATGGTGGTGGCTTCCAGCACCACGTaGCCGGACACTGCATTCTCCAGCTCCTCTGCGCCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GASRPFFMVVASSTT*PDTAFSSSSAPSRL
Trigger: CAGCCTGGAGGGCGCAGAGGAGCTGGAGAATGCAGTGTCCGGGCACGTGGTGCTGGAAGCCACCACCATGAAGAAGGGCCTGGAAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GCTGGCCGACGTCTCCGAGTCCAGGTTCTCCTCGTCCGAGCCCCTTaGGTCCAGCTCCGGCAGCCGGTAGGTGATGTCTTGCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: AGRRLRVQVLLVRAP*VQLRQPVGDVLLLL
Trigger: GAGGAGAAGCAAGACATCACCTACCGGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAGGAGAACCTGGACTCGGAGACGTCGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594824.5
ENST00000596942.5
ENST00000597073.5
ENST00000597572.1
ENST00000597881.1
ENST00000598419.1
CDS-3UTR CAA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTAGGTTCTTCAGGAGGTaGCCCTCGGTTAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRRFFRR*PSVSSG
Trigger: CCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACCT...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTACGTGTGGCTCCAGCTaGCCCAGCTGCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRTCGSS*PSCWFS
Trigger: TGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGT...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGCAGTGGATGAGGAAGTaGGTGCTCTGGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGQWMRK*VLWVLP
Trigger: CGGCAAGACCCAGAGCACCAACTTCCTCATCCACTG...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCCCAAACCGGCTGGAGTaGTTGTTGTGGGCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPPNRLE*LLWAVL
Trigger: CAAGACAGCCCACAACAACAACTCCAGCCGGTTTGG...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCATCTGGCTGAAGCTCTaGCGCTGCAGGTGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIIWLKL*RCRCPR
Trigger: TCGGGGGCACCTGCAGCGCAAGAGCTTCAGCCAGAT...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGCCACATGGTTTGCTCTaGTCCTCGGGGGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGPHGLL*SSGVSG
Trigger: CCCCGAGACCCCCGAGGACAAGAGCAAACCATGTGG...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGAGTGACTGGAAGAGGTaGAGGACCAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTSDWKR*RTRLVS
Trigger: GGACACCAACCTGGTCCTCAACCTCTTCCAGTCACT...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCATTGTGGCAGGTCATCTaGCACACGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PQVAGHPLLGAPGRPALALWQVI*HTLQSR
Trigger: CCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACAA...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGGGGCAGGCAGTACGTaGGGGGATCCGAGTACCTCC +
Preference number: 5 (lower is better)
Translates to: APCPRFVATCPGVWGSGPGAGST*GDPSTS
Trigger: GGAGGTACTCGGATCCCCCAACGTACTGCCTGCCCC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS GCA 90 bp CCACGCTCCACTAGGCGCCGGGTGGCTGTGGCCTGCGCCACCAGCTaGATATGCACGTACTTGATGGTTCCATCTGCGTTGCGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PRSTRRRVAVACATS*ICTYLMVPSALRSC
Trigger: GCAGGAGCGCAACGCAGATGGAACCATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGCCACAGCCACCCGGCGCCTAGTGGAGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp CGGAACCAGCTCTGCAGCAGCAGGATTTTCCGCACCACCTCCCGGTaGAGCGTCTCCTGCAGGGCTTGCCGCTCCGTCTCCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RNQLCSSRIFRTTSR*SVSCRACRSVSFRK
Trigger: CTTCCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCGGAAAATCCTGCTGCTGCAGAGCTGGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp CCAGGCTGGTCGGCCGCTCCAACTGGCCAGGCCTGGGGCTCCCACTaGGCAGCGTCTTCTCAGTTTCTTCAGAGACCTTGCCAACTGCCA +
Preference number: 5 (lower is better)
Translates to: PGWSAAPTGQAWGSH*AASSQFLQRPCQLP
Trigger: TGGCAGTTGGCAAGGTCTCTGAAGAAACTGAGAAGACGCTGCCCAGTGGGAGCCCCAGGCCTGGCCAGTTGGAGCGGCCGACCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp CCGCCGGCTGCCTCCTCCTCCAGCAGCACCTCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGGCTCTTGTTAGCATTTTGTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PPAASSSSSTSSSSS*MSRVLGLLLAFCRR
Trigger: CCTGCGACAAAATGCTAACAAGAGCCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGAGGTGCTGCTGGAGGAGGAGGCAGCCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595641.5
ENST00000596942.5
CDS-3UTR CAA 90 bp AGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCACCTCACGTCAGTGGATGAGGAAGTaGGTGCTCTGGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: SRPLPALTLHLGPVPTSRQWMRK*VLWVLP
Trigger: CGGCAAGACCCAGAGCACCAACTTCCTCATCCACTG...ACGTGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGCGCTGTACAGAGACTaGGCCATGGAGTCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: APCPRFVATCPGVWGSGPALYRD*AMESRA
Trigger: TGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCGC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGTTGAGGAGTGCGTGGTaGATCCGCAGCACAATCCAG +
Preference number: 5 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLRSAW*IRSTIQ
Trigger: CTGGATTGTGCTGCGGATCAACCACGCACTCCTCAA...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCCTCAGCACCTGCTCTaGCGGCTTCCAGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEPQHLL*RLPGLP
Trigger: GGGAAGCCCTGGAAGCCGCAAGAGCAGGTGCTGAGG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTGCGGCCACCAGCTTCTaGCCCCGCCACAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAAATSF*PRHSST
Trigger: CGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCGC...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGTTGAGCTCATTGGCGTaGGTGATCTGGCGGAACACC +
Preference number: 5 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLSSLA*VIWRNT
Trigger: GGTGTTCCGCCAGATCACCAACGCCAATGAGCTCAA...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGCGAACACGTGCCCGTaGTGCTCCTGGACAGCACGC +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEANTCP*CSWTAR
Trigger: GCGTGCTGTCCAGGAGCACAACGGGCACGTGTTCGC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GATGGGCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGCCGAAGTGATGGGCACCGAGGCCTaGTCGCTGGTCAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: DGHRGLVAGQAVYAHAEVMGTEA*SLVRLS
Trigger: AGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCAT...CACTTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCAGCTCCCGAGTGCGGTaGGCAGCACCCGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: SLLQPLASGRVTATFKSPSSRVR*AAPDLR
Trigger: CCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGCT...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAAGTCTCTCCAGGGAGTaGTGGTTGGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PQVAGHPLLGAPGRPALASLSRE*WLASGR
Trigger: CCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACT...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTGCCTTGACTCTGCACTaGGGGCCGGTGCCCACCTCA +
Preference number: 5 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVAALTLH*GPVPTS
Trigger: TGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGC...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGCCTTGACTCTGCACTaGGGGCCGGTGCCCACCTCA +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEALTLH*GPVPTS
Trigger: TGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCCAGAGATCCCCAGGTaGTCCCTGTTGACCTATAGG +
Preference number: 5 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPPEIPR*SLLTYR
Trigger: CCTATAGGTCAACAGGGACAACCTGGGGATCTCTGG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCTGTGCGGGGGCCCCTaGTCCCAGATTTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPELCGGP*SQICGH
Trigger: GTGGCCACAAATCTGGGACAAGGGGCCCCCGCACAG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCCGTGCATCTCCACGTGTTCCAGGAGCTTCTCCAGCACGATGGGCACCGAGGCGCGAACACGTGCCCGTaGTGCTCCTGGACACGTGTC +
Preference number: 5 (lower is better)
Translates to: AVHLHVFQELLQHDGHRGANTCP*CSWTRV
Trigger: GACACGTGTCCAGGAGCACAACGGGCACGTGTTCGC...GCCTCGGTGCCCATCGTGCTGGAGAAGCTCCTGGAACACGTGGAGATGCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS TCA 90 bp AGCTCTTGCGCTGCAGGTGCCCCCGACACAGGCTCTGCAGGCGGATaGTGCTCTGTTTCTGGTGCCGGTAGAGCTTCCGCTGCCAGTAGC +
Preference number: 5 (lower is better)
Translates to: SSCAAGAPDTGSAGG*CSVSGAGRASAASS
Trigger: GCTACTGGCAGCGGAAGCTCTACCGGCACCAGAAACAGAGCATCATCCGCCTGCAGAGCCTGTGTCGGGGGCACCTGCAGCGCAAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 90 bp GCAGCGCAGGAGGCAGGGTGCGAAGATAATGGCCAGCGCCCCAGGTaGCATGCGGTTGACATCCTCGAGCAGGGCCACCTTGACAAGGTG +
Preference number: 5 (lower is better)
Translates to: AAQEAGCEDNGQRPR*HAVDILEQGHLDKV
Trigger: CACCTTGTCAAGGTGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCCATTATCTTCGCACCCTGCCTCCTGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000597073.5
ENST00000682292.1
CDS GCA 90 bp CGTGCTCCAGCCCTCTTTGCCGACGCGACTCACGCTTCTCCCGGCTaGTGGGGACTTTCTCGTGACTTTCAGCCGCCACGGTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RAPALFADATHASPG*WGLSRDFQPPRFSG
Trigger: CCCAGAAAACCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp ACTTGGAGTCCAGTAGGTTCTAGGACAGACACATGGGGTCCGGCCTaGCCTCCCACAGCCCACACGGGCACGGGGAGGCATCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: TWSPVGSRTDTWGPA*PPTAHTGTGRHHRC
Trigger: ACACCTGTGATGCCTCCCCGTGCCCGTGTGGGCTGTGGGAGGGCAGGCCGGACCCCATGTGTCTGTCCTAGAACCTACTGGACTCCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601490.1
CDS CCA 90 bp GCTCCAGCCCTCTTTGCCGACGCGACTCACGCTTCTCCCGGCTGCTaGGGACTTTCTCGTGACTTTCAGCCGCCACGGTTTTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: APALFADATHASPGC*GLSRDFQPPRFSGV
Trigger: CACCCCAGAAAACCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp CGTGGATTTAGAGTCGACCTGAGAGCCCGGGGACAGCCCTGCGTCTaGGAGGGAGGATGCGTCGCCTGGCTTCTTCTTCTGGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: RGFRVDLRARGQPCV*EGGCVAWLLLLDSW
Trigger: CCAGCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGCTCTCAGGTCGACTCTAAATCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GGGAGTTGTGGTTGGCTTCTGGAAGGTGCTCCAGGACGGCATAGATaGCAGCCAGCTGCTCCTGCTTCTCCGGCAGCTCGACGGCTCGGA +
Preference number: 5 (lower is better)
Translates to: GSCGWLLEGAPGRHR*QPAAPASPAARRLG
Trigger: TCCGAGCCGTCGAGCTGCCGGAGAAGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp TCAGGGCCGGCAGCCGGAGGACCCTCGCCCTGGGGCCTGCTGGGATaGACGGGAAGGAGAAAAGCAGACGCTACCTTAATACTGACCTTC +
Preference number: 5 (lower is better)
Translates to: SGPAAGGPSPWGLLG*TGRRKADATLILTF
Trigger: GAAGGTCAGTATTAAGGTAGCGTCTGCTTTTCTCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCGAGGGTCCTCCGGCTGCCGGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597073.5
ENST00000597572.1
CDS-3UTR CAA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGATGGTTCCATCTGCGTaGCGCTCCTGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGMVPSA*RSCSRK
Trigger: CTTCCTGCTGCAGGAGCGCAACGCAGATGGAACCAT...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGCCGCTTGAGCTGAAATTCTaGGCGCTCTTCCTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: EGRTLALQLWRPAPVQGPLELKF*ALFLAD
Trigger: GTCAGCGAGGAAGAGCGCCAAGAATTTCAGCTCAAG...CGGCCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGTCCTGGAACGTGTACTaGGCGCTGTACCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGSWNVY*ALYPDL
Trigger: GAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGGA...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCGTCTCCTGCAGGGCTaGCCGCTCCGTCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLQPLASGRVTATFKSPWRLLQG*PLRLLQ
Trigger: CTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTGTCTACGCACACGCCGAAGTGGCCAGGCTCAACGCCTGGCTCGCCCTTCCTCTTGTGGCAGGTCATCTaGCACACGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSTHTPKWPGSTPGSPFLLWQVI*HTLQSR
Trigger: CCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACAA...GAGGAAGGGCGAGCCAGGCGTTGAGCCTGGCCACTTCGGCGTGTGCGTAGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CAA 90 bp CCCCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCATTGTGCACGCACTTCTaGTGGCAGGTCATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: PQVAGHPLLGAPGRPALALCTHF*WQVILH
Trigger: GTGCAAGATGACCTGCCACAAGAAGTGCGTGCACAA...TGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGAGCTCCCGAGTGCGGTaGGCAGCACCCGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWSSRVR*AAPDLR
Trigger: CCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGCT...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGCCAGGTGACATGCGGTaGACATCCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQPGDMR*TSSSRA
Trigger: GGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGG...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCGTCAGCGGGTCCGAGTaGTCAGGGCAGCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSSDMQTLSAVALSHWSGVSGSE*SGQRRR
Trigger: CCTCCTGCGCTGCCCTGACAACTCGGACCCGCTGAC...GCCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGTCAGCGGGTCCGAGTaGTCAGGGCAGCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLVSGSE*SGQRRR
Trigger: CCTCCTGCGCTGCCCTGACAACTCGGACCCGCTGAC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCCTCGTCCGAGCCCCTaGGGTCCAGCTCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GRCPPHVTLELLILDPSLPRPSP*GPAPAA
Trigger: GGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAGG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTCCGAGTACCTCCGCTaGGCCCCAGGTGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: RCEAAGGDVVLPTGASMISEYLR*APGGWP
Trigger: TGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGA...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGCCTTGACTCTGCACTaGGGGCCGGTGCCCACCTCA +
Preference number: 5 (lower is better)
Translates to: SLLQPLASGRVTATFKSPALTLH*GPVPTS
Trigger: TGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCTGTGCGGGGGCCCCTaGTCCCAGATTTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SLLQPLASGRVTATFKSPLCGGP*SQICGH
Trigger: GTGGCCACAAATCTGGGACAAGGGGCCCCCGCACAG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCGCGCAGGGGGCCCTTTaGAGAGACAGATGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACAQGAL*RDRWQG
Trigger: ACCCTGCCATCTGTCTCTCAAAAGGGCCCCCTGCGC...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS TCA 90 bp GCGAGTCGTTGGCGTCCAGCACCCATTCCTCGCCTCCCGACTCTTTaGCCTCCACCAGCACATAACATTTGGTGCCGTCCAGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: ASRWRPAPIPRLPTL*PPPAHNIWCRPAAG
Trigger: GCCTGCGGCTGGACGGCACCAAATGTTATGTGCTGGTGGAGGTCAAAGAGTCGGGAGGCGAGGAATGGGTGCTGGACGCCAACGACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 90 bp AGCCGCTCTCACCCGAGATCACGATGCACTGGTTCACGCGCTTCCTaGGCATGGTGTAGTAGGCCACGTCGGCCAGCGCGAAGACGTGTG +
Preference number: 5 (lower is better)
Translates to: SRSHPRSRCTGSRAS*AWCSRPRRPARRRV
Trigger: CACACGTCTTCGCGCTGGCCGACGTGGCCTACTACACCATGCTCAGGAAGCGCGTGAACCAGTGCATCGTGATCTCGGGTGAGAGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp AGGATTTTCCGCACCACCTCCCGGTGCAGCGTCTCCTGCAGGGCTTaGCGCTCCGTCTCCTTCAGGAAGACCTTGGTCTTCCCGATCTGG +
Preference number: 5 (lower is better)
Translates to: RIFRTTSRCSVSCRA*RSVSFRKTLVFPIW
Trigger: CCAGATCGGGAAGACCAAGGTCTTCCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCGGAAAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GTTCTTCTTCCCTTTGCCTCCTGGTTCCTTGGTGCGCTTCTCACCTaGAGCGTGGCGATGCTGCTGTCCGGAGGGGGCTTCCAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: VLLPFASWFLGALLT*SVAMLLSGGGFQAL
Trigger: AAGGGCCTGGAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp CCGTTCAATGAGAATCTCCTTTTCCCGGTCCTCATCGCCGCCGGCTaGCTCCTCCTCCAGCAGCACCTCCAGCTCCTCCTCCTGGATGTC +
Preference number: 5 (lower is better)
Translates to: PFNENLLFPVLIAAG*LLLQQHLQLLLLDV
Trigger: GACATCCAGGAGGAGGAGCTGGAGGTGCTGCTGGAGGAGGAGGCAGCCGGCGGCGATGAGGACCGGGAAAAGGAGATTCTCATTGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000597073.5
ENST00000597572.1
ENST00000597881.1
ENST00000598419.1
ENST00000682292.1
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGCTGGCAATGGCGTCCTaGATGACGTCCGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPELAMAS*MTSEVV
Trigger: CACCACCTCGGACGTCATCAAGGACGCCATTGCCAG...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGACGTGTGGCTCCAGCTaGCCCAGCTGCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKTCGSS*PSCWFS
Trigger: TGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGT...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGCCAAACCGGCTGGAGTaGTTGTTGTGGGCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGPNRLE*LLWAVL
Trigger: CAAGACAGCCCACAACAACAACTCCAGCCGGTTTGG...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTGTTGCTGTTTGAACTaGGCCAGCAGGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGACCCLN*ASRVWL
Trigger: GAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGGGGCTCCAGGGCGCCCTGCACTGGCAGGTCTGCCCCGGGCGTGATGTACACGTGCCAGGGCAATCCTTaGATGCTCTTGATCATTTGG +
Preference number: 5 (lower is better)
Translates to: RGSRAPCTGRSAPGVMYTCQGNP*MLLIIW
Trigger: CCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCA...CGTGTACATCACGCCCGGGGCAGACCTGCCAGTGCAGGGCGCCCTGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGAGGTGCAGTAGGGACTaGGTGGTGCGGTCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQRCSRD*VVRSCR
Trigger: TCTGCACGACCGCACCACCAAGTCCCTACTGCACCT...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCTCAGCACCTGCTCTaGCGGCTTCCAGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQPQHLL*RLPGLP
Trigger: GGGAAGCCCTGGAAGCCGCAAGAGCAGGTGCTGAGG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCCTCAGCACCTGCTCTaGCGGCTTCCAGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GLVASALTAHVQVIRETGPQHLL*RLPGLP
Trigger: GGGAAGCCCTGGAAGCCGCAAGAGCAGGTGCTGAGG...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTGACCGTTACGAAGGACGACGGCCTTCGTCGTGGAGGGGCGGCCACGGTGGGGTGTTTGTTCTGGAACTaGACGTGCTCCAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LTVTKDDGLRRGGAATVGCLFWN*TCSSPL
Trigger: AAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACA...CCCCACCGTGGCCGCCCCTCCACGACGAAGGCCGTCGTCCTTCGTAACGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGTGCCATGGCCTGGGGTaGCTCTGTGGGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKCHGLG*LCGLLL
Trigger: CAAAAGCAGCCCACAGAGCAACCCCAGGCCATGGCA...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCAGTACGTTGGGGGATCCGAGTACCTCCGCTTGGCCCCAGGTGGCTGGCCATCGTTTCTTCAGAGACCTaGCCAACTGCCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AVRWGIRVPPLGPRWLAIVSSET*PTAMAW
Trigger: CCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAAC...GATGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGATCCCCCAACGTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTGGGCTGCCACATGGTTaGCTCTTGTCCTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: SGSFSEGRTLALQLWRPAGLPHG*LLSSGV
Trigger: GACCCCCGAGGACAAGAGCAAACCATGTGGCAGCCC...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGCGGCCACCAGCTTCTaGCCCCGCCACAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPAATSF*PRHSST
Trigger: CGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCGC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCGCGGCCACCAGCTTCTaGCCCCGCCACAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: LVASALTAHVQVIRETGSAATSF*PRHSST
Trigger: CGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCGC...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGAGCTCCCGAGTGCGGTaGGCAGCACCCGACTTGCGG +
Preference number: 5 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKSSRVR*AAPDLR
Trigger: CCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGCT...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGGCCATGGAGCATTTaGTCGCAGGAGCGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGRPWSI*SQERKP
Trigger: AGGCTTTCGCTCCTGCGACAAAATGCTCCATGGCCT...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCTCCGAGTACCTCCGCTaGGCCCCAGGTGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPSEYLR*APGGWP
Trigger: TGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGA...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCCGAGTACCTCCGCTaGGCCCCAGGTGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: KSSLLQPLASGRVTATFKSEYLR*APGGWP
Trigger: TGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGASDMQT*SAVALS
Trigger: GCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGA...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGAGGTGCGTCCATGATTaGGGGGCTGCGTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRCVHD*GAACEG
Trigger: CCCCTCGCACGCAGCCCCCAAATCATGGACGCACCT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAAGCCTCCTGCAGCCCTaGGCGTCCGGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: QICGHVSRCLGEWAKPERSLLQP*ASGRVT
Trigger: TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGCCCCTTGTCCCAGATTaGTGGCCACGTGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQPLVPD*WPRVQV
Trigger: CACCTGGACACGTGGCCACAAATCTGGGACAAGGGG...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCTGTGCGGGGGCCCCTaGTCCCAGATTTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMLCGGP*SQICGH
Trigger: GTGGCCACAAATCTGGGACAAGGGGCCCCCGCACAG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS CCA 90 bp TCGCTTCACCTTCAGAAGCTGCGACAGGGTGTCCAGCACCTCGGGTaGCCCGACCTCCAACCCTTCCTCTCGGCCTGTAGCTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLHLQKLRQGVQHLG*PDLQPFLSACSSLL
Trigger: AAGAAGAGAGCTACAGGCCGAGAGGAAGGGTTGGAGGTCGGGCCACCCGAGGTGCTGGACACCCTGTCGCAGCTTCTGAAGGTGAAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp CCGCACGTAGGAGCTGTCACTGCCCCGCAGCAGGGCCACGATGTCTaGCCGCATGTAGTCCATGTTCTTCTCCCGGAAGTCCTTGATCTG +
Preference number: 5 (lower is better)
Translates to: PHVGAVTAPQQGHDV*PHVVHVLLPEVLDL
Trigger: CAGATCAAGGACTTCCGGGAGAAGAACATGGACTACATGCGGCCAGACATCGTGGCCCTGCTGCGGGGCAGTGACAGCTCCTACGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGTGCACAGGCGAGTCGTaGGCGTCCAGCACCCATTCC +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMCTGES*ASSTHS
Trigger: GGAATGGGTGCTGGACGCCAACGACTCGCCTGTGCA...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCAGGAAGCGGTGCTaGAGGTTCTTCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAACRKRC*RFFRRL
Trigger: CAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCA...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCACGTGTGGCTCCAGCTaGCCCAGCTGCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLLQPLASGRVTATFKSPTCGSS*PSCWFS
Trigger: TGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGT...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTTGGTGCTCTGGGTCTaGCCGGAGCCGCTCTCACCC +
Preference number: 5 (lower is better)
Translates to: LCTWGRCPPHVTLELLILLVLWV*PEPLSP
Trigger: GGGTGAGAGCGGCTCCGGCAAGACCCAGAGCACCAA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGTCTTCCACGTCCTTCTaGTTGAGGAGTGCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGSSTSF*LRSAWL
Trigger: CAACCACGCACTCCTCAACAAGAAGGACGTGGAAGA...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAAGGTGCAGTAGGGACTaGGTGGTGCGGTCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTRCSRD*VVRSCR
Trigger: TCTGCACGACCGCACCACCAAGTCCCTACTGCACCT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGTCTCCTGCAGGGCTaGCCGCTCCGTCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPRLLQG*PLRLLQ
Trigger: CTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACG...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCGTCTCCTGCAGGGCTaGCCGCTCCGTCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHRLLQG*PLRLLQ
Trigger: CTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACG...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGATCTGGCTGAAGCTCTaGCGCTGCAGGTGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLIWLKL*RCRCPR
Trigger: TCGGGGGCACCTGCAGCGCAAGAGCTTCAGCCAGAT...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTCCACATGGTTTGCTCTaGTCCTCGGGGGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIPHGLL*SSGVSG
Trigger: CCCCGAGACCCCCGAGGACAAGAGCAAACCATGTGG...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCAGGGACGGGAGGAGCTaGGAGACGTCGCTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LVASALTAHVQVIRETGSRDGRS*ETSLVE
Trigger: CTCCACGAGCGACGTCTCCAAGCTCCTCCCGTCCCT...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCGCGAACACGTGCCCGTaGTGCTCCTGGACAGCACGC +
Preference number: 5 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPANTCP*CSWTAR
Trigger: GCGTGCTGTCCAGGAGCACAACGGGCACGTGTTCGC...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGCGAACACGTGCCCGTaGTGCTCCTGGACAGCACGC +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSANTCP*CSWTAR
Trigger: GCGTGCTGTCCAGGAGCACAACGGGCACGTGTTCGC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTTGTGGCAGGTCATCTaGCACACGCTGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVALWQVI*HTLQSR
Trigger: CCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACAA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGATGGGCACCGAGGCCTaGTCGCTGGTCAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLMGTEA*SLVRLS
Trigger: AGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCAT...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCCTCGTCCGAGCCCCTaGGGTCCAGCTCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHPRPSP*GPAPAA
Trigger: GGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAGG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: RRWRCGAPHRCVHDLGAASDMQT*SAVALS
Trigger: GCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGA...CGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGAGGTGCGTCCATGATTaGGGGGCTGCGTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: KSSLLQPLASGRVTATFKRCVHD*GAACEG
Trigger: CCCCTCGCACGCAGCCCCCAAATCATGGACGCACCT...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTAGGTGCGTCCATGATTaGGGGGCTGCGTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGRCVHD*GAACEG
Trigger: CCCCTCGCACGCAGCCCCCAAATCATGGACGCACCT...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCCCCCTTGTCCCAGATTaGTGGCCACGTGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLLQPLASGRVTATFKSPPLVPD*WPRVQV
Trigger: CACCTGGACACGTGGCCACAAATCTGGGACAAGGGG...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCTGTGCGGGGGCCCCTaGTCCCAGATTTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHLCGGP*SQICGH
Trigger: GTGGCCACAAATCTGGGACAAGGGGCCCCCGCACAG...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS TCA 90 bp TGTGGCAGGTCATCTTGCACACGCTGCAGAGCAGGGCCTTGTCCATaGGCCAGATATAGGAGAGGCACTGCTCGCACGACTGCGGGATGC +
Preference number: 5 (lower is better)
Translates to: CGRSSCTRCRAGPCP*ARYRRGTARTTAGC
Trigger: GCATCCCGCAGTCGTGCGAGCAGTGCCTCTCCTATATCTGGCTCATGGACAAGGCCCTGCTCTGCAGCGTGTGCAAGATGACCTGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000602158.1
ENST00000682292.1
CDS GCA 90 bp CTTAAACGTGGATTTAGAGTCGACCTGAGAGCCCGGGGACAGCCCTaGGTCTGGGAGGGAGGATGCGTCGCCTGGCTTCTTCTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LKRGFRVDLRARGQP*VWEGGCVAWLLLLD
Trigger: GTCCAGAAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGCTCTCAGGTCGACTCTAAATCCACGTTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GTCTGGGAGGGAGGATGCGTCGCCTGGCTTCTTCTTCTGGACAGCTaGCTTTTTCGCACTTCGCTCTCCGTCCGTGGTTTCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VWEGGCVAWLLLLDS*LFRTSLSVRGFCCR
Trigger: CCTGCAGCAGAAACCACGGACGGAGAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp AGCCCTGCGTCTGGGAGGGAGGATGCGTCGCCTGGCTTCTTCTTCTaGACAGCTGGCTTTTTCGCACTTCGCTCTCCGTCCGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SPASGREDASPGFFF*TAGFFALRSPSVVS
Trigger: AGAAACCACGGACGGAGAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGACGCAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGCTGGCAATGGCGTCCTaGATGACGTCCGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLLAMAS*MTSEVV
Trigger: CACCACCTCGGACGTCATCAAGGACGCCATTGCCAG...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGAGGTTCTTCAGGAGGTaGCCCTCGGTTAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRFFRR*PSVSSG
Trigger: CCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACCT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGCGCTGTACAGAGACTaGGCCATGGAGTCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LCTWGRCPPHVTLELLILALYRD*AMESRA
Trigger: TGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCGC...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGGCGCTGTACAGAGACTaGGCCATGGAGTCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGALYRD*AMESRA
Trigger: TGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCGC...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCTCTTCTGGGTGACTTaGGGCACCAGGGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LLQPLASGRVTATFKSPWLFWVT*GTRAAH
Trigger: ATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAG...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCGGCCTCTCCCTGCCTTGACTCTGCACTTGGGGCCGGTGCCCGATGCTCTTGATCATTaGGTTATGCAAATCGCGGTA +
Preference number: 5 (lower is better)
Translates to: PGSSRPLPALTLHLGPVPDALDH*VMQIAV
Trigger: TACCGCGATTTGCATAACCAAATGATCAAGAGCATC...GGGCACCGGCCCCAAGTGCAGAGTCAAGGCAGGGAGAGGCCGGCTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCAGGTGGCTGGCCATCCTCTTCTAGGGGCTCCAGGGCGCCCTGCACTGGCAGGATGAGTTTCAGGGACTaGGAGTCCAGTAGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: PGGWPSSSRGSRAPCTGRMSFRD*ESSRFF
Trigger: AAAGAACCTACTGGACTCCAAGTCCCTGAAACTCAT...CCTGCCAGTGCAGGGCGCCCTGGAGCCCCTAGAAGAGGATGGCCAGCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAGGTGGCTTTTTCTTCTaGTGCAGGTGCAGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: APCPRFVATCPGVWGSGPGGFFF*CRCSRD
Trigger: GTCCCTACTGCACCTGCACAAGAAGAAAAAGCCACC...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTATCTGGCTGAAGCTCTaGCGCTGCAGGTGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGIWLKL*RCRCPR
Trigger: TCGGGGGCACCTGCAGCGCAAGAGCTTCAGCCAGAT...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGAGGGACGGGAGGAGCTaGGAGACGTCGCTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLRDGRS*ETSLVE
Trigger: CTCCACGAGCGACGTCTCCAAGCTCCTCCCGTCCCT...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCTTGAGCTCATTGGCGTaGGTGATCTGGCGGAACACC +
Preference number: 5 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACLSSLA*VIWRNT
Trigger: GGTGTTCCGCCAGATCACCAACGCCAATGAGCTCAA...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCAGGTACTTGAGCTCATaGGCGTTGGTGATCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACRYLSS*ALVIWR
Trigger: CCGCCAGATCACCAACGCCAATGAGCTCAAGTACCT...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CACGATGGGCACCGAGGCCTTGTCGCTGGTCAGGCTGTCTACGCACACGCCGAATTGTGCACGCACTTCTaGTGGCAGGTCATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: HDGHRGLVAGQAVYAHAELCTHF*WQVILH
Trigger: GTGCAAGATGACCTGCCACAAGAAGTGCGTGCACAA...TTCGGCGTGTGCGTAGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCATCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS-3UTR CAA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCCAGGTGACATGCGGTaGACATCCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGPGDMR*TSSSRA
Trigger: GGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGG...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCATTCCTCATCTGCTCCTaGATCAGCATCTCCACGCAC +
Preference number: 5 (lower is better)
Translates to: APCPRFVATCPGVWGSGPFLICS*ISISTH
Trigger: GTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGAA...TGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGGGACGAAAACCCCAGTTaGAGAGGCCATGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: SEGRTLALQLWRPAPVQGDENPS*RGHGAF
Trigger: AAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGTC...CCCCTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGTCCGAGTACCTCCGCTaGGCCCCAGGTGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWSEYLR*APGGWP
Trigger: TGGCCAGCCACCTGGGGCCAAGCGGAGGTACTCGGA...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCGGGGCAGGCAGTACGTaGGGGGATCCGAGTACCTCC +
Preference number: 5 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLGAGST*GDPSTS
Trigger: GGAGGTACTCGGATCCCCCAACGTACTGCCTGCCCC...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGGGGCAGGCAGTACGTaGGGGGATCCGAGTACCTCC +
Preference number: 5 (lower is better)
Translates to: TWGRCPPHVTLELLILDPGAGST*GDPSTS
Trigger: GGAGGTACTCGGATCCCCCAACGTACTGCCTGCCCC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPESDMQT*SAVALS
Trigger: GCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGA...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCGCCTTGACTCTGCACTaGGGGCCGGTGCCCACCTCA +
Preference number: 5 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLALTLH*GPVPTS
Trigger: TGAGGTGGGCACCGGCCCCAAGTGCAGAGTCAAGGC...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACAGCCTCCTGCAGCCCTaGGCGTCCGGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHSLLQP*ASGRVT
Trigger: TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS TCA 90 bp GGGCACTCTCCTCCTTGCAGGACTGGATGTGTTTGTTCTGGAACTTaGCGTGCTCCAGCCCTCTTTGCCGACGCGACTCACGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GHSPPCRTGCVCSGT*RAPALFADATHASP
Trigger: GGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GGCCTGCGCCACCAGCTGCATATGCACGTACTTGATGGTTCCATCTaGGTTGCGCTCCTGCAGCAGGAAGTAGTAGCCATCCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GLRHQLHMHVLDGSI*VALLQQEVVAILLR
Trigger: CCTCAGGAGGATGGCTACTACTTCCTGCTGCAGGAGCGCAACGCAGATGGAACCATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GACTGGATGTGTTTGTTCTGGAACTTGACGTGCTCCAGCCCTCTTTaGCGACGCGACTCACGCTTCTCCCGGCTGCTGGGGACTTTCTCG +
Preference number: 5 (lower is better)
Translates to: DWMCLFWNLTCSSPL*RRDSRFSRLLGTFS
Trigger: CGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp CTCTCCTCCTTGCAGGACTGGATGTGTTTGTTCTGGAACTTGACGTaGTCCAGCCCTCTTTGCCGACGCGACTCACGCTTCTCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: LSSLQDWMCLFWNLT*SSPLCRRDSRFSRL
Trigger: CAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp CCTGAGCATGGTGTAGTAGGCCACGTCGGCCAGCGCGAAGACGTGTaGCTCCAGCTTGCCCAGCTGCTGGTTCTCATACATCTTCACGTA +
Preference number: 5 (lower is better)
Translates to: PEHGVVGHVGQREDV*LQLAQLLVLIHLHV
Trigger: TACGTGAAGATGTATGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGTCTTCGCGCTGGCCGACGTGGCCTACTACACCATGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCCAGTGGATGAGGAAGTaGGTGCTCTGGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLQWMRK*VLWVLP
Trigger: CGGCAAGACCCAGAGCACCAACTTCCTCATCCACTG...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCCCAAACCGGCTGGAGTaGTTGTTGTGGGCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: AKSSLLQPLASGRVTATFPNRLE*LLWAVL
Trigger: CAAGACAGCCCACAACAACAACTCCAGCCGGTTTGG...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGTGCGGGGGCCCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGGTCACCGTTTTTCTTTaGGTCAGAACCTCCACCAAG +
Preference number: 5 (lower is better)
Translates to: CAGAPCPRFVATCPGVWGVTVFL*VRTSTK
Trigger: CTTGGTGGAGGTTCTGACCAAAAGAAAAACGGTGAC...CCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGGGCCCCCGCACA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGTCCACGTCCTTCTTGTaGAGGAGTGCGTGGTTGATC +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPESTSFL*RSAWLI
Trigger: GATCAACCACGCACTCCTCAACAAGAAGGACGTGGA...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCTCTTCTGGGTGACTTaGGGCACCAGGGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQLFWVT*GTRAAH
Trigger: ATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAG...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGCTCTTCTGGGTGACTTaGGGCACCAGGGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLLFWVT*GTRAAH
Trigger: ATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAG...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGGTGCAGTAGGGACTaGGTGGTGCGGTCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSRCSRD*VVRSCR
Trigger: TCTGCACGACCGCACCACCAAGTCCCTACTGCACCT...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGGGTGGCTTTTTCTTCTaGTGCAGGTGCAGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQGGFFF*CRCSRD
Trigger: GTCCCTACTGCACCTGCACAAGAAGAAAAAGCCACC...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTAGGGCACTCTCCTCCTaGCAGGACTGGATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SGSFSEGRTLALQLWRPARALSS*QDWMCL
Trigger: CAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCT...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTGCCATGGCCTGGGGTaGCTCTGTGGGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LCTWGRCPPHVTLELLILCHGLG*LCGLLL
Trigger: CAAAAGCAGCCCACAGAGCAACCCCAGGCCATGGCA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATTGCCATGGCCTGGGGTaGCTCTGTGGGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYCHGLG*LCGLLL
Trigger: CAAAAGCAGCCCACAGAGCAACCCCAGGCCATGGCA...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTTGCCTCCTGGTTCCTaGGTGCGCTTCTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQLPPGS*VRFSPA
Trigger: TGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCTTGCCTCCTGGTTCCTaGGTGCGCTTCTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLLPPGS*VRFSPA
Trigger: TGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAA...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTGGGGGCTGCGTGCAACTCGTCCAGGTACTaGAGCTCATTGGCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RWRCGAPHRCVHDLGAACNSSRY*SSLALV
Trigger: CACCAACGCCAATGAGCTCAAGTACCTGGACGAGTT...GCACGCAGCCCCCAAATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGGGAAGTTCTCCAGCTaGACTGCTGCGGGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHGKFSS*TAAGSV
Trigger: GACAGACCCCGCAGCAGTCAAGCTGGAGAACTTCCC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCCAGGTGACATGCGGTaGACATCCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRCPPHVTLELLILDPSLPGDMR*TSSSRA
Trigger: GGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGTTCCTCATCTGCTCCTaGATCAGCATCTCCACGCAC +
Preference number: 5 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKFLICS*ISISTH
Trigger: GTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGAA...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTAGGCCATGGAGCATTTaGTCGCAGGAGCGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: SGSFSEGRTLALQLWRPARPWSI*SQERKP
Trigger: AGGCTTTCGCTCCTGCGACAAAATGCTCCATGGCCT...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCTGGATGTCCCGGGTCTaGGGGCTCTTGTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPWMSRV*GLLFRT
Trigger: GGTCCTGAACAAGAGCCCCAAGACCCGGGACATCCA...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTTGGATGTCCCGGGTCTaGGGGCTCTTGTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGWMSRV*GLLFRT
Trigger: GGTCCTGAACAAGAGCCCCAAGACCCGGGACATCCA...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTGGATGTCCCGGGTCTaGGGGCTCTTGTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: LCTWGRCPPHVTLELLILWMSRV*GLLFRT
Trigger: GGTCCTGAACAAGAGCCCCAAGACCCGGGACATCCA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTCCAGTGCAGTCCTCCTTCTCCTCCTaGATGGACTGGATCCGTTCA +
Preference number: 5 (lower is better)
Translates to: FSEGRTLALQLWRPAPVQSSFSS*MDWIRS
Trigger: TGAACGGATCCAGTCCATCAAGGAGGAGAAGGAGGA...CTGCACTGGAGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGGGTGGGAGCTTGATGTaGGCCGTGGGCATGATGGGG +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLGGSLM*AVGMMG
Trigger: CCCCATCATGCCCACGGCCAACATCAAGCTCCCACC...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGCCCCTTGTCCCAGATTaGTGGCCACGTGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KSSLLQPLASGRVTATFKPLVPD*WPRVQV
Trigger: CACCTGGACACGTGGCCACAAATCTGGGACAAGGGG...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS TCA 90 bp GGACCAGGTTGGTGTCCTTCTGGCCACGCTCAGTGGCCAGGTTGCTaGCGACGATCTGGTAGTTCTCCATCAGATCCTTGTAGCCCACGT +
Preference number: 5 (lower is better)
Translates to: GPGWCPSGHAQWPGC*RRSGSSPSDPCSPR
Trigger: ACGTGGGCTACAAGGATCTGATGGAGAACTACCAGATCGTCGTCAGCAACCTGGCCACTGAGCGTGGCCAGAAGGACACCAACCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS GCA 90 bp TGTAGTAGGCCACGTCGGCCAGCGCGAAGACGTGTGGCTCCAGCTTaGCCAGCTGCTGGTTCTCATACATCTTCACGTACTTGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: CSRPRRPARRRVAPA*PAAGSHTSSRTWGC
Trigger: ACAACCCCAAGTACGTGAAGATGTATGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGTCTTCGCGCTGGCCGACGTGGCCTACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GGACAGGCACGAGACTGCCTCTTCCACGTCCTTCTTGTTGAGGAGTaGGTGGTTGATCCGCAGCACAATCCAGTCGAACAGGGCGCTGTA +
Preference number: 5 (lower is better)
Translates to: GQARDCLFHVLLVEE*VVDPQHNPVEQGAV
Trigger: TACAGCGCCCTGTTCGACTGGATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp GCTCCTGGACAGCACGCTCCTGCTTCCGCTTCTTCTTCTGAGCTTTaGTCTGCTTCACTGGCTCGAAGTCGTTCTTGGTGTAGCCACGGG +
Preference number: 5 (lower is better)
Translates to: APGQHAPASASSSEL*SASLARSRSWCSHG
Trigger: CCCGTGGCTACACCAAGAACGACTTCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAAGCAGGAGCGTGCTGTCCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp ACGCGTGCAGACGGGCCCATGCGCACATTGACACTGACACACACGTaGATGCTCCTGCCAATGTTCGCCTGCTCGGACTCTCATCTATGT +
Preference number: 5 (lower is better)
Translates to: TRADGPMRTLTLTHT*MLLPMFACSDSHLC
Trigger: ACATAGATGAGAGTCCGAGCAGGCGAACATTGGCAGGAGCATGCACGTGTGTGTCAGTGTCAATGTGCGCATGGGCCCGTCTGCACGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599420.5
ENST00000602158.1
CDS CCA 90 bp TCTCTGAGGGCACTCTCCTCCTTGCAGGACTGGATGTGTTTGTTCTaGAACTTGACGTGCTCCAGCCCTCTTTGCCGACGCGACTCACGC +
Preference number: 5 (lower is better)
Translates to: SLRALSSLQDWMCLF*NLTCSSPLCRRDSR
Trigger: GCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GACAAGGTGGAAGATGAGTCTCTCCAGGGAGTTGTGGTTGGCTTCTaGAAGGTGCTCCAGGACGGCATAGATGGCAGCCAGCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DKVEDESLQGVVVGF*KVLQDGIDGSQLLL
Trigger: CAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACTCATCTTCCACCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000682292.1
CDS CCA 90 bp CCTAACCCCACAGAGGGCAGGTGGGGAGGCACTTGCTTGACAAGGTaGAAGATGAGTCTCTCCAGGGAGTTGTGGTTGGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PNPTEGRWGGTCLTR*KMSLSRELWLASGR
Trigger: CCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACTCATCTTCCACCTTGTCAAGCAAGTGCCTCCCCACCTGCCCTCTGTGGGGTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS-3UTR CAA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATATGGTTCCATCTGCGTaGCGCTCCTGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYMVPSA*RSCSRK
Trigger: CTTCCTGCTGCAGGAGCGCAACGCAGATGGAACCAT...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGTTCTTCAGGAGGTaGCCCTCGGTTAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GRCPPHVTLELLILDPSLRFFRR*PSVSSG
Trigger: CCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACCT...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAATCTCCATGGCCTGCTaGAGCCTCTCAAAGTCATGC +
Preference number: 5 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTISMAC*SLSKSC
Trigger: GCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGAT...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACGCAAAAATCTGCTTCTaGGTGGCGGGGAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHAKICF*VAGRKP
Trigger: GGGCTTCCTCCCCGCCACCAAGAAGCAGATTTTTGC...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCATTGAGGAGTGCGTGGTaGATCCGCAGCACAATCCAG +
Preference number: 5 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPLRSAW*IRSTIQ
Trigger: CTGGATTGTGCTGCGGATCAACCACGCACTCCTCAA...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGTCTTCCACGTCCTTCTaGTTGAGGAGTGCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LLQPLASGRVTATFKSPWSSTSF*LRSAWL
Trigger: CAACCACGCACTCCTCAACAAGAAGGACGTGGAAGA...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCTGTTGCTGTTTGAACTaGGCCAGCAGGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GLVASALTAHVQVIRETGCCCLN*ASRVWL
Trigger: GAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACA...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGATGAGTTTCAGGGACTaGGAGTCCAGTAGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAMSFRD*ESSRFF
Trigger: AAAGAACCTACTGGACTCCAAGTCCCTGAAACTCAT...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCAGGGCACTCTCCTCCTaGCAGGACTGGATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLRALSS*QDWMCL
Trigger: CAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCT...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTGGGTAGTGCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACACTCTGTGGGCTGCTTTaGAGATGTGTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VGSAKSSLLQPLASGRVTLCGLL*RCVLSL
Trigger: GAGGCTGAGAACACATCTCAAAAGCAGCCCACAGAG...TGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGCACTACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGTTGCCTCCTGGTTCCTaGGTGCGCTTCTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGLPPGS*VRFSPA
Trigger: TGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAA...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGGTACTTGAGCTCATaGGCGTTGGTGATCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GLVASALTAHVQVIRETGRYLSS*ALVIWR
Trigger: CCGCCAGATCACCAACGCCAATGAGCTCAAGTACCT...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCGCCCAGCTAACTCGTCCAGGTACTaGAGCTCATTGGCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SGSFSEGRTLALQLWRPANSSRY*SSLALV
Trigger: CACCAACGCCAATGAGCTCAAGTACCTGGACGAGTT...AGCTGGGCGCCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCGGAGGTCATTTATCTaGTTGAGCAGGAACTCGTCC +
Preference number: 5 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKRRSFI*LSRNSS
Trigger: GGACGAGTTCCTGCTCAACAAGATAAATGACCTCCG...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTGGGAAGTTCTCCAGCTaGACTGCTGCGGGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TWGRCPPHVTLELLILDPGKFSS*TAAGSV
Trigger: GACAGACCCCGCAGCAGTCAAGCTGGAGAACTTCCC...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACCCCATCGAGCAGGGCCACCTaGACAAGGTGGAAGATGAGT +
Preference number: 5 (lower is better)
Translates to: VTQVSKTLMEGPSPLATPSSRAT*TRWKMS
Trigger: ACTCATCTTCCACCTTGTCAAGGTGGCCCTGCTCGA...TGGGGTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCCAGGTGACATGCGGTaGACATCCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEPGDMR*TSSSRA
Trigger: GGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACAGGTGCGTCCATGATTaGGGGGCTGCGTGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: PHVTLELLILDPSLRAEHRCVHD*GAACEG
Trigger: CCCCTCGCACGCAGCCCCCAAATCATGGACGCACCT...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGTCTTGCTTCTCCTCCTaGATGGACTGGATCCGTTCA +
Preference number: 5 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKSCFSS*MDWIRS
Trigger: TGAACGGATCCAGTCCATCAAGGAGGAGAAGCAAGA...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594824.5
ENST00000597073.5
CDS TCA 90 bp GTGCCCGGGCAGCAGCTCTTAGGTTTGGTCTCAGGACCACACTATTaGTGTGGGCCCAGTGGAATGAGGTGGGTTTGCACCTTGCACACA +
Preference number: 5 (lower is better)
Translates to: VPGQQLLGLVSGPHY*CGPSGMRWVCTLHT
Trigger: TGTGTGCAAGGTGCAAACCCACCTCATTCCACTGGGCCCACATCAATAGTGTGGTCCTGAGACCAAACCTAAGAGCTGCTGCCCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601490.1
CDS GCA 90 bp GCCTACTCACAGCACGCTCCTGCTTCCGCTTCTTCTTCTGAGCTTTaGTCTGCTTCACTGGCTCGAAGTCGTTCTTGGTGTAGCCACGGG +
Preference number: 5 (lower is better)
Translates to: AYSQHAPASASSSEL*SASLARSRSWCSHG
Trigger: CCCGTGGCTACACCAAGAACGACTTCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAAGCAGGAGCGTGCTGTGAGTAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599420.5
CDS CCA 90 bp AGGCACGAGACTGCCTCTTCCACGTCCTTCTTGTTGAGGAGTGCGTaGTTGATCCGCAGCACAATCCAGTCGAACAGGGCGCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: RHETASSTSFLLRSA*LIRSTIQSNRALYR
Trigger: TCTGTACAGCGCCCTGTTCGACTGGATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GCTCTTAGGTTTGGTCTCAGGACCACACTATTGATGTGGGCCCAGTaGAATGAGGTGGGTTTGCACCTTGCACACAGCGCTGGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: ALRFGLRTTLLMWAQ*NEVGLHLAHSAGSG
Trigger: CCCGGAACCAGCGCTGTGTGCAAGGTGCAAACCCACCTCATTCCACTGGGCCCACATCAATAGTGTGGTCCTGAGACCAAACCTAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601490.1
CDS-3UTR CAA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTGCACAGGCGAGTCGTaGGCGTCCAGCACCCATTCC +
Preference number: 5 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLACTGES*ASSTHS
Trigger: GGAATGGGTGCTGGACGCCAACGACTCGCCTGTGCA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGATGGTTCCATCTGCGTaGCGCTCCTGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLMVPSA*RSCSRK
Trigger: CTTCCTGCTGCAGGAGCGCAACGCAGATGGAACCAT...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTGCATATGCACGTACTaGATGGTTCCATCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVACICTY*MVPSAL
Trigger: CAACGCAGATGGAACCATCAAGTACGTGCATATGCA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCTGCAGGAAGCGGTGCTaGAGGTTCTTCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LVASALTAHVQVIRETGSCRKRC*RFFRRL
Trigger: CAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCA...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGGTACGTGTAGATCTTTaGTTGCAGGAAGCGGTGCTT +
Preference number: 5 (lower is better)
Translates to: SQICGHVSRCLGEWAKPEVRVDL*LQEAVL
Trigger: AAGCACCGCTTCCTGCAACAAAAGATCTACACGTAC...CTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGAGGAACTTAAAGGGGTaGATGGCCACCAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRNLKG*MATRML
Trigger: GAGCATCCTGGTGGCCATCAACCCCTTTAAGTTCCT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGGAACTTAAAGGGGTaGATGGCCACCAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: GLVASALTAHVQVIRETGRNLKG*MATRML
Trigger: GAGCATCCTGGTGGCCATCAACCCCTTTAAGTTCCT...GCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGTTGAGGAGTGCGTGGTaGATCCGCAGCACAATCCAG +
Preference number: 5 (lower is better)
Translates to: LCTWGRCPPHVTLELLILLRSAW*IRSTIQ
Trigger: CTGGATTGTGCTGCGGATCAACCACGCACTCCTCAA...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGTCCACGTCCTTCTTGTaGAGGAGTGCGTGGTTGATC +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMSTSFL*RSAWLI
Trigger: GATCAACCACGCACTCCTCAACAAGAAGGACGTGGA...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGTCCACGTCCTTCTTGTaGAGGAGTGCGTGGTTGATC +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLSTSFL*RSAWLI
Trigger: GATCAACCACGCACTCCTCAACAAGAAGGACGTGGA...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp CCCTTGTCCCAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGTGCCAGGGCAATCCTTaGATGCTCTTGATCATTTGG +
Preference number: 5 (lower is better)
Translates to: PLSQICGHVSRCLGEWAKCQGNP*MLLIIW
Trigger: CCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCA...CTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTGGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGAGGGCACTCTCCTCCTaGCAGGACTGGATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: DAQWPSGFCSDSSRPGYKRALSS*QDWMCL
Trigger: CAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCT...CTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGCCTCCTCTGTGGGCTGCTTTaGAGATGTGTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ESLAPILSHGVGSAKSSLLCGLL*RCVLSL
Trigger: GAGGCTGAGAACACATCTCAAAAGCAGCCCACAGAG...GAGGCTGCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGGTTTCTTCAGAGACCTaGCCAACTGCCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: WPSGFCSDSSRPGYKGDGVSSET*PTAMAW
Trigger: CCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAAC...CCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACGGGCTGCCACATGGTTaGCTCTTGTCCTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: PHVTLELLILDPSLRAEHGLPHG*LLSSGV
Trigger: GACCCCCGAGGACAAGAGCAAACCATGTGGCAGCCC...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGAGTGGGGAGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGGTGATCTTCCCAATCTaGACATTTCGGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GVGRCEAAGGDVVLPTGAVIFPI*TFRFFF
Trigger: GAAGAAGAACCGAAATGTCAAGATTGGGAAGATCAC...CGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCTCCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTTGAGCTCATTGGCGTaGGTGATCTGGCGGAACACC +
Preference number: 5 (lower is better)
Translates to: KSSLLQPLASGRVTATFKLSSLA*VIWRNT
Trigger: GGTGTTCCGCCAGATCACCAACGCCAATGAGCTCAA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCAGTGACTGGAAGAGGTaGAGGACCAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSSDWKR*RTRLVS
Trigger: GGACACCAACCTGGTCCTCAACCTCTTCCAGTCACT...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATATGGGCACCGAGGCCTaGTCGCTGGTCAGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHMGTEA*SLVRLS
Trigger: AGACAGCCTGACCAGCGACAAGGCCTCGGTGCCCAT...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACACGCACGTGGTGATCTaGAGGACGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHTHVVI*RTSFML
Trigger: CAGCATGAAGGACGTCCTCAAGATCACCACGTGCGT...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCACGCACGTGGTGATCTaGAGGACGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: PMEGSSMCKNAHWPGGCPTHVVI*RTSFML
Trigger: CAGCATGAAGGACGTCCTCAAGATCACCACGTGCGT...GGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAACGCACGTGGTGATCTaGAGGACGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKTHVVI*RTSFML
Trigger: CAGCATGAAGGACGTCCTCAAGATCACCACGTGCGT...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGATGTGAGGCCGCAGGTGGAGATGTGGTGCTCCCCACAGGTGCGTCCATGATTTTCCTCATCTGCTCCTaGATCAGCATCTCCACGCAC +
Preference number: 5 (lower is better)
Translates to: RCEAAGGDVVLPTGASMIFLICS*ISISTH
Trigger: GTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGAA...AATCATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGCCTCACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp TCAGACGCGCAGTGGCCTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAGGCCATGGAGCATTTaGTCGCAGGAGCGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: SDAQWPSGFCSDSSRPGYRPWSI*SQERKP
Trigger: AGGCTTTCGCTCCTGCGACAAAATGCTCCATGGCCT...ATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAGGCCACTGCGCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CAGATTTGTGGCCACGTGTCCAGGTGTCTGGGGGAGTGGGCCAAGCCTGAGAGAGACGAAAACCCCAGTTaGAGAGGCCATGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: QICGHVSRCLGEWAKPERDENPS*RGHGAF
Trigger: AAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGTC...TCTCTCAGGCTTGGCCCACTCCCCCAGACACCTGGACACGTGGCCACAAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCTCGGACATGCAGACTTaGTCAGCTGTGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPSDMQT*SAVALS
Trigger: GCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGA...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCCCCTTGTCCCAGATTaGTGGCCACGTGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEPLVPD*WPRVQV
Trigger: CACCTGGACACGTGGCCACAAATCTGGGACAAGGGG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCCAAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCTCTTGCTTCTCCTCCTaGATGGACTGGATCCGTTCA +
Preference number: 5 (lower is better)
Translates to: AKSSLLQPLASGRVTATFSCFSS*MDWIRS
Trigger: TGAACGGATCCAGTCCATCAAGGAGGAGAAGCAAGA...GAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594824.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGCCGGTAGGTGATGTCTaGCTTCTCCTCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWPVGDV*LLLLDG
Trigger: TCCATCAAGGAGGAGAAGCAAGACATCACCTACCGG...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597073.5
CDS GCA 90 bp TGGAGCCGACTGAGGGACTGGAGAAGGCTACGGGGGTCCTCGCCCTaGCAGGGCAATCCTTTGATGCTCTTGATCATTTGGTTATGCAAA +
Preference number: 5 (lower is better)
Translates to: WSRLRDWRRLRGSSP*QGNPLMLLIIWLCK
Trigger: TTTGCATAACCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGGCGAGGACCCCCGTAGCCTTCTCCAGTCCCTCAGTCGGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000601749.1
ENST00000682292.1
CDS GCA 90 bp ATTGGAACGGATGCAGCGGATAAAGAAGGGCTCCGCCTTCCCCAGTaGCTCCAAGAGCTTGTTAAGGGATGTCTGGAACTGGGCGCTGAT +
Preference number: 5 (lower is better)
Translates to: IGTDAADKEGLRLPQ*LQELVKGCLELGAD
Trigger: ATCAGCGCCCAGTTCCAGACATCCCTTAACAAGCTCTTGGAGGCACTGGGGAAGGCGGAGCCCTTCTTTATCCGCTGCATCCGTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000601490.1
ENST00000601749.1
ENST00000602177.1
ENST00000682292.1
CDS CCA 90 bp ATGCAAATCGCGGTAAAGTTTTTCCGAAGGGGTGCTGGCTCCTCTTaGCAGCTCTTCTGGGTGACTTTGGGCACCAGGGCTGCTCATACC +
Preference number: 5 (lower is better)
Translates to: MQIAVKFFRRGAGSS*QLFWVTLGTRAAHT
Trigger: GGTATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAACTTTACCGCGATTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000682292.1
CDS CCA 90 bp AGTGAGACTTCTCTAGGAATCCCATGGGACAGAGTGGTGGTCATGTaGCCGATTAGTCGTCCTGAGCACAGAAGGTCAGCAGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SETSLGIPWDRVVVM*PISRPEHRRSAGKG
Trigger: CCCCTTGCCTGCTGACCTTCTGTGCTCAGGACGACTAATCGGCCACATGACCACCACTCTGTCCCATGGGATTCCTAGAGAAGTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597572.1
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGCGTGTAGATCTTTTGTaGCAGGAAGCGGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRVDLL*QEAVLE
Trigger: CTCAAGCACCGCTTCCTGCAACAAAAGATCTACACG...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGCGTGTAGATCTTTTGTaGCAGGAAGCGGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLRVDLL*QEAVLE
Trigger: CTCAAGCACCGCTTCCTGCAACAAAAGATCTACACG...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTAGGAACTTAAAGGGGTaGATGGCCACCAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGRNLKG*MATRML
Trigger: GAGCATCCTGGTGGCCATCAACCCCTTTAAGTTCCT...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCTTGAGCTGAAATTCTaGGCGCTCTTCCTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: VRKSDSHIQVSLAREVHGLELKF*ALFLAD
Trigger: GTCAGCGAGGAAGAGCGCCAAGAATTTCAGCTCAAG...ACCATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGGCAAAAATCTGCTTCTaGGTGGCGGGGAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWAKICF*VAGRKP
Trigger: GGGCTTCCTCCCCGCCACCAAGAAGCAGATTTTTGC...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCGTCACCGTTTTTCTTTaGGTCAGAACCTCCACCAAG +
Preference number: 5 (lower is better)
Translates to: SLLQPLASGRVTATFKSPVTVFL*VRTSTK
Trigger: CTTGGTGGAGGTTCTGACCAAAAGAAAAACGGTGAC...GGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTAGTGGCTTCTGCTCTGACAGCTCACGTCCAGGTTATAAGGGAGACGGGCAGCTCTTCCACGTCCTTCTaGTTGAGGAGTGCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LVASALTAHVQVIRETGSSSTSF*LRSAWL
Trigger: CAACCACGCACTCCTCAACAAGAAGGACGTGGAAGA...GCTGCCCGTCTCCCTTATAACCTGGACGTGAGCTGTCAGAGCAGAAGCCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGAGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCTGTTGCTGTTTGAACTaGGCCAGCAGGGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GDMCQRGTGQVTQVSKTLCCCLN*ASRVWL
Trigger: GAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACA...GAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGGTGGCTTTTTCTTCTaGTGCAGGTGCAGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPGGFFF*CRCSRD
Trigger: GTCCCTACTGCACCTGCACAAGAAGAAAAAGCCACC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCAGCTCCAGTGCAGGGGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTTCTTTCTTTTCAGCATaGGAACGGATGCAGCGGATA +
Preference number: 5 (lower is better)
Translates to: PAPVQGPSSDMQTLSAVASFFSA*ERMQRI
Trigger: TATCCGCTGCATCCGTTCCAATGCTGAAAAGAAAGA...AGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCCCCTGCACTGGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTCTCTGCTCTCCTTTTaGTCTTCCAGGAGACTCACC +
Preference number: 5 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQSLLSF*SSRRLT
Trigger: GGTGAGTCTCCTGGAAGACAAAAAGGAGAGCAGAGA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp TCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGCCCATTGGCCACTTGTGCACGCACTTCTaGTGGCAGGTCATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: SGDPSVQNSHGGSQPIGHLCTHF*WQVILH
Trigger: GTGCAAGATGACCTGCCACAAGAAGTGCGTGCACAA...GTGGCCAATGGGCTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGACGCACGTGGTGATCTaGAGGACGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLTHVVI*RTSFML
Trigger: CAGCATGAAGGACGTCCTCAAGATCACCACGTGCGT...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AAAAGCAGCCTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTTCCTCATCTGCTCCTaGATCAGCATCTCCACGCAC +
Preference number: 5 (lower is better)
Translates to: KSSLLQPLASGRVTATFKFLICS*ISISTH
Trigger: GTGCGTGGAGATGCTGATCAAGGAGCAGATGAGGAA...CTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAGGCTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTGGATGTCCCGGGTCTaGGGGCTCTTGTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: PHVTLELLILDPSLRAEHWMSRV*GLLFRT
Trigger: GGTCCTGAACAAGAGCCCCAAGACCCGGGACATCCA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACCTCGTCCGAGCCCCTaGGGTCCAGCTCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTPRPSP*GPAPAA
Trigger: GGCTGCCGGAGCTGGACCCAAGGGGCTCGGACGAGG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp CTCTGCACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGCCGGTAGGTGATGTCTaGCTTCTCCTCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: LCTWGRCPPHVTLELLILPVGDV*LLLLDG
Trigger: TCCATCAAGGAGGAGAAGCAAGACATCACCTACCGG...CAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594824.5
ENST00000597073.5
CDS TCA 90 bp GGAACTGTGAGTAACAAACTCTCTTTCCAAGAGGCAGTTGCATCCTaGCCAGTTGGCTTCGCAGTACCTCCAGCACAGGGCCAGCACCCA +
Preference number: 5 (lower is better)
Translates to: GTVSNKLSFQEAVAS*PVGFAVPPAQGQHP
Trigger: TGGGTGCTGGCCCTGTGCTGGAGGTACTGCGAAGCCAACTGGTCAGGATGCAACTGCCTCTTGGAAAGAGAGTTTGTTACTCACAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS GCA 90 bp ACATTGACACTGACACACACGTGCATGCTCCTGCCAATGTTCGCCTaGTCGGACTCTCATCTATGTGCAGCCTACTCACAGCACGCTCCT +
Preference number: 5 (lower is better)
Translates to: TLTLTHTCMLLPMFA*SDSHLCAAYSQHAP
Trigger: AGGAGCGTGCTGTGAGTAGGCTGCACATAGATGAGAGTCCGAGCAGGCGAACATTGGCAGGAGCATGCACGTGTGTGTCAGTGTCAATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599420.5
ENST00000602158.1
CDS CCA 90 bp ACCCTTCTGGAAGGTTCTCTGAGGGCACTCTCCTCCTTGCAGGACTaGATGTGTTTGTTCTGGAACTTGACGTGCTCCAGCCCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TLLEGSLRALSSLQD*MCLFWNLTCSSPLC
Trigger: GCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAGAGAACCTTCCAGAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GATCTTCCCAATCTTGACATTTCGGTTCTTCTTCCCTTTGCCTCCTaGTTCCTTGGTGCGCTTCTCACCTGCAGCGTGGCGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DLPNLDISVLLPFAS*FLGALLTCSVAMLL
Trigger: CAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAACCGAAATGTCAAGATTGGGAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGTGCATATGCACGTACTaGATGGTTCCATCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWCICTY*MVPSAL
Trigger: CAACGCAGATGGAACCATCAAGTACGTGCATATGCA...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGGGTACGTGTAGATCTTTaGTTGCAGGAAGCGGTGCTT +
Preference number: 5 (lower is better)
Translates to: AVLGHADFVSCGSQPLVWVRVDL*LQEAVL
Trigger: AAGCACCGCTTCCTGCAACAAAAGATCTACACGTAC...CCAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCTTGAGCTGAAATTCTaGGCGCTCTTCCTCGCTGAC +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLLELKF*ALFLAD
Trigger: GTCAGCGAGGAAGAGCGCCAAGAATTTCAGCTCAAG...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGATCTCCATGGCCTGCTaGAGCCTCTCAAAGTCATGC +
Preference number: 5 (lower is better)
Translates to: GRCPPHVTLELLILDPSLISMAC*SLSKSC
Trigger: GCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGAT...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGCAAAAATCTGCTTCTaGGTGGCGGGGAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPAKICF*VAGRKP
Trigger: GGGCTTCCTCCCCGCCACCAAGAAGCAGATTTTTGC...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGGTCACCGTTTTTCTTTaGGTCAGAACCTCCACCAAG +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMVTVFL*VRTSTK
Trigger: CTTGGTGGAGGTTCTGACCAAAAGAAAAACGGTGAC...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATTCCTGGAACGTGTACTaGGCGCTGTACCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHSWNVY*ALYPDL
Trigger: GAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGGA...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCTGTTTGTTCTGGAACTaGACGTGCTCCAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSCLFWN*TCSSPL
Trigger: AAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACA...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGAGGTACTTGAGCTCATaGGCGTTGGTGATCTGGCGG +
Preference number: 5 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMERYLSS*ALVIWR
Trigger: CCGCCAGATCACCAACGCCAATGAGCTCAAGTACCT...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTTGTGCACGCACTTCTaGTGGCAGGTCATCTTGCAC +
Preference number: 5 (lower is better)
Translates to: TWGRCPPHVTLELLILDPLCTHF*WQVILH
Trigger: GTGCAAGATGACCTGCCACAAGAAGTGCGTGCACAA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGACGAAAACCCCAGTTaGAGAGGCCATGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPDENPS*RGHGAF
Trigger: AAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGTC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCGACGAAAACCCCAGTTaGAGAGGCCATGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSDENPS*RGHGAF
Trigger: AAATGCTCCATGGCCTCTCAAACTGGGGTTTTCGTC...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp ACTTGGGGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCCTCCTTCTCCTCCTaGATGGACTGGATCCGTTCA +
Preference number: 5 (lower is better)
Translates to: TWGRCPPHVTLELLILDPSSFSS*MDWIRS
Trigger: TGAACGGATCCAGTCCATCAAGGAGGAGAAGGAGGA...AGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS-3UTR CAA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGCCAGAGATCCCCAGGTaGTCCCTGTTGACCTATAGG +
Preference number: 5 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMEPEIPR*SLLTYR
Trigger: CCTATAGGTCAACAGGGACAACCTGGGGATCTCTGG...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS CCA 90 bp TTTCTTCAGAGACCTTGCCAACTGCCATGGCCTGGGGTTGCTCTGTaGGCTGCTTTTGAGATGTGTTCTCAGCCTCCGTCTCTACGACTA +
Preference number: 5 (lower is better)
Translates to: FLQRPCQLPWPGVAL*AAFEMCSQPPSLRL
Trigger: TAGTCGTAGAGACGGAGGCTGAGAACACATCTCAAAAGCAGCCCACAGAGCAACCCCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCATGCAGGAAGCGGTGCTaGAGGTTCTTCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPCRKRC*RFFRRL
Trigger: CAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCA...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGCGTGTAGATCTTTTGTaGCAGGAAGCGGTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: GRCPPHVTLELLILDPSLRVDLL*QEAVLE
Trigger: CTCAAGCACCGCTTCCTGCAACAAAAGATCTACACG...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGATCTCCATGGCCTGCTaGAGCCTCTCAAAGTCATGC +
Preference number: 5 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWISMAC*SLSKSC
Trigger: GCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGAT...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGCACGTGAGGTCCATGAGGATAAGCTTGTCGTaGACGGTCACCGTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: ASGRVTATFKSPWHVRSMRISLS*TVTVFL
Trigger: AAGAAAAACGGTGACCGTCAACGACAAGCTTATCCT...CATGGACCTCACGTGCCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGTCCTCATGTTGCTGTTaGAACTTGGCCAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: MCQRGTGQVTQVSKTLMESSCCC*NLASRV
Trigger: GACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGA...CTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCAGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAATGCCAGGGCAATCCTTaGATGCTCTTGATCATTTGG +
Preference number: 5 (lower is better)
Translates to: AVLSRWLLFCHTGWVVPKCQGNP*MLLIIW
Trigger: CCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCA...TTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATGGAGGGTCCCAGTCTTTCTTTTCAGCATaGGAACGGATGCAGCGGATA +
Preference number: 5 (lower is better)
Translates to: ERHGSGDPSVQNSHGGSQSFFSA*ERMQRI
Trigger: TATCCGCTGCATCCGTTCCAATGCTGAAAAGAAAGA...CTGGGACCCTCCATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGGTGCCCACCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGTGTTTGTTCTGGAACTaGACGTGCTCCAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GRCPPHVTLELLILDPSLCLFWN*TCSSPL
Trigger: AAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACA...CAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGGTGGGCACCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGCTCTGTGGGCTGCTTTaGAGATGTGTTCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWLCGLL*RCVLSL
Trigger: GAGGCTGAGAACACATCTCAAAAGCAGCCCACAGAG...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CTCCTGCAGCCCTTGGCGTCCGGAAGAGTGACAGCCACATTCAAGTCTCCCTGGACAGAGTACATCGTTTaGATGTTGCTCCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: LLQPLASGRVTATFKSPWTEYIV*MLLLNF
Trigger: GAAGTTCAGGAGCAACATCAAAACGATGTACTCTGT...CCAGGGAGACTTGAATGTGGCTGTCACTCTTCCGGACGCCAAGGGCTGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGTGACTGGAAGAGGTaGAGGACCAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLASDWKR*RTRLVS
Trigger: GGACACCAACCTGGTCCTCAACCTCTTCCAGTCACT...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATAGTCTCTCCAGGGAGTaGTGGTTGGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHSLSRE*WLASGR
Trigger: CCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACT...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTCGAGCAGGGCCACCTaGACAAGGTGGAAGATGAGT +
Preference number: 5 (lower is better)
Translates to: PHVTLELLILDPSLRAEHSSRAT*TRWKMS
Trigger: ACTCATCTTCCACCTTGTCAAGGTGGCCCTGCTCGA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACAGGCCATGGAGCATTTaGTCGCAGGAGCGAAAGCCT +
Preference number: 5 (lower is better)
Translates to: PHVTLELLILDPSLRAEHRPWSI*SQERKP
Trigger: AGGCTTTCGCTCCTGCGACAAAATGCTCCATGGCCT...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp AGACATGTGTCAGAGAGGCACGGGTCAGGTGACCCAAGTGTCCAAAACTCTCATCCAGAGATCCCCAGGTaGTCCCTGTTGACCTATAGG +
Preference number: 5 (lower is better)
Translates to: RHVSERHGSGDPSVQNSHPEIPR*SLLTYR
Trigger: CCTATAGGTCAACAGGGACAACCTGGGGATCTCTGG...ATGAGAGTTTTGGACACTTGGGTCACCTGACCCGTGCCTCTCTGACACATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGGTACGTGTAGATCTTTaGTTGCAGGAAGCGGTGCTT +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLVRVDL*LQEAVL
Trigger: AAGCACCGCTTCCTGCAACAAAAGATCTACACGTAC...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCTCACGTCACTCTTGAGCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTCCTCATGTTGCTGTTaGAACTTGGCCAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PHVTLELLILDPSLRAEHSSCCC*NLASRV
Trigger: GACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGA...GTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGCTCAAGAGTGACGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCTCCTCATGTTGCTGTTaGAACTTGGCCAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLASSCCC*NLASRV
Trigger: GACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGA...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AGTCCTGAGTCGCTGGCTCCTATTCTGTCACACGGGGTGGGTAGTGCCAAAAGCTCTTTCTTTTCAGCATaGGAACGGATGCAGCGGATA +
Preference number: 5 (lower is better)
Translates to: SPESLAPILSHGVGSAKSSFFSA*ERMQRI
Trigger: TATCCGCTGCATCCGTTCCAATGCTGAAAAGAAAGA...GCTTTTGGCACTACCCACCCCGTGTGACAGAATAGGAGCCAGCGACTCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCCGTCCTCGGACATGCAGACTTTGTCAGCTGTGGCTCTCAGCCATTGGTCTGACAGAGTACATCGTTTaGATGTTGCTCCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: GRPRTCRLCQLWLSAIGLTEYIV*MLLLNF
Trigger: GAAGTTCAGGAGCAACATCAAAACGATGTACTCTGT...CAGACCAATGGCTGAGAGCCACAGCTGACAAAGTCTGCATGTCCGAGGACGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397274.6
ENST00000595618.5
CDS TCA 90 bp ATTGGCGTTGGTGATCTGGCGGAACACCGATTCCCGCCACTTCTCTaGCACTGTGATCTTCCCAATCTTGACATTTCGGTTCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: IGVGDLAEHRFPPLL*HCDLPNLDISVLLP
Trigger: GGGAAGAAGAACCGAAATGTCAAGATTGGGAAGATCACAGTGTCAGAGAAGTGGCGGGAATCGGTGTTCCGCCAGATCACCAACGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 90 bp AGGAAGCCCACCATCTCCATGGCCTGCTTGAGCCTCTCAAAGTCATaGTTCAGGTCCTCCCCATCTTCAATCTTCAAGTTATGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RKPTISMACLSLSKS*FRSSPSSIFKLCWL
Trigger: CAACCAGCATAACTTGAAGATTGAAGATGGGGAGGACCTGAAGCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGATGGTGGGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 90 bp GATCTGATATTTCACCTTCCCTGCGAAGTGCTGGATGATGAAAGCTaGCTCCATGACCGGGGTGCCCAGGAAGTACTTATTGTCCTCATG +
Preference number: 5 (lower is better)
Translates to: DLIFHLPCEVLDDES*LHDRGAQEVLIVLM
Trigger: CATGAGGACAATAAGTACTTCCTGGGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGTGAAATATCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS-3UTR CAA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCATCTCTGCTCTCCTTTTaGTCTTCCAGGAGACTCACC +
Preference number: 5 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPSLLSF*SSRRLT
Trigger: GGTGAGTCTCCTGGAAGACAAAAAGGAGAGCAGAGA...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACACCACATGGTTTGCTCTaGTCCTCGGGGGTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTPHGLL*SSGVSG
Trigger: CCCCGAGACCCCCGAGGACAAGAGCAAACCATGTGG...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp CCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGCCCCCGTGATCTTCCCAATCTaGACATTTCGGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PWKVPACAKMHIGQVAAPVIFPI*TFRFFF
Trigger: GAAGAAGAACCGAAATGTCAAGATTGGGAAGATCAC...GGGGGCAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCACGGAGGTCATTTATCTaGTTGAGCAGGAACTCGTCC +
Preference number: 5 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPRRSFI*LSRNSS
Trigger: GGACGAGTTCCTGCTCAACAAGATAAATGACCTCCG...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp ATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCATGCATATGCACGTACTaGATGGTTCCATCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: IAQTPMEGSSMCKNAHWPCICTY*MVPSAL
Trigger: CAACGCAGATGGAACCATCAAGTACGTGCATATGCA...TGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGATGAGTTTCAGGGACTaGGAGTCCAGTAGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWMSFRD*ESSRFF
Trigger: AAAGAACCTACTGGACTCCAAGTCCCTGAAACTCAT...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGTGGCTGACAGAGTACATCGTTTaGATGTTGCTCCTGAACTTC +
Preference number: 5 (lower is better)
Translates to: DPHGRFQHVQKCTLARWLTEYIV*MLLLNF
Trigger: GAAGTTCAGGAGCAACATCAAAACGATGTACTCTGT...CAGCCACCTGGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCAGGATAAGCTTGTCGTaGACGGTCACCGTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLARISLS*TVTVFL
Trigger: AAGAAAAACGGTGACCGTCAACGACAAGCTTATCCT...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GCTTTTGATTCTGGATCCTTCTCTGAGGGCCGAACACTAGCTCTGCAGCTCTGGGTGATCTTCCCAATCTaGACATTTCGGTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AFDSGSFSEGRTLALQLWVIFPI*TFRFFF
Trigger: GAAGAAGAACCGAAATGTCAAGATTGGGAAGATCAC...CCAGAGCTGCAGAGCTAGTGTTCGGCCCTCAGAGAAGGATCCAGAATCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp AATAGCCCAGACCCCCATGGAAGGTTCCAGCATGTGCAAAAATGCACATTGGCCGATGCTCTTGATCATTaGGTTATGCAAATCGCGGTA +
Preference number: 5 (lower is better)
Translates to: NSPDPHGRFQHVQKCTLADALDH*VMQIAV
Trigger: TACCGCGATTTGCATAACCAAATGATCAAGAGCATC...GGCCAATGTGCATTTTTGCACATGCTGGAACCTTCCATGGGGGTCTGGGCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS TCA 90 bp TCAAACAAGCCAATCCTAAGCCAGCTTACTCTGCCTAGCACATTCTaGTGCATGAAAATCACAATAAAGTTTCCTGCCTCTCCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SNKPILSQLTLPSTF*CMKITIKFPASPRS
Trigger: GGAGCGGGGAGAGGCAGGAAACTTTATTGTGATTTTCATGCATCAGAATGTGCTAGGCAGAGTAAGCTGGCTTAGGATTGGCTTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS-3UTR CAA 90 bp GTCCAGGTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACAAACTCGTCCAGGTACTaGAGCTCATTGGCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VQVIRETGSVNRKLCTYTNSSRY*SSLALV
Trigger: CACCAACGCCAATGAGCTCAAGTACCTGGACGAGTT...TGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAACTGGCAATGGCGTCCTaGATGACGTCCGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKLAMAS*MTSEVV
Trigger: CACCACCTCGGACGTCATCAAGGACGCCATTGCCAG...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTAGTTTCTTCAGAGACCTaGCCAACTGCCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVVSSET*PTAMAW
Trigger: CCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAAC...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTAAGTCTCTCCAGGGAGTaGTGGTTGGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVSLSRE*WLASGR
Trigger: CCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACT...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAATCGAGCAGGGCCACCTaGACAAGGTGGAAGATGAGT +
Preference number: 5 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKSSRAT*TRWKMS
Trigger: ACTCATCTTCCACCTTGTCAAGGTGGCCCTGCTCGA...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACCAGAGATCCCCAGGTaGTCCCTGTTGACCTATAGG +
Preference number: 5 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVPEIPR*SLLTYR
Trigger: CCTATAGGTCAACAGGGACAACCTGGGGATCTCTGG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
CDS-3UTR CAA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTATCTCTGCTCTCCTTTTaGTCTTCCAGGAGACTCACC +
Preference number: 5 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVSLLSF*SSRRLT
Trigger: GGTGAGTCTCCTGGAAGACAAAAAGGAGAGCAGAGA...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GGCTGTTACAGTTTAAAGTTACGTAAACCACGTACAAAGAAACAGTTAAACGTACGGAGGTCATTTATCTaGTTGAGCAGGAACTCGTCC +
Preference number: 5 (lower is better)
Translates to: GCYSLKLRKPRTKKQLNVRRSFI*LSRNSS
Trigger: GGACGAGTTCCTGCTCAACAAGATAAATGACCTCCG...TACGTTTAACTGTTTCTTTGTACGTGGTTTACGTAACTTTAAACTGTAACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAAGGATAAGCTTGTCGTaGACGGTCACCGTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKRISLS*TVTVFL
Trigger: AAGAAAAACGGTGACCGTCAACGACAAGCTTATCCT...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS-3UTR CAA 90 bp GTTATAAGGGAGACGGGCAGCGTTAATAGAAAACTTTGTACATACACATATAAAGATGCTCTTGATCATTaGGTTATGCAAATCGCGGTA +
Preference number: 5 (lower is better)
Translates to: VIRETGSVNRKLCTYTYKDALDH*VMQIAV
Trigger: TACCGCGATTTGCATAACCAAATGATCAAGAGCATC...TTTATATGTGTATGTACAAAGTTTTCTATTAACGCTGCCCGTCTCCCTTATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
CDS GCA 72 bp CCTCTCGGCCCGCAGGCGTCCGGCCTCCCGAAGCACTaGCATGGCCCGGATAGCAGCCCGGAGCACGGCCCA +
Preference number: 6 (lower is better)
Translates to: PLGPQASGLPKH*HGPDSSPEHGP
Trigger: TGGGCCGTGCTCCGGGCTGCTATCCGGGCCATGGCAGTGCTTCGGGAGGCCGGACGCCTGCGGGCCGAGAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000682292.1
CDS CAA 90 bp GACTGGCTGAGCATGGCACTAGGGCTGGCGGCGGCCACCAGCTTCTaGCCCCGCCACAGTTCCACGGCGCTGGCCAGCCGCTCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: DWLSMALGLAAATSF*PRHSSTALASRSAS
Trigger: GGACGCCGAGCGGCTGGCCAGCGCCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCGCCGCCAGCCCTAGTGCCATGCTCAGCCAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp GTGGTAGGCCGCCTGCTCCCGGCGGCCCGAGCTGCCTaGCTCTTTCACACTCATCCTGCCGGCCGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: VVGRLLPAARAA*LFHTHPAGRLA
Trigger: AGCCAGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGGAGCAGGCGGCCTACCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS GCA 72 bp GCAGGTGGTAGGCCGCCTGCTCCCGGCGGCCCGAGCTaGCTGCCTCTTTCACACTCATCCTGCCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: AGGRPPAPGGPS*LPLSHSSCRPP
Trigger: AGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAGCTCGGGCCGCCGGGAGCAGGCGGCCTACCACCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS GCA 72 bp GGGGGACCTGTCACTTGGCTGCACCTCAGGCTCCGATaGCAGGTGCCCGCCATCCTCCGCTGGCTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GGPVTWLHLRLR*QVPAILRWLRP
Trigger: GGGCCGGAGCCAGCGGAGGATGGCGGGCACCTGGCATCGGAGCCTGAGGTGCAGCCAAGTGACAGGTCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp ACGGCGCTGGCCAGCCGCTCGGCGTCCAGGTACCGCTaGATCTGCGTGGAGCCTCCGGGGCTGTCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TALASRSASRYR*ICVEPPGLSGF
Trigger: AAAGCCCGACAGCCCCGGAGGCTCCACGCAGATCCAGCGGTACCTGGACGCCGAGCGGCTGGCCAGCGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp AGCATGGCACTAGGGCTGGCGGCGGCCACCAGCTTCTaGCCCCGCCACAGTTCCACGGCGCTGGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: SMALGLAAATSF*PRHSSTALASR
Trigger: GCGGCTGGCCAGCGCCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGGCCGCCGCCAGCCCTAGTGCCATGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp CGGCCCAGCGGAACACGGCCACGGGGTCCATGCCGATaGGCTCCCGCACGTAGGAGCTGTCACTGCCCCGCA +
Preference number: 6 (lower is better)
Translates to: RPSGTRPRGPCR*APARRSCHCPA
Trigger: TGCGGGGCAGTGACAGCTCCTACGTGCGGGAGCTCATCGGCATGGACCCCGTGGCCGTGTTCCGCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GCCGTGGCAGGAGGCCACGCTCCACTAGGCGCCGGGTaGCTGTGGCCTGCGCCACCAGCTGCATATGCACGT +
Preference number: 6 (lower is better)
Translates to: AVAGGHAPLGAG*LWPAPPAAYAR
Trigger: ACGTGCATATGCAGCTGGTGGCGCAGGCCACAGCCACCCGGCGCCTAGTGGAGCGTGGCCTCCTGCCACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp TCCGGACCCGGTAGGACCGCCAGCAGGCCTGGATGGTaGCGGCGGCCCGCTTCATCTGCAGGAAGTGCCGAC +
Preference number: 6 (lower is better)
Translates to: SGPGRTASRPGW*RRPASSAGSAD
Trigger: GTCGGCACTTCCTGCAGATGAAGCGGGCCGCCGTCACCATCCAGGCCTGCTGGCGGTCCTACCGGGTCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp CTGCCTGCCTCTTTCACACTCATCCTGCCGGCCGCCTaGCTTCAGCATGCCTCCCAGGCTCGGGGCGCGCGT +
Preference number: 6 (lower is better)
Translates to: LPASFTLILPAA*LQHASQARGAR
Trigger: ACGCGCGCCCCGAGCCTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGATGAGTGTGAAAGAGGCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000682292.1
CDS CCA 72 bp CCAGCCGCTCGGCGTCCAGGTACCGCTGGATCTGCGTaGAGCCTCCGGGGCTGTCGGGCTTTTCCTGAACCC +
Preference number: 6 (lower is better)
Translates to: PAARRPGTAGSA*SLRGCRAFPEP
Trigger: GGGTTCAGGAAAAGCCCGACAGCCCCGGAGGCTCCACGCAGATCCAGCGGTACCTGGACGCCGAGCGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp CCACCAGCTTCTTGCCCCGCCACAGTTCCACGGCGCTaGCCAGCCGCTCGGCGTCCAGGTACCGCTGGATCT +
Preference number: 6 (lower is better)
Translates to: PPASCPATVPRR*PAARRPGTAGS
Trigger: AGATCCAGCGGTACCTGGACGCCGAGCGGCTGGCCAGCGCCGTGGAACTGTGGCGGGGCAAGAAGCTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GGCCGGCAGCCGGAGGACCCTCGCCCTGGGGCCTGCTaGGATGGACGGGAAGGAGAAAAGCAGACGCTACCT +
Preference number: 6 (lower is better)
Translates to: GRQPEDPRPGAC*DGREGEKQTLP
Trigger: AGGTAGCGTCTGCTTTTCTCCTTCCCGTCCATCCCAGCAGGCCCCAGGGCGAGGGTCCTCCGGCTGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597073.5
ENST00000597572.1
CDS CAA 90 bp TGTGCCCGCCGGGGCCATAGCAGCACCCGGTGCACAGGCGAGTCGTaGGCGTCCAGCACCCATTCCTCGCCTCCCGACTCTTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: CARRGHSSTRCTGES*ASSTHSSPPDSLTS
Trigger: GGAGGTCAAAGAGTCGGGAGGCGAGGAATGGGTGCTGGACGCCAACGACTCGCCTGTGCACCGGGTGCTGCTATGGCCCCGGCGGGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp GCCGGAGCTCCCGAGTGCGGTTGGCAGCACCCGACTTaGGGTAGAGGCCCTCGGTGTACAGGCCGTGCATCT +
Preference number: 6 (lower is better)
Translates to: AGAPECGWQHPT*GRGPRCTGRAS
Trigger: AGATGCACGGCCTGTACACCGAGGGCCTCTACCGCAAGTCGGGTGCTGCCAACCGCACTCGGGAGCTCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS CCA 72 bp ATGAAGGCGCGGGGTTTCTGGAGCCGACTGAGGGACTaGAGAAGGCTACGGGGGTCCTCGCCCTGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: MKARGFWSRLRD*RRLRGSSPCQG
Trigger: GCCCTGGCAGGGCGAGGACCCCCGTAGCCTTCTCCAGTCCCTCAGTCGGCTCCAGAAACCCCGCGCCTTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000601749.1
ENST00000682292.1
CDS CAA 72 bp CGGGGCCATAGCAGCACCCGGTGCACAGGCGAGTCGTaGGCGTCCAGCACCCATTCCTCGCCTCCCGACTCT +
Preference number: 6 (lower is better)
Translates to: RGHSSTRCTGES*ASSTHSSPPDS
Trigger: AGAGTCGGGAGGCGAGGAATGGGTGCTGGACGCCAACGACTCGCCTGTGCACCGGGTGCTGCTATGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp TCGGGGAGGTTACACAGGTCATCAAAGTCCGCCTGCTaGCGTGGCAGGAGGCCACGCTCCACTAGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: SGRLHRSSKSAC*RGRRPRSTRRR
Trigger: CCGGCGCCTAGTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGACCTGTGTAACCTCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CTCTGCAGCAGCAGGATTTTCCGCACCACCTCCCGGTaGAGCGTCTCCTGCAGGGCTTGCCGCTCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: LCSSRIFRTTSR*SVSCRACRSVS
Trigger: GGAGACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCGGAAAATCCTGCTGCTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CAGCAGGCCTGGATGGTGACGGCGGCCCGCTTCATCTaGAGGAAGTGCCGACGCTCCAGCACCATCCGGAAC +
Preference number: 6 (lower is better)
Translates to: QQAWMVTAARFI*RKCRRSSTIRN
Trigger: GTTCCGGATGGTGCTGGAGCGTCGGCACTTCCTGCAGATGAAGCGGGCCGCCGTCACCATCCAGGCCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GGGGCCATAGCAGCACCCGGTGCACAGGCGAGTCGTTaGCGTCCAGCACCCATTCCTCGCCTCCCGACTCTT +
Preference number: 6 (lower is better)
Translates to: GAIAAPGAQASR*RPAPIPRLPTL
Trigger: AAGAGTCGGGAGGCGAGGAATGGGTGCTGGACGCCAACGACTCGCCTGTGCACCGGGTGCTGCTATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TTCGCAGTACCTCCAGCACAGGGCCAGCACCCAGGATaGTCCTCTCGACGCCGCTGGCGTAGCCCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: FAVPPAQGQHPG*SSRRRWRSPSG
Trigger: GCCAGAAGGGCTACGCCAGCGGCGTCGAGAGGACCATCCTGGGTGCTGGCCCTGTGCTGGAGGTACTGCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS CAA 90 bp AGGCTGGCAATGGCGTCCTTGATGACGTCCGAGGTGGTGCTGTCCTaGGTGGCAGTCACGCGGCACGAGGCCTGGCTCTCGGTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: RLAMASLMTSEVVLS*VAVTRHEAWLSVVD
Trigger: GTCCACCACCGAGAGCCAGGCCTCGTGCCGCGTGACTGCCACCAAGGACAGCACCACCTCGGACGTCATCAAGGACGCCATTGCCAGCCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp AGCTCGGGGAGGTTACACAGGTCATCAAAGTCCGCCTaGTGCCGTGGCAGGAGGCCACGCTCCACTAGGCGC +
Preference number: 6 (lower is better)
Translates to: SSGRLHRSSKSA*CRGRRPRSTRR
Trigger: GCGCCTAGTGGAGCGTGGCCTCCTGCCACGGCAGCAGGCGGACTTTGATGACCTGTGTAACCTCCCCGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CGCACCACCTCCCGGTGCAGCGTCTCCTGCAGGGCTTaGCGCTCCGTCTCCTTCAGGAAGACCTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: RTTSRCSVSCRA*RSVSFRKTLVF
Trigger: GAAGACCAAGGTCTTCCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CGCCTGACCCTGTCCGCCCTCCTCAGCACCTGCTCTTaGGGCTTCCAGGGCTTCCCTCTCCTTCTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RLTLSALLSTCS*GFQGFPLLLFC
Trigger: GCAGAAGAGAAGGAGAGGGAAGCCCTGGAAGCCGCAAGAGCAGGTGCTGAGGAGGGCGGACAGGGTCAGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp GCCCTCTTTGCCGACGCGACTCACGCTTCTCCCGGCTaGTGGGGACTTTCTCGTGACTTTCAGCCGCCACGG +
Preference number: 6 (lower is better)
Translates to: ALFADATHASPG*WGLSRDFQPPR
Trigger: CCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp AGAGCCCGGGGACAGCCCTGCGTCTGGGAGGGAGGATaGGTCGCCTGGCTTCTTCTTCTGGACAGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: RARGQPCVWEGG*VAWLLLLDSWL
Trigger: AAGCCAGCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp GGTTCCTTGGTGCGCTTCTCACCTGCAGCGTGGCGATaGTGCTGTCCGGAGGGGGCTTCCAGGCCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GSLVRFSPAAWR*CCPEGASRPFF
Trigger: GAAGAAGGGCCTGGAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CCCTTTGCCTCCTGGTTCCTTGGTGCGCTTCTCACCTaGAGCGTGGCGATGCTGCTGTCCGGAGGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: PFASWFLGALLT*SVAMLLSGGGF
Trigger: GAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TTCCAAAAGCCTCCAGCACAGGGCCAGCACCCAGGATaGTCCTCTCGACGCCGCTGGCGTAGCCCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: FQKPPAQGQHPG*SSRRRWRSPSG
Trigger: GCCAGAAGGGCTACGCCAGCGGCGTCGAGAGGACCATCCTGGGTGCTGGCCCTGTGCTGGAGGCTTTTGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GCCTCCTCCTCCAGCAGCACCTCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGGCTCTTGTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: ASSSSSTSSSSS*MSRVLGLLFRT
Trigger: GGTCCTGAACAAGAGCCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGAGGTGCTGCTGGAGGAGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
ENST00000598419.1
ENST00000682292.1
CDS CAA 72 bp ATGGCGTCCTTGATGACGTCCGAGGTGGTGCTGTCCTaGGTGGCAGTCACGCGGCACGAGGCCTGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: MASLMTSEVVLS*VAVTRHEAWLS
Trigger: CGAGAGCCAGGCCTCGTGCCGCGTGACTGCCACCAAGGACAGCACCACCTCGGACGTCATCAAGGACGCCAT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp CCGCACCACCTCCCGGTGCAGCGTCTCCTGCAGGGCTaGCCGCTCCGTCTCCTTCAGGAAGACCTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: PHHLPVQRLLQG*PLRLLQEDLGL
Trigger: AAGACCAAGGTCTTCCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp GGATTTAGAGTCGACCTGAGAGCCCGGGGACAGCCCTaGGTCTGGGAGGGAGGATGCGTCGCCTGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: GFRVDLRARGQP*VWEGGCVAWLL
Trigger: AAGAAGCCAGGCGACGCATCCTCCCTCCCAGACGCAGGGCTGTCCCCGGGCTCTCAGGTCGACTCTAAATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp TCCTTGGTGCGCTTCTCACCTGCAGCGTGGCGATGCTaGTGTCCGGAGGGGGCTTCCAGGCCCTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: SLVRFSPAAWRC*CPEGASRPFFM
Trigger: CATGAAGAAGGGCCTGGAAGCCCCCTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp TTGGTGCCGTCCAGCCGCAGGCTGGCAATGGCGTCCTaGATGACGTCCGAGGTGGTGCTGTCCTTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LVPSSRRLAMAS*MTSEVVLSLVA
Trigger: TGCCACCAAGGACAGCACCACCTCGGACGTCATCAAGGACGCCATTGCCAGCCTGCGGCTGGACGGCACCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp CAGGATTTTCCGCACCACCTCCCGGTGCAGCGTCTCCTGCAGGGCTaGCCGCTCCGTCTCCTTCAGGAAGACCTTGGTCTTCCCGATCTG +
Preference number: 6 (lower is better)
Translates to: QDFPHHLPVQRLLQG*PLRLLQEDLGLPDL
Trigger: CAGATCGGGAAGACCAAGGTCTTCCTGAAGGAGACGGAGCGGCAAGCCCTGCAGGAGACGCTGCACCGGGAGGTGGTGCGGAAAATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp CACCCGAGATCACGATGCACTGGTTCACGCGCTTCCTaGGCATGGTGTAGTAGGCCACGTCGGCCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: HPRSRCTGSRAS*AWCSRPRRPAR
Trigger: TCGCGCTGGCCGACGTGGCCTACTACACCATGCTCAGGAAGCGCGTGAACCAGTGCATCGTGATCTCGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp GAGGCAGGGTGCGAAGATAATGGCCAGCGCCCCAGGTaGCATGCGGTTGACATCCTCGAGCAGGGCCACCTT +
Preference number: 6 (lower is better)
Translates to: EAGCEDNGQRPR*HAVDILEQGHL
Trigger: AAGGTGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCCATTATCTTCGCACCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000597073.5
ENST00000682292.1
CDS CCA 72 bp GGAGCTGTCACTGCCCCGCAGCAGGGCCACGATGTCTaGCCGCATGTAGTCCATGTTCTTCTCCCGGAAGTC +
Preference number: 6 (lower is better)
Translates to: GAVTAPQQGHDV*PHVVHVLLPEV
Trigger: GACTTCCGGGAGAAGAACATGGACTACATGCGGCCAGACATCGTGGCCCTGCTGCGGGGCAGTGACAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GGTTGGCTTCTGGAAGGTGCTCCAGGACGGCATAGATaGCAGCCAGCTGCTCCTGCTTCTCCGGCAGCTCGA +
Preference number: 6 (lower is better)
Translates to: GWLLEGAPGRHR*QPAAPASPAAR
Trigger: TCGAGCTGCCGGAGAAGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGGAGCACCTTCCAGAAGCCAACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TCCGTGGTTTCTGCTGCAGGCTGCAAGACGGTGCAGTaGGGGGCTGCTAAGGAAAGGCTGGCAGTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SVVSAAGCKTVQ*GAAKERLAVLC
Trigger: GCACAGGACTGCCAGCCTTTCCTTAGCAGCCCCCCACTGCACCGTCTTGCAGCCTGCAGCAGAAACCACGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS CCA 72 bp GGTTGGCTTCTGGAAGGTGCTCCAGGACGGCATAGATaGCAGCCAGCTGCTCCTGCTTCTCCGGCAGCTAGC +
Preference number: 6 (lower is better)
Translates to: GWLLEGAPGRHR*QPAAPASPAAS
Trigger: GCTAGCTGCCGGAGAAGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGGAGCACCTTCCAGAAGCCAACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS TCA 72 bp GGTGAAATCCTGGAACGTGTACTTGGCGCTGTACCCTaGCCTCCGGATGCGCACGGTCTCCAGCATGCCGGT +
Preference number: 6 (lower is better)
Translates to: GEILERVLGAVP*PPDAHGLQHAG
Trigger: ACCGGCATGCTGGAGACCGTGCGCATCCGGAGGTCAGGGTACAGCGCCAAGTACACGTTCCAGGATTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp ATCTGCGTGGAGCCTCCGGGGCTGTCGGGCTTTTCCTaGACCCTTGGGCTGCCACATGGTTTGCTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ICVEPPGLSGFS*TLGLPHGLLLS
Trigger: GGACAAGAGCAAACCATGTGGCAGCCCAAGGGTTCAGGAAAAGCCCGACAGCCCCGGAGGCTCCACGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp ACTAGGCGCCGGGTGGCTGTGGCCTGCGCCACCAGCTaGATATGCACGTACTTGATGGTTCCATCTGCGTTG +
Preference number: 6 (lower is better)
Translates to: TRRRVAVACATS*ICTYLMVPSAL
Trigger: CAACGCAGATGGAACCATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGCCACAGCCACCCGGCGCCTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp TGTTTGTTCTGGAACTTGACGTGCTCCAGCCCTCTTTaGCGACGCGACTCACGCTTCTCCCGGCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: CLFWNLTCSSPL*RRDSRFSRLLG
Trigger: CCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GGTGTAGTAGGCCACGTCGGCCAGCGCGAAGACGTGTaGCTCCAGCTTGCCCAGCTGCTGGTTCTCATACAT +
Preference number: 6 (lower is better)
Translates to: GVVGHVGQREDV*LQLAQLLVLIH
Trigger: ATGTATGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGTCTTCGCGCTGGCCGACGTGGCCTACTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp CTCTTTGCCGACGCGACTCACGCTTCTCCCGGCTGCTaGGGACTTTCTCGTGACTTTCAGCCGCCACGGTTT +
Preference number: 6 (lower is better)
Translates to: LFADATHASPGC*GLSRDFQPPRF
Trigger: AAACCGTGGCGGCTGAAAGTCACGAGAAAGTCCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GGACAGCTGGCTTTTTCGCACTTCGCTCTCCGTCCGTaGTTTCTGCTGCAGGCTGCAAGACGGTGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: GQLAFSHFALRP*FLLQAARRCSG
Trigger: CCCACTGCACCGTCTTGCAGCCTGCAGCAGAAACCACGGACGGAGAGCGAAGTGCGAAAAAGCCAGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS CCA 72 bp GCCTCCTCCTCCAGCAGCACCTCCAGCTCCTCCTCCTaGATGTCCCGGGTCTTGGGGCTCTTGTTAGCATTT +
Preference number: 6 (lower is better)
Translates to: ASSSSSTSSSSS*MSRVLGLLLAF
Trigger: AAATGCTAACAAGAGCCCCAAGACCCGGGACATCCAGGAGGAGGAGCTGGAGGTGCTGCTGGAGGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595641.5
ENST00000596942.5
CDS CAA 72 bp GCTGTGGCCTGCGCCACCAGCTGCATATGCACGTACTaGATGGTTCCATCTGCGTTGCGCTCCTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: AVACATSCICTY*MVPSALRSCSR
Trigger: CCTGCTGCAGGAGCGCAACGCAGATGGAACCATCAAGTACGTGCATATGCAGCTGGTGGCGCAGGCCACAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp AGCACAATCCAGTCGAACAGGGCGCTGTACAGAGACTaGGCCATGGAGTCGCGGGCAGTGATGGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: STIQSNRALYRD*AMESRAVMASL
Trigger: CAGCGAGGCCATCACTGCCCGCGACTCCATGGCCAAGTCTCTGTACAGCGCCCTGTTCGACTGGATTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GTGTTTGTTCTGGAACTTGACGTGCTCCAGCCCTCTTaGCCGACGCGACTCACGCTTCTCCCGGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: VFVLELDVLQPS*PTRLTLLPAAG
Trigger: CCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GCGAAGATAATGGCCAGCGCCCCAGGTGACATGCGGTaGACATCCTCGAGCAGGGCCACCTTGACAAGGTGG +
Preference number: 6 (lower is better)
Translates to: AKIMASAPGDMR*TSSSRATLTRW
Trigger: CCACCTTGTCAAGGTGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCCATTATCTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000682292.1
CDS CAA 72 bp TTGAGGACGTCCTTCATGCTGGTCAGCGGGTCCGAGTaGTCAGGGCAGCGCAGGAGGCAGGGTGCGAAGATA +
Preference number: 6 (lower is better)
Translates to: LRTSFMLVSGSE*SGQRRRQGAKI
Trigger: TATCTTCGCACCCTGCCTCCTGCGCTGCCCTGACAACTCGGACCCGCTGACCAGCATGAAGGACGTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000597073.5
ENST00000682292.1
CDS GCA 72 bp GAGGCCATGGAGCATTTTGTCGCAGGAGCGAAAGCCTaGGGAAGGCGATACTCTCTGCAGCCTCCAGTTGGC +
Preference number: 6 (lower is better)
Translates to: EAMEHFVAGAKA*GRRYSLQPPVG
Trigger: GCCAACTGGAGGCTGCAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGCGACAAAATGCTCCATGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000597073.5
ENST00000598419.1
ENST00000682292.1
CDS GCA 72 bp GACGGGCCCATGCGCACATTGACACTGACACACACGTaGATGCTCCTGCCAATGTTCGCCTGCTCGGACTCT +
Preference number: 6 (lower is better)
Translates to: DGPMRTLTLTHT*MLLPMFACSDS
Trigger: AGAGTCCGAGCAGGCGAACATTGGCAGGAGCATGCACGTGTGTGTCAGTGTCAATGTGCGCATGGGCCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599420.5
ENST00000602158.1
CDS GCA 72 bp TGTGCTCCTGGACACGTGTCCACGCACACATACGCGTaGAGACGGGCCCATGCGCACATTGACACTGACACA +
Preference number: 6 (lower is better)
Translates to: CAPGHVSTHTYA*RRAHAHIDTDT
Trigger: TGTGTCAGTGTCAATGTGCGCATGGGCCCGTCTGCACGCGTATGTGTGCGTGGACACGTGTCCAGGAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602158.1
CDS CCA 72 bp TCCTCATGTTGCTGTTTGAACTTGGCCAGCAGGGTCTaGCTCGTGGCGTGGGGGAAGTTGCTCTCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SSCCCLNLASRV*LVAWGKLLSSS
Trigger: GGACGAGGAGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TCTGGGAGGGAGGATGCGTCGCCTGGCTTCTTCTTCTaGACAGCTGGCTTTTTCGCACTTCGCTCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: SGREDASPGFFF*TAGFFALRSPS
Trigger: GGACGGAGAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCCCTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GACTGGAAGAGGTTGAGGACCAGGTTGGTGTCCTTCTaGCCACGCTCAGTGGCCAGGTTGCTGACGACGATC +
Preference number: 6 (lower is better)
Translates to: DWKRLRTRLVSF*PRSVARLLTTI
Trigger: GATCGTCGTCAGCAACCTGGCCACTGAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTTCCAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS CCA 72 bp GGCAGCCCTCCCCAGCCACTGGTGGATGACGACCCATaGGATCTCAGGGGTGACTTATTCAAGACTACGGCT +
Preference number: 6 (lower is better)
Translates to: GSPPQPLVDDDP*DLRGDLFKTTA
Trigger: AGCCGTAGTCTTGAATAAGTCACCCCTGAGATCCCATGGGTCGTCATCCACCAGTGGCTGGGGAGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599420.5
CDS CAA 90 bp TGGCTCCATGACCGGGGTGCCCAGGAAGTACTTATTGTCCTCATGTaGCTGTTTGAACTTGGCCAGCAGGGTCTGGCTCGTGGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: WLHDRGAQEVLIVLM*LFELGQQGLARGVG
Trigger: CCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCCGGTCATGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp GGACTGGATGTGTTTGTTCTGGAACTTGACGTGCTCCAGCCCTCTTaGCCGACGCGACTCACGCTTCTCCCGGCTGCTGGGGACTTTCTC +
Preference number: 6 (lower is better)
Translates to: GLDVFVLELDVLQPS*PTRLTLLPAAGDFL
Trigger: GAGAAAGTCCCCAGCAGCCGGGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp CGGGTGAACTCATCTAGCAGTGACTGGAAGAGGTTGAGGACCAGGTaGGTGTCCTTCTGGCCACGCTCAGTGGCCAGGTTGCTGACGACG +
Preference number: 6 (lower is better)
Translates to: RVNSSSSDWKRLRTR*VSFWPRSVARLLTT
Trigger: CGTCGTCAGCAACCTGGCCACTGAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTTCCAGTCACTGCTAGATGAGTTCACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS CAA 90 bp AGGCAGGGTGCGAAGATAATGGCCAGCGCCCCAGGTGACATGCGGTaGACATCCTCGAGCAGGGCCACCTTGACAAGGTGGAAGATGAGT +
Preference number: 6 (lower is better)
Translates to: RQGAKIMASAPGDMR*TSSSRATLTRWKMS
Trigger: ACTCATCTTCCACCTTGTCAAGGTGGCCCTGCTCGAGGATGTCAACCGCATGTCACCTGGGGCGCTGGCCATTATCTTCGCACCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000682292.1
CDS CAA 90 bp GGGGTTGATGGCCACCAGGATGCTCCCCGCGTACGTGTAGATCTTTaGTTGCAGGAAGCGGTGCTTGAGGTTCTTCAGGAGGTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: GVDGHQDAPRVRVDL*LQEAVLEVLQEVAL
Trigger: GAGGGCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCAACAAAAGATCTACACGTACGCGGGGAGCATCCTGGTGGCCATCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp GGGGTGCCCAGGAAGTACTTATTGTCCTCATGTTGCTGTTTGAACTaGGCCAGCAGGGTCTGGCTCGTGGCGTGGGGGAAGTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: GVPRKYLLSSCCCLN*ASRVWLVAWGKLLS
Trigger: GGAGAGCAACTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp AGGGCACTCTCCTCCTTGCAGGACTGGATGTGTTTGTTCTGGAACTaGACGTGCTCCAGCCCTCTTTGCCGACGCGACTCACGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RALSSLQDWMCLFWN*TCSSPLCRRDSRFS
Trigger: GGAGAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp TGGCGTCCAGCACCCATTCCTCGCCTCCCGACTCTTTaGCCTCCACCAGCACATAACATTTGGTGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: WRPAPIPRLPTL*PPPAHNIWCRP
Trigger: TGGACGGCACCAAATGTTATGTGCTGGTGGAGGTCAAAGAGTCGGGAGGCGAGGAATGGGTGCTGGACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp GCCAGCGCGAAGACGTGTGGCTCCAGCTTGCCCAGCTaGTGGTTCTCATACATCTTCACGTACTTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: ASAKTCGSSLPS*WFSYIFTYLGL
Trigger: CAACCCCAAGTACGTGAAGATGTATGAGAACCAGCAGCTGGGCAAGCTGGAGCCACACGTCTTCGCGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CTGAGGGACTGGAGAAGGCTACGGGGGTCCTCGCCCTaGCAGGGCAATCCTTTGATGCTCTTGATCATTTGG +
Preference number: 6 (lower is better)
Translates to: LRDWRRLRGSSP*QGNPLMLLIIW
Trigger: CCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGGCGAGGACCCCCGTAGCCTTCTCCAGTCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000601749.1
ENST00000682292.1
CDS GCA 72 bp CCTGCCAATGTTCGCCTGCTCGGACTCTCATCTATGTaGAGCCTACTCACAGCACGCTCCTGCTTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: PANVRLLGLSSM*SLLTARSCFRF
Trigger: GAAGCGGAAGCAGGAGCGTGCTGTGAGTAGGCTGCACATAGATGAGAGTCCGAGCAGGCGAACATTGGCAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599420.5
CDS CCA 72 bp GGAGGATGCGTCGCCTGGCTTCTTCTTCTGGACAGCTaGCTTTTTCGCACTTCGCTCTCCGTCCGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: GGCVAWLLLLDS*LFRTSLSVRGF
Trigger: GAAACCACGGACGGAGAGCGAAGTGCGAAAAAGCCAGCTGTCCAGAAGAAGAAGCCAGGCGACGCATCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp ACTCTCTTTCCAAGAGGCAGTTGCATCCTGACCAGTTaGCTTCGCAGTACCTCCAGCACAGGGCCAGCACCC +
Preference number: 6 (lower is better)
Translates to: TLFPRGSCILTS*LRSTSSTGPAP
Trigger: GGGTGCTGGCCCTGTGCTGGAGGTACTGCGAAGCCAACTGGTCAGGATGCAACTGCCTCTTGGAAAGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS CCA 72 bp CCTCAGCCTCCTGATGAGTCCCAGTGCTTCCCCCTGTaGCCTTCCATGGCATTGCATCCTCTTCTTTCGGGA +
Preference number: 6 (lower is better)
Translates to: PQPPDESQCFPL*PSMALHPLLSG
Trigger: TCCCGAAAGAAGAGGATGCAATGCCATGGAAGGCCACAGGGGGAAGCACTGGGACTCATCAGGAGGCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS CAA 72 bp ACACTATTGATGTGGGCCCAGTGGAATGAGGTGGGTTaGCACCTTGCACACAGCGCTGGTTCCGGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: TLLMWAQWNEVG*HLAHSAGSGRA
Trigger: AGCCCTCCCGGAACCAGCGCTGTGTGCAAGGTGCAAACCCACCTCATTCCACTGGGCCCACATCAATAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601490.1
CDS CAA 90 bp GTTGATGGCCACCAGGATGCTCCCCGCGTACGTGTAGATCTTTTGTaGCAGGAAGCGGTGCTTGAGGTTCTTCAGGAGGTTGCCCTCGGT +
Preference number: 6 (lower is better)
Translates to: VDGHQDAPRVRVDLL*QEAVLEVLQEVALG
Trigger: ACCGAGGGCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCAACAAAAGATCTACACGTACGCGGGGAGCATCCTGGTGGCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp CACGAGACTGCCTCTTCCACGTCCTTCTTGTTGAGGAGTGCGTGGTaGATCCGCAGCACAATCCAGTCGAACAGGGCGCTGTACAGAGAC +
Preference number: 6 (lower is better)
Translates to: HETASSTSFLLRSAW*IRSTIQSNRALYRD
Trigger: GTCTCTGTACAGCGCCCTGTTCGACTGGATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp ACCCCAATGGACAGGCACGAGACTGCCTCTTCCACGTCCTTCTTGTaGAGGAGTGCGTGGTTGATCCGCAGCACAATCCAGTCGAACAGG +
Preference number: 6 (lower is better)
Translates to: TPMDRHETASSTSFL*RSAWLIRSTIQSNR
Trigger: CCTGTTCGACTGGATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCCATTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp AGGACCCCAATGGACAGGCACGAGACTGCCTCTTCCACGTCCTTCTaGTTGAGGAGTGCGTGGTTGATCCGCAGCACAATCCAGTCGAAC +
Preference number: 6 (lower is better)
Translates to: RTPMDRHETASSTSF*LRSAWLIRSTIQSN
Trigger: GTTCGACTGGATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCCATTGGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp ATGACCGGGGTGCCCAGGAAGTACTTATTGTCCTCATGTTGCTGTTaGAACTTGGCCAGCAGGGTCTGGCTCGTGGCGTGGGGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: MTGVPRKYLLSSCCC*NLASRVWLVAWGKL
Trigger: CAACTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCCGGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp AGGGATGTCTGGAACTGGGCGCTGATGCTTGGTGGCTTTTTCTTCTaGTGCAGGTGCAGTAGGGACTTGGTGGTGCGGTCGTGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: RDVWNWALMLGGFFF*CRCSRDLVVRSCRV
Trigger: GACTCTGCACGACCGCACCACCAAGTCCCTACTGCACCTGCACAAGAAGAAAAAGCCACCAAGCATCAGCGCCCAGTTCCAGACATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000601490.1
ENST00000601749.1
ENST00000602177.1
ENST00000682292.1
CDS CAA 90 bp GAAGGTTCTCTGAGGGCACTCTCCTCCTTGCAGGACTGGATGTGTTaGTTCTGGAACTTGACGTGCTCCAGCCCTCTTTGCCGACGCGAC +
Preference number: 6 (lower is better)
Translates to: EGSLRALSSLQDWMC*FWNLTCSSPLCRRD
Trigger: GTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAGAGAACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp CCAATCTTGACATTTCGGTTCTTCTTCCCTTTGCCTCCTGGTTCCTaGGTGCGCTTCTCACCTGCAGCGTGGCGATGCTGCTGTCCGGAG +
Preference number: 6 (lower is better)
Translates to: PILTFRFFFPLPPGS*VRFSPAAWRCCCPE
Trigger: CTCCGGACAGCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAACCGAAATGTCAAGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp GACTGGAGAAGGCTACGGGGGTCCTCGCCCTGCCAGGGCAATCCTTaGATGCTCTTGATCATTTGGTTATGCAAATCGCTGAGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: DWRRLRGSSPCQGNP*MLLIIWLCKSLRGG
Trigger: CCCTCCCCTCAGCGATTTGCATAACCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGGCGAGGACCCCCGTAGCCTTCTCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601749.1
CDS CAA 90 bp GCATTGAGCAGCGGTAAAGTTTTTCCGAAGGGGTGCTGGCTCCTCTaGGCAGCTCTTCTGGGTGACTTTGGGCACCAGGGCTGCTCATAC +
Preference number: 6 (lower is better)
Translates to: ALSSGKVFPKGCWLL*AALLGDFGHQGCSY
Trigger: GTATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAACTTTACCGCTGCTCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602177.1
CDS TCA 72 bp CCTCCTTGCAGGACTGGATGTGTTTGTTCTGGAACTTaGCGTGCTCCAGCCCTCTTTGCCGACGCGACTCAC +
Preference number: 6 (lower is better)
Translates to: PPCRTGCVCSGT*RAPALFADATH
Trigger: GTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp AGAAAAAGCCTCTTAAACGTGGATTTAGAGTCGACCTaGGAGCCCGGGGACAGCCCTGCGTCTGGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RKSLLNVDLEST*EPGDSPASGRE
Trigger: CTCCCTCCCAGACGCAGGGCTGTCCCCGGGCTCTCAGGTCGACTCTAAATCCACGTTTAAGAGGCTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GCACTCTCCTCCTTGCAGGACTGGATGTGTTTGTTCTaGAACTTGACGTGCTCCAGCCCTCTTTGCCGACGC +
Preference number: 6 (lower is better)
Translates to: ALSSLQDWMCLF*NLTCSSPLCRR
Trigger: GCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp ACAGAGGGCAGGTGGGGAGGCACTTGCTTGACAAGGTaGAAGATGAGTCTCTCCAGGGAGTTGTGGTTGGCT +
Preference number: 6 (lower is better)
Translates to: TEGRWGGTCLTR*KMSLSRELWLA
Trigger: AGCCAACCACAACTCCCTGGAGAGACTCATCTTCCACCTTGTCAAGCAAGTGCCTCCCCACCTGCCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS CAA 72 bp TGTTGCAGGAAGCGGTGCTTGAGGTTCTTCAGGAGGTaGCCCTCGGTTAGCTCGGGGAGGTTACACAGGTCA +
Preference number: 6 (lower is better)
Translates to: CCRKRCLRFFRR*PSVSSGRLHRS
Trigger: TGACCTGTGTAACCTCCCCGAGCTAACCGAGGGCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GGCCACCAGGATGCTCCCCGCGTACGTGTAGATCTTTaGTTGCAGGAAGCGGTGCTTGAGGTTCTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: GHQDAPRVRVDL*LQEAVLEVLQE
Trigger: CTCCTGAAGAACCTCAAGCACCGCTTCCTGCAACAAAAGATCTACACGTACGCGGGGAGCATCCTGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GACAGGCACGAGACTGCCTCTTCCACGTCCTTCTTGTaGAGGAGTGCGTGGTTGATCCGCAGCACAATCCAG +
Preference number: 6 (lower is better)
Translates to: DRHETASSTSFL*RSAWLIRSTIQ
Trigger: CTGGATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp TGGAACTGGGCGCTGATGCTTGGTGGCTTTTTCTTCTaGTGCAGGTGCAGTAGGGACTTGGTGGTGCGGTCG +
Preference number: 6 (lower is better)
Translates to: WNWALMLGGFFF*CRCSRDLVVRS
Trigger: CGACCGCACCACCAAGTCCCTACTGCACCTGCACAAGAAGAAAAAGCCACCAAGCATCAGCGCCCAGTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000601490.1
ENST00000601749.1
ENST00000602177.1
ENST00000682292.1
CDS CAA 72 bp ACATTTCGGTTCTTCTTCCCTTTGCCTCCTGGTTCCTaGGTGCGCTTCTCACCTGCAGCGTGGCGATGCTGC +
Preference number: 6 (lower is better)
Translates to: TFRFFFPLPPGS*VRFSPAAWRCC
Trigger: GCAGCATCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAACCGAAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp CCACGGGTGAACTCATCTAGCAGTGACTGGAAGAGGTaGAGGACCAGGTTGGTGTCCTTCTGGCCACGCTCA +
Preference number: 6 (lower is better)
Translates to: PRVNSSSSDWKR*RTRLVSFWPRS
Trigger: TGAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTTCCAGTCACTGCTAGATGAGTTCACCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS CAA 72 bp AACTCTCTTTCCAAGAGGCAGTTGCATCCTGACCAGTaGGCTTCGCAGTACCTCCAGCACAGGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: NSLSKRQLHPDQ*ASQYLQHRAST
Trigger: GGTGCTGGCCCTGTGCTGGAGGTACTGCGAAGCCAACTGGTCAGGATGCAACTGCCTCTTGGAAAGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS CAA 90 bp TCCTGGGTGACCCTTCTGGAAGGTTCTCTGAGGGCACTCTCCTCCTaGCAGGACTGGATGTGTTTGTTCTGGAACTTGACGTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SWVTLLEGSLRALSS*QDWMCLFWNLTCSS
Trigger: GCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAGAGAACCTTCCAGAAGGGTCACCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp TGGTGTCCTTCTGGCCACGCTCAGTGGCCAGGTTGCTaGCGACGATCTGGTAGTTCTCCATCAGATCCTTGT +
Preference number: 6 (lower is better)
Translates to: WCPSGHAQWPGC*RRSGSSPSDPC
Trigger: ACAAGGATCTGATGGAGAACTACCAGATCGTCGTCAGCAACCTGGCCACTGAGCGTGGCCAGAAGGACACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS TCA 72 bp TCCTGGACAGCACGCTCCTGCTTCCGCTTCTTCTTCTaGGCTTTGCTCTGCTTCACTGGCTCGAAGTCGTTC +
Preference number: 6 (lower is better)
Translates to: SWTARSCFRFFF*ALLCFTGSKSF
Trigger: GAACGACTTCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAAGCAGGAGCGTGCTGTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp CGGCAGCTAGCACGCTCCTGCTTCCGCTTCTTCTTCTaGGCTTTGCTCTTCACTGGCTCGAAGTCGTTCTTG +
Preference number: 6 (lower is better)
Translates to: RQLARSCFRFFF*ALLFTGSKSFL
Trigger: CAAGAACGACTTCGAGCCAGTGAAGAGCAAAGCTCAGAAGAAGAAGCGGAAGCAGGAGCGTGCTAGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS TCA 72 bp TCTCAGGACCACACTATTGATGTGGGCCCAGTGGAATaGGGTGGGTTTGCACCTTGCACACAGCGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: SQDHTIDVGPVE*GGFAPCTQRWF
Trigger: GAACCAGCGCTGTGTGCAAGGTGCAAACCCACCTCATTCCACTGGGCCCACATCAATAGTGTGGTCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601490.1
CDS GCA 72 bp TTGCAGGACTGGATGTGTTTGTTCTGGAACTTGACGTaGTCCAGCCCTCTTTGCCGACGCGACTCACGCTTC +
Preference number: 6 (lower is better)
Translates to: LQDWMCLFWNLT*SSPLCRRDSRF
Trigger: GAAGCGTGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CAGCGTCTTCTCAGTTTCTTCAGAGACCTTGCCAACTaGCATGGCCTGGGGTTGCTCTGTGGGCTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: QRLLSFFRDLAN*HGLGLLCGLLL
Trigger: CAAAAGCAGCCCACAGAGCAACCCCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAACTGAGAAGACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CTGACACACACGTGCATGCTCCTGCCAATGTTCGCCTaGTCGGACTCTCATCTATGTGCAGCCTACTCACAG +
Preference number: 6 (lower is better)
Translates to: LTHTCMLLPMFA*SDSHLCAAYSQ
Trigger: CTGTGAGTAGGCTGCACATAGATGAGAGTCCGAGCAGGCGAACATTGGCAGGAGCATGCACGTGTGTGTCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599420.5
ENST00000602158.1
CDS CCA 72 bp CCCTGCCAGGGCAATCCTTTGATGCTCTTGATCATTTaGTTATGCAAATCGCTGAGGGGAGGGGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PCQGNPLMLLII*LCKSLRGGVEG
Trigger: CCCCTCCACCCCTCCCCTCAGCGATTTGCATAACCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601749.1
CDS CAA 72 bp ATGGACAGGCACGAGACTGCCTCTTCCACGTCCTTCTaGTTGAGGAGTGCGTGGTTGATCCGCAGCACAATC +
Preference number: 6 (lower is better)
Translates to: MDRHETASSTSF*LRSAWLIRSTI
Trigger: GATTGTGCTGCGGATCAACCACGCACTCCTCAACAAGAAGGACGTGGAAGAGGCAGTCTCGTGCCTGTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GTGCCCAGGAAGTACTTATTGTCCTCATGTTGCTGTTaGAACTTGGCCAGCAGGGTCTGGCTCGTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: VPRKYLLSSCCC*NLASRVWLVAW
Trigger: CCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GACCGGGGTGCCCAGGAAGTACTTATTGTCCTCATGTaGCTGTTTGAACTTGGCCAGCAGGGTCTGGCTCGT +
Preference number: 6 (lower is better)
Translates to: DRGAQEVLIVLM*LFELGQQGLAR
Trigger: ACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp TCCTCCTTGCAGGACTGGATGTGTTTGTTCTGGAACTaGACGTGCTCCAGCCCTCTTTGCCGACGCGACTCA +
Preference number: 6 (lower is better)
Translates to: SSLQDWMCLFWN*TCSSPLCRRDS
Trigger: TGAGTCGCGTCGGCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp CTGAGGGCACTCTCCTCCTTGCAGGACTGGATGTGTTaGTTCTGGAACTTGACGTGCTCCAGCCCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: LRALSSLQDWMC*FWNLTCSSPLC
Trigger: GCAAAGAGGGCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp ACCTTGACAAGGTGGAAGATGAGTCTCTCCAGGGAGTaGTGGTTGGCTTCTGGAAGGTGCTCCAGGACGGCA +
Preference number: 6 (lower is better)
Translates to: TLTRWKMSLSRE*WLASGRCSRTA
Trigger: TGCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACTCATCTTCCACCTTGTCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000596942.5
ENST00000682292.1
CDS CAA 72 bp TGCTTGACAAGGTGGAAGATGAGTCTCTCCAGGGAGTaGTGGTTGGCTTCTGGAAGGTGCTCCAGGACGGCA +
Preference number: 6 (lower is better)
Translates to: CLTRWKMSLSRE*WLASGRCSRTA
Trigger: TGCCGTCCTGGAGCACCTTCCAGAAGCCAACCACAACTCCCTGGAGAGACTCATCTTCCACCTTGTCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593533.1
CDS CAA 72 bp GCCCTGCCAGGGCAATCCTTTGATGCTCTTGATCATTaGGTTATGCAAATCGCTGAGGGGAGGGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: ALPGQSFDALDH*VMQIAEGRGGG
Trigger: CCCTCCACCCCTCCCCTCAGCGATTTGCATAACCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601749.1
CDS CAA 72 bp GGGTCCTCGCCCTGCCAGGGCAATCCTTTGATGCTCTaGATCATTTGGTTATGCAAATCGCTGAGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GSSPCQGNPLML*IIWLCKSLRGG
Trigger: CCCTCCCCTCAGCGATTTGCATAACCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGGCGAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601749.1
CDS CAA 90 bp TATGCAAATCGCGGTAAAGTTTTTCCGAAGGGGTGCTGGCTCCTCTaGGCAGCTCTTCTGGGTGACTTTGGGCACCAGGGCTGCTCATAC +
Preference number: 6 (lower is better)
Translates to: YANRGKVFPKGCWLL*AALLGDFGHQGCSY
Trigger: GTATGAGCAGCCCTGGTGCCCAAAGTCACCCAGAAGAGCTGCCAAGAGGAGCCAGCACCCCTTCGGAAAAACTTTACCGCGATTTGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000682292.1
CDS TCA 72 bp CGTACGTGTAGATCTTTTGTTGCAGGAAGCGGTGCTTaGGGTTCTTCAGGAGGTTGCCCTCGGTTAGCTCGG +
Preference number: 6 (lower is better)
Translates to: RTCRSFVAGSGA*GSSGGCPRLAR
Trigger: CCGAGCTAACCGAGGGCAACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCAACAAAAGATCTACACGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS TCA 72 bp CTACTCACAGCACGCTCCTGCTTCCGCTTCTTCTTCTaGGCTTTGCTCTGCTTCACTGGCTCGAAGTCGTTC +
Preference number: 6 (lower is better)
Translates to: LLTARSCFRFFF*ALLCFTGSKSF
Trigger: GAACGACTTCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAAGCAGGAGCGTGCTGTGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599420.5
CDS GCA 72 bp CACCAGCTGCATATGCACGTACTTGATGGTTCCATCTaGGTTGCGCTCCTGCAGCAGGAAGTAGTAGCCATC +
Preference number: 6 (lower is better)
Translates to: HQLHMHVLDGSI*VALLQQEVVAI
Trigger: GATGGCTACTACTTCCTGCTGCAGGAGCGCAACGCAGATGGAACCATCAAGTACGTGCATATGCAGCTGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp TTGTGCAGGTGCAGTAGGGACTTGGTGGTGCGGTCGTaGAGAGTCATGCTGATGATGAGTTTCAGGGACTTG +
Preference number: 6 (lower is better)
Translates to: LCRCSRDLVVRS*RVMLMMSFRDL
Trigger: CAAGTCCCTGAAACTCATCATCAGCATGACTCTGCACGACCGCACCACCAAGTCCCTACTGCACCTGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598464.1
ENST00000601490.1
ENST00000601749.1
ENST00000602177.1
ENST00000682292.1
CDS GCA 72 bp CAGCACGCTCCTGCTTCCGCTTCTTCTTCTGAGCTTTaGTCTGCTTCACTGGCTCGAAGTCGTTCTTGGTGT +
Preference number: 6 (lower is better)
Translates to: QHAPASASSSEL*SASLARSRSWC
Trigger: ACACCAAGAACGACTTCGAGCCAGTGAAGCAGAGCAAAGCTCAGAAGAAGAAGCGGAAGCAGGAGCGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000599420.5
ENST00000682292.1
CDS CCA 72 bp GAAGGTTCTCTGAGGGCACTCTCCTCCTTGCAGGACTaGATGTGTTTGTTCTGGAACTTGACGTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: EGSLRALSSLQD*MCLFWNLTCSS
Trigger: GCTGGAGCACGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAGAGAACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp AATCTTGACATTTCGGTTCTTCTTCCCTTTGCCTCCTaGTTCCTTGGTGCGCTTCTCACCTGCAGCGTGGCG +
Preference number: 6 (lower is better)
Translates to: NLDISVLLPFAS*FLGALLTCSVA
Trigger: CGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAACCGAAATGTCAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TCTCTAGGAATCCCATGGGACAGAGTGGTGGTCATGTaGCCGATTAGTCGTCCTGAGCACAGAAGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: SLGIPWDRVVVM*PISRPEHRRSA
Trigger: TGCTGACCTTCTGTGCTCAGGACGACTAATCGGCCACATGACCACCACTCTGTCCCATGGGATTCCTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597572.1
CDS CCA 72 bp TTTGGTCTCAGGACCACACTATTGATGTGGGCCCAGTaGAATGAGGTGGGTTTGCACCTTGCACACAGCGCT +
Preference number: 6 (lower is better)
Translates to: FGLRTTLLMWAQ*NEVGLHLAHSA
Trigger: AGCGCTGTGTGCAAGGTGCAAACCCACCTCATTCCACTGGGCCCACATCAATAGTGTGGTCCTGAGACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601490.1
CDS CAA 72 bp CACCAGGATGCTCCCCGCGTACGTGTAGATCTTTTGTaGCAGGAAGCGGTGCTTGAGGTTCTTCAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: HQDAPRVRVDLL*QEAVLEVLQEV
Trigger: AACCTCCTGAAGAACCTCAAGCACCGCTTCCTGCAACAAAAGATCTACACGTACGCGGGGAGCATCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593411.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp AGGAAGTACTTATTGTCCTCATGTTGCTGTTTGAACTaGGCCAGCAGGGTCTGGCTCGTGGCGTGGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RKYLLSSCCCLN*ASRVWLVAWGK
Trigger: CTTCCCCCACGCCACGAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp ATGATGAAAGCTGGCTCCATGACCGGGGTGCCCAGGAAGTACTTATaGTCCTCATGTTGCTGTTTGAACTTGGCCAGCAGGGTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: MMKAGSMTGVPRKYL*SSCCCLNLASRVWL
Trigger: GAGCCAGACCCTGCTGGCCAAGTTCAAACAGCAACATGAGGACAATAAGTACTTCCTGGGCACCCCGGTCATGGAGCCAGCTTTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp GACACTGTGATCTTCCCAATCTTGACATTTCGGTTCTTCTTCCCTTaGCCTCCTGGTTCCTTGGTGCGCTTCTCACCTGCAGCGTGGCGA +
Preference number: 6 (lower is better)
Translates to: DTVIFPILTFRFFFP*PPGSLVRFSPAAWR
Trigger: TCGCCACGCTGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAACCGAAATGTCAAGATTGGGAAGATCACAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp GAACGGAGGTCATTTATCTTGTTGAGCAGGAACTCGTCCAGGTACTaGAGCTCATTGGCGTTGGTGATCTGGCGGAACACCGATTCCCGC +
Preference number: 6 (lower is better)
Translates to: ERRSFILLSRNSSRY*SSLALVIWRNTDSR
Trigger: GCGGGAATCGGTGTTCCGCCAGATCACCAACGCCAATGAGCTCAAGTACCTGGACGAGTTCCTGCTCAACAAGATAAATGACCTCCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp CAGTTCCTAGAGATGGTTTGGGACTTGCCTTCCATATaGAAACCAACCAGTCCAGAGCCTACACCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: QFLEMVWDLPSI*KPTSPEPTPQP
Trigger: TGGCTGGGGTGTAGGCTCTGGACTGGTTGGTTTGCATATGGAAGGCAAGTCCCAAACCATCTCTAGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS CCA 72 bp TTTCACCTTCCCTGCGAAGTGCTGGATGATGAAAGCTaGCTCCATGACCGGGGTGCCCAGGAAGTACTTATT +
Preference number: 6 (lower is better)
Translates to: FHLPCEVLDDES*LHDRGAQEVLI
Trigger: AATAAGTACTTCCTGGGCACCCCGGTCATGGAGCCAGCTTTCATCATCCAGCACTTCGCAGGGAAGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000594971.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TCTTCTCAGTTTCTTCAGAGACCTTGCCAACTGCCATaGCCTGGGGTTGCTCTGTGGGCTGCTTTTGAGATG +
Preference number: 6 (lower is better)
Translates to: SSQFLQRPCQLP*PGVALWAAFEM
Trigger: CATCTCAAAAGCAGCCCACAGAGCAACCCCAGGCCATGGCAGTTGGCAAGGTCTCTGAAGAAACTGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TGCTGGGCTCTTAGTGAGACTTCTCTAGGAATCCCATaGGACAGAGTGGTGGTCATGTGGCCGATTAGTCGT +
Preference number: 6 (lower is better)
Translates to: CWALSETSLGIP*DRVVVMWPISR
Trigger: ACGACTAATCGGCCACATGACCACCACTCTGTCCCATGGGATTCCTAGAGAAGTCTCACTAAGAGCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597572.1
CDS CAA 72 bp ACCCTTCTGGAAGGTTCTCTGAGGGCACTCTCCTCCTaGCAGGACTGGATGTGTTTGTTCTGGAACTTGACG +
Preference number: 6 (lower is better)
Translates to: TLLEGSLRALSS*QDWMCLFWNLT
Trigger: CGTCAAGTTCCAGAACAAACACATCCAGTCCTGCAAGGAGGAGAGTGCCCTCAGAGAACCTTCCAGAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 90 bp CCCACGTGGATCTTCCCGTTCGGGACAGAGTACATCGTTTTGATGTaGCTCCTGAACTTCTCGGTGGCTTCGATAAACAAGCTCTCAATG +
Preference number: 6 (lower is better)
Translates to: PTWIFPFGTEYIVLM*LLNFSVASINKLSM
Trigger: CATTGAGAGCTTGTTTATCGAAGCCACCGAGAAGTTCAGGAGCAACATCAAAACGATGTACTCTGTCCCGAACGGGAAGATCCACGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp TGGTTTTGTGAACAAAAGGAACACAGTGTCGGGATTTaGGTTAGTTCAGCAAGCCACGCCTGGCGGGTTAGA +
Preference number: 6 (lower is better)
Translates to: WFCEQKEHSVGI*VSSASHAWRVR
Trigger: TCTAACCCGCCAGGCGTGGCTTGCTGAACTAACCCAAATCCCGACACTGTGTTCCTTTTGTTCACAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598464.1
CDS CAA 72 bp ATCTTCCCAATCTTGACATTTCGGTTCTTCTTCCCTTaGCCTCCTGGTTCCTTGGTGCGCTTCTCACCTGCA +
Preference number: 6 (lower is better)
Translates to: IFPILTFRFFFP*PPGSLVRFSPA
Trigger: TGCAGGTGAGAAGCGCACCAAGGAACCAGGAGGCAAAGGGAAGAAGAACCGAAATGTCAAGATTGGGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp TCATTTATCTTGTTGAGCAGGAACTCGTCCAGGTACTaGAGCTCATTGGCGTTGGTGATCTGGCGGAACACC +
Preference number: 6 (lower is better)
Translates to: SFILLSRNSSRY*SSLALVIWRNT
Trigger: GGTGTTCCGCCAGATCACCAACGCCAATGAGCTCAAGTACCTGGACGAGTTCCTGCTCAACAAGATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp ACGTGGATCTTCCCGTTCGGGACAGAGTACATCGTTTaGATGTTGCTCCTGAACTTCTCGGTGGCTTCGATA +
Preference number: 6 (lower is better)
Translates to: TWIFPFGTEYIV*MLLLNFSVASI
Trigger: TATCGAAGCCACCGAGAAGTTCAGGAGCAACATCAAAACGATGTACTCTGTCCCGAACGGGAAGATCCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS GCA 72 bp ACCATCTCCATGGCCTGCTTGAGCCTCTCAAAGTCATaGTTCAGGTCCTCCCCATCTTCAATCTTCAAGTTA +
Preference number: 6 (lower is better)
Translates to: TISMACLSLSKS*FRSSPSSIFKL
Trigger: TAACTTGAAGATTGAAGATGGGGAGGACCTGAAGCATGACTTTGAGAGGCTCAAGCAGGCCATGGAGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp GTGGCTTCGATAAACAAGCTCTCAATGGGCGTCTTCTaGGAACGGAGGTCATTTATCTTGTTGAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: VASINKLSMGVF*ERRSFILLSRN
Trigger: GTTCCTGCTCAACAAGATAAATGACCTCCGTTCCCAGAAGACGCCCATTGAGAGCTTGTTTATCGAAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000593533.1
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CCA 72 bp CCTGGAGCGGGGCAGGGCTTTGAGGCAAATTGGACTTaGCAACACAGATCATTGATCCTTTTCAATACATCA +
Preference number: 6 (lower is better)
Translates to: PGAGQGFEANWT*QHRSLILFNTS
Trigger: TGATGTATTGAAAAGGATCAATGATCTGTGTTGCCAAGTCCAATTTGCCTCAAAGCCCTGCCCCGCTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601749.1
CDS CAA 72 bp AGGATAAGCTTGTCGTTGACGGTCACCGTTTTTCTTTaGGTCAGAACCTCCACCAAGATTTCTCGCTTCACC +
Preference number: 6 (lower is better)
Translates to: RISLSLTVTVFL*VRTSTKISRFT
Trigger: GGTGAAGCGAGAAATCTTGGTGGAGGTTCTGACCAAAAGAAAAACGGTGACCGTCAACGACAAGCTTATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000682292.1
CDS CAA 72 bp GCCCTGCCAGGGCAATCCTTTGATGCTCTTGATCATTaGGTTATGCAAATCGCGGTAAAGTTTTTCCGAAGG +
Preference number: 6 (lower is better)
Translates to: ALPGQSFDALDH*VMQIAVKFFRR
Trigger: CCTTCGGAAAAACTTTACCGCGATTTGCATAACCAAATGATCAAGAGCATCAAAGGATTGCCCTGGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598101.1
ENST00000682292.1
CDS CAA 72 bp ATTGATTCTAGCCAGTTCCTAGAGATGGTTTGGGACTaGCCTTCCATATGCAAACCAACCAGTCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: IDSSQFLEMVWD*PSICKPTSPEP
Trigger: AGGCTCTGGACTGGTTGGTTTGCATATGGAAGGCAAGTCCCAAACCATCTCTAGGAACTGGCTAGAATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS TCA 72 bp CTTCCATGGCATTGCATCCTCTTCTTTCGGGAACTGTaGGTAACAAACTCTCTTTCCAAGAGGCAGTTGCAT +
Preference number: 6 (lower is better)
Translates to: LPWHCILFFREL*VTNSLSKRQLH
Trigger: ATGCAACTGCCTCTTGGAAAGAGAGTTTGTTACTCACAGTTCCCGAAAGAAGAGGATGCAATGCCATGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593411.1
CDS CAA 72 bp TCGTGCAGAGTCATGCTGATGATGAGTTTCAGGGACTaGGAGTCCAGTAGGTTCTTTGGAATGATCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SCRVMLMMSFRD*ESSRFFGMICF
Trigger: AAAGCAGATCATTCCAAAGAACCTACTGGACTCCAAGTCCCTGAAACTCATCATCAGCATGACTCTGCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397274.6
ENST00000594824.5
ENST00000595618.5
ENST00000595641.5
ENST00000598464.1
ENST00000601749.1
ENST00000602177.1
ENST00000682292.1
CDS TCA 72 bp CCAATCCTAAGCCAGCTTACTCTGCCTAGCACATTCTaGTGCATGAAAATCACAATAAAGTTTCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: PILSQLTLPSTF*CMKITIKFPAS
Trigger: AGAGGCAGGAAACTTTATTGTGATTTTCATGCATCAGAATGTGCTAGGCAGAGTAAGCTGGCTTAGGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593411.1