RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO9A (Homo sapiens)

Ensembl gene IDs: ENSG00000066933

Ensembl transcript IDs: ENST00000356056.10, ENST00000424560.2, ENST00000444904.5, ENST00000561618.5, ENST00000563542.5, ENST00000563648.1, ENST00000563925.1, ENST00000564571.5, ENST00000564699.1, ENST00000564931.1, ENST00000565528.1, ENST00000566744.5, ENST00000566885.5, ENST00000567095.1, ENST00000567560.5, ENST00000568042.5, ENST00000568438.1, ENST00000568481.1, ENST00000568781.1, ENST00000569314.1

Found 1365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGGAATGTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATaGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATC +
Preference number: 1 (lower is better)
Translates to: AGNVCCEKSALHFGV*APNVELPHCCHAEI
Trigger: GATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACACATTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 90 bp CCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTaGAGGGCTGTATCTCCCTTTGTGTTTTCAGAAGCCCAGAGTGGC +
Preference number: 1 (lower is better)
Translates to: PRTSGPFVSLCKAHS*RAVSPFVFSEAQSG
Trigger: GCCACTCTGGGCTTCTGAAAACACAAAGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp ACCCTATGTAAACAACGGCTTTCCCTCAAAGGGAGGGCCCCACACTaGTCTCCACTCTTATCATTTTGTGGCTCTCTCCTCCTCACCCAC +
Preference number: 1 (lower is better)
Translates to: TLCKQRLSLKGRAPH*SPLLSFCGSLLLTH
Trigger: GTGGGTGAGGAGGAGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGGGAAAGCCGTTGTTTACATAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 90 bp AAGTCTAACCTCTGGGGCTGGCCAATAACCACTGAGGCAGTGGCGTaGGGTTCAGTGTTGTGTAACAGGAGAGAGAGACTCTGCCTTAAC +
Preference number: 1 (lower is better)
Translates to: KSNLWGWPITTEAVA*GSVLCNRRERLCLN
Trigger: GTTAAGGCAGAGTCTCTCTCTCCTGTTACACAACACTGAACCTCACGCCACTGCCTCAGTGGTTATTGGCCAGCCCCAGAGGTTAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp GCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTaGTGCCATGCAGAGATCAAACAAGCAAAGGAGAAGCACTATGGA +
Preference number: 1 (lower is better)
Translates to: ALHFGVWAPNVELPH*CHAEIKQAKEKHYG
Trigger: TCCATAGTGCTTCTCCTTTGCTTGTTTGATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAATGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp GCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTaGAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTTGTGTTTTCA +
Preference number: 1 (lower is better)
Translates to: ALVFHPRTSGPFVSL*KAHSWRAVSPFVFS
Trigger: TGAAAACACAAAGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 90 bp GAGGACTCTCACAGATACCAAGGAGTTTTACTACCAAGGCCAGCATaGTATTGCAGGACAGTGCTGGGGAGTTGTCACAAGAGTATGGGT +
Preference number: 1 (lower is better)
Translates to: EDSHRYQGVLLPRPA*YCRTVLGSCHKSMG
Trigger: ACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAACTCCTTGGTATCTGTGAGAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATaGAGAGATCAAACAAGCAAAGGAGAAGCACTATGGAACCACAAA +
Preference number: 1 (lower is better)
Translates to: FWSMGSKCGAAPLLP*RDQTSKGEALWNHK
Trigger: TTTGTGGTTCCATAGTGCTTCTCCTTTGCTTGTTTGATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 90 bp CCGGTTCAGACCATAAATTCATTATTTCCAAAGAGTGCTAGCTGTTaGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGAC +
Preference number: 1 (lower is better)
Translates to: PVQTINSLFPKSASC*LEVQSGSTVFLRPD
Trigger: GTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGAATTTATGGTCTGAACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR TCA 90 bp TTTACCAAAGTGCTTGTTACAGTGAAAAACACAGCCCACAGGCACTaGGGTGGGACTACAGAACCTTGCTGGACCACATCTTTTCAGCAC +
Preference number: 1 (lower is better)
Translates to: FTKVLVTVKNTAHRH*GGTTEPCWTTSFQH
Trigger: GTGCTGAAAAGATGTGGTCCAGCAAGGTTCTGTAGTCCCACCTCAGTGCCTGTGGGCTGTGTTTTTCACTGTAACAAGCACTTTGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp ACCAAGGAGTTTTACTACCAAGGCCAGCATGGTATTGCAGGACAGTaGTGGGGAGTTGTCACAAGAGTATGGGTGGACATAACACATTTG +
Preference number: 1 (lower is better)
Translates to: TKEFYYQGQHGIAGQ*WGVVTRVWVDITHL
Trigger: CAAATGTGTTATGTCCACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAACTCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 90 bp AAGGAGTTTTACTACCAAGGCCAGCATGGTATTGCAGGACAGTGCTaGGGAGTTGTCACAAGAGTATGGGTGGACATAACACATTTGTCC +
Preference number: 1 (lower is better)
Translates to: KEFYYQGQHGIAGQC*GVVTRVWVDITHLS
Trigger: GGACAAATGTGTTATGTCCACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAACTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 90 bp AGAGGGCCAGTGAGAACAGATGGATGCAGACACAGCGTTTGGTTCTaGAGGTTTTTAAGAGTTATGGCTTCATCTCTTGATCAGGCCAAC +
Preference number: 1 (lower is better)
Translates to: RGPVRTDGCRHSVWF*RFLRVMASSLDQAN
Trigger: GTTGGCCTGATCAAGAGATGAAGCCATAACTCTTAAAAACCTTCAGAACCAAACGCTGTGTCTGCATCCATCTGTTCTCACTGGCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp TCTGAGTCTGTGGTGGGAATCCACCAGCAGATGAACAGGCTCATATaGGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCCTGAATGGC +
Preference number: 1 (lower is better)
Translates to: SESVVGIHQQMNRLI*GFRFNLYKEKSLNG
Trigger: GCCATTCAGGCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTGCTGGTGGATTCCCACCACAGACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp CATAAAGAGGAGACCGAAGAGTCCACGACATCTAAAGAGTCTTGCTaGTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTG +
Preference number: 1 (lower is better)
Translates to: HKEETEESTTSKESC*FLSCFRNLLEGSDL
Trigger: CAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGATGTCGTGGACTCTTCGGTCTCCTCTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR GCA 90 bp AGACATAAAGAGGAGACCGAAGAGTCCACGACATCTAAAGAGTCTTaGTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGAC +
Preference number: 1 (lower is better)
Translates to: RHKEETEESTTSKES*CFLSCFRNLLEGSD
Trigger: GTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGATGTCGTGGACTCTTCGGTCTCCTCTTTATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR TCA 90 bp TTTGTTTGTTTGAGTCTGAGTCTGTGGTGGGAATCCACCAGCAGATaGACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGA +
Preference number: 1 (lower is better)
Translates to: FVCLSLSLWWESTSR*TGSYAVFGLIYTKR
Trigger: TCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTGCTGGTGGATTCCCACCACAGACTCAGACTCAAACAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 90 bp GTGAATGCCTACTATGTTTATAGGCACTGTACTGCCCTTCACAAATaGTTCTCACTTAATGGGGAGGAACCCAGTATTTACTCTGCTATT +
Preference number: 1 (lower is better)
Translates to: VNAYYVYRHCTALHK*FSLNGEEPSIYSAI
Trigger: AATAGCAGAGTAAATACTGGGTTCCTCCCCATTAAGTGAGAAGCATTTGTGAAGGGCAGTACAGTGCCTATAAACATAGTAGGCATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
3UTR TCA 90 bp CTGATTGAGATAATGATATTCCTCTGGTTGCTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATAC +
Preference number: 1 (lower is better)
Translates to: LIEIMIFLWLLKMEC*SLIFTCSCQEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAGCAACCAGAGGAATATCATTATCTCAATCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
3UTR TCA 90 bp GTACATACTAAATTACAGGGATACATTCACTTTAATGGGCAGAGTTaGAAATTCAGGTTTTGTTTGGGGCTGGGAATGTGTGCTGTGAGA +
Preference number: 1 (lower is better)
Translates to: VHTKLQGYIHFNGQS*KFRFCLGLGMCAVR
Trigger: TCTCACAGCACACATTCCCAGCCCCAAACAAAACCTGAATTTTCAACTCTGCCCATTAAAGTGAATGTATCCCTGTAATTTAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 90 bp CAGAGATCAAACAAGCAAAGGAGAAGCACTATGGAACCACAAATGTaGTGCATATTAAGGGCTAACAGTTTCATAAGTGATTGTAATGCG +
Preference number: 1 (lower is better)
Translates to: QRSNKQRRSTMEPQM*CILRANSFISDCNA
Trigger: CGCATTACAATCACTTATGAAACTGTTAGCCCTTAATATGCATCACATTTGTGGTTCCATAGTGCTTCTCCTTTGCTTGTTTGATCTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 90 bp CAAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTaGAGCAGAACAAGGCACCTTAATAAAAATACTCCAAGAAGTTTC +
Preference number: 1 (lower is better)
Translates to: QRENGQVEQPLYTNS*SRTRHLNKNTPRSF
Trigger: GAAACTTCTTGGAGTATTTTTATTAAGGTGCCTTGTTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566885.5
3UTR TCA 90 bp TTTCGGTTTAATCTATACAAAGAGAAAAGCCTGAATGGCTTAGGATaGAACCTTCATAAGTTTAGGGATCACCATGTCTCTGGGAAACTA +
Preference number: 1 (lower is better)
Translates to: FRFNLYKEKSLNGLG*NLHKFRDHHVSGKL
Trigger: TAGTTTCCCAGAGACATGGTGATCCCTAAACTTATGAAGGTTTCATCCTAAGCCATTCAGGCTTTTCTCTTTGTATAGATTAAACCGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 90 bp ATTTGTTCATCAAGCTGCTTTTGTGTAGCCATACAGTGCATATTTTaGGTGACACAAACTGCACTTTATACAGATGGTATCTTGTTACCC +
Preference number: 1 (lower is better)
Translates to: ICSSSCFCVAIQCIF*VTQTALYTDGILLP
Trigger: GGGTAACAAGATACCATCTGTATAAAGTGCAGTTTGTGTCACTCAAAATATGCACTGTATGGCTACACAAAAGCAGCTTGATGAACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 90 bp ATTTATTACTCCTCAGGACAAGATGAACAAGGTGGCAGATGTCTGTaGGATATAAAGCATAACATTTGCTCATTAACTATCATTATTCTG +
Preference number: 1 (lower is better)
Translates to: IYYSSGQDEQGGRCL*DIKHNICSLTIIIL
Trigger: CAGAATAATGATAGTTAATGAGCAAATGTTATGCTTTATATCCCACAGACATCTGCCACCTTGTTCATCTTGTCCTGAGGAGTAATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCCCCAGCAGGCTTTCTaGTTCTGCAGGAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPPQQAF*FCRRPR
Trigger: CCTGGGCCTCCTGCAGAAGCAGAAAGCCTGCTGGGG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR CCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCACAGACTGTGCAACCTaGCACGGGGCTGAGGAACCA +
Preference number: 2 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGTDCAT*HGAEEP
Trigger: TGGTTCCTCAGCCCCGTGCCAGGTTGCACAGTCTGT...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGCTGGCCAATAACCACTaGGGCAGTGGCGTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGLANNH*GSGVRF
Trigger: GAACCTCACGCCACTGCCTCAGTGGTTATTGGCCAG...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCAGCCAAGGCACAGCTaGCACCATCCCCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHQPRHS*HHPQQA
Trigger: AGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCTTTGGTCTGGCCCAATaGTCCTTCCATTCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGFGLAQ*SFHSQG
Trigger: GCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAA...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR CAA 90 bp TGTTTGGGGCTGGGAATGTGTGCTGTGAGAAGAGTGCTCTGCATTTaGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: CLGLGMCAVRRVLCI*EYGLQMWSCPTAAM
Trigger: CATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACACATTCCCAGCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCACGCAGCCCCAAAGGTaGGATTTGTTTACCACTCTG +
Preference number: 2 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRATQPQR*DLFTTL
Trigger: CAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGT...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR TCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATAGAGGCAACTACAACTaGCCCAAATCCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDRGNYN*PKSPGP
Trigger: AGGGCCTGGGGATTTGGGTCAGTTGTAGTTGCCTCT...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCGAATCCACCAGCAGATaGACAGGCTCATATGCGGTT +
Preference number: 2 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCESTSR*TGSYAV
Trigger: AACCGCATATGAGCCTGTTCATCTGCTGGTGGATTC...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTCAGCCAAGGCACAGCTaGCACCATCCCCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICQPRHS*HHPQQA
Trigger: AGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTG...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCAGAGGCAACTACAACTaGCCCAAATCCCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPRGNYN*PKSPGP
Trigger: AGGGCCTGGGGATTTGGGTCAGTTGTAGTTGCCTCT...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR TCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCCTCTCCCAAGAACACTaGAACACAGACTGTGCAACC +
Preference number: 2 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGLSQEH*NTDCAT
Trigger: GGTTGCACAGTCTGTGTTTCAGTGTTCTTGGGAGAG...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCAGTTTTCTGGTCCCATaGGATGATGCCGTGTTAGAC +
Preference number: 2 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRASFLVP*DDAVLD
Trigger: GTCTAACACGGCATCATCTCATGGGACCAGAAAACT...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR CCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGCAACCCAGGGACGAATaGCTCTCATCCCCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEQPRDE*LSSPCP
Trigger: TGGACAGGGGGATGAGAGCCATTCGTCCCTGGGTTG...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCCTGCATTTTGGAGTATaGGCTCCAAATGTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCLHFGV*APNVEL
Trigger: CAGCTCCACATTTGGAGCCCATACTCCAAAATGCAG...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAGCTTTCGCAACTTGCTaGAAGGTTCAGACTTGCCAG +
Preference number: 2 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTAFATC*KVQTCQ
Trigger: CTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGC...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR TCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTTCAAATGTCAGAAATaGGAGGGTCCCTCAGGACAG +
Preference number: 2 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGFKCQK*EGPSGQ
Trigger: CTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTCTCTGGCTCAATTCTaGACCCAAAGTAGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGSLAQF*TQSRER
Trigger: CCTCTCCCTACTTTGGGTTCAGAATTGAGCCAGAGA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTCTGCGGCCAGACATaGCTGTCCCCTCTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRFCGQT*LSPLGS
Trigger: AGACCCCAGAGGGGACAGTCATGTCTGGCCGCAGAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR GCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCCCCCAGCAGGCTTTCTaGTTCTGCAGGAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLPQQAF*FCRRPR
Trigger: CCTGGGCCTCCTGCAGAAGCAGAAAGCCTGCTGGGG...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTGCCCCACTGCTGCCATaGAGAGATCAAACAAGCAAA +
Preference number: 2 (lower is better)
Translates to: LALLSLSARLIVGGLYLPAPLLP*RDQTSK
Trigger: TTTGCTTGTTTGATCTCTGCATGGCAGCAGTGGGGC...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAATTCAGGTTTTGTTTaGGGCTGGGAATGTGTGCTG +
Preference number: 2 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCNSGFV*GWECVL
Trigger: CAGCACACATTCCCAGCCCCAAACAAAACCTGAATT...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCTGTCTTCCAGGAATTTaGTCTGGCCCAATGGTCCTT +
Preference number: 2 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGCLPGI*SGPMVL
Trigger: AAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR CAA 90 bp CAGTGCTGGGGAGTTGTCACAAGAGTATGGGTGGACATAACACATTaGTCCATACAGAATGATGCATGCCCCGCATCCAGCTTCCCACCA +
Preference number: 2 (lower is better)
Translates to: QCWGVVTRVWVDITH*SIQNDACPASSFPP
Trigger: TGGTGGGAAGCTGGATGCGGGGCATGCATCATTCTGTATGGACAAATGTGTTATGTCCACCCATACTCTTGTGACAACTCCCCAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGACTGAGGCAGTGGCGTaGGGTTCAGTGTTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: VCCEKSALHFGVWAPNVETEAVA*GSVLCN
Trigger: GTTACACAACACTGAACCTCACGCCACTGCCTCAGT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTATGGCTTCATCTCTTaGTCAGGCCAACAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGYGFIS*SGQQGL
Trigger: TAGGCCTTGTTGGCCTGATCAAGAGATGAAGCCATA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCTVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTTCTGGCCATTCCTCTaGGCCACAGGAAATTATTCC +
Preference number: 2 (lower is better)
Translates to: LALLSLSARLIVGGLYLPFWPFL*ATGNYS
Trigger: GGAATAATTTCCTGTGGCCCAGAGGAATGGCCAGAA...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CAA 90 bp CTCTCACAGATACCAAGGAGTTTTACTACCAAGGCCAGCATGGTATaGCAGGACAGTGCTGGGGAGTTGTCACAAGAGTATGGGTGGACA +
Preference number: 2 (lower is better)
Translates to: LSQIPRSFTTKASMV*QDSAGELSQEYGWT
Trigger: TGTCCACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAACTCCTTGGTATCTGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATGGCATCACTTTGTGGTaGCATAACTTTACCATGCAG +
Preference number: 2 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDGITLW*HNFTMQ
Trigger: CTGCATGGTAAAGTTATGTCACCACAAAGTGATGCC...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTGCCACTCAGAATTATaGTCCAAGTCTAACCTCTGG +
Preference number: 2 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGCHSEL*SKSNLW
Trigger: CCAGAGGTTAGACTTGGAGCATAATTCTGAGTGGCA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCCTGCTACCTTTAGCTaGCACTCAGAATTATGCTCC +
Preference number: 2 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSPATFS*HSELCS
Trigger: GGAGCATAATTCTGAGTGGCAGCTAAAGGTAGCAGG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTTCCCCAGGCCCTAGGTaGCTTTGTATAGTAAAAATC +
Preference number: 2 (lower is better)
Translates to: PQREGPTLLSTLIILWLSSPGPR*LCIVKI
Trigger: GATTTTTACTATACAAAGCCACCTAGGGCCTGGGGA...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTTCAACACCCACCTTTaGGAAGGGAAAAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSFNTHL*EGKRGW
Trigger: CCACCCTCTTTTCCCTTCCCAAAGGTGGGTGTTGAA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
3UTR-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAGAGAAAAGCCTGAATaGCTTAGGATGAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCREKPE*LRMKPS
Trigger: TGAAGGTTTCATCCTAAGCCATTCAGGCTTTTCTCT...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCAACATATGTTCTTCTaGCCATTCCTCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSQHMFF*PFLWAT
Trigger: TGTGGCCCAGAGGAATGGCCAGAAGAACATATGTTG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCGGCAGCTCGGTAGAATaGAGATTTGGAATAAATCTG +
Preference number: 2 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGGSSVE*RFGINL
Trigger: CAGATTTATTCCAAATCTCCATTCTACCGAGCTGCC...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTACGCAGCCCCAAAGGTaGGATTTGTTTACCACTCTG +
Preference number: 2 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICTQPQR*DLFTTL
Trigger: CAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTTCAAATGTCAGAAATaGGAGGGTCCCTCAGGACAG +
Preference number: 2 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSFKCQK*EGPSGQ
Trigger: CTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
3UTR-3UTR TCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTTATAACTCATGTGTATaGAGACCACCCAGTGGTGAA +
Preference number: 2 (lower is better)
Translates to: PQREGPTLLSTLIILWLSYNSCV*RPPSGE
Trigger: TTCACCACTGGGTGGTCTTCATACACATGAGTTATA...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACACCTCTGCTGATGAACTaGGGCTTGTCTTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTPLLMN*GLSSRN
Trigger: ATTCCTGGAAGACAAGCCTCAGTTCATCAGCAGAGG...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR GCA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAATGGAAGGTTCAGACTTaGCAGCTGTCTTCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSEWKVQT*QLSSGS
Trigger: GCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCA...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTCCCCAGGCCCTAGGTaGCTTTGTATAGTAAAAATC +
Preference number: 2 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPSPGPR*LCIVKI
Trigger: GATTTTTACTATACAAAGCCACCTAGGGCCTGGGGA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGACGCAGCCCCAAAGGTaGGATTTGTTTACCACTCTG +
Preference number: 2 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRTQPQR*DLFTTL
Trigger: CAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR CAA 90 bp AGTCTTAGCCATATGCTTAGAAAAGAGGCAGGACCACAATTAGGATaGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAG +
Preference number: 2 (lower is better)
Translates to: SLSHMLRKEAGPQLG*TIVDEVMKRSPKGE
Trigger: CTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCTAAGCATATGGCTAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR CAA 90 bp GCAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTaGGTTTCCAGTAGGCCAAAAGTGCTTATGAAGTTGCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: AAMALSKTRATANNS*VSSRPKVLMKLPSH
Trigger: GTGGGAGGGCAACTTCATAAGCACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR-3UTR TCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCACAGCGTTTGGTTCTaGAGGTTTTTAAGAGTTATG +
Preference number: 2 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSHSVWF*RFLRVM
Trigger: CATAACTCTTAAAAACCTTCAGAACCAAACGCTGTG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCCCCAGGCCCTAGGTaGCTTTGTATAGTAAAAATC +
Preference number: 2 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSPGPR*LCIVKI
Trigger: GATTTTTACTATACAAAGCCACCTAGGGCCTGGGGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR CCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGCACCCACCCCAATCCTaGCAGATTAAATTACTAGAA +
Preference number: 2 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEHPPQS*QIKLLE
Trigger: TTCTAGTAATTTAATCTGCCAGGATTGGGGTGGGTG...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGAACCTGGCACGGGGCTaGGGAACCAGCAATCCCACT +
Preference number: 2 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGNLARG*GTSNPT
Trigger: AGTGGGATTGCTGGTTCCTCAGCCCCGTGCCAGGTT...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCATCCCCCTGTCCAGTaGCCCCTCATCTGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGHPPVQ*PLICGK
Trigger: CTTCCCACAGATGAGGGGCCACTGGACAGGGGGATG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRTVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAGGGGCTGGGAATGTGTaGTGTGAGAAGAGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLGAGNV*CEKSAL
Trigger: CAGAGCACTCTTCTCACAGCACACATTCCCAGCCCC...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGGGAGGGCCCCACACTaGTCTCCACTCTTATCATTT +
Preference number: 2 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLGRAPH*SPLLSF
Trigger: AAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAGAACAGTATGGCTACTaGCACTTCAGCCCATGCAAT +
Preference number: 2 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLEQYGY*HFSPCN
Trigger: ATTGCATGGGCTGAAGTGTCAGTAGCCATACTGTTC...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTCCTCAGGACAAGATaGACAAGGTGGCAGATGTCT +
Preference number: 2 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGLLRTR*TRWQMS
Trigger: AGACATCTGCCACCTTGTTCATCTTGTCCTGAGGAG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGTGGGAATGTGTGCTGTaGGAAGAGTGCTCTGCATTT +
Preference number: 2 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLWECVL*EECSAF
Trigger: AAATGCAGAGCACTCTTCTCACAGCACACATTCCCA...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGGAGAGATTTTATGATTaGAGGGGGAGGCATACAGAA +
Preference number: 2 (lower is better)
Translates to: SKTRATANNSLVSSRPKVERFYD*RGRHTE
Trigger: TTCTGTATGCCTCCCCCTTCAATCATAAAATCTCTC...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACCCTCCCACAGAAAATaGGATGAGAGATTTTATGAT +
Preference number: 2 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPPSHRK*DERFYD
Trigger: ATCATAAAATCTCTCATCTCATTTTCTGTGGGAGGG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR-3UTR GCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTATVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
3UTR-3UTR GCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCATGAACAGGCTCATATaGGGTTTTCGGTTTAATCTA +
Preference number: 2 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLMNRLI*GFRFNL
Trigger: TAGATTAAACCGAAAACCGCATATGAGCCTGTTCAT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGCCTTTTGTCTCTCTCTaGAAGGCTCATAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLPFVSL*KAHSWR
Trigger: CCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGG...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp TCTCATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGTTCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATT +
Preference number: 2 (lower is better)
Translates to: SHLHLLLPGGNRIHDSSVPDKRV*TSPVDI
Trigger: AATATCTACTGGAGAAGTCCAGACTCGTTTATCAGG...AACGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
3UTR CAA 90 bp TTGTTCTTTAATGAGCCATGGGGTGATTTGTTCATCAAGCTGCTTTaGTGTAGCCATACAGTGCATATTTTGAGTGACACAAACTGCACT +
Preference number: 2 (lower is better)
Translates to: LFFNEPWGDLFIKLL*CSHTVHILSDTNCT
Trigger: AGTGCAGTTTGTGTCACTCAAAATATGCACTGTATGGCTACACAAAAGCAGCTTGATGAACAAATCACCCCATGGCTCATTAAAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGTGACCCTCTGTTTTTaGTGGAGAAAACAACGCTAC +
Preference number: 2 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLVTLCF*WRKQRY
Trigger: GTAGCGTTGTTTTCTCCATCAAAAACAGAGGGTCAC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGGAGATGACACTAGATTaGCTACAGAAGCAGGATTTT +
Preference number: 2 (lower is better)
Translates to: SKTRATANNSLVSSRPKVEMTLD*LQKQDF
Trigger: AAAATCCTGCTTCTGTAGTCAATCTAGTGTCATCTC...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAAGAAAATGGCCAAGTTaGGCAGCCACTTTACACAAA +
Preference number: 2 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPRKWPS*AATLHK
Trigger: TTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
3UTR-3UTR GCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGGACATAACTTTACCATaGAGAGGGCCAGTGAGAACA +
Preference number: 2 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGDITLP*RGPVRT
Trigger: TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTC...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGAACATGAGAACAGTATaGCTACTGACACTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGNMRTV*LLTLQP
Trigger: GGGCTGAAGTGTCAGTAGCCATACTGTTCTCATGTT...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTTTACACAAATAGTTaGAGCAGAACAAGGCACCTT +
Preference number: 2 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLYTNS*SRTRHL
Trigger: AAGGTGCCTTGTTCTGCTCCAACTATTTGTGTAAAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
3UTR CAA 90 bp ATACGAATCTGTAGTCCACACCTTTCCCATAGTAAATACAAATACTaGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGATA +
Preference number: 2 (lower is better)
Translates to: IRICSPHLSHSKYKY*VQKVQLLYDLRGLI
Trigger: TATCAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACTATGGGAAAGGTGTGGACTACAGATTCGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp CTTTGTTATCTGATTGAGATAATGATATTCCTCTGGTTGCTTAAGATGGAATGCATCTTCACTTGCTCCTaGCAGGAGGTAATAGAATAC +
Preference number: 2 (lower is better)
Translates to: LCYLIEIMIFLWLLKMECIFTCS*QEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT...GCATTCCATCTTAAGCAACCAGAGGAATATCATTATCTCAATCAGATAACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
3UTR-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTCAGCAAACAATAGTTTaGTTTCCAGTAGGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: RVVFTLWYSTELYIFALCQQTIV*FPVGQK
Trigger: CTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTG...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGGCTTTGAACACATCCTaGGAATCCTTTCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGALNTS*ESFLLS
Trigger: AGAAAGAAGAAAGGATTCTCAGGATGTGTTCAAAGC...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR GCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTCACTTCATGAACAGATaGTCTGACTTTATCCTCATT +
Preference number: 2 (lower is better)
Translates to: RVVFTLWYSTELYIFALCHFMNR*SDFILI
Trigger: AATGAGGATAAAGTCAGAGCATCTGTTCATGAAGTG...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR TCA 72 bp ACACTGAAACACAGACTGTGCAACCTGGCACGGGGCTaGGGAACCAGCAATCCCACTCTAACACACCATGCT +
Preference number: 3 (lower is better)
Translates to: TLKHRLCNLARG*GTSNPTLTHHA
Trigger: AGCATGGTGTGTTAGAGTGGGATTGCTGGTTCCTCAGCCCCGTGCCAGGTTGCACAGTCTGTGTTTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 72 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATaGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCAT +
Preference number: 3 (lower is better)
Translates to: VCCEKSALHFGV*APNVELPHCCH
Trigger: ATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCTGGAAGGTTCAGACTaGCCAGCTGTCTTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLEGSD*PAVFRE
Trigger: CTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR-3UTR CAA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCTTGTCTTCCAGGAATTaGGTCTGGCCCAATGGTCCT +
Preference number: 3 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGLSSRN*VWPNGP
Trigger: AGGACCATTGGGCCAGACCAAATTCCTGGAAGACAA...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR TCA 72 bp TTAATGCCCAGCAGTACACTACTCTCCCAAGAACACTaGAACACAGACTGTGCAACCTGGCACGGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: LMPSSTLLSQEH*NTDCATWHGAE
Trigger: CTCAGCCCCGTGCCAGGTTGCACAGTCTGTGTTTCAGTGTTCTTGGGAGAGTAGTGTACTGCTGGGCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 72 bp AAACAACGGCTTTCCCTCAAAGGGAGGGCCCCACACTaGTCTCCACTCTTATCATTTTGTGGCTCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: KQRLSLKGRAPH*SPLLSFCGSLL
Trigger: GAGGAGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGGGAAAGCCGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 72 bp TTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTaGAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: FHPRTSGPFVSL*KAHSWRAVSPF
Trigger: AAAGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGGGGCTGTATCTCCCTTaGTGTTTTCAGAAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGGLYLP*CFQKPR
Trigger: TCTGGGCTTCTGAAAACACAAAGGGAGATACAGCCC...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTGGACCACAATTAGGATaGACTATTGTGGACGAGGTG +
Preference number: 3 (lower is better)
Translates to: PQREGPTLLSTLIILWLSGPQLG*TIVDEV
Trigger: CACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTTATGGCTTCATCTCTaGATCAGGCCAACAAGGCCT +
Preference number: 3 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGLWLHL*IRPTRP
Trigger: AGGCCTTGTTGGCCTGATCAAGAGATGAAGCCATAA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 72 bp TTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTaGTGCCATGCAGAGATCAAACAAGCAAAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: FGVWAPNVELPH*CHAEIKQAKEK
Trigger: CTTCTCCTTTGCTTGTTTGATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTAGAGTGCTCTGCATTTaGGAGTATGGGCTCCAAATG +
Preference number: 3 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSRVLCI*EYGLQM
Trigger: CATTTGGAGCCCATACTCCAAAATGCAGAGCACTCT...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 72 bp CTGAGGAACCAGCAATCCCACTCTAACACACCATGCTaGGGGGTTTTCCTCTATCCTCTAGGAGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: LRNQQSHSNTPC*GVFLYPLGDSL
Trigger: CAGAGAATCTCCTAGAGGATAGAGGAAAACCCCTCAGCATGGTGTGTTAGAGTGGGATTGCTGGTTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 72 bp TCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTaGAGGGCTGTATCTCCCTTTGTGTTTTCAGAAGCC +
Preference number: 3 (lower is better)
Translates to: SGPFVSLCKAHS*RAVSPFVFSEA
Trigger: GGCTTCTGAAAACACAAAGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 72 bp TACTACCAAGGCCAGCATGGTATTGCAGGACAGTGCTaGGGAGTTGTCACAAGAGTATGGGTGGACATAACA +
Preference number: 3 (lower is better)
Translates to: YYQGQHGIAGQC*GVVTRVWVDIT
Trigger: TGTTATGTCCACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 72 bp CACAGATACCAAGGAGTTTTACTACCAAGGCCAGCATaGTATTGCAGGACAGTGCTGGGGAGTTGTCACAAG +
Preference number: 3 (lower is better)
Translates to: HRYQGVLLPRPA*YCRTVLGSCHK
Trigger: CTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAACTCCTTGGTATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 72 bp AGTATGGGTGGACATAACACATTTGTCCATACAGAATaGTGCATGCCCCGCATCCAGCTTCCCACCAAGAAG +
Preference number: 3 (lower is better)
Translates to: SMGGHNTFVHTE*CMPRIQLPTKK
Trigger: CTTCTTGGTGGGAAGCTGGATGCGGGGCATGCATCATTCTGTATGGACAAATGTGTTATGTCCACCCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 72 bp TTTTACTACCAAGGCCAGCATGGTATTGCAGGACAGTaGTGGGGAGTTGTCACAAGAGTATGGGTGGACATA +
Preference number: 3 (lower is better)
Translates to: FYYQGQHGIAGQ*WGVVTRVWVDI
Trigger: TATGTCCACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGACCACAATTAGGATaGACTATTGTGGACGAGGTG +
Preference number: 3 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKGPQLG*TIVDEV
Trigger: CACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGACCACAATTAGGATaGACTATTGTGGACGAGGTG +
Preference number: 3 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEGPQLG*TIVDEV
Trigger: CACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR-3UTR CAA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAAAGTTGCTTTCGCAACTaGCTGGAAGGTTCAGACTTG +
Preference number: 3 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSESCFRN*LEGSDL
Trigger: CAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACT...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR GCA 72 bp GAGACCGAAGAGTCCACGACATCTAAAGAGTCTTGCTaGTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: ETEESTTSKESC*FLSCFRNLLEG
Trigger: ACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGATGTCGTGGACTCTTCGGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR GCA 72 bp GAGGAGACCGAAGAGTCCACGACATCTAAAGAGTCTTaGTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: EETEESTTSKES*CFLSCFRNLLE
Trigger: TTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGATGTCGTGGACTCTTCGGTCTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
3UTR CCA 72 bp ATTGCAGGACAGTGCTGGGGAGTTGTCACAAGAGTATaGGTGGACATAACACATTTGTCCATACAGAATGAT +
Preference number: 3 (lower is better)
Translates to: IAGQCWGVVTRV*VDITHLSIQND
Trigger: ATCATTCTGTATGGACAAATGTGTTATGTCCACCCATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 72 bp ACTAAACTTCACAGCTGTAAAGCAACCAGTATTCGGTaGATGCCTACTATGTTTATAGGCACTGTACTGCCC +
Preference number: 3 (lower is better)
Translates to: TKLHSCKATSIR*MPTMFIGTVLP
Trigger: GGGCAGTACAGTGCCTATAAACATAGTAGGCATTCACCGAATACTGGTTGCTTTACAGCTGTGAAGTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
3UTR TCA 72 bp ATAATGATATTCCTCTGGTTGCTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGCTCCTGCCAGGAGGTA +
Preference number: 3 (lower is better)
Translates to: IMIFLWLLKMEC*SLIFTCSCQEV
Trigger: TACCTCCTGGCAGGAGCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAGCAACCAGAGGAATATCATTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
3UTR CCA 72 bp AATCTGATCCTAGGACCAAGAAACATGAGAACAGTATaGCTACTGACACTTCAGCCCATGCAATGTATTTGG +
Preference number: 3 (lower is better)
Translates to: NLILGPRNMRTV*LLTLQPMQCIW
Trigger: CCAAATACATTGCATGGGCTGAAGTGTCAGTAGCCATACTGTTCTCATGTTTCTTGGTCCTAGGATCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 72 bp GTTCTGAAGGTTTTTAAGAGTTATGGCTTCATCTCTTaGTCAGGCCAACAAGGCCTACTACCCTATGTAAAC +
Preference number: 3 (lower is better)
Translates to: VLKVFKSYGFIS*SGQQGLLPYVN
Trigger: GTTTACATAGGGTAGTAGGCCTTGTTGGCCTGATCAAGAGATGAAGCCATAACTCTTAAAAACCTTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 72 bp GTGAGAACAGATGGATGCAGACACAGCGTTTGGTTCTaGAGGTTTTTAAGAGTTATGGCTTCATCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: VRTDGCRHSVWF*RFLRVMASSLD
Trigger: ATCAAGAGATGAAGCCATAACTCTTAAAAACCTTCAGAACCAAACGCTGTGTCTGCATCCATCTGTTCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR GCA 72 bp TACTATGTTTATAGGCACTGTACTGCCCTTCACAAATaGTTCTCACTTAATGGGGAGGAACCCAGTATTTAC +
Preference number: 3 (lower is better)
Translates to: YYVYRHCTALHK*FSLNGEEPSIY
Trigger: GTAAATACTGGGTTCCTCCCCATTAAGTGAGAAGCATTTGTGAAGGGCAGTACAGTGCCTATAAACATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
3UTR-3UTR CAA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGAGAGATGACACTAGATaGACTACAGAAGCAGGATTT +
Preference number: 3 (lower is better)
Translates to: SKTRATANNSLVSSRPKVRDDTR*TTEAGF
Trigger: AAATCCTGCTTCTGTAGTCAATCTAGTGTCATCTCT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR CCA 72 bp AACCTAGGTGGTAGTTCCAGGGTTGTGTTTACTTTGTaGTACTCCACTGAACTATACATTTTTGCTTTGTGT +
Preference number: 3 (lower is better)
Translates to: NLGGSSRVVFTL*YSTELYIFALC
Trigger: ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCTGGAACTACCACCTAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR-3UTR CAA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGGAATTCTACTCCTTTTaGTGGAGAAGTAGAAAGGTA +
Preference number: 3 (lower is better)
Translates to: SKTRATANNSLVSSRPKVEFYSF*WRSRKV
Trigger: TACCTTTCTACTTCTCCACAAAAAGGAGTAGAATTC...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR TCA 72 bp AAATTACAGGGATACATTCACTTTAATGGGCAGAGTTaGAAATTCAGGTTTTGTTTGGGGCTGGGAATGTGT +
Preference number: 3 (lower is better)
Translates to: KLQGYIHFNGQS*KFRFCLGLGMC
Trigger: ACACATTCCCAGCCCCAAACAAAACCTGAATTTTCAACTCTGCCCATTAAAGTGAATGTATCCCTGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR TCA 72 bp TCAAGCTGCTTTTGTGTAGCCATACAGTGCATATTTTaGGTGACACAAACTGCACTTTATACAGATGGTATC +
Preference number: 3 (lower is better)
Translates to: SSCFCVAIQCIF*VTQTALYTDGI
Trigger: GATACCATCTGTATAAAGTGCAGTTTGTGTCACTCAAAATATGCACTGTATGGCTACACAAAAGCAGCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR-3UTR CAA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTACAGCAAACAATAGTTaGGTTTCCAGTAGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: RVVFTLWYSTELYIFALCTANNS*VSSRPK
Trigger: TTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR TCA 72 bp AATCTATACAAAGAGAAAAGCCTGAATGGCTTAGGATaGAACCTTCATAAGTTTAGGGATCACCATGTCTCT +
Preference number: 3 (lower is better)
Translates to: NLYKEKSLNGLG*NLHKFRDHHVS
Trigger: AGAGACATGGTGATCCCTAAACTTATGAAGGTTTCATCCTAAGCCATTCAGGCTTTTCTCTTTGTATAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CCA 72 bp GTAGTCCACACCTTTCCCATAGTAAATACAAATACTTaGTTCAAAAGGTGCAACTTTTATATGACCTCAGAG +
Preference number: 3 (lower is better)
Translates to: VVHTFPIVNTNT*FKRCNFYMTSE
Trigger: CTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACTATGGGAAAGGTGTGGACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTGGCCGCCTCTGCCGGTaGAACTACTGCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSGRLCR*NYCLRR
Trigger: GCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCC...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGCCAAGGCACAGCTaGCACCATCCCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGQPRHS*HHPQQA
Trigger: AGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTG...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTGCCGGTGCAACTACTaGCTCCGCCGCCGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHCRCNY*LRRRLS
Trigger: CGAGAGGCGGCGGCGGAGGCAGTAGTTGCACCGGCA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTCTCTTCGACGGAAGCTaGCTTCCACCCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSLFDGS*LPPSAP
Trigger: TGGGGCGGAGGGTGGAAGGCAGCTTCCGTCGAAGAG...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGCTCTTCGACGGAAGCTaGCTTCCACCCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRLFDGS*LPPSAP
Trigger: TGGGGCGGAGGGTGGAAGGCAGCTTCCGTCGAAGAG...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGGGCAGCGGAGAATaGAGGGCGCAAACACAATGG +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGQGSGE*RAQTQW
Trigger: CCATTGTGTTTGCGCCCTGCATTCTCCGCTGCCCTG...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATGTACCCCGTGGAGACTaGAGGCCTTCAGGCACCAAT +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHVPRGD*RPSGTN
Trigger: ATTGGTGCCTGAAGGCCTTCAGTCTCCACGGGGTAC...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCGAGTGGCGAAACCTCTaGCTGGGTAGTAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRAEWRNL*LGSRFH
Trigger: GTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTC...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTTCTGCGGCCAGACATaGCTGTCCCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPFCGQT*LSPLGS
Trigger: AGACCCCAGAGGGGACAGTCATGTCTGGCCGCAGAA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCGTCAGTCTCCATGGCTaGCTCACTAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRAVSLHG*LTSQGL
Trigger: GAGACCTTGACTAGTGAGGCAGCCATGGAGACTGAC...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGCTCCAAATGTGGAGCTaGCCCACTGCTGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGLQMWS*PTAAMQ
Trigger: CTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAG...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAAGACTCCGCCCGGCCTaGGCAGGCACATCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTARLRPA*AGTSPA
Trigger: GGCGGGGGATGTGCCTGCTCAGGCCGGGCGGAGTCT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTTCTGCGGCCAGACATaGCTGTCCCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSFCGQT*LSPLGS
Trigger: AGACCCCAGAGGGGACAGTCATGTCTGGCCGCAGAA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGGCCCTAGCTCACAGTaGGAAGCTTGGTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPGPSSQ*EAWSRE
Trigger: CTCCCTTGACCAAGCTTCTCACTGTGAGCTAGGGCC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561618.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAGGGCAGCGGAGAATaGAGGGCGCAAACACAATGG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPQGSGE*RAQTQW
Trigger: CCATTGTGTTTGCGCCCTGCATTCTCCGCTGCCCTG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCAGTACTCTCTCCTCCTaGTGCATAGCTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGSTLSS*CIAACC
Trigger: GCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACT...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTATCAGGTGTACCCCGTaGAGACTGAAGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPIRCTP*RLKAFR
Trigger: CCTGAAGGCCTTCAGTCTCCACGGGGTACACCTGAT...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCTATCAGCAGTCCCAATaGAGGCCTCAGACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGYQQSQ*RPQTQG
Trigger: CCCTTGAGTCTGAGGCCTCCATTGGGACTGCTGATA...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCGCTTTCGCAACTTGCTaGAAGGTTCAGACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCAFATC*KVQTCQ
Trigger: CTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGC...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACACATCCCCCTGTCCAGTaGCCCCTCATCTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTHPPVQ*PLICGK
Trigger: CTTCCCACAGATGAGGGGCCACTGGACAGGGGGATG...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGAGGCCTGACCCAGGCTaGGTGCAGGCCCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRRPDPG*VQALAH
Trigger: GTGAGCTAGGGCCTGCACCCAGCCTGGGTCAGGCCT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561618.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAAGACTCCGCCCGGCCTaGGCAGGCACATCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPRLRPA*AGTSPA
Trigger: GGCGGGGGATGTGCCTGCTCAGGCCGGGCGGAGTCT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTGGAGATTCACCCAGTaGATCACGCTGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGWRFTQ*ITLLKP
Trigger: AGGCTTGAGCAGCGTGATTCACTGGGTGAATCTCCA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAACCTGGCACGGGGCTaGGGAACCAGCAATCCCACT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKNLARG*GTSNPT
Trigger: AGTGGGATTGCTGGTTCCTCAGCCCCGTGCCAGGTT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACAACAGCCCACAGGCACTaGGGTGGGACTACAGAACCT +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTTAHRH*GGTTEP
Trigger: AGGTTCTGTAGTCCCACCTCAGTGCCTGTGGGCTGT...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCATGCCGGTGCAACTACTaGCTCCGCCGCCGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPCRCNY*LRRRLS
Trigger: CGAGAGGCGGCGGCGGAGGCAGTAGTTGCACCGGCA...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGGGCCGCCTCTGCCGGTaGAACTACTGCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVGRLCR*NYCLRR
Trigger: GCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCC...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCATCCTTCTGCACAGCTaGATCTCTGACTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRAILLHS*ISDLLL
Trigger: CAGAAGCAAGTCAGAGATGCAGCTGTGCAGAAGGAT...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGGTCAGTCTCCATGGCTaGCTCACTAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGVSLHG*LTSQGL
Trigger: GAGACCTTGACTAGTGAGGCAGCCATGGAGACTGAC...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCCCCAGCAGGCTTTCTaGTTCTGCAGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRPQQAF*FCRRPR
Trigger: CCTGGGCCTCCTGCAGAAGCAGAAAGCCTGCTGGGG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAACCCCAGCAGGCTTTCTaGTTCTGCAGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSEPQQAF*FCRRPR
Trigger: CCTGGGCCTCCTGCAGAAGCAGAAAGCCTGCTGGGG...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCCCCAGCAGGCTTTCTaGTTCTGCAGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEPQQAF*FCRRPR
Trigger: CCTGGGCCTCCTGCAGAAGCAGAAAGCCTGCTGGGG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTAAGTCCACACCACTCTaGCTTTGGGCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSKSTPL*LWALSC
Trigger: GCAGGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTT...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGAAGTCCACACCACTCTaGCTTTGGGCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRKSTPL*LWALSC
Trigger: GCAGGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTT...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTTTGGTCTGGCCCAATaGTCCTTCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSFGLAQ*SFHSQG
Trigger: GCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAA...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACAGCCAAGGCACAGCTaGCACCATCCCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPQPRHS*HHPQQA
Trigger: AGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCAGCCAAGGCACAGCTaGCACCATCCCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEQPRHS*HHPQQA
Trigger: AGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCCAAGTCTAACCTCTaGGGCTGGCCAATAACCACT +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGSKSNL*GWPITT
Trigger: AGTGGTTATTGGCCAGCCCCAGAGGTTAGACTTGGA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGACAGACTGTGCAACCTaGCACGGGGCTGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVETDCAT*HGAEEP
Trigger: TGGTTCCTCAGCCCCGTGCCAGGTTGCACAGTCTGT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CAA 72 bp CTGGGAATGTGTGCTGTGAGAAGAGTGCTCTGCATTTaGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LGMCAVRRVLCI*EYGLQMWSCPT
Trigger: AGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACACATTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CAA 72 bp CACAGCCCACAGGCACTGAGGTGGGACTACAGAACCTaGCTGGACCACATCTTTTCAGCACATTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: HSPQALRWDYRT*LDHIFSAHFCD
Trigger: GTCACAGAAATGTGCTGAAAAGATGTGGTCCAGCAAGGTTCTGTAGTCCCACCTCAGTGCCTGTGGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCAGAAAGTTTGTGCTTTaGGTCTTCCCAGAACCACTC +
Preference number: 4 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRARKFVL*VFPEPL
Trigger: GAGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCT...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCGGAGCACCTCTTGGTaGAGCAGATCTTGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSRSTSW*SRSCKC
Trigger: GCACTTACAAGATCTGCTTCACCAAGAGGTGCTCCG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGCGGAGCACCTCTTGGTaGAGCAGATCTTGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRRSTSW*SRSCKC
Trigger: GCACTTACAAGATCTGCTTCACCAAGAGGTGCTCCG...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTACACAGCAAGACCCTaGACCATCGCTGCAACAATA +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGYTARP*TIAATI
Trigger: TATTGTTGCAGCGATGGTTCAGGGTCTTGCTGTGTA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGTACCCCGTGGAGACTaGAGGCCTTCAGGCACCAAT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICVPRGD*RPSGTN
Trigger: ATTGGTGCCTGAAGGCCTTCAGTCTCCACGGGGTAC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTTTCAAAGAACACGGTaGCAGGTCGGTCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSFQRTR*QVGPLG
Trigger: CCCCAAAGGACCGACCTGTCACCGTGTTCTTTGAAA...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCTTGCTGCTGTTCTGTaGTGTCAGTCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLAAVL*CQSPWL
Trigger: CAGCCATGGAGACTGACATCACAGAACAGCAGCAAG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAATTCTGCGGCCAGACATaGCTGTCCCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSEFCGQT*LSPLGS
Trigger: AGACCCCAGAGGGGACAGTCATGTCTGGCCGCAGAA...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGACGCAGCCCCAAAGGTaGGATTTGTTTACCACTCTG +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGTQPQR*DLFTTL
Trigger: CAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGT...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTCTGGCCAATAACCACTaGGGCAGTGGCGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICLANNH*GSGVRF
Trigger: GAACCTCACGCCACTGCCTCAGTGGTTATTGGCCAG...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACACATGCAGAGGGCCAGTaGGAACAGATGGATGCAGAC +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTHAEGQ*EQMDAD
Trigger: GTCTGCATCCATCTGTTCTCACTGGCCCTCTGCATG...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCGGCATCACTTTGTGGTaGCATAACTTTACCATGCAG +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCGITLW*HNFTMQ
Trigger: CTGCATGGTAAAGTTATGTCACCACAAAGTGATGCC...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGGCCGCCTCTGCCGGTaGAACTACTGCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPGRLCR*NYCLRR
Trigger: GCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATTGCCACTTGATAGTCTaGTCTGGCGAATCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHCHLIV*SGESQF
Trigger: GAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCA...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCACAAAAGCATCCTTCTaGACAGCTGCATCTCTGACT +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCTKASF*TAASLT
Trigger: AGTCAGAGATGCAGCTGTGCAGAAGGATGCTTTTGT...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTACAAGCACATCTTCCTaGAAGTCCACACCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSTSTSS*KSTPLW
Trigger: CCAGAGTGGTGTGGACTTGCAGGAAGATGTGCTTGT...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCCTGGAATCACATCTGTaGCTGCAAAGAGTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGLESHL*LQRVAK
Trigger: TTTCGCCACTCTTTGCAGGCACAGATGTGATTCCAG...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTCCCAGTGAATCACGCTaGTCAAGCCTCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPPSESR*SSLIVF
Trigger: AAAGACGATGAGGCTTGAGCAGCGTGATTCACTGGG...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACAGGGCAGCGGAGAATaGAGGGCGCAAACACAATGG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKQGSGE*RAQTQW
Trigger: CCATTGTGTTTGCGCCCTGCATTCTCCGCTGCCCTG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGTCAGTCTCCATGGCTaGCTCACTAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPVSLHG*LTSQGL
Trigger: GAGACCTTGACTAGTGAGGCAGCCATGGAGACTGAC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACAACACCACTCTGGCTTTaGGCTCTCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTTPLWL*ALSCCL
Trigger: CAAGCAGCAGGAGAGAGCCCAAAGCCAGAGTGGTGT...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAGATCCTCCAAGGATCTaGGTCTCTCTCTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTDPPRI*VSLLQA
Trigger: TGCTTGTAAGAGAGAGACCCAGATCCTTGGAGGATC...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAGGCTACATTCAGCTaGGTGCCCATTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPQATFS*VPILSV
Trigger: GACAGACAGAATGGGCACCCAGCTGAATGTAGCCTG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTTTGTAGTGGGTCAGTaGTGTCAGGGCAGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPFVVGQ*CQGSGE
Trigger: TTCTCCGCTGCCCTGACACCACTGACCCACTACAAA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCTTTGGTCTGGCCCAATaGTCCTTCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVFGLAQ*SFHSQG
Trigger: GCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAA...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTTTGGTCTGGCCCAATaGTCCTTCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHFGLAQ*SFHSQG
Trigger: GCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTTTCAACACCCACCTTTaGGAAGGGAAAAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSFNTHL*EGKRGW
Trigger: CCACCCTCTTTTCCCTTCCCAAAGGTGGGTGTTGAA...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACACCACAGGCACTGAGGTaGGACTACAGAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTPQALR*DYRTLL
Trigger: CAGCAAGGTTCTGTAGTCCCACCTCAGTGCCTGTGG...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTCACAGCATCATTCGCTaGACTGGACAATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPHSIIR*TGQSVG
Trigger: TCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTG...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCAAAGTCTTTCTGTTaGGGCTGTGGAAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGSKSFC*GCGRKP
Trigger: GGGTTTTCTTCCACAGCCTCAACAGAAAGACTTTGA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCGTACCAAGACATCACTaGACCTTAAGGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGVPRHH*TLRAAF
Trigger: AAAAGCTGCCCTTAAGGTTCAGTGATGTCTTGGTAC...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCGCTGCCTCTCTAAGTaGGCACGCCAGGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETRCLSK*ARQEAW
Trigger: CCAAGCTTCCTGGCGTGCTCACTTAGAGAGGCAGCG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCCATCTGCGATCCTCTaGAGGAGAAATACCACCAAG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPPSAIL*RRNTTK
Trigger: CTTGGTGGTATTTCTCCTTCAGAGGATCGCAGATGG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTCTCATTTGAGGCACTaGGGGCATTGTCCCGTGAAT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPSHLRH*GHCPVN
Trigger: ATTCACGGGACAATGCCCTCAGTGCCTCAAATGAGA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACACTCTACTCTTTGCTTTaGCTGATAGGAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTLYSLL*LIGRWC
Trigger: GCACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAG...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTCCTTTGGGGGTAAGTaGGCAGAGGAACTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPSFGGK*AEELSF
Trigger: AAAAGACAGTTCCTCTGCTCACTTACCCCCAAAGGA...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATGCAATCCTGACTAGATaGAAGATGAGGCGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHAILTR*KMRRSS
Trigger: ACTGGAACGCCTCATCTTTCATCTAGTCAGGATTGC...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGGCCTCATTACCTaGGGCAGCTCGGTAGAATGG +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRQGLIT*GSSVEW
Trigger: CCATTCTACCGAGCTGCCTCAGGTAATGAGGCCCTG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACAGGGCCTCATTACCTaGGGCAGCTCGGTAGAATGG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPQGLIT*GSSVEW
Trigger: CCATTCTACCGAGCTGCCTCAGGTAATGAGGCCCTG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAGAGGCAACTACAACTaGCCCAAATCCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKRGNYN*PKSPGP
Trigger: AGGGCCTGGGGATTTGGGTCAGTTGTAGTTGCCTCT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTACCAGGGGACCAACATaGGACCTAATAGATCCATCT +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPTRGPT*DLIDPS
Trigger: AGATGGATCTATTAGGTCTCATGTTGGTCCCCTGGT...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTCTTCGACGGAAGCTaGCTTCCACCCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLFDGS*LPPSAP
Trigger: TGGGGCGGAGGGTGGAAGGCAGCTTCCGTCGAAGAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCTGCACTGATTCTTTTTaGGCTGAAGCATGGCATGAT +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCCTDSF*AEAWHD
Trigger: ATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCA...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCCTCCTGAAATCACGATaGACTGATTCTTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCLLKSR*TDSFCA
Trigger: AGCGCAAAAAGAATCAGTGCATCGTGATTTCAGGAG...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAAAAAGCTCGGAGAATTaGCCATCGGAAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTKSSEN*PSENSY
Trigger: GTAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTT...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTACCCTGAACCATCGCTaGAACAATATGATTCTGCGG +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPTLNHR*NNMILR
Trigger: CCGCAGAATCATATTGTTGCAGCGATGGTTCAGGGT...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCTGGGCTCTCTCCTGCTaGTTGTTTGGTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVWALSC*LFGDSF
Trigger: GAAGGAGTCACCAAACAAGCAGCAGGAGAGAGCCCA...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTTTGGGCTCTCTCCTaGTGCTTGTTTGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLWALS*CLFGDS
Trigger: GGAGTCACCAAACAAGCAGCAGGAGAGAGCCCAAAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCTACATTCAGCTGGGTaGCCATTCTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLHSAG*PFCLSW
Trigger: CCAAGACAGACAGAATGGGCACCCAGCTGAATGTAG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGATTCCTTCCGGCAACTaGCGGGCAGTTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEIPSGN*RAVLGS
Trigger: TGAGCCCAGAACTGCCCGGCAGTTGCCGGAAGGAAT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTGGAAGGTTCAGACTTaGCAGCTGTCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHWKVQT*QLSSGS
Trigger: GCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGCTGTTGGTTGGAGGTaGAGTCTGGGTCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSAVGWR*SLGPQF
Trigger: AAACTGTGGACCCAGACTGCACCTCCAACCAACAGC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGCCTTTTGTCTCTCTCTaGAAGGCTCATAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGPFVSL*KAHSWR
Trigger: CCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGG...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTATCTCTAAGCTCCTCTaGTGGACTGGGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSISKLL*WTGCWR
Trigger: TCTCCAACACCCAGTCCACCAGAGGAGCTTAGAGAT...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTACACCACTCTGGCTTTaGGCTCTCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICTPLWL*ALSCCL
Trigger: CAAGCAGCAGGAGAGAGCCCAAAGCCAGAGTGGTGT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATGATCCTCCAAGGATCTaGGTCTCTCTCTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDDPPRI*VSLLQA
Trigger: TGCTTGTAAGAGAGAGACCCAGATCCTTGGAGGATC...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAATCAGGTGTACCCCGTaGAGACTGAAGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKIRCTP*RLKAFR
Trigger: CCTGAAGGCCTTCAGTCTCCACGGGGTACACCTGAT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCCACAGGTTTCCATGCTaGTTCATCTTCTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCHRFPC*FIFFME
Trigger: CTCCATAAAGAAGATGAACCAGCATGGAAACCTGTG...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGGCGAAACCTCTGACTaGGTAGTAGGTTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPGETSD*VVGFTL
Trigger: CAGAGTGAAACCTACTACCCAGTCAGAGGTTTCGCC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATTGGAAACTGATGAGCTaGAATCACATCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDWKLMS*NHICAC
Trigger: GCAGGCACAGATGTGATTCCAGCTCATCAGTTTCCA...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGACTGCCGGGCAGTTCTaGGCTCAAAGGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKETAGQF*AQRRCW
Trigger: CCAACACCTCCTTTGAGCCCAGAACTGCCCGGCAGT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCCCTCTGGGGTCTCTTTaGTTTTCTGAGGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGPLGSL*FSEVSF
Trigger: AAAACTCACCTCAGAAAACCAAAGAGACCCCAGAGG...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCCTCTGGGGTCTCTTTaGTTTTCTGAGGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGPLGSL*FSEVSF
Trigger: AAAACTCACCTCAGAAAACCAAAGAGACCCCAGAGG...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTTCAACACCCACCTTTaGGAAGGGAAAAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPFNTHL*EGKRGW
Trigger: CCACCCTCTTTTCCCTTCCCAAAGGTGGGTGTTGAA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGCTGCATTTTGGAGTATaGGCTCCAAATGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGLHFGV*APNVEL
Trigger: CAGCTCCACATTTGGAGCCCATACTCCAAAATGCAG...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCACTACAGAACCTTGCTaGACCACATCTTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGTTEPC*TTSFQH
Trigger: GTGCTGAAAAGATGTGGTCCAGCAAGGTTCTGTAGT...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCTACCAAGGCCAGCATaGTATTGCAGGACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLPRPA*YCRTVL
Trigger: CAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCGAGCTTTCTTTTTATaGGCCGGTCTGGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPRAFFL*AGLATS
Trigger: AGAGGTTGCCAGACCGGCCCATAAAAAGAAAGCTCG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561618.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCACAGCATCATTCGCTaGACTGGACAATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPHSIIR*TGQSVG
Trigger: TCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATAGAACCACTCTCTCCTaGAATCACGATGCACTGATT +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHRTTLS*NHDALI
Trigger: AATCAGTGCATCGTGATTTCAGGAGAGAGTGGTTCT...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCTTCTCCTTCCACCGTaGAGCAATCCGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLLLPP*SNPAQS
Trigger: ACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCCATCTGCGATCCTCTaGAGGAGAAATACCACCAAG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHPSAIL*RRNTTK
Trigger: CTTGGTGGTATTTCTCCTTCAGAGGATCGCAGATGG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGTACCCCGTGGAGACTaGAGGCCTTCAGGCACCAAT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETVPRGD*RPSGTN
Trigger: ATTGGTGCCTGAAGGCCTTCAGTCTCCACGGGGTAC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGAGGGCATTGTCCCGTaGATCAAATTTTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPEGIVP*IKFWTA
Trigger: AGCAGTCCAAAATTTGATTCACGGGACAATGCCCTC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTCTTTTCCTGAGCAGTaGTACCTTCTAGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPSFPEQ*YLLVSL
Trigger: CAGGGAAACTAGAAGGTATCACTGCTCAGGAAAAGA...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTGCTTTTCAATTGTCTTaGAGGCTTTGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSAFQLS*RLCAPS
Trigger: AGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGC...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCCTCATCTTAGCTCTCTaGGGTCTTATATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCLILAL*GLISES
Trigger: AGATTCAGATATAAGACCTCAGAGAGCTAAGATGAG...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATGTGGCTTTAAAGATGTaGCCATTGTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHVALKM*PLCSST
Trigger: GGTGGAAGAACACAATGGTCACATCTTTAAAGCCAC...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGGCGTTCCAGTGTATTaGGATGAGTTCGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSGVPVY*DEFGRV
Trigger: AACTCTCCCGAACTCATCTCAATACACTGGAACGCC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCCTCTGCTGATGAACTaGGGCTTGTCTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVPLLMN*GLSSRN
Trigger: ATTCCTGGAAGACAAGCCTCAGTTCATCAGCAGAGG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAATTCTGCGGCCAGACATaGCTGTCCCCTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKFCGQT*LSPLGS
Trigger: AGACCCCAGAGGGGACAGTCATGTCTGGCCGCAGAA...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCAGAGGCAACTACAACTaGCCCAAATCCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASRGNYN*PKSPGP
Trigger: AGGGCCTGGGGATTTGGGTCAGTTGTAGTTGCCTCT...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCTCCTCAGGACAAGATaGACAAGGTGGCAGATGTCT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLLRTR*TRWQMS
Trigger: AGACATCTGCCACCTTGTTCATCTTGTCCTGAGGAG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCAAGTGCTTGTTACAGTaGAAAACACAGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPKCLLQ*KTQPTG
Trigger: GCCTGTGGGCTGTGTTTTTCACTGTAACAAGCACTT...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACTCTTCGACGGAAGCTaGCTTCCACCCTCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTLFDGS*LPPSAP
Trigger: TGGGGCGGAGGGTGGAAGGCAGCTTCCGTCGAAGAG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTCCCGTTCCATCATCCTaGGACGTTCTTCTGTTACCC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICPVPSS*DVLLLP
Trigger: GGGTAACAGAAGAACGTCGCAGGATGATGGAACGGG...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACATGCCACTTGATAGTCTaGTCTGGCGAATCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTCHLIV*SGESQF
Trigger: GAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCA...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTAAGTGCTGTCGTTCCTaGTCCTTTAGAAAGACCATG +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSKCCRS*SFRKTM
Trigger: CATGGTCTTTCTAAAGGAGCAGGAACGACAGCACTT...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAGATGGAGGAAATGCTaGCTACACAGCAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSRWRKC*LHSKTL
Trigger: CAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTGGGCTCTCTCCTGCTaGTTGTTTGGTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICWALSC*LFGDSF
Trigger: GAAGGAGTCACCAAACAAGCAGCAGGAGAGAGCCCA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACTTTGGGCTCTCTCCTaGTGCTTGTTTGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKLWALS*CLFGDS
Trigger: GGAGTCACCAAACAAGCAGCAGGAGAGAGCCCAAAG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACACTTTGGGCTCTCTCCTaGTGCTTGTTTGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTLWALS*CLFGDS
Trigger: GGAGTCACCAAACAAGCAGCAGGAGAGAGCCCAAAG...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCACAAGCACATCTTCCTaGAAGTCCACACCACTCTGG +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSTSTSS*KSTPLW
Trigger: CCAGAGTGGTGTGGACTTGCAGGAAGATGTGCTTGT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGATTCCTTCCGGCAACTaGCGGGCAGTTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETIPSGN*RAVLGS
Trigger: TGAGCCCAGAACTGCCCGGCAGTTGCCGGAAGGAAT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAGTGAATCACGCTaGTCAAGCCTCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSPSESR*SSLIVF
Trigger: AAAGACGATGAGGCTTGAGCAGCGTGATTCACTGGG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGTCAGTCTCCATGGCTaGCTCACTAGTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICVSLHG*LTSQGL
Trigger: GAGACCTTGACTAGTGAGGCAGCCATGGAGACTGAC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTGCATAGCTGCTTGCTaGTGTTCTGTGATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPCIAAC*CSVMSV
Trigger: GACTGACATCACAGAACAGCAGCAAGCAGCTATGCA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAGTACTCTCTCCTCCTaGTGCATAGCTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKSTLSS*CIAACC
Trigger: GCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTAGTACTCTCTCCTCCTaGTGCATAGCTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSTLSS*CIAACC
Trigger: GCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGTTGCTTTCGCAACTTaGTGGAAGGTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPVAFAT*WKVQTC
Trigger: GCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAAC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGCTGTTGGTTGGAGGTaGAGTCTGGGTCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICAVGWR*SLGPQF
Trigger: AAACTGTGGACCCAGACTGCACCTCCAACCAACAGC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTTGCCACTCAGAATTATaGTCCAAGTCTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSCHSEL*SKSNLW
Trigger: CCAGAGGTTAGACTTGGAGCATAATTCTGAGTGGCA...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCCTGCTACCTTTAGCTaGCACTCAGAATTATGCTCC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPPATFS*HSELCS
Trigger: GGAGCATAATTCTGAGTGGCAGCTAAAGGTAGCAGG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTGACATAACTTTACCATaGAGAGGGCCAGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSDITLP*RGPVRT
Trigger: TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTC...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGCCCCACTGCTGCCATaGAGAGATCAAACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHAPLLP*RDQTSK
Trigger: TTTGCTTGTTTGATCTCTGCATGGCAGCAGTGGGGC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTTCCAGCAGGGTAAGTaGTCTGGCAGGTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHFQQGK*SGRFPK
Trigger: CTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCATACAGAATGATGCATaGCCCGCATCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSIQNDA*PASSFP
Trigger: TGGGAAGCTGGATGCGGGGCATGCATCATTCTGTAT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCTCTGTCTTCGTGTCTTaGGAAGAAATCCTACCATTT +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCSVFVS*EEILPF
Trigger: AAATGGTAGGATTTCTTCCCAAGACACGAAGACAGA...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCAGGCTCCATCACGGCTaGAAATTCGATGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGRLHHG*KFDVRI
Trigger: AATTCTTACATCGAATTTCCAGCCGTGATGGAGCCT...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCAAGAGCTACAATGTCTaGGCGCATATGATCTGTATT +
Preference number: 4 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRAKSYNV*AHMICI
Trigger: AATACAGATCATATGCGCCCAGACATTGTAGCTCTT...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTGGTGGACTGGGTGTTaGAGAAAGCTAAAACTATCC +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPWWTGC*RKLKLS
Trigger: GGATAGTTTTAGCTTTCTCCAACACCCAGTCCACCA...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACACTTGATAGTCTGCTCTaGCGAATCCCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTLDSLL*RIPVLP
Trigger: TGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAG...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAGAAGTACATGGAAGTaGCTCACAAAATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCRSTWK*LTKSWK
Trigger: TTTCCAGGATTTTGTGAGCCACTTCCATGTACTTCT...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGCGGGGAAGAAGTACATaGAAGTGGCTCACAAAATCC +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRRGRST*KWLTKS
Trigger: GGATTTTGTGAGCCACTTCCATGTACTTCTTCCCCG...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTGATGCTTGTCTCAGATaGAGGAAATGCTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSDACLR*RKCCLH
Trigger: GTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATC...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGCACGCCAGGAAGCTTaGAGAAGAGCAGCTGCACTA +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQARQEA*RRAAAL
Trigger: TAGTGCAGCTGCTCTTCTCCAAGCTTCCTGGCGTGC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCACGCCAGGAAGCTTaGAGAAGAGCAGCTGCACTA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAARQEA*RRAAAL
Trigger: TAGTGCAGCTGCTCTTCTCCAAGCTTCCTGGCGTGC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTCTCTCCATTTCTGCTaGATAACGATGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSLHFC*ITMAAA
Trigger: GGCTGCAGCCATCGTTATCCAGCAGAAATGGAGAGA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAAGTCCACACCACTCTaGCTTTGGGCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEKSTPL*LWALSC
Trigger: GCAGGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACAGGCTACATTCAGCTaGGTGCCCATTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKQATFS*VPILSV
Trigger: GACAGACAGAATGGGCACCCAGCTGAATGTAGCCTG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTGGAAACTGATGAGCTaGAATCACATCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPWKLMS*NHICAC
Trigger: GCAGGCACAGATGTGATTCCAGCTCATCAGTTTCCA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTCTTGCGCTTAGCCTTTaGAGAAGGTTCTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPLALSL*RRFFVL
Trigger: GAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAG...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATTTGTAGTGGGTCAGTaGTGTCAGGGCAGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKFVVGQ*CQGSGE
Trigger: TTCTCCGCTGCCCTGACACCACTGACCCACTACAAA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCGAATCAGTGACAACCTaGTCTTTGCCTTATTCTCAG +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGESVTT*SLPYSQ
Trigger: CTGAGAATAAGGCAAAGACCAGGTTGTCACTGATTC...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATATCAGCAGTCCCAATaGAGGCCTCAGACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKYQQSQ*RPQTQG
Trigger: CCCTTGAGTCTGAGGCCTCCATTGGGACTGCTGATA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGCTTTCGCAACTTGCTaGAAGGTTCAGACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSAFATC*KVQTCQ
Trigger: CTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATTTGGTCTGGCCCAATaGTCCTTCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAFGLAQ*SFHSQG
Trigger: GCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGCATGACTGTCCCCTCTaGGGTCTCTTTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEHDCPL*GLFGFL
Trigger: CAGAAAACCAAAGAGACCCCAGAGGGGACAGTCATG...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCCAACCCAGGGACGAATaGCTCTCATCCCCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLQPRDE*LSSPCP
Trigger: TGGACAGGGGGATGAGAGCCATTCGTCCCTGGGTTG...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGCCAGTGAGAACAGATaGATGCAGACACAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHASENR*MQTQRL
Trigger: CAAACGCTGTGTCTGCATCCATCTGTTCTCACTGGC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTAATTCAGGTTTTGTTTaGGGCTGGGAATGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPNSGFV*GWECVL
Trigger: CAGCACACATTCCCAGCCCCAAACAAAACCTGAATT...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTTTATGGGCCGGTCTaGCAACCTCTCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICFYGPV*QPLFGL
Trigger: CAGGCCAAAGAGAGGTTGCCAGACCGGCCCATAAAA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561618.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCATCCCAGCTCTGTCTaGGGGGTTTCTTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHHPSSV*GVSLLS
Trigger: AGATAACAAAGAAACCCCTCAGACAGAGCTGGGATG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACGCTGCCTCTCTAAGTaGGCACGCCAGGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTRCLSK*ARQEAW
Trigger: CCAAGCTTCCTGGCGTGCTCACTTAGAGAGGCAGCG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAGTTCCAAGCTTCCTTaGGAGCTCTCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSSKLP*ELSLSG
Trigger: ACCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTCTCCTTCATCTGAAATaGCAGACTCTAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSLLHLK*QTLVCS
Trigger: AGAGCAAACTAGAGTCTGTCATTTCAGATGAAGGAG...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCTCATTTGAGGCACTaGGGGCATTGTCCCGTGAAT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSHLRH*GHCPVN
Trigger: ATTCACGGGACAATGCCCTCAGTGCCTCAAATGAGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCTCTACTCTTTGCTTTaGCTGATAGGAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLYSLL*LIGRWC
Trigger: GCACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTTGAGGTATTTAAGCTaGGGAGAGAGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLRYLS*GERMAS
Trigger: AGAGGCCATCCTCTCTCCTCAGCTTAAATACCTCAA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTTCAAAGAACACGGTaGCAGGTCGGTCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPFQRTR*QVGPLG
Trigger: CCCCAAAGGACCGACCTGTCACCGTGTTCTTTGAAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTTTCAAAGAACACGGTaGCAGGTCGGTCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEFQRTR*QVGPLG
Trigger: CCCCAAAGGACCGACCTGTCACCGTGTTCTTTGAAA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTTAAGGCTTCTTTGCTaGCAAGGGGAATACTCATAT +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGLRLLC*QGEYSY
Trigger: ATATGAGTATTCCCCTTGTCAGCAAAGAAGCCTTAA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGAGTGGCGAAACCTCTaGCTGGGTAGTAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPEWRNL*LGSRFH
Trigger: GTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTAAAGGAGGTGTTGGGTaGTATGCAGCTAATTCATCT +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSKGGVG*YAANSS
Trigger: AGATGAATTAGCTGCATATCACCCAACACCTCCTTT...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGTGGCTTTAAAGATGTaGCCATTGTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPVALKM*PLCSST
Trigger: GGTGGAAGAACACAATGGTCACATCTTTAAAGCCAC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCTTGCTGCTGTTCTGTaGTGTCAGTCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELAAVL*CQSPWL
Trigger: CAGCCATGGAGACTGACATCACAGAACAGCAGCAAG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCTGGTCCCATGAGATaGTGCCGTGTTAGACAGACA +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSGPMR*CRVRQT
Trigger: TGTCTGTCTAACACGGCATCATCTCATGGGACCAGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAGAGGCAACTACAACTaGCCCAAATCCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETRGNYN*PKSPGP
Trigger: AGGGCCTGGGGATTTGGGTCAGTTGTAGTTGCCTCT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTTCAAATGTCAGAAATaGGAGGGTCCCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHFKCQK*EGPSGQ
Trigger: CTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACATCTAACACACCATGCTaGGGGGTTTTCCTCTATCCT +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTSNTPC*GVFLYP
Trigger: AGGATAGAGGAAAACCCCTCAGCATGGTGTGTTAGA...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTGGTGCAACTTTTATATaGCCTCAGAGGGCTGATAAA +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPGATFI*PQRADK
Trigger: TTTATCAGCCCTCTGAGGTCATATAAAAGTTGCACC...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCACTGTCACAGCCTCTaGCAACTTGTATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPHCHSL*QLVWQN
Trigger: ATTTTGCCATACAAGTTGGCAGAGGCTGTGACAGTG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTCATTTAGAGCATTCATaGCCTGGAGATCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LALLSLSARLIVGGLYLPHLEHS*PGDQKE
Trigger: CTCTTTCTGATCTCCAGGGCATGAATGCTCTAAATG...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTAGATGGAGGAAATGCTaGCTACACAGCAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICRWRKC*LHSKTL
Trigger: CAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCTAAAATATCTGTTTaGTGGCGAATCTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRASKISV*WRICSI
Trigger: GATGGAACAGATTCGCCAGCAAACAGATATTTTAGA...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAGCCTTCTGTCTCACTaGCAACTTGGTAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSLLSH*QLGNLS
Trigger: GGAGAGATTACCAAGTTGGCAGTGAGACAGAAGGCT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTGGAATCACATCTGTaGCTGCAAAGAGTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLESHL*LQRVAK
Trigger: TTTCGCCACTCTTTGCAGGCACAGATGTGATTCCAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACACCCAGTGAATCACGCTaGTCAAGCCTCATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTPSESR*SSLIVF
Trigger: AAAGACGATGAGGCTTGAGCAGCGTGATTCACTGGG...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTGCATAGCTGCTTGCTaGTGTTCTGTGATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHCIAAC*CSVMSV
Trigger: GACTGACATCACAGAACAGCAGCAAGCAGCTATGCA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAGTACTCTCTCCTCCTaGTGCATAGCTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEASTLSS*CIAACC
Trigger: GCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGTTGCTTTCGCAACTTaGTGGAAGGTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHVAFAT*WKVQTC
Trigger: GCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAAC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACATGCTGCTTTTTAAGTTaGTTTCGCAACTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTCCFLS*FRNLLE
Trigger: TTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCA...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTGTTGGTTGGAGGTaGAGTCTGGGTCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAAVGWR*SLGPQF
Trigger: AAACTGTGGACCCAGACTGCACCTCCAACCAACAGC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGAGCTGCCCCACTGCTaGCATGCAGAGATCAAACAA +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRELPHC*HAEIKQ
Trigger: TTGTTTGATCTCTGCATGGCAGCAGTGGGGCAGCTC...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGTGAGAAGAGTGCTCTaGATTTTGGAGTATGGGCTC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSVRRVL*ILEYGL
Trigger: GAGCCCATACTCCAAAATGCAGAGCACTCTTCTCAC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATCATCATTCGCTGAACTaGACAATCTGTTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHHHSLN*TICWIE
Trigger: CTCAATCCAACAGATTGTCCAGTTCAGCGAATGATG...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTTTTGCGCTGAAGCATaGCATGATAAGCTACATCAG +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGFCAEA*HDKLHQ
Trigger: CTGATGTAGCTTATCATGCCATGCTTCAGCGCAAAA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATCAGAAAGAGGTGTTCTaGGATTTTTCCGGGTTATAC +
Preference number: 4 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDQKEVF*DFSGLY
Trigger: GTATAACCCGGAAAAATCCCAGAACACCTCTTTCTG...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACTTGATAGTCTGCTCTaGCGAATCCCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKLDSLL*RIPVLP
Trigger: TGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATCCTGGAAAGAATATTTaGAGCTGTATCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHPGKNI*SCILIG
Trigger: GCCAATCAGGATACAGCTCCAAATATTCTTTCCAGG...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCTGGCTCACAAAATCCTaGAAAGAATATTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGWLTKS*KEYLEL
Trigger: CAGCTCCAAATATTCTTTCCAGGATTTTGTGAGCCA...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATCTCTCCATTTCTGCTaGATAACGATGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKSLHFC*ITMAAA
Trigger: GGCTGCAGCCATCGTTATCCAGCAGAAATGGAGAGA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGCTGAGGAGAGAGGATaGCCTCTCTACTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICAEERG*PLYSLL
Trigger: AAGCAAAGAGTAGAGAGGCCATCCTCTCTCCTCAGC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTTTGTAGTGGGTCAGTaGTGTCAGGGCAGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEFVVGQ*CQGSGE
Trigger: TTCTCCGCTGCCCTGACACCACTGACCCACTACAAA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTTGTAGTGGGTCAGTaGTGTCAGGGCAGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPFVVGQ*CQGSGE
Trigger: TTCTCCGCTGCCCTGACACCACTGACCCACTACAAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTACAACAGGAGACGATaGACCTGGATAGTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHYNRRR*TWIVSS
Trigger: CGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATATCAGCAGTCCCAATaGAGGCCTCAGACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAYQQSQ*RPQTQG
Trigger: CCCTTGAGTCTGAGGCCTCCATTGGGACTGCTGATA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTATCAGCAGTCCCAATaGAGGCCTCAGACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEYQQSQ*RPQTQG
Trigger: CCCTTGAGTCTGAGGCCTCCATTGGGACTGCTGATA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATGGCAGCTCGGTAGAATaGAGATTTGGAATAAATCTG +
Preference number: 4 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDGSSVE*RFGINL
Trigger: CAGATTTATTCCAAATCTCCATTCTACCGAGCTGCC...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTGTCTTCCAGGAATTTaGTCTGGCCCAATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSCLPGI*SGPMVL
Trigger: AAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTGCAAGGCTCATAGTTaGAGGGCTGTATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHCKAHS*RAVSPF
Trigger: AAAGGGAGATACAGCCCTCCAACTATGAGCCTTGCA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CAA 72 bp GGAGTTGTCACAAGAGTATGGGTGGACATAACACATTaGTCCATACAGAATGATGCATGCCCCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GVVTRVWVDITH*SIQNDACPASS
Trigger: GCTGGATGCGGGGCATGCATCATTCTGTATGGACAAATGTGTTATGTCCACCCATACTCTTGTGACAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGGTAGATTGTCCCTTCTaGAATAGCCCCAGGATATAT +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRVDCPF*NSPRIY
Trigger: ATATATCCTGGGGCTATTTCAGAAGGGACAATCTAC...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCTGGCAAATCCTTTCTaGCTGAGAGCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLANPF*LRAVRW
Trigger: CCACCTTACTGCTCTCAGTCAGAAAGGATTTGCCAG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCCTGGCAAATCCTTTCTaGCTGAGAGCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASLANPF*LRAVRW
Trigger: CCACCTTACTGCTCTCAGTCAGAAAGGATTTGCCAG...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp TCTCAAATCTTCTCCTTCCACCGTGAAGCAATCCGGCTCAGAGTCATAGCAATACTGGCAAATCCTTTCTaGCTGAGAGCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SQIFSFHREAIRLRVIAILANPF*LRAVRW
Trigger: CCACCTTACTGCTCTCAGTCAGAAAGGATTTGCCAG...TATTGCTATGACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAGATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACTTCTCCTTCCACCGTaGAGCAATCCGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLLLPP*SNPAQS
Trigger: ACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTTCTCCTTCCACCGTaGAGCAATCCGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLLLPP*SNPAQS
Trigger: ACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp CATGATAGTTCCGTTCATTATGCTCCTGATAAACGAGTCTGGACTTCTCCAGTACTTCTCCTTCCACCGTaGAGCAATCCGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HDSSVHYAPDKRVWTSPVLLLPP*SNPAQS
Trigger: ACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAG...TACTGGAGAAGTCCAGACTCGTTTATCAGGAGCATAATGAACGGAACTATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTATCGCTGCAACAATATaGTTCTGCGGAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICIAATI*FCGAPL
Trigger: AAGAGGTGCTCCGCAGAATCATATTGTTGCAGCGAT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACTTCAAGCAGTCCACTaGACTTTCACGGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKLQAVH*TFTANS
Trigger: CGAATTAGCCGTGAAAGTTCAGTGGACTGCTTGAAG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGACTGCTAGTCTCATTTaGGGCACTGAGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKETASLI*GTEGIV
Trigger: GACAATGCCCTCAGTGCCTCAAATGAGACTAGCAGT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGACTGCTAGTCTCATTTaGGGCACTGAGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQTASLI*GTEGIV
Trigger: GACAATGCCCTCAGTGCCTCAAATGAGACTAGCAGT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATGTAGACTATTTGAAATaGAGGAGTCTTTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHVDYLK*RSLSAV
Trigger: CACAGCTGAAAGACTCCTTCATTTCAAATAGTCTAC...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTCTTTTCCTGAGCAGTaGTACCTTCTAGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSFPEQ*YLLVSL
Trigger: CAGGGAAACTAGAAGGTATCACTGCTCAGGAAAAGA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGCTTTTCAATTGTCTTaGAGGCTTTGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHAFQLS*RLCAPS
Trigger: AGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCTCTACTCTTTGCTTTaGCTGATAGGAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLYSLL*LIGRWC
Trigger: GCACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCCTTTGGGGGTAAGTaGGCAGAGGAACTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSFGGK*AEELSF
Trigger: AAAAGACAGTTCCTCTGCTCACTTACCCCCAAAGGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTGGAGATTCACCCAGTaGATCACGCTGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETWRFTQ*ITLLKP
Trigger: AGGCTTGAGCAGCGTGATTCACTGGGTGAATCTCCA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTTGGAGATTCACCCAGTaGATCACGCTGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLWRFTQ*ITLLKP
Trigger: AGGCTTGAGCAGCGTGATTCACTGGGTGAATCTCCA...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGCGTTCCAGTGTATTaGGATGAGTTCGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEGVPVY*DEFGRV
Trigger: AACTCTCCCGAACTCATCTCAATACACTGGAACGCC...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGGCGTTCCAGTGTATTaGGATGAGTTCGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRGVPVY*DEFGRV
Trigger: AACTCTCCCGAACTCATCTCAATACACTGGAACGCC...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTCTGGTCCCATGAGATaGTGCCGTGTTAGACAGACA +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRSGPMR*CRVRQT
Trigger: TGTCTGTCTAACACGGCATCATCTCATGGGACCAGA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTAGTTTTCTGGTCCCATaGGATGATGCCGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSFLVP*DDAVLD
Trigger: GTCTAACACGGCATCATCTCATGGGACCAGAAAACT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCCTCTGCTGATGAACTaGGGCTTGTCTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRPLLMN*GLSSRN
Trigger: ATTCCTGGAAGACAAGCCTCAGTTCATCAGCAGAGG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACCTCTGCTGATGAACTaGGGCTTGTCTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAPLLMN*GLSSRN
Trigger: ATTCCTGGAAGACAAGCCTCAGTTCATCAGCAGAGG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAAGAGGCAACTACAACTaGCCCAAATCCCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKRGNYN*PKSPGP
Trigger: AGGGCCTGGGGATTTGGGTCAGTTGTAGTTGCCTCT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATCTCTGGCTCAATTCTaGACCCAAAGTAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPSLAQF*TQSRER
Trigger: CCTCTCCCTACTTTGGGTTCAGAATTGAGCCAGAGA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATATGGCTTCATCTCTTaGTCAGGCCAACAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKYGFIS*SGQQGL
Trigger: TAGGCCTTGTTGGCCTGATCAAGAGATGAAGCCATA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGCACAGCGTTTGGTTCTaGAGGTTTTTAAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGHSVWF*RFLRVM
Trigger: CATAACTCTTAAAAACCTTCAGAACCAAACGCTGTG...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTTTGTCCATACAGAATaGTGCATGCCCCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEFVHTE*CMPRIQ
Trigger: CTGGATGCGGGGCATGCATCATTCTGTATGGACAAA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGTGCACTGATTCTTTTTaGGCTGAAGCATGGCATGAT +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRCTDSF*AEAWHD
Trigger: ATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCA...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGATCTTCACTTGCTCCTaGCAGGAGGTAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRIFTCS*QEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGAAAAGCTCGGAGAATTaGCCATCGGAAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEKSSEN*PSENSY
Trigger: GTAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAGTGTTTCCATTAGCTTaGTTAATGATGCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTVFPLA*LMMPET
Trigger: AGTTTCAGGCATCATTAAGCAAGCTAATGGAAACAC...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAGCAGATCTTGTAAGTaGTGTCGTTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSRSCK*CRSCSF
Trigger: AAAGGAGCAGGAACGACAGCACTTACAAGATCTGCT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCTCAGATGGAGGAAATaGTGCCTACACAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELRWRK*CLHSKT
Trigger: GGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCTGGGCTCTCTCCTGCTaGTTGTTTGGTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLWALSC*LFGDSF
Trigger: GAAGGAGTCACCAAACAAGCAGCAGGAGAGAGCCCA...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCTAAAATATCTGTTTaGTGGCGAATCTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGSKISV*WRICSI
Trigger: GATGGAACAGATTCGCCAGCAAACAGATATTTTAGA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTACATTCAGCTGGGTaGCCATTCTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLHSAG*PFCLSW
Trigger: CCAAGACAGACAGAATGGGCACCCAGCTGAATGTAG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTACATTCAGCTGGGTaGCCATTCTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLHSAG*PFCLSW
Trigger: CCAAGACAGACAGAATGGGCACCCAGCTGAATGTAG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAATTCCTTCCGGCAACTaGCGGGCAGTTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAIPSGN*RAVLGS
Trigger: TGAGCCCAGAACTGCCCGGCAGTTGCCGGAAGGAAT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR GCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACATGGACAGAGTCATTTTaGCAATGCATAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTWTESF*QCIESK
Trigger: TTTGGATTCTATGCATTGGCAAAATGACTCTGTCCA...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACACTAGTGTATCCTTCTTaGTGTCTTCATTATCTAGGT +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTLVYPS*CLHYLG
Trigger: ACCTAGATAATGAAGACAGCAAGAAGGATACACTAG...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCATACTTGCATAATTTaGAAACAGAGGCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSHTCII*KQRLGP
Trigger: TGGACCGAGCCTCTGTTTGCAAATTATGCAAGTATG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCATACTTGCATAATTTaGAAACAGAGGCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPHTCII*KQRLGP
Trigger: TGGACCGAGCCTCTGTTTGCAAATTATGCAAGTATG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTGCATAGCTGCTTGCTaGTGTTCTGTGATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICCIAAC*CSVMSV
Trigger: GACTGACATCACAGAACAGCAGCAAGCAGCTATGCA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACATGTAGGTTCTCAATCTaGTCAGTCAGTACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTCRFSI*SVSTLS
Trigger: GGAGAGAGTACTGACTGAGCAGATTGAGAACCTACA...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCTGGAAGGTTCAGACTTaGCAGCTGTCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFWKVQT*QLSSGS
Trigger: GCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCA...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTGGAAGGTTCAGACTTaGCAGCTGTCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETWKVQT*QLSSGS
Trigger: GCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTGCTTTCGCAACTTaGTGGAAGGTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTVAFAT*WKVQTC
Trigger: GCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAAC...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSTVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCATGAACAGGCTCATATaGGGTTTTCGGTTTAATCTA +
Preference number: 4 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGMNRLI*GFRFNL
Trigger: TAGATTAAACCGAAAACCGCATATGAGCCTGTTCAT...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGGTATTGCAGGACAGTaGTGGGGAGTTGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQGIAGQ*WGVVTR
Trigger: TCTTGTGACAACTCCCCAGCACTGTCCTGCAATACC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACATTTCTGTTGAGGCTGTaGAAGAAAACCCCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTFLLRL*KKTPFH
Trigger: ATGGAACGGGGTTTTCTTCCACAGCCTCAACAGAAA...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACATCCTACCATTTCCATaGCAAGTTGTAGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHILPFP*QVVGAQ
Trigger: TTGAGCGCCTACAACTTGCCATGGAAATGGTAGGAT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATGATTACAGATATCAATaGAGTCATCCCGGTATGTCT +
Preference number: 4 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDDYRYQ*SHPGMS
Trigger: AGACATACCGGGATGACTCCATTGATATCTGTAATC...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGATCTCTAAGCTCCTCTaGTGGACTGGGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRISKLL*WTGCWR
Trigger: TCTCCAACACCCAGTCCACCAGAGGAGCTTAGAGAT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCCTCGTGAGAATTCCATaGGCTCTCTCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASLVRIP*ALSRSL
Trigger: CAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAG...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGAGCTGTATCCTGATTaGCGAATTCGAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSELYPD*RIRTVS
Trigger: GGAAACAGTTCGAATTCGCCAATCAGGATACAGCTC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAACACCACTCTGGCTTTaGGCTCTCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKTPLWL*ALSCCL
Trigger: CAAGCAGCAGGAGAGAGCCCAAAGCCAGAGTGGTGT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAAAAATATCTGTTTGCTaGCGAATCTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTKISVC*RICSII
Trigger: GATGATGGAACAGATTCGCCAGCAAACAGATATTTT...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGCTGAGGAGAGAGGATaGCCTCTCTACTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPAEERG*PLYSLL
Trigger: AAGCAAAGAGTAGAGAGGCCATCCTCTCTCCTCAGC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGCGAAACCTCTGACTaGGTAGTAGGTTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAGETSD*VVGFTL
Trigger: CAGAGTGAAACCTACTACCCAGTCAGAGGTTTCGCC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTGGAAACTGATGAGCTaGAATCACATCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICWKLMS*NHICAC
Trigger: GCAGGCACAGATGTGATTCCAGCTCATCAGTTTCCA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAACTGCCGGGCAGTTCTaGGCTCAAAGGAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTATAGQF*AQRRCW
Trigger: CCAACACCTCCTTTGAGCCCAGAACTGCCCGGCAGT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTTGCGCTTAGCCTTTaGAGAAGGTTCTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLALSL*RRFFVL
Trigger: GAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTTTTTGGCACCTTTGTaGCTGTGCAATCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSFLAPL*LCNLKS
Trigger: AGACTTCAGATTGCACAGCCACAAAGGTGCCAAAAA...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTAGGAGACGATGGACCTaGATAGTTTCCTCGACGAAT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICRRRWT*IVSSTN
Trigger: ATTCGTCGAGGAAACTATCCAGGTCCATCGTCTCCT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGGGCAGCTCGGTAGAATaGAGATTTGGAATAAATCTG +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRGSSVE*RFGINL
Trigger: CAGATTTATTCCAAATCTCCATTCTACCGAGCTGCC...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATGTCTTCCAGGAATTTaGTCTGGCCCAATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKCLPGI*SGPMVL
Trigger: AAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCCTCTGGGGTCTCTTTaGTTTTCTGAGGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHPLGSL*FSEVSF
Trigger: AAAACTCACCTCAGAAAACCAAAGAGACCCCAGAGG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCATGACTGTCCCCTCTaGGGTCTCTTTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEHDCPL*GLFGFL
Trigger: CAGAAAACCAAAGAGACCCCAGAGGGGACAGTCATG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACATGACTGTCCCCTCTaGGGTCTCTTTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPHDCPL*GLFGFL
Trigger: CAGAAAACCAAAGAGACCCCAGAGGGGACAGTCATG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGAACATGAGAACAGTATaGCTACTGACACTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVENMRTV*LLTLQP
Trigger: GGGCTGAAGTGTCAGTAGCCATACTGTTCTCATGTT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGGAATTTTATCCAAACTaGAGTTTCAGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGEFYPN*SFRSLR
Trigger: TCTCAGGGACCTGAAACTCCAGTTTGGATAAAATTC...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAATTGCAGGACAGTGCTaGGGAGTTGTCACAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKIAGQC*GVVTRV
Trigger: TACTCTTGTGACAACTCCCCAGCACTGTCCTGCAAT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCAAAGTCTTTCTGTTaGGGCTGTGGAAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSKSFC*GCGRKP
Trigger: GGGTTTTCTTCCACAGCCTCAACAGAAAGACTTTGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACACTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTLKMEC*SLIFTC
Trigger: GCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAG...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLKMEC*SLIFTC
Trigger: GCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTTGTCTAGCAATGTTTaGTTTGTAGCCTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLSSNV*FVACGK
Trigger: CTTTCCACAGGCTACAAATCAAACATTGCTAGACAA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTTGCTTAATGATGCCTaGAACTGGGCACTGATGCTG +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLLNDA*NWALML
Trigger: CAGCATCAGTGCCCAGTTTCAGGCATCATTAAGCAA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTTGCTTAATGATGCCTaGAACTGGGCACTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASLLNDA*NWALML
Trigger: CAGCATCAGTGCCCAGTTTCAGGCATCATTAAGCAA...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGTACCAAGACATCACTaGACCTTAAGGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKVPRHH*TLRAAF
Trigger: AAAAGCTGCCCTTAAGGTTCAGTGATGTCTTGGTAC...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAATCGCTGCAACAATATaGTTCTGCGGAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAIAATI*FCGAPL
Trigger: AAGAGGTGCTCCGCAGAATCATATTGTTGCAGCGAT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCTTCAAGCAGTCCACTaGACTTTCACGGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELQAVH*TFTANS
Trigger: CGAATTAGCCGTGAAAGTTCAGTGGACTGCTTGAAG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAAGTTCCAAGCTTCCTTaGGAGCTCTCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPSSKLP*ELSLSG
Trigger: ACCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCTCCTTCATCTGAAATaGCAGACTCTAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVLLHLK*QTLVCS
Trigger: AGAGCAAACTAGAGTCTGTCATTTCAGATGAAGGAG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGCTGGATATCTTAGGTaGTGGAAACTGCAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPAGYLR*WKLQVS
Trigger: GGAGACTTGCAGTTTCCATCACCTAAGATATCCAGC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTGGATATCTTAGGTaGTGGAAACTGCAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAAGYLR*WKLQVS
Trigger: GGAGACTTGCAGTTTCCATCACCTAAGATATCCAGC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGAGGGCATTGTCCCGTaGATCAAATTTTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQEGIVP*IKFWTA
Trigger: AGCAGTCCAAAATTTGATTCACGGGACAATGCCCTC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGAGGGCATTGTCCCGTaGATCAAATTTTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKREGIVP*IKFWTA
Trigger: AGCAGTCCAAAATTTGATTCACGGGACAATGCCCTC...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTCTCATTTGAGGCACTaGGGGCATTGTCCCGTGAAT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETSHLRH*GHCPVN
Trigger: ATTCACGGGACAATGCCCTCAGTGCCTCAAATGAGA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTTGAGGTATTTAAGCTaGGGAGAGAGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELRYLS*GERMAS
Trigger: AGAGGCCATCCTCTCTCCTCAGCTTAAATACCTCAA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTCCTTTGGGGGTAAGTaGGCAGAGGAACTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQSFGGK*AEELSF
Trigger: AAAAGACAGTTCCTCTGCTCACTTACCCCCAAAGGA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCAAAGGAGGTGTTGGGTaGTATGCAGCTAATTCATCT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVKGGVG*YAANSS
Trigger: AGATGAATTAGCTGCATATCACCCAACACCTCCTTT...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGTTCTTTGTTCTCTTTaGATTCCTTCCGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKVLCSL*IPSGNC
Trigger: GCAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAAC...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGCAATCCTGACTAGATaGAAGATGAGGCGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPAILTR*KMRRSS
Trigger: ACTGGAACGCCTCATCTTTCATCTAGTCAGGATTGC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACTTGCTGCTGTTCTGTaGTGTCAGTCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLAAVL*CQSPWL
Trigger: CAGCCATGGAGACTGACATCACAGAACAGCAGCAAG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTCTGGTCCCATGAGATaGTGCCGTGTTAGACAGACA +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETSGPMR*CRVRQT
Trigger: TGTCTGTCTAACACGGCATCATCTCATGGGACCAGA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAGTTTTCTGGTCCCATaGGATGATGCCGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQSFLVP*DDAVLD
Trigger: GTCTAACACGGCATCATCTCATGGGACCAGAAAACT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTCAAATGTCAGAAATaGGAGGGTCCCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPFKCQK*EGPSGQ
Trigger: CTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR TCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCGAATCCACCAGCAGATaGACAGGCTCATATGCGGTT +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLESTSR*TGSYAV
Trigger: AACCGCATATGAGCCTGTTCATCTGCTGGTGGATTC...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCTCTCCCAAGAACACTaGAACACAGACTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETLSQEH*NTDCAT
Trigger: GGTTGCACAGTCTGTGTTTCAGTGTTCTTGGGAGAG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCCCCTTTCCCGAGACTaGATTGCGGGTAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETPLSRD*IAGNVH
Trigger: ATGAACATTACCCGCAATTCAGTCTCGGGAAAGGGG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568042.5
CDS-3UTR GCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACCCGTTCCATCATCCTaGGACGTTCTTCTGTTACCC +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKPVPSS*DVLLLP
Trigger: GGGTAACAGAAGAACGTCGCAGGATGATGGAACGGG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACAGGCACCAAGTACAGTaGCTGTTTCCTGGTAATTTA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHRHQVQ*LFPGNL
Trigger: TAAATTACCAGGAAACAGGCACTGTACTTGGTGCCT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp ATGTCTCAAATCTTCTCCTTCCACCGTGAAGCAATCCGGCTCAGAGTCATAGCATCTCTCATCTTCACTTaGTCCTGCCAGGAGGTAATA +
Preference number: 4 (lower is better)
Translates to: MSQIFSFHREAIRLRVIASLIFT*SCQEVI
Trigger: TATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGA...TGCTATGACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAGATTTGAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR GCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACACATCCCAGAGATAAATaGATTCTTGCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTHPRDK*ILAASQ
Trigger: CTGAGAAGCAGCAAGAATGCATTTATCTCTGGGATG...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATATCAAGCAAGGAGGTaGCACTTGATAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKYQARR*HLIVCS
Trigger: AGAGCAGACTATCAAGTGGCACCTCCTTGCTTGATA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCTCAGATGGAGGAAATaGTGCCTACACAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETLRWRK*CLHSKT
Trigger: GGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCTGGATAATAACAGATaGTTGTCTCAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLDNNR*LSQMEE
Trigger: TTCCTCCATCTGAGACAAGCATCTGTTATTATCCAG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGTAGGCTTTCCATCTTaGTTGTATGCAAATAGCAGC +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSVGFPS*LYANSS
Trigger: GCTGCTATTTGCATACAAGCAAGATGGAAAGCCTAC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGACAAGCACATCTTCCTaGAAGTCCACACCACTCTGG +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETTSTSS*KSTPLW
Trigger: CCAGAGTGGTGTGGACTTGCAGGAAGATGTGCTTGT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCTTCACAGGTTTCCATaGTGGTTCATCTTCTTTATG +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLHRFP*WFIFFM
Trigger: CATAAAGAAGATGAACCAGCATGGAAACCTGTGAAG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAATCACATCTGTGCCTaGAAAGAGTGGCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKENHICA*KEWRNL
Trigger: GAGGTTTCGCCACTCTTTGCAGGCACAGATGTGATT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGAATCACATCTGTGCCTaGAAAGAGTGGCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRNHICA*KEWRNL
Trigger: GAGGTTTCGCCACTCTTTGCAGGCACAGATGTGATT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTTGGACAGAGTCATTTTaGCAATGCATAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSWTESF*QCIESK
Trigger: TTTGGATTCTATGCATTGGCAAAATGACTCTGTCCA...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATCTAGTGTATCCTTCTTaGTGTCTTCATTATCTAGGT +
Preference number: 4 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDLVYPS*CLHYLG
Trigger: ACCTAGATAATGAAGACAGCAAGAAGGATACACTAG...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCATACTTGCATAATTTaGAAACAGAGGCTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHHTCII*KQRLGP
Trigger: TGGACCGAGCCTCTGTTTGCAAATTATGCAAGTATG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACGATTAGTGTCTTCCTaGAGAGCAATCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKRLVSS*RAILTR
Trigger: TCTAGTCAGGATTGCTCTGCAGGAAGACACTAATCG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTGTAGGTTCTCAATCTaGTCAGTCAGTACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICCRFSI*SVSTLS
Trigger: GGAGAGAGTACTGACTGAGCAGATTGAGAACCTACA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGCTGTTGGTTGGAGGTaGAGTCTGGGTCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKAVGWR*SLGPQF
Trigger: AAACTGTGGACCCAGACTGCACCTCCAACCAACAGC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGAGGAGAGAGAGACTCTaGCTTAACAAAAGACTTAAT +
Preference number: 4 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGRRERL*LNKRLN
Trigger: ATTAAGTCTTTTGTTAAGGCAGAGTCTCTCTCTCCT...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAAGTTTTCCCAGTTGGTaGTTATCATACATTTTGACA +
Preference number: 4 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTSFPSW*LSYILT
Trigger: TGTCAAAATGTATGATAACCACCAACTGGGAAAACT...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATT +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSPDKRV*TSPVDI
Trigger: AATATCTACTGGAGAAGTCCAGACTCGTTTATCAGG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPPDKRV*TSPVDI
Trigger: AATATCTACTGGAGAAGTCCAGACTCGTTTATCAGG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTCTCTGCCAACTTGTATaGCAAAATAAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSLCQLV*QNKLFS
Trigger: GGAGAAAAGCTTATTTTGCCATACAAGTTGGCAGAG...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCTCGTGAGAATTCCATaGGCTCTCTCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETLVRIP*ALSRSL
Trigger: CAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGATGCTTGTCTCAGATaGAGGAAATGCTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRDACLR*RKCCLH
Trigger: GTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATC...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAACACCACTCTGGCTTTaGGCTCTCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAETPLWL*ALSCCL
Trigger: CAAGCAGCAGGAGAGAGCCCAAAGCCAGAGTGGTGT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGATCCTCCAAGGATCTaGGTCTCTCTCTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEADPPRI*VSLLQA
Trigger: TGCTTGTAAGAGAGAGACCCAGATCCTTGGAGGATC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAATCAGGTGTACCCCGTaGAGACTGAAGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAIRCTP*RLKAFR
Trigger: CCTGAAGGCCTTCAGTCTCCACGGGGTACACCTGAT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGGAATTTGTTTTCAGTaGGTCTTGTTGGGGGATATA +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPGICFQ*VLLGDI
Trigger: TATATCCCCCAACAAGACCCACTGAAAACAAATTCC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGGGAATTTGTTTTCAGTaGGTCTTGTTGGGGGATATA +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRGICFQ*VLLGDI
Trigger: TATATCCCCCAACAAGACCCACTGAAAACAAATTCC...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATATACTTGTGTCTAGTTaGGAATTTGTTTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHILVSS*EFVFSG
Trigger: CCCACTGAAAACAAATTCCCAACTAGACACAAGTAT...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACAGGCTACATTCAGCTaGGTGCCCATTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKQATFS*VPILSV
Trigger: GACAGACAGAATGGGCACCCAGCTGAATGTAGCCTG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGGCTGTAAGACTGAGTTaGCCTAAAGTGTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRAVRLS*PKVFSF
Trigger: AAAAGAGAACACTTTAGGCCAACTCAGTCTTACAGC...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACAGTTCGGTCTTCACTaGTCAAACGGGACAGTTCAA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAQFGLH*SNGTVQ
Trigger: TTGAACTGTCCCGTTTGACCAGTGAAGACCGAACTG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACAGAATCAGTGACAACCTaGTCTTTGCCTTATTCTCAG +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTESVTT*SLPYSQ
Trigger: CTGAGAATAAGGCAAAGACCAGGTTGTCACTGATTC...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAGGAGACGATGGACCTaGATAGTTTCCTCGACGAAT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQRRRWT*IVSSTN
Trigger: ATTCGTCGAGGAAACTATCCAGGTCCATCGTCTCCT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTACAACAGGAGACGATaGACCTGGATAGTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQYNRRR*TWIVSS
Trigger: CGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATACAACAGGAGACGATaGACCTGGATAGTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAYNRRR*TWIVSS
Trigger: CGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCGCTTTCGCAACTTGCTaGAAGGTTCAGACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFAFATC*KVQTCQ
Trigger: CTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGC...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATCCAGGAATTTGGTCTaGCCCAATGGTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEASRNLV*PNGPSI
Trigger: AATGGAAGGACCATTGGGCCAGACCAAATTCCTGGA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTCCAGGAATTTGGTCTaGCCCAATGGTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRSRNLV*PNGPSI
Trigger: AATGGAAGGACCATTGGGCCAGACCAAATTCCTGGA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTGTCTTCCAGGAATTTaGTCTGGCCCAATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRCLPGI*SGPMVL
Trigger: AAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCCAGGAATTTaGTCTGGCCCAATGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASCLPGI*SGPMVL
Trigger: AAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCAGCCAAGGCACAGCTaGCACCATCCCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGQPRHS*HHPQQA
Trigger: AGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTAGAGAAAAGCCTGAATaGCTTAGGATGAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSREKPE*LRMKPS
Trigger: TGAAGGTTTCATCCTAAGCCATTCAGGCTTTTCTCT...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACAACATATGTTCTTCTaGCCATTCCTCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAQHMFF*PFLWAT
Trigger: TGTGGCCCAGAGGAATGGCCAGAAGAACATATGTTG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCACCCACCCCAATCCTaGCAGATTAAATTACTAGAA +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSHPPQS*QIKLLE
Trigger: TTCTAGTAATTTAATCTGCCAGGATTGGGGTGGGTG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CAA 72 bp CATATGCTTAGAAAAGAGGCAGGACCACAATTAGGATaGACTATTGTGGACGAGGTGATGAAACGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HMLRKEAGPQLG*TIVDEVMKRSP
Trigger: GGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCTAAGCATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR CAA 72 bp ATACCAAGGAGTTTTACTACCAAGGCCAGCATGGTATaGCAGGACAGTGCTGGGGAGTTGTCACAAGAGTAT +
Preference number: 4 (lower is better)
Translates to: IPRSFTTKASMV*QDSAGELSQEY
Trigger: ATACTCTTGTGACAACTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTTGGTAGTAAAACTCCTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGCTACCATAATGGATTaGTCCATCAAGGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHATIMD*SIKVFL
Trigger: GAGAAAAACCTTGATGGATCAATCCATTATGGTAGC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACAGAGCAGTAAGGTGGTaGATAAGAAAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHRAVRW*IRKFVL
Trigger: AAGCACAAACTTTCTTATTCACCACCTTACTGCTCT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTGGCAAATCCTTTCTaGCTGAGAGCAGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLANPF*LRAVRW
Trigger: CCACCTTACTGCTCTCAGTCAGAAAGGATTTGCCAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCATCCCAGCTCTGTCTaGGGGGTTTCTTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETHPSSV*GVSLLS
Trigger: AGATAACAAAGAAACCCCTCAGACAGAGCTGGGATG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp TCTCTCATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGCATCCCAGCTCTGTCTaGGGGGTTTCTTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: SLIFTCSCQEVIEYMIVPHPSSV*GVSLLS
Trigger: AGATAACAAAGAAACCCCTCAGACAGAGCTGGGATG...CGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAAGCAACCATGGCTCTaGAAAAAGCTCGGAGAATTG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEKQPWL*KKLGEL
Trigger: CAATTCTCCGAGCTTTTTTCAGAGCCATGGTTGCTT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTTGGAGCTGTATCCTaGTTGGCGAATTCGAACTGT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRFGAVS*LANSNC
Trigger: ACAGTTCGAATTCGCCAATCAGGATACAGCTCCAAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTTGGAGCTGTATCCTaGTTGGCGAATTCGAACTGT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPFGAVS*LANSNC
Trigger: ACAGTTCGAATTCGCCAATCAGGATACAGCTCCAAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTACACAGCAAGACCCTaGACCATCGCTGCAACAATA +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETYTARP*TIAATI
Trigger: TATTGTTGCAGCGATGGTTCAGGGTCTTGCTGTGTA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCGCTGCCTCTCTAAGTaGGCACGCCAGGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGRCLSK*ARQEAW
Trigger: CCAAGCTTCCTGGCGTGCTCACTTAGAGAGGCAGCG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAAGGGTCTGAACCCTaGATTTCCAGAGATCCATAT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAEGSEP*ISRDPY
Trigger: ATATGGATCTCTGGAAATTCAGGGTTCAGACCCTTC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAGTTCCAAGCTTCCTTaGGAGCTCTCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETSSKLP*ELSLSG
Trigger: ACCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGCTGGATATCTTAGGTaGTGGAAACTGCAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETAGYLR*WKLQVS
Trigger: GGAGACTTGCAGTTTCCATCACCTAAGATATCCAGC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATCTTTTCCTGAGCAGTaGTACCTTCTAGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPSFPEQ*YLLVSL
Trigger: CAGGGAAACTAGAAGGTATCACTGCTCAGGAAAAGA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTTTTCAATTGTCTTaGAGGCTTTGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAAFQLS*RLCAPS
Trigger: AGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGTTCTTTGTTCTCTTTaGATTCCTTCCGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQVLCSL*IPSGNC
Trigger: GCAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAAC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTCTTTGTTCTCTTTaGATTCCTTCCGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEVLCSL*IPSGNC
Trigger: GCAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAAC...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCATCGCCAATGCAGATaGATAAAAGCTGAAGATATT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPHRQCR*IKAEDI
Trigger: AATATCTTCAGCTTTTATTCATCTGCATTGGCGATG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTGTGGCTGTGCAATCTaGAGTCTTGAATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSCGCAI*SLEFIH
Trigger: ATGAATGAATTCAAGACTTCAGATTGCACAGCCACA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTGTGGCTGTGCAATCTaGAGTCTTGAATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHCGCAI*SLEFIH
Trigger: ATGAATGAATTCAAGACTTCAGATTGCACAGCCACA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTGGCTTTAAAGATGTaGCCATTGTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEVALKM*PLCSST
Trigger: GGTGGAAGAACACAATGGTCACATCTTTAAAGCCAC...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCCCAAATTGTCGAGATaGCAGCTCTGGATCATACTT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEPKLSR*QLWIIL
Trigger: AAGTATGATCCAGAGCTGTCATCTCGACAATTTGGG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGCAATCCTGACTAGATaGAAGATGAGGCGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETAILTR*KMRRSS
Trigger: ACTGGAACGCCTCATCTTTCATCTAGTCAGGATTGC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCATATTCAAATTCTCTaGGCTATCAGCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVHIQIL*AISSPN
Trigger: ATTGGGACTGCTGATAGCTCAGAGAATTTGAATATG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGCTGAATGGCTTAGGATaGAACCTTCATAAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVELNGLG*NLHKFR
Trigger: CCTAAACTTATGAAGGTTTCATCCTAAGCCATTCAG...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTATAACTCATGTGTATaGAGACCACCCAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICYNSCV*RPPSGE
Trigger: TTCACCACTGGGTGGTCTTCATACACATGAGTTATA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGTGACCCTCTGTTTTTaGTGGAGAAAACAACGCTAC +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPVTLCF*WRKQRY
Trigger: GTAGCGTTGTTTTCTCCATCAAAAACAGAGGGTCAC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTCAGCACATTTCTGTaGCCCTCTGTTTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICFSTFL*PSVFDG
Trigger: TCCATCAAAAACAGAGGGTCACAGAAATGTGCTGAA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGGCCAAAAGTGCTTATaGAGTTGCCCTCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPGQKCL*SCPPTE
Trigger: TTCTGTGGGAGGGCAACTTCATAAGCACTTTTGGCC...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp ATGTCTCAAATCTTCTCCTTCCACCGTGAAGCAATCCGGCTCAGAGTCATAGCAATCTTCACTTGCTCCTaGCAGGAGGTAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: MSQIFSFHREAIRLRVIAIFTCS*QEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT...TGCTATGACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAGATTTGAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR GCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATCTCTCATCTTCACTTaGTCCTGCCAGGAGGTAATA +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPSLIFT*SCQEVI
Trigger: TATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATCTCTCATCTTCACTTaGTCCTGCCAGGAGGTAATA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEASLIFT*SCQEVI
Trigger: TATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACACTGTCACAGCCTCTaGCAACTTGTATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAHCHSL*QLVWQN
Trigger: ATTTTGCCATACAAGTTGGCAGAGGCTGTGACAGTG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTATCAAGCAAGGAGGTaGCACTTGATAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRYQARR*HLIVCS
Trigger: AGAGCAGACTATCAAGTGGCACCTCCTTGCTTGATA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATTACAAAATATGGTTCTaGTTGACCAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHYKIWF*LTKCFH
Trigger: ATGGAAACACTTGGTCAAGCAGAACCATATTTTGTA...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCAGCAGATCTTGTAAGTaGTGTCGTTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASSRSCK*CRSCSF
Trigger: AAAGGAGCAGGAACGACAGCACTTACAAGATCTGCT...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAACAAAAGCATCCTTCTaGACAGCTGCATCTCTGACT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPTKASF*TAASLT
Trigger: AGTCAGAGATGCAGCTGTGCAGAAGGATGCTTTTGT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTGGAGAAGAGCAGCTaGACTAGCCATAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLEKSS*TSHNKS
Trigger: GCTTTTGTTATGGCTAGTGCAGCTGCTCTTCTCCAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGTAGGCTTTCCATCTTaGTTGTATGCAAATAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICVGFPS*LYANSS
Trigger: GCTGCTATTTGCATACAAGCAAGATGGAAAGCCTAC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTAAGCTAAATATAGCTTaGTCTAGTTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PQREGPTLLSTLIILWLSKLNIA*SSSLIL
Trigger: GAGAATGAGAGAACTAGAGCAAGCTATATTTAGCTT...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTCCATCCTTCAAATaGTCTGCACTGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEVPSFK*SALLVS
Trigger: TGAGACTAGCAGTGCAGAGCATTTGAAGGATGGAAC...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGTTCCATCCTTCAAATaGTCTGCACTGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQVPSFK*SALLVS
Trigger: TGAGACTAGCAGTGCAGAGCATTTGAAGGATGGAAC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTCTAAAATATCTGTTTaGTGGCGAATCTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPSKISV*WRICSI
Trigger: GATGGAACAGATTCGCCAGCAAACAGATATTTTAGA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTGATAGGAAGATGGTaGCACCAAACACTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLIGRW*HQTLSN
Trigger: ATTGGAGAGTGTTTGGTGGCACCATCTTCCTATCAG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCTGATAGGAAGATGGTaGCACCAAACACTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELIGRW*HQTLSN
Trigger: ATTGGAGAGTGTTTGGTGGCACCATCTTCCTATCAG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCTGATAGGAAGATGGTaGCACCAAACACTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLIGRW*HQTLSN
Trigger: ATTGGAGAGTGTTTGGTGGCACCATCTTCCTATCAG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTTCACAGGTTTCCATaGTGGTTCATCTTCTTTATG +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLHRFP*WFIFFM
Trigger: CATAAAGAAGATGAACCAGCATGGAAACCTGTGAAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCTTCACAGGTTTCCATaGTGGTTCATCTTCTTTATG +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVLHRFP*WFIFFM
Trigger: CATAAAGAAGATGAACCAGCATGGAAACCTGTGAAG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCAGCCTTCTGTCTCACTaGCAACTTGGTAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLSLLSH*QLGNLS
Trigger: GGAGAGATTACCAAGTTGGCAGTGAGACAGAAGGCT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAATCACATCTGTGCCTaGAAAGAGTGGCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETNHICA*KEWRNL
Trigger: GAGGTTTCGCCACTCTTTGCAGGCACAGATGTGATT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCCGATTAGTGTCTTCCTaGAGAGCAATCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASRLVSS*RAILTR
Trigger: TCTAGTCAGGATTGCTCTGCAGGAAGACACTAATCG...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCTGCATAGCTGCTTGCTaGTGTTCTGTGATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLCIAAC*CSVMSV
Trigger: GACTGACATCACAGAACAGCAGCAAGCAGCTATGCA...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTGTAGGTTCTCAATCTaGTCAGTCAGTACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQCRFSI*SVSTLS
Trigger: GGAGAGAGTACTGACTGAGCAGATTGAGAACCTACA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTGCTGCTTTTTAAGTTaGTTTCGCAACTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHCCFLS*FRNLLE
Trigger: TTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTTVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGACATTCTGGAGCAAGTaGAGAGTAACAATTAATGCC +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVETFWSK*RVTINA
Trigger: GGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCGGGGCTGGGAATGTGTaGTGTGAGAAGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSGAGNV*CEKSAL
Trigger: CAGAGCACTCTTCTCACAGCACACATTCCCAGCCCC...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATTTTGCGCTGAAGCATaGCATGATAAGCTACATCAG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKFCAEA*HDKLHQ
Trigger: CTGATGTAGCTTATCATGCCATGCTTCAGCGCAAAA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAAAGGCCTCAAGTACTaGTCCAGCTCCAAGAATAAT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKKGLKY*SSSKNN
Trigger: ATTATTCTTGGAGCTGGACCAGTACTTGAGGCCTTT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTGGTGGACTGGGTGTTaGAGAAAGCTAAAACTATCC +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRWWTGC*RKLKLS
Trigger: GGATAGTTTTAGCTTTCTCCAACACCCAGTCCACCA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAGAAGTACATGGAAGTaGCTCACAAAATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSRSTWK*LTKSWK
Trigger: TTTCCAGGATTTTGTGAGCCACTTCCATGTACTTCT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGGCACGCCAGGAAGCTTaGAGAAGAGCAGCTGCACTA +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRARQEA*RRAAAL
Trigger: TAGTGCAGCTGCTCTTCTCCAAGCTTCCTGGCGTGC...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGAAGTCCACACCACTCTaGCTTTGGGCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRKSTPL*LWALSC
Trigger: GCAGGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGATCAGGTGTACCCCGTaGAGACTGAAGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRIRCTP*RLKAFR
Trigger: CCTGAAGGCCTTCAGTCTCCACGGGGTACACCTGAT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGGAGTCTTTCAGCTGTaGTTTACAGGTAATAGACTC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICGVFQL*FTGNRL
Trigger: GAGTCTATTACCTGTAAACCACAGCTGAAAGACTCC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCAAAATATCTGTTTGCTaGCGAATCTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPKISVC*RICSII
Trigger: GATGATGGAACAGATTCGCCAGCAAACAGATATTTT...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGCTGAGGAGAGAGGATaGCCTCTCTACTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKAEERG*PLYSLL
Trigger: AAGCAAAGAGTAGAGAGGCCATCCTCTCTCCTCAGC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACAGGCTACATTCAGCTaGGTGCCCATTCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTQATFS*VPILSV
Trigger: GACAGACAGAATGGGCACCCAGCTGAATGTAGCCTG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACAGCTGTAAGACTGAGTTaGCCTAAAGTGTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTAVRLS*PKVFSF
Trigger: AAAAGAGAACACTTTAGGCCAACTCAGTCTTACAGC...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACAACACTTGCTATGATCTaGACAGAGTCATTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: AASLCGDITLPCRGPVRTTLAMI*TESFCQ
Trigger: TTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGT...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACACACTTGCTATGATCTaGACAGAGTCATTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHTLAMI*TESFCQ
Trigger: TTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATTTTTGGCACCTTTGTaGCTGTGCAATCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKFLAPL*LCNLKS
Trigger: AGACTTCAGATTGCACAGCCACAAAGGTGCCAAAAA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGTTCGGTCTTCACTaGTCAAACGGGACAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLQFGLH*SNGTVQ
Trigger: TTGAACTGTCCCGTTTGACCAGTGAAGACCGAACTG...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGAATCAGTGACAACCTaGTCTTTGCCTTATTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICESVTT*SLPYSQ
Trigger: CTGAGAATAAGGCAAAGACCAGGTTGTCACTGATTC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTTACAACAGGAGACGATaGACCTGGATAGTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLYNRRR*TWIVSS
Trigger: CGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTA...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGCTTTCGCAACTTGCTaGAAGGTTCAGACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKAFATC*KVQTCQ
Trigger: CTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGGCAGCTCGGTAGAATaGAGATTTGGAATAAATCTG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICGSSVE*RFGINL
Trigger: CAGATTTATTCCAAATCTCCATTCTACCGAGCTGCC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTTCCAGGAATTTGGTCTaGCCCAATGGTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLSRNLV*PNGPSI
Trigger: AATGGAAGGACCATTGGGCCAGACCAAATTCCTGGA...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTCCAGGAATTTGGTCTaGCCCAATGGTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETSRNLV*PNGPSI
Trigger: AATGGAAGGACCATTGGGCCAGACCAAATTCCTGGA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACCTCTGGGGTCTCTTTaGTTTTCTGAGGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPPLGSL*FSEVSF
Trigger: AAAACTCACCTCAGAAAACCAAAGAGACCCCAGAGG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTCCCCAGGCCCTAGGTaGCTTTGTATAGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRSPGPR*LCIVKI
Trigger: GATTTTTACTATACAAAGCCACCTAGGGCCTGGGGA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATCCCCAGGCCCTAGGTaGCTTTGTATAGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEASPGPR*LCIVKI
Trigger: GATTTTTACTATACAAAGCCACCTAGGGCCTGGGGA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTCCCCAGGCCCTAGGTaGCTTTGTATAGTAAAAATC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQSPGPR*LCIVKI
Trigger: GATTTTTACTATACAAAGCCACCTAGGGCCTGGGGA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGAGTGCTCTGCATTTTaGAGTATGGGCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQECSAF*SMGSKC
Trigger: ACATTTGGAGCCCATACTCCAAAATGCAGAGCACTC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
3UTR CAA 72 bp AAAGAGTCTTGCTGCTTTTTAAGTTGCTTTCGCAACTaGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KESCCFLSCFRN*LEGSDLPAVFR
Trigger: CCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAAGACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGTAGATTGTCCCTTCTaGAATAGCCCCAGGATATAT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPVDCPF*NSPRIY
Trigger: ATATATCCTGGGGCTATTTCAGAAGGGACAATCTAC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACACAGCATCATTCGCTaGACTGGACAATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPHSIIR*TGQSVG
Trigger: TCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGCTACCATAATGGATTaGTCCATCAAGGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKATIMD*SIKVFL
Trigger: GAGAAAAACCTTGATGGATCAATCCATTATGGTAGC...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAGAACCACTCTCTCCTaGAATCACGATGCACTGATT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETRTTLS*NHDALI
Trigger: AATCAGTGCATCGTGATTTCAGGAGAGAGTGGTTCT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp TGTAGGCGCTCAAAGTCATGTCTCAAATCTTCTCCTTCCACCGTGAAGCAATCCAGAGCAGTAAGGTGGTaGATAAGAAAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: CRRSKSCLKSSPSTVKQSRAVRW*IRKFVL
Trigger: AAGCACAAACTTTCTTATTCACCACCTTACTGCTCT...GGATTGCTTCACGGTGGAAGGAGAAGATTTGAGACATGACTTTGAGCGCCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCTTCCCAAAACGACTTaGATTGTTATTATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVLPKTT*IVIMSC
Trigger: ACAGCTCATAATAACAATTCAAGTCGTTTTGGGAAG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp TCTCAAATCTTCTCCTTCCACCGTGAAGCAATCCGGCTCAGAGTCATAGCAATACTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: SQIFSFHREAIRLRVIAILKMEC*SLIFTC
Trigger: GCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAG...TATTGCTATGACTCTGAGCCGGATTGCTTCACGGTGGAAGGAGAAGATTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTCTATGTTGTGCCAGCTaGTACCTTCAGTTCTATATT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICLCCAS*YLQFYI
Trigger: AATATAGAACTGAAGGTATCAGCTGGCACAACATAG...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCTTCATCCAAAAGATaGAGCAGTCCTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSSSKR*SSPVGF
Trigger: AAAACCAACAGGACTGCTTCATCTTTTGGATGAAGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATTGTCTAGCAATGTTTaGTTTGTAGCCTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKLSSNV*FVACGK
Trigger: CTTTCCACAGGCTACAAATCAAACATTGCTAGACAA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCAAGCAACCATGGCTCTaGAAAAAGCTCGGAGAATTG +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLKQPWL*KKLGEL
Trigger: CAATTCTCCGAGCTTTTTTCAGAGCCATGGTTGCTT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAATTTTTGTTTCTCGTaGGAATTCCATGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKNFCFS*EFHGLS
Trigger: AGAGAGCCCATGGAATTCTCACGAGAAACAAAAATT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCACGGAGCACCTCTTGGTaGAGCAGATCTTGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPRSTSW*SRSCKC
Trigger: GCACTTACAAGATCTGCTTCACCAAGAGGTGCTCCG...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTGAAGGGTCTGAACCCTaGATTTCCAGAGATCCATAT +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLEGSEP*ISRDPY
Trigger: ATATGGATCTCTGGAAATTCAGGGTTCAGACCCTTC...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACCATCTGCGATCCTCTaGAGGAGAAATACCACCAAG +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTPSAIL*RRNTTK
Trigger: CTTGGTGGTATTTCTCCTTCAGAGGATCGCAGATGG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCGTACCCCGTGGAGACTaGAGGCCTTCAGGCACCAAT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIVPRGD*RPSGTN
Trigger: ATTGGTGCCTGAAGGCCTTCAGTCTCCACGGGGTAC...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAACTGCTAGTCTCATTTaGGGCACTGAGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTATASLI*GTEGIV
Trigger: GACAATGCCCTCAGTGCCTCAAATGAGACTAGCAGT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAACTGCTAGTCTCATTTaGGGCACTGAGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAETASLI*GTEGIV
Trigger: GACAATGCCCTCAGTGCCTCAAATGAGACTAGCAGT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCCCCAAATTGTCGAGATaGCAGCTCTGGATCATACTT +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLPKLSR*QLWIIL
Trigger: AAGTATGATCCAGAGCTGTCATCTCGACAATTTGGG...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCAGGGCCTCATTACCTaGGGCAGCTCGGTAGAATGG +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGQGLIT*GSSVEW
Trigger: CCATTCTACCGAGCTGCCTCAGGTAATGAGGCCCTG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAACGCAGCCCCAAAGGTaGGATTTGTTTACCACTCTG +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTATQPQR*DLFTTL
Trigger: CAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR TCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCCAGGTTTCCAAAGCATaGGAAGGTGGGGGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSQVSKA*EGGGSS
Trigger: ACTAGAGCCCCCACCTTCTCATGCTTTGGAAACCTG...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAACTCCTGAAATCACGATaGACTGATTCTTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSELLKSR*TDSFCA
Trigger: AGCGCAAAAAGAATCAGTGCATCGTGATTTCAGGAG...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAGGCACCAAGTACAGTaGCTGTTTCCTGGTAATTTA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEARHQVQ*LFPGNL
Trigger: TAAATTACCAGGAAACAGGCACTGTACTTGGTGCCT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCATCCCAGAGATAAATaGATTCTTGCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEHPRDK*ILAASQ
Trigger: CTGAGAAGCAGCAAGAATGCATTTATCTCTGGGATG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAAGTGCTGTCGTTCCTaGTCCTTTAGAAAGACCATG +
Preference number: 4 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFKCCRS*SFRKTM
Trigger: CATGGTCTTTCTAAAGGAGCAGGAACGACAGCACTT...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAACCCTGAACCATCGCTaGAACAATATGATTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKTLNHR*NNMILR
Trigger: CCGCAGAATCATATTGTTGCAGCGATGGTTCAGGGT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAAGATGGAGGAAATGCTaGCTACACAGCAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAERWRKC*LHSKTL
Trigger: CAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAACTGGATAATAACAGATaGTTGTCTCAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKLDNNR*LSQMEE
Trigger: TTCCTCCATCTGAGACAAGCATCTGTTATTATCCAG...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATGGGCTCTCTCCTGCTaGTTGTTTGGTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPWALSC*LFGDSF
Trigger: GAAGGAGTCACCAAACAAGCAGCAGGAGAGAGCCCA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAACAAGCACATCTTCCTaGAAGTCCACACCACTCTGG +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAETSTSS*KSTPLW
Trigger: CCAGAGTGGTGTGGACTTGCAGGAAGATGTGCTTGT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTCTTTTTCATTCTGTTaGTGCAACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPSFSFC*CNCFCL
Trigger: AAGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGAGTCATTTTGCCAATaGATAGAATCCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQESFCQ*IESKAT
Trigger: CGTGGCTTTGGATTCTATGCATTGGCAAAATGACTC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAGTCATTTTGCCAATaGATAGAATCCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAESFCQ*IESKAT
Trigger: CGTGGCTTTGGATTCTATGCATTGGCAAAATGACTC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGGTCTTTATACCGTATaGTTTTCCCATCATCCATCG +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPGLYTV*FSHHPS
Trigger: CGATGGATGATGGGAAAAGCATACGGTATAAAGACC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATCTGTATCTAGACCCTaGCGAAGCTCCTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEASVSRP*RSSLIL
Trigger: TAAAATCAAGGAGCTTCGGCAGGGTCTAGATACAGA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCGATTAGTGTCTTCCTaGAGAGCAATCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETRLVSS*RAILTR
Trigger: TCTAGTCAGGATTGCTCTGCAGGAAGACACTAATCG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCAGGGCAGCGGAGAATaGAGGGCGCAAACACAATGG +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGQGSGE*RAQTQW
Trigger: CCATTGTGTTTGCGCCCTGCATTCTCCGCTGCCCTG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTGTAGGTTCTCAATCTaGTCAGTCAGTACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETCRFSI*SVSTLS
Trigger: GGAGAGAGTACTGACTGAGCAGATTGAGAACCTACA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCTGGAAGGTTCAGACTTaGCAGCTGTCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSWKVQT*QLSSGS
Trigger: GCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCA...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTCTAAAGAGTCTTGCTaGTTTTTAAGTTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHSKESC*FLSCFR
Trigger: GCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQTVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTCCTGTCCCATCAGCATaGATAGTATATGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICPVPSA*IVYVQS
Trigger: ACTTTGAACATATACTATCCATGCTGATGGGACAGG...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACATCATTCGCTGAACTaGACAATCTGTTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAHHSLN*TICWIE
Trigger: CTCAATCCAACAGATTGTCCAGTTCAGCGAATGATG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTTTTCTGTTGAGGCTGTaGAAGAAAACCCCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLFLLRL*KKTPFH
Trigger: ATGGAACGGGGTTTTCTTCCACAGCCTCAACAGAAA...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAAAGGCCTCAAGTACTaGTCCAGCTCCAAGAATAAT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQKGLKY*SSSKNN
Trigger: ATTATTCTTGGAGCTGGACCAGTACTTGAGGCCTTT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCATCCTACCATTTCCATaGCAAGTTGTAGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLILPFP*QVVGAQ
Trigger: TTGAGCGCCTACAACTTGCCATGGAAATGGTAGGAT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAGGCTCCATCACGGCTaGAAATTCGATGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQRLHHG*KFDVRI
Trigger: AATTCTTACATCGAATTTCCAGCCGTGATGGAGCCT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACAGAAAGAGGTGTTCTaGGATTTTTCCGGGTTATAC +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPQKEVF*DFSGLY
Trigger: GTATAACCCGGAAAAATCCCAGAACACCTCTTTCTG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCCTGGAAAGAATATTTaGAGCTGTATCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQPGKNI*SCILIG
Trigger: GCCAATCAGGATACAGCTCCAAATATTCTTTCCAGG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGCTGAGGAGAGAGGATaGCCTCTCTACTCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTAEERG*PLYSLL
Trigger: AAGCAAAGAGTAGAGAGGCCATCCTCTCTCCTCAGC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGAGGAACTGTCTTTTTaGGCAAGAGCTGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQEELSF*ARAASF
Trigger: AAAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTTGACAGTACTAGATTaGCATGGACTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLTVLD*HGLPFL
Trigger: AAGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTTTTGGCACCTTTGTaGCTGTGCAATCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPFLAPL*LCNLKS
Trigger: AGACTTCAGATTGCACAGCCACAAAGGTGCCAAAAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACAGACAGCACTTCTTATaGCAAGCATACTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHRQHFL*QAYLHN
Trigger: ATTATGCAAGTATGCTTGCCATAAGAAGTGCTGTCT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCAGACAGCACTTCTTATaGCAAGCATACTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVRQHFL*QAYLHN
Trigger: ATTATGCAAGTATGCTTGCCATAAGAAGTGCTGTCT...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCTCTAACCTCTGGGGCTaGCCAATAACCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSSNLWG*PITTEA
Trigger: TGCCTCAGTGGTTATTGGCCAGCCCCAGAGGTTAGA...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTACCATCCCAGGACCTCTaGCCCTTTTGTCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLPSQDL*PFCLSL
Trigger: CAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGG...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATTCCGGGTTATACCCTaGTGTAGGATGCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTFRVIP*CRMLLV
Trigger: AACCAGGAGCATCCTACACCAGGGTATAACCCGGAA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAGAACCACTCTCTCCTaGAATCACGATGCACTGATT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPRTTLS*NHDALI
Trigger: AATCAGTGCATCGTGATTTCAGGAGAGAGTGGTTCT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAAGAAAGTTTGTGCTTTaGGTCTTCCCAGAACCACTC +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKRKFVL*VFPEPL
Trigger: GAGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCAGAGCAGTAAGGTGGTaGATAAGAAAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASRAVRW*IRKFVL
Trigger: AAGCACAAACTTTCTTATTCACCACCTTACTGCTCT...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTCTTCATCCAAAAGATaGAGCAGTCCTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRSSSKR*SSPVGF
Trigger: AAAACCAACAGGACTGCTTCATCTTTTGGATGAAGA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAATTTTTGTTTCTCGTaGGAATTCCATGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEANFCFS*EFHGLS
Trigger: AGAGAGCCCATGGAATTCTCACGAGAAACAAAAATT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAAAATATGGTTCTGCTTaGCCAAGTGTTTCCATTAGC +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPKYGSA*PSVSIS
Trigger: GCTAATGGAAACACTTGGTCAAGCAGAACCATATTT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAATACACAGCAAGACCCTaGACCATCGCTGCAACAATA +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEYTARP*TIAATI
Trigger: TATTGTTGCAGCGATGGTTCAGGGTCTTGCTGTGTA...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAAGTTCCAAGCTTCCTTaGGAGCTCTCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTSSKLP*ELSLSG
Trigger: ACCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGCTGGATATCTTAGGTaGTGGAAACTGCAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTAGYLR*WKLQVS
Trigger: GGAGACTTGCAGTTTCCATCACCTAAGATATCCAGC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCTCATTTGAGGCACTaGGGGCATTGTCCCGTGAAT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSHLRH*GHCPVN
Trigger: ATTCACGGGACAATGCCCTCAGTGCCTCAAATGAGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAAATCTGATCTTTTCCTaGGCAGTGATACCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPNLIFS*AVIPSS
Trigger: ACTAGAAGGTATCACTGCTCAGGAAAAGATCAGATT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCAATCTGATCTTTTCCTaGGCAGTGATACCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASNLIFS*AVIPSS
Trigger: ACTAGAAGGTATCACTGCTCAGGAAAAGATCAGATT...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCTCATCTTAGCTCTCTaGGGTCTTATATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLILAL*GLISES
Trigger: AGATTCAGATATAAGACCTCAGAGAGCTAAGATGAG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCATATTCAAATTCTCTaGGCTATCAGCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEHIQIL*AISSPN
Trigger: ATTGGGACTGCTGATAGCTCAGAGAATTTGAATATG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACATATTCAAATTCTCTaGGCTATCAGCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAHIQIL*AISSPN
Trigger: ATTGGGACTGCTGATAGCTCAGAGAATTTGAATATG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAAGTTTTCTGGTCCCATaGGATGATGCCGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTASFLVP*DDAVLD
Trigger: GTCTAACACGGCATCATCTCATGGGACCAGAAAACT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR TCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAACTGAGGCAGTGGCGTaGGGTTCAGTGTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLTEAVA*GSVLCN
Trigger: GTTACACAACACTGAACCTCACGCCACTGCCTCAGT...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGCTTTGAACACATCCTaGGAATCCTTTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRALNTS*ESFLLS
Trigger: AGAAAGAAGAAAGGATTCTCAGGATGTGTTCAAAGC...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTCCCGTTCCATCATCCTaGGACGTTCTTCTGTTACCC +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCPVPSS*DVLLLP
Trigger: GGGTAACAGAAGAACGTCGCAGGATGATGGAACGGG...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGATTATGAGCTGTCTTTaGATTTCCAAAGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEIMSCL*ISKGLK
Trigger: CTTGAGGCCTTTGGAAATGCAAAGACAGCTCATAAT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCATTTAGAGCATTCATaGCCTGGAGATCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLHLEHS*PGDQKE
Trigger: CTCTTTCTGATCTCCAGGGCATGAATGCTCTAAATG...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGTGCCACTTGATAGTCTaGTCTGGCGAATCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRCHLIV*SGESQF
Trigger: GAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCA...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGGTCAGTCTTGTCAGGTaGTTTAAAGAATTTACTTCT +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEVSLVR*FKEFTS
Trigger: AGAAGTAAATTCTTTAAAGCACCTGACAAGACTGAC...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTCAGATGGAGGAAATaGTGCCTACACAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLRWRK*CLHSKT
Trigger: GGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAATCCTTCTGCACAGCTaGATCTCTGACTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEILLHS*ISDLLL
Trigger: CAGAAGCAAGTCAGAGATGCAGCTGTGCAGAAGGAT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCAAGCTAAATATAGCTTaGTCTAGTTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVKLNIA*SSSLIL
Trigger: GAGAATGAGAGAACTAGAGCAAGCTATATTTAGCTT...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTCTTTTTCATTCTGTTaGTGCAACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSFSFC*CNCFCL
Trigger: AAGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTACATTCAGCTGGGTaGCCATTCTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLHSAG*PFCLSW
Trigger: CCAAGACAGACAGAATGGGCACCCAGCTGAATGTAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTGGACAGAGTCATTTTaGCAATGCATAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICWTESF*QCIESK
Trigger: TTTGGATTCTATGCATTGGCAAAATGACTCTGTCCA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGGTCTTTATACCGTATaGTTTTCCCATCATCCATCG +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETGLYTV*FSHHPS
Trigger: CGATGGATGATGGGAAAAGCATACGGTATAAAGACC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTATGGCAAGCATACTTaGATAATTTGCAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICYGKHT*IICKQR
Trigger: CCTCTGTTTGCAAATTATGCAAGTATGCTTGCCATA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATATGGCAAGCATACTTaGATAATTTGCAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKYGKHT*IICKQR
Trigger: CCTCTGTTTGCAAATTATGCAAGTATGCTTGCCATA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCTCTGTATCTAGACCCTaGCGAAGCTCCTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFSVSRP*RSSLIL
Trigger: TAAAATCAAGGAGCTTCGGCAGGGTCTAGATACAGA...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTGCTGCTTTTTAAGTTaGTTTCGCAACTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRCCFLS*FRNLLE
Trigger: TTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGACAGTCTTAGCCATATaGTTAGAAAAGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETTVLAI*LEKRQD
Trigger: GTCCTGCCTCTTTTCTAAGCATATGGCTAAGACTGT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGACTTGGTTCAAAAGGTaGAACTTTTATATGACCTCA +
Preference number: 4 (lower is better)
Translates to: VCCEKSALHFGVWAPNVETWFKR*NFYMTS
Trigger: TGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACCTGTCCCATCAGCATaGATAGTATATGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPPVPSA*IVYVQS
Trigger: ACTTTGAACATATACTATCCATGCTGATGGGACAGG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACAGTTTTCCCAGTTGGTaGTTATCATACATTTTGACA +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHSFPSW*LSYILT
Trigger: TGTCAAAATGTATGATAACCACCAACTGGGAAAACT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACATAATGATATTCCTCTaGTTGCTTAAGATGGAATGC +
Preference number: 4 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHIMIFL*LLKMEC
Trigger: GCATTCCATCTTAAGCAACCAGAGGAATATCATTAT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTCTGTCTTCGTGTCTTaGGAAGAAATCCTACCATTT +
Preference number: 4 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASSVFVS*EEILPF
Trigger: AAATGGTAGGATTTCTTCCCAAGACACGAAGACAGA...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGATTACAGATATCAATaGAGTCATCCCGGTATGTCT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPDYRYQ*SHPGMS
Trigger: AGACATACCGGGATGACTCCATTGATATCTGTAATC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACTCTGCCAACTTGTATaGCAAAATAAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEALCQLV*QNKLFS
Trigger: GGAGAAAAGCTTATTTTGCCATACAAGTTGGCAGAG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAAGAGCTACAATGTCTaGGCGCATATGATCTGTATT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAKSYNV*AHMICI
Trigger: AATACAGATCATATGCGCCCAGACATTGTAGCTCTT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTTTCAAAATTGCACATaGCGCTGTATCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQFQNCT*RCIIMS
Trigger: GGACATGATGATACAGCGCCATGTGCAATTTTGAAA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAATCTCTAAGCTCCTCTaGTGGACTGGGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPISKLL*WTGCWR
Trigger: TCTCCAACACCCAGTCCACCAGAGGAGCTTAGAGAT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTTGATAGTCTGCTCTaGCGAATCCCAGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLDSLL*RIPVLP
Trigger: TGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGCATTTTACAAAATATaGTTCTGCTTGACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSAFYKI*FCLTKC
Trigger: ACACTTGGTCAAGCAGAACCATATTTTGTAAAATGC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCGCATTTTACAAAATATaGTTCTGCTTGACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LFALFRVEGSSADELRLVAFYKI*FCLTKC
Trigger: ACACTTGGTCAAGCAGAACCATATTTTGTAAAATGC...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCACGGGGAAGAAGTACATaGAAGTGGCTCACAAAATCC +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTARGRST*KWLTKS
Trigger: GGATTTTGTGAGCCACTTCCATGTACTTCTTCCCCG...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGATGCTTGTCTCAGATaGAGGAAATGCTGCCTACAC +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEDACLR*RKCCLH
Trigger: GTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCTCTCCATTTCTGCTaGATAACGATGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSLHFC*ITMAAA
Trigger: GGCTGCAGCCATCGTTATCCAGCAGAAATGGAGAGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTATACTTGTGTCTAGTTaGGAATTTGTTTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICILVSS*EFVFSG
Trigger: CCCACTGAAAACAAATTCCCAACTAGACACAAGTAT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAATACTTGTGTCTAGTTaGGAATTTGTTTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKILVSS*EFVFSG
Trigger: CCCACTGAAAACAAATTCCCAACTAGACACAAGTAT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTAAAATATCTGTTTGCTaGCGAATCTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICKISVC*RICSII
Trigger: GATGATGGAACAGATTCGCCAGCAAACAGATATTTT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGAGGAACTGTCTTTTTaGGCAAGAGCTGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETEELSF*ARAASF
Trigger: AAAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCCACAGGTTTCCATGCTaGTTCATCTTCTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFHRFPC*FIFFME
Trigger: CTCCATAAAGAAGATGAACCAGCATGGAAACCTGTG...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACTTGCGCTTAGCCTTTaGAGAAGGTTCTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLALSL*RRFFVL
Trigger: GAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGACACTTGCTATGATCTaGACAGAGTCATTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQTLAMI*TESFCQ
Trigger: TTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
3UTR CAA 72 bp CTGGAAGCTTTGTTCTTTAATGAGCCATGGGGTGATTaGTTCATCAAGCTGCTTTTGTGTAGCCATACAGTG +
Preference number: 4 (lower is better)
Translates to: LEALFFNEPWGD*FIKLLLCSHTV
Trigger: CACTGTATGGCTACACAAAAGCAGCTTGATGAACAAATCACCCCATGGCTCATTAAAGAACAAAGCTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGATTGTCCCTTCTaGAATAGCCCCAGGATATAT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPVDCPF*NSPRIY
Trigger: ATATATCCTGGGGCTATTTCAGAAGGGACAATCTAC...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGTCAAAGTCTTTCTGTTaGGGCTGTGGAAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVSKSFC*GCGRKP
Trigger: GGGTTTTCTTCCACAGCCTCAACAGAAAGACTTTGA...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp TTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGTTCATTATGAGAACCACTCTCTCCTaGAATCACGATGCACTGATT +
Preference number: 4 (lower is better)
Translates to: FTCSCQEVIEYMIVPFIMRTTLS*NHDALI
Trigger: AATCAGTGCATCGTGATTTCAGGAGAGAGTGGTTCT...CATAATGAACGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGAGAAAGTTTGTGCTTTaGGTCTTCCCAGAACCACTC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVRKFVL*VFPEPL
Trigger: GAGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp TTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGTTCATTATGAGAAAGTTTGTGCTTTaGGTCTTCCCAGAACCACTC +
Preference number: 4 (lower is better)
Translates to: FTCSCQEVIEYMIVPFIMRKFVL*VFPEPL
Trigger: GAGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCT...CATAATGAACGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLKMEC*SLIFTC
Trigger: GCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAAAGCAACCATGGCTCTaGAAAAAGCTCGGAGAATTG +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTKQPWL*KKLGEL
Trigger: CAATTCTCCGAGCTTTTTTCAGAGCCATGGTTGCTT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATTGCTTAATGATGCCTaGAACTGGGCACTGATGCTG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPLLNDA*NWALML
Trigger: CAGCATCAGTGCCCAGTTTCAGGCATCATTAAGCAA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAAATATGGTTCTGCTTaGCCAAGTGTTTCCATTAGC +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETKYGSA*PSVSIS
Trigger: GCTAATGGAAACACTTGGTCAAGCAGAACCATATTT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGTACCAAGACATCACTaGACCTTAAGGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEVPRHH*TLRAAF
Trigger: AAAAGCTGCCCTTAAGGTTCAGTGATGTCTTGGTAC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCACTTCAAGCAGTCCACTaGACTTTCACGGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPLQAVH*TFTANS
Trigger: CGAATTAGCCGTGAAAGTTCAGTGGACTGCTTGAAG...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACTCCTTCATCTGAAATaGCAGACTCTAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLLHLK*QTLVCS
Trigger: AGAGCAAACTAGAGTCTGTCATTTCAGATGAAGGAG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGAGGGCATTGTCCCGTaGATCAAATTTTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPEGIVP*IKFWTA
Trigger: AGCAGTCCAAAATTTGATTCACGGGACAATGCCCTC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCAATCTGATCTTTTCCTaGGCAGTGATACCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLNLIFS*AVIPSS
Trigger: ACTAGAAGGTATCACTGCTCAGGAAAAGATCAGATT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGCTTTTCAATTGTCTTaGAGGCTTTGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEAFQLS*RLCAPS
Trigger: AGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATTGAGGTATTTAAGCTaGGGAGAGAGGATGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPLRYLS*GERMAS
Trigger: AGAGGCCATCCTCTCTCCTCAGCTTAAATACCTCAA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCCTTTGGGGGTAAGTaGGCAGAGGAACTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSFGGK*AEELSF
Trigger: AAAAGACAGTTCCTCTGCTCACTTACCCCCAAAGGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTTTCAAAGAACACGGTaGCAGGTCGGTCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIFQRTR*QVGPLG
Trigger: CCCCAAAGGACCGACCTGTCACCGTGTTCTTTGAAA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTTAAGGCTTCTTTGCTaGCAAGGGGAATACTCATAT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETLRLLC*QGEYSY
Trigger: ATATGAGTATTCCCCTTGTCAGCAAAGAAGCCTTAA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCTCATCTTAGCTCTCTaGGGTCTTATATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLLILAL*GLISES
Trigger: AGATTCAGATATAAGACCTCAGAGAGCTAAGATGAG...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGGAGTGGCGAAACCTCTaGCTGGGTAGTAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGEWRNL*LGSRFH
Trigger: GTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTC...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAAAAGGAGGTGTTGGGTaGTATGCAGCTAATTCATCT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKKGGVG*YAANSS
Trigger: AGATGAATTAGCTGCATATCACCCAACACCTCCTTT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACATCGCCAATGCAGATaGATAAAAGCTGAAGATATT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPHRQCR*IKAEDI
Trigger: AATATCTTCAGCTTTTATTCATCTGCATTGGCGATG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCACCCAAATTGTCGAGATaGCAGCTCTGGATCATACTT +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAPKLSR*QLWIIL
Trigger: AAGTATGATCCAGAGCTGTCATCTCGACAATTTGGG...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCATATTCAAATTCTCTaGGCTATCAGCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETHIQIL*AISSPN
Trigger: ATTGGGACTGCTGATAGCTCAGAGAATTTGAATATG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR TCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCAGTTTTCTGGTCCCATaGGATGATGCCGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSSFLVP*DDAVLD
Trigger: GTCTAACACGGCATCATCTCATGGGACCAGAAAACT...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTACCTCTGCTGATGAACTaGGGCTTGTCTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLPLLMN*GLSSRN
Trigger: ATTCCTGGAAGACAAGCCTCAGTTCATCAGCAGAGG...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAGGAAAGCCATGGAGTaGGTATGTATGTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKERKAME*VCMFLF
Trigger: AAAAAGAAACATACATACTCACTCCATGGCTTTCCT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTACAAAGTGCCTATTaGTTGCATCCGGAATGTAAT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLQSAY*LHPECN
Trigger: ATTACATTCCGGATGCAATCAATAGGCACTTTGTAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGAGAGATTTTATGATTaGAGGGGGAGGCATACAGAA +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPERFYD*RGRHTE
Trigger: TTCTGTATGCCTCCCCCTTCAATCATAAAATCTCTC...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTCCTGAAATCACGATaGACTGATTCTTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLLKSR*TDSFCA
Trigger: AGCGCAAAAAGAATCAGTGCATCGTGATTTCAGGAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp CATGATAGTTCCGTTCATTATGCTCCTGATAAACGAGTCTGGACTTCTCCAGTACTCCTGAAATCACGATaGACTGATTCTTTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HDSSVHYAPDKRVWTSPVLLKSR*TDSFCA
Trigger: AGCGCAAAAAGAATCAGTGCATCGTGATTTCAGGAG...TACTGGAGAAGTCCAGACTCGTTTATCAGGAGCATAATGAACGGAACTATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR GCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAGGCACCAAGTACAGTaGCTGTTTCCTGGTAATTTA +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPRHQVQ*LFPGNL
Trigger: TAAATTACCAGGAAACAGGCACTGTACTTGGTGCCT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGCACTGTCACAGCCTCTaGCAACTTGTATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVHCHSL*QLVWQN
Trigger: ATTTTGCCATACAAGTTGGCAGAGGCTGTGACAGTG...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGAAAAGCTCGGAGAATTaGCCATCGGAAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVKSSEN*PSENSY
Trigger: GTAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCATACTTTTCAAAATTaGACATGGCGCTGTATCATC +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQHTFQN*TWRCII
Trigger: GATGATACAGCGCCATGTGCAATTTTGAAAAGTATG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCATACTTTTCAAAATTaGACATGGCGCTGTATCATC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEHTFQN*TWRCII
Trigger: GATGATACAGCGCCATGTGCAATTTTGAAAAGTATG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAATATCAAGCAAGGAGGTaGCACTTGATAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEYQARR*HLIVCS
Trigger: AGAGCAGACTATCAAGTGGCACCTCCTTGCTTGATA...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTGTTTCCATTAGCTTaGTTAATGATGCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAVFPLA*LMMPET
Trigger: AGTTTCAGGCATCATTAAGCAAGCTAATGGAAACAC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAACCCTGAACCATCGCTaGAACAATATGATTCTGCGG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPTLNHR*NNMILR
Trigger: CCGCAGAATCATATTGTTGCAGCGATGGTTCAGGGT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTTTGGGCTCTCTCCTaGTGCTTGTTTGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILWALS*CLFGDS
Trigger: GGAGTCACCAAACAAGCAGCAGGAGAGAGCCCAAAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTAGTGTATCCTTCTTaGTGTCTTCATTATCTAGGT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLVYPS*CLHYLG
Trigger: ACCTAGATAATGAAGACAGCAAGAAGGATACACTAG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTCTAAAGAGTCTTGCTaGTTTTTAAGTTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKESKESC*FLSCFR
Trigger: GCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR GCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGGGGAGGGCCCCACACTaGTCTCCACTCTTATCATTT +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGGRAPH*SPLLSF
Trigger: AAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCC...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGATTTGTTCATCAAGCTaGTTTTGTGTAGCCATACAG +
Preference number: 4 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQICSSS*FCVAIQ
Trigger: CTGTATGGCTACACAAAAGCAGCTTGATGAACAAAT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATACCCTGGTGTAGGATaGTCCTGGTTTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPYPGVG*SWFPFP
Trigger: TGGAAATGGAAACCAGGAGCATCCTACACCAGGGTA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAACTGGACAATCTGTTaGATTGAGAATCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKENWTIC*IENPFF
Trigger: GAAGAATGGATTCTCAATCCAACAGATTGTCCAGTT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACATCATTCGCTGAACTaGACAATCTGTTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPHHSLN*TICWIE
Trigger: CTCAATCCAACAGATTGTCCAGTTCAGCGAATGATG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCATTTTGCGCTGAAGCATaGCATGATAAGCTACATCAG +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPFCAEA*HDKLHQ
Trigger: CTGATGTAGCTTATCATGCCATGCTTCAGCGCAAAA...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp GCAAGTTGTAGGCGCTCAAAGTCATGTCTCAAATCTTCTCCTTCCACCGTGAAGATAATGATATTCCTCTaGTTGCTTAAGATGGAATGC +
Preference number: 4 (lower is better)
Translates to: ASCRRSKSCLKSSPSTVKIMIFL*LLKMEC
Trigger: GCATTCCATCTTAAGCAACCAGAGGAATATCATTAT...CTTCACGGTGGAAGGAGAAGATTTGAGACATGACTTTGAGCGCCTACAACTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGATCCTACCATTTCCATaGCAAGTTGTAGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVILPFP*QVVGAQ
Trigger: TTGAGCGCCTACAACTTGCCATGGAAATGGTAGGAT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTGATTTGTAGCCTGTaGAAAGTTGCTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLICSL*KVAFFI
Trigger: GATGAAGAAAGCAACTTTCCACAGGCTACAAATCAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAGGCTCCATCACGGCTaGAAATTCGATGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPRLHHG*KFDVRI
Trigger: AATTCTTACATCGAATTTCCAGCCGTGATGGAGCCT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATGGTGGACTGGGTGTTaGAGAAAGCTAAAACTATCC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTWWTGC*RKLKLS
Trigger: GGATAGTTTTAGCTTTCTCCAACACCCAGTCCACCA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTGGCTCACAAAATCCTaGAAAGAATATTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETWLTKS*KEYLEL
Trigger: CAGCTCCAAATATTCTTTCCAGGATTTTGTGAGCCA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCGGGGAAGAAGTACATaGAAGTGGCTCACAAAATCC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRRGRST*KWLTKS
Trigger: GGATTTTGTGAGCCACTTCCATGTACTTCTTCCCCG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAATTCCTCCAGAATCTCTaGATAATAACAGATGCTTGT +
Preference number: 4 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSEFLQNL*IITDAC
Trigger: ACAAGCATCTGTTATTATCCAGAGATTCTGGAGGAA...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGGAGTCTTTCAGCTGTaGTTTACAGGTAATAGACTC +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKGVFQL*FTGNRL
Trigger: GAGTCTATTACCTGTAAACCACAGCTGAAAGACTCC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTGACAGTACTAGATTaGCATGGACTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLTVLD*HGLPFL
Trigger: AAGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTGACAGTACTAGATTaGCATGGACTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLTVLD*HGLPFL
Trigger: AAGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGCTGTAAGACTGAGTTaGCCTAAAGTGTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETAVRLS*PKVFSF
Trigger: AAAAGAGAACACTTTAGGCCAACTCAGTCTTACAGC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAGACAGCACTTCTTATaGCAAGCATACTTGCATAAT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEARQHFL*QAYLHN
Trigger: ATTATGCAAGTATGCTTGCCATAAGAAGTGCTGTCT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGAATCAGTGACAACCTaGTCTTTGCCTTATTCTCAG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKESVTT*SLPYSQ
Trigger: CTGAGAATAAGGCAAAGACCAGGTTGTCACTGATTC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCAGGAGACGATGGACCTaGATAGTTTCCTCGACGAAT +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSRRRWT*IVSSTN
Trigger: ATTCGTCGAGGAAACTATCCAGGTCCATCGTCTCCT...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGGCAGCTCGGTAGAATaGAGATTTGGAATAAATCTG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKGSSVE*RFGINL
Trigger: CAGATTTATTCCAAATCTCCATTCTACCGAGCTGCC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
3UTR CAA 72 bp AATGAGCCATGGGGTGATTTGTTCATCAAGCTGCTTTaGTGTAGCCATACAGTGCATATTTTGAGTGACACA +
Preference number: 4 (lower is better)
Translates to: NEPWGDLFIKLL*CSHTVHILSDT
Trigger: TGTGTCACTCAAAATATGCACTGTATGGCTACACAAAAGCAGCTTGATGAACAAATCACCCCATGGCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAGAGCAGTAAGGTGGTaGATAAGAAAGTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPRAVRW*IRKFVL
Trigger: AAGCACAAACTTTCTTATTCACCACCTTACTGCTCT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCCTTCCCAAAACGACTTaGATTGTTATTATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLLPKTT*IVIMSC
Trigger: ACAGCTCATAATAACAATTCAAGTCGTTTTGGGAAG...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTCATCCCAGCTCTGTCTaGGGGGTTTCTTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCHPSSV*GVSLLS
Trigger: AGATAACAAAGAAACCCCTCAGACAGAGCTGGGATG...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGAAGGGTCTGAACCCTaGATTTCCAGAGATCCATAT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPEGSEP*ISRDPY
Trigger: ATATGGATCTCTGGAAATTCAGGGTTCAGACCCTTC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCCATCTGCGATCCTCTaGAGGAGAAATACCACCAAG +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGPSAIL*RRNTTK
Trigger: CTTGGTGGTATTTCTCCTTCAGAGGATCGCAGATGG...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAACTCCTTCATCTGAAATaGCAGACTCTAGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAELLHLK*QTLVCS
Trigger: AGAGCAAACTAGAGTCTGTCATTTCAGATGAAGGAG...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGTAGACTATTTGAAATaGAGGAGTCTTTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKVDYLK*RSLSAV
Trigger: CACAGCTGAAAGACTCCTTCATTTCAAATAGTCTAC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCTTTTCCTGAGCAGTaGTACCTTCTAGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSFPEQ*YLLVSL
Trigger: CAGGGAAACTAGAAGGTATCACTGCTCAGGAAAAGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCACTCTACTCTTTGCTTTaGCTGATAGGAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPLYSLL*LIGRWC
Trigger: GCACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAG...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAATGTGGCTGTGCAATCTaGAGTCTTGAATTCATTCAT +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKCGCAI*SLEFIH
Trigger: ATGAATGAATTCAAGACTTCAGATTGCACAGCCACA...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR TCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGTTCAAATGTCAGAAATaGGAGGGTCCCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLFKCQK*EGPSGQ
Trigger: CTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAA...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGAACAGTATGGCTACTaGCACTTCAGCCCATGCAAT +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLEQYGY*HFSPCN
Trigger: ATTGCATGGGCTGAAGTGTCAGTAGCCATACTGTTC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTATGGGAATGTGTGCTGTaGGAAGAGTGCTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLWECVL*EECSAF
Trigger: AAATGCAGAGCACTCTTCTCACAGCACACATTCCCA...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAATCAGTTCCGTGGGTaGGATAAATCATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETNQFRG*DKSFFL
Trigger: TAAGAAGAATGATTTATCTCACCCACGGAACTGATT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCATACAGTGCATATTTTaGGTGACACAAACTGCACTT +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLIQCIF*VTQTAL
Trigger: AAGTGCAGTTTGTGTCACTCAAAATATGCACTGTAT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp ATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGTTCATTTGCACTGATTCTTTTTaGGCTGAAGCATGGCATGAT +
Preference number: 4 (lower is better)
Translates to: IFTCSCQEVIEYMIVPFICTDSF*AEAWHD
Trigger: ATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCA...AATGAACGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR GCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAATTATGAGCTGTCTTTaGATTTCCAAAGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPIMSCL*ISKGLK
Trigger: CTTGAGGCCTTTGGAAATGCAAAGACAGCTCATAAT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAAGGCACCAAGTACAGTaGCTGTTTCCTGGTAATTTA +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAERHQVQ*LFPGNL
Trigger: TAAATTACCAGGAAACAGGCACTGTACTTGGTGCCT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCTCTCATCTTCACTTaGTCCTGCCAGGAGGTAATA +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSLIFT*SCQEVI
Trigger: TATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCACTGTCACAGCCTCTaGCAACTTGTATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRHCHSL*QLVWQN
Trigger: ATTTTGCCATACAAGTTGGCAGAGGCTGTGACAGTG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGCATCCCAGAGATAAATaGATTCTTGCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVHPRDK*ILAASQ
Trigger: CTGAGAAGCAGCAAGAATGCATTTATCTCTGGGATG...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGAAAAGCTCGGAGAATTaGCCATCGGAAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRKSSEN*PSENSY
Trigger: GTAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGAAGTGCTGTCGTTCCTaGTCCTTTAGAAAGACCATG +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRKCCRS*SFRKTM
Trigger: CATGGTCTTTCTAAAGGAGCAGGAACGACAGCACTT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAAGCAGATCTTGTAAGTaGTGTCGTTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSRSCK*CRSCSF
Trigger: AAAGGAGCAGGAACGACAGCACTTACAAGATCTGCT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAATCCTTCTGCACAGCTaGATCTCTGACTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLILLHS*ISDLLL
Trigger: CAGAAGCAAGTCAGAGATGCAGCTGTGCAGAAGGAT...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAAGCTAAATATAGCTTaGTCTAGTTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEKLNIA*SSSLIL
Trigger: GAGAATGAGAGAACTAGAGCAAGCTATATTTAGCTT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGTTCCATCCTTCAAATaGTCTGCACTGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPVPSFK*SALLVS
Trigger: TGAGACTAGCAGTGCAGAGCATTTGAAGGATGGAAC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATCTTTTTCATTCTGTTaGTGCAACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEASFSFC*CNCFCL
Trigger: AAGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR GCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAGAGTCATTTTGCCAATaGATAGAATCCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAESFCQ*IESKAT
Trigger: CGTGGCTTTGGATTCTATGCATTGGCAAAATGACTC...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR GCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAGGTCTTTATACCGTATaGTTTTCCCATCATCCATCG +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAGLYTV*FSHHPS
Trigger: CGATGGATGATGGGAAAAGCATACGGTATAAAGACC...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAGTTGCTTTCGCAACTTaGTGGAAGGTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLVAFAT*WKVQTC
Trigger: GCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAAC...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCTCTAAAGAGTCTTGCTaGTTTTTAAGTTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFSKESC*FLSCFR
Trigger: GCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGA...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGGGACTACAGAACCTTaGTGGACCACATCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLGTTEP*WTTSFQ
Trigger: CTGAAAAGATGTGGTCCAGCAAGGTTCTGTAGTCCC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCAAAGTGCCTATTGATTaGATCCGGAATGTAATCAGT +
Preference number: 4 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLKVPID*IRNVIS
Trigger: ACTGATTACATTCCGGATGCAATCAATAGGCACTTT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAATTATGAGCTGTCTTTaGATTTCCAAAGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPIMSCL*ISKGLG
Trigger: CCCGAGGCCTTTGGAAATGCAAAGACAGCTCATAAT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGACTGCCCTTCACAAATaGTTCTCACTTAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRTALHK*FSLNGE
Trigger: CTCCCCATTAAGTGAGAAGCATTTGTGAAGGGCAGT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACCTGTCCCATCAGCATaGATAGTATATGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPPVPSA*IVYVQS
Trigger: ACTTTGAACATATACTATCCATGCTGATGGGACAGG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp ATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGTTCATTTTTTGCGCTGAAGCATaGCATGATAAGCTACATCAG +
Preference number: 4 (lower is better)
Translates to: IFTCSCQEVIEYMIVPFIFCAEA*HDKLHQ
Trigger: CTGATGTAGCTTATCATGCCATGCTTCAGCGCAAAA...AATGAACGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGAAAGGCCTCAAGTACTaGTCCAGCTCCAAGAATAAT +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVKGLKY*SSSKNN
Trigger: ATTATTCTTGGAGCTGGACCAGTACTTGAGGCCTTT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAATAATGATATTCCTCTaGTTGCTTAAGATGGAATGC +
Preference number: 4 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAIMIFL*LLKMEC
Trigger: GCATTCCATCTTAAGCAACCAGAGGAATATCATTAT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGATTACAGATATCAATaGAGTCATCCCGGTATGTCT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPDYRYQ*SHPGMS
Trigger: AGACATACCGGGATGACTCCATTGATATCTGTAATC...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTCGTGAGAATTCCATaGGCTCTCTCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILVRIP*ALSRSL
Trigger: CAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGAGCTGTATCCTGATTaGCGAATTCGAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPELYPD*RIRTVS
Trigger: GGAAACAGTTCGAATTCGCCAATCAGGATACAGCTC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGGAGTCTTTCAGCTGTaGTTTACAGGTAATAGACTC +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEGVFQL*FTGNRL
Trigger: GAGTCTATTACCTGTAAACCACAGCTGAAAGACTCC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAGGAATTTGTTTTCAGTaGGTCTTGTTGGGGGATATA +
Preference number: 4 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKGICFQ*VLLGDI
Trigger: TATATCCCCCAACAAGACCCACTGAAAACAAATTCC...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCACACAGGTTTCCATGCTaGTTCATCTTCTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAHRFPC*FIFFME
Trigger: CTCCATAAAGAAGATGAACCAGCATGGAAACCTGTG...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGCAGTTCGGTCTTCACTaGTCAAACGGGACAGTTCAA +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLQFGLH*SNGTVQ
Trigger: TTGAACTGTCCCGTTTGACCAGTGAAGACCGAACTG...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACAGCAAACAATAGTTTaGTTTCCAGTAGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPQQTIV*FPVGQK
Trigger: CTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTTCCCAAAACGACTTaGATTGTTATTATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLPKTT*IVIMSC
Trigger: ACAGCTCATAATAACAATTCAAGTCGTTTTGGGAAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTTAAGATGGAATGCTaGTCTCTCATCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLKMEC*SLIFTC
Trigger: GCAAGTGAAGATGAGAGATCAGCATTCCATCTTAAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGCTATGTTGTGCCAGCTaGTACCTTCAGTTCTATATT +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVLCCAS*YLQFYI
Trigger: AATATAGAACTGAAGGTATCAGCTGGCACAACATAG...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACTATGTTGTGCCAGCTaGTACCTTCAGTTCTATATT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTLCCAS*YLQFYI
Trigger: AATATAGAACTGAAGGTATCAGCTGGCACAACATAG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGTCTTCATCCAAAAGATaGAGCAGTCCTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVSSSKR*SSPVGF
Trigger: AAAACCAACAGGACTGCTTCATCTTTTGGATGAAGA...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTAAGCAACCATGGCTCTaGAAAAAGCTCGGAGAATTG +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCKQPWL*KKLGEL
Trigger: CAATTCTCCGAGCTTTTTTCAGAGCCATGGTTGCTT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCATCGCTGCAACAATATaGTTCTGCGGAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIIAATI*FCGAPL
Trigger: AAGAGGTGCTCCGCAGAATCATATTGTTGCAGCGAT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGTAGACTATTTGAAATaGAGGAGTCTTTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEVDYLK*RSLSAV
Trigger: CACAGCTGAAAGACTCCTTCATTTCAAATAGTCTAC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAAATCTGATCTTTTCCTaGGCAGTGATACCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAENLIFS*AVIPSS
Trigger: ACTAGAAGGTATCACTGCTCAGGAAAAGATCAGATT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATTAAGGCTTCTTTGCTaGCAAGGGGAATACTCATAT +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTALRLLC*QGEYSY
Trigger: ATATGAGTATTCCCCTTGTCAGCAAAGAAGCCTTAA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAACAACGCTACTGTTATaGAACACAGAATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTATTLLL*NTEWSL
Trigger: AAGACTCCATTCTGTGTTTCATAACAGTAGCGTTGT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAATCTTCACTTGCTCCTaGCAGGAGGTAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPIFTCS*QEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTCTCTCATCTTCACTTaGTCCTGCCAGGAGGTAATA +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCSLIFT*SCQEVI
Trigger: TATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCACATTTAGAGCATTCATaGCCTGGAGATCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPHLEHS*PGDQKE
Trigger: CTCTTTCTGATCTCCAGGGCATGAATGCTCTAAATG...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTGTCAGTCTTGTCAGGTaGTTTAAAGAATTTACTTCT +
Preference number: 4 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLVSLVR*FKEFTS
Trigger: AGAAGTAAATTCTTTAAAGCACCTGACAAGACTGAC...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR GCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACTGGATAATAACAGATaGTTGTCTCAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTLDNNR*LSQMEE
Trigger: TTCCTCCATCTGAGACAAGCATCTGTTATTATCCAG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTATTGGAGAAGAGCAGCTaGACTAGCCATAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLLEKSS*TSHNKS
Trigger: GCTTTTGTTATGGCTAGTGCAGCTGCTCTTCTCCAA...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGTAGGCTTTCCATCTTaGTTGTATGCAAATAGCAGC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPVGFPS*LYANSS
Trigger: GCTGCTATTTGCATACAAGCAAGATGGAAAGCCTAC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGTTCCATCCTTCAAATaGTCTGCACTGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLVPSFK*SALLVS
Trigger: TGAGACTAGCAGTGCAGAGCATTTGAAGGATGGAAC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGCGATTAGTGTCTTCCTaGAGAGCAATCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLRLVSS*RAILTR
Trigger: TCTAGTCAGGATTGCTCTGCAGGAAGACACTAATCG...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAACTGGACAATCTGTTaGATTGAGAATCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPNWTIC*IENPFF
Trigger: GAAGAATGGATTCTCAATCCAACAGATTGTCCAGTT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTTTCTGTTGAGGCTGTaGAAGAAAACCCCGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCFLLRL*KKTPFH
Trigger: ATGGAACGGGGTTTTCTTCCACAGCCTCAACAGAAA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp GATGGAATGCTGATCTCTCATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATAAGTTTTCCCAGTTGGTaGTTATCATACATTTTGACA +
Preference number: 4 (lower is better)
Translates to: DGMLISHLHLLLPGGNRISFPSW*LSYILT
Trigger: TGTCAAAATGTATGATAACCACCAACTGGGAAAACT...TATTCTATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGATCAGCATTCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATT +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVPDKRV*TSPVDI
Trigger: AATATCTACTGGAGAAGTCCAGACTCGTTTATCAGG...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACCTGATAAACGAGTCTaGACTTCTCCAGTAGATATT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTPDKRV*TSPVDI
Trigger: AATATCTACTGGAGAAGTCCAGACTCGTTTATCAGG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGATTACAGATATCAATaGAGTCATCCCGGTATGTCT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTDYRYQ*SHPGMS
Trigger: AGACATACCGGGATGACTCCATTGATATCTGTAATC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGCTCTGCCAACTTGTATaGCAAAATAAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVLCQLV*QNKLFS
Trigger: GGAGAAAAGCTTATTTTGCCATACAAGTTGGCAGAG...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAAGGCTCCATCACGGCTaGAAATTCGATGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPRLHHG*KFDVRI
Trigger: AATTCTTACATCGAATTTCCAGCCGTGATGGAGCCT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATTTCAAAATTGCACATaGCGCTGTATCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTFQNCT*RCIIMS
Trigger: GGACATGATGATACAGCGCCATGTGCAATTTTGAAA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCAGAAAGAGGTGTTCTaGGATTTTTCCGGGTTATAC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRQKEVF*DFSGLY
Trigger: GTATAACCCGGAAAAATCCCAGAACACCTCTTTCTG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCCTGGAAAGAATATTTaGAGCTGTATCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRPGKNI*SCILIG
Trigger: GCCAATCAGGATACAGCTCCAAATATTCTTTCCAGG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCGATCCTCCAAGGATCTaGGTCTCTCTCTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIDPPRI*VSLLQA
Trigger: TGCTTGTAAGAGAGAGACCCAGATCCTTGGAGGATC...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGGAGGAACTGTCTTTTTaGGCAAGAGCTGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIREELSF*ARAASF
Trigger: AAAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTC...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGCTGTAAGACTGAGTTaGCCTAAAGTGTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTAVRLS*PKVFSF
Trigger: AAAAGAGAACACTTTAGGCCAACTCAGTCTTACAGC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGTTCTGGCCATTCCTCTaGGCCACAGGAAATTATTCC +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGFWPFL*ATGNYS
Trigger: GGAATAATTTCCTGTGGCCCAGAGGAATGGCCAGAA...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGAAATTTTGGGTGGCTaGAATGTTGTGTTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPEILGG*NVVFLN
Trigger: GTTAAGAAACACAACATTCCAGCCACCCAAAATTTC...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR CAA 72 bp CTTAACCTAGGTGGTAGTTCCAGGGTTGTGTTTACTTaGTGGTACTCCACTGAACTATACATTTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LNLGGSSRVVFT*WYSTELYIFAL
Trigger: CAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCTGGAACTACCACCTAGGTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCTTCATCCAAAAGATaGAGCAGTCCTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSSSKR*SSPVGF
Trigger: AAAACCAACAGGACTGCTTCATCTTTTGGATGAAGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGTTGTCTAGCAATGTTTaGTTTGTAGCCTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLSSNV*FVACGK
Trigger: CTTTCCACAGGCTACAAATCAAACATTGCTAGACAA...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTTTGGAGCTGTATCCTaGTTGGCGAATTCGAACTGT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIFGAVS*LANSNC
Trigger: ACAGTTCGAATTCGCCAATCAGGATACAGCTCCAAA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCACATCGCCAATGCAGATaGATAAAAGCTGAAGATATT +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAHRQCR*IKAEDI
Trigger: AATATCTTCAGCTTTTATTCATCTGCATTGGCGATG...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR TCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGAAGGCAAAGCAGGTTTaGGATAGTCCTTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVKAKQV*DSPFIS
Trigger: AGAAATAAAAGGACTATCTCAAACCTGCTTTGCCTT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTGCACTGATTCTTTTTaGGCTGAAGCATGGCATGAT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCCTDSF*AEAWHD
Trigger: ATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAATCTTCACTTGCTCCTaGCAGGAGGTAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLIFTCS*QEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTATCTTCACTTGCTCCTaGCAGGAGGTAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCIFTCS*QEVIEY
Trigger: GTATTCTATTACCTCCTGGCAGGAGCAAGTGAAGAT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR GCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGTGTTTCCATTAGCTTaGTTAATGATGCCTGAAACT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTVFPLA*LMMPET
Trigger: AGTTTCAGGCATCATTAAGCAAGCTAATGGAAACAC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCACAAAAGCATCCTTCTaGACAGCTGCATCTCTGACT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYITKASF*TAASLT
Trigger: AGTCAGAGATGCAGCTGTGCAGAAGGATGCTTTTGT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTTGGAGAAGAGCAGCTaGACTAGCCATAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILEKSS*TSHNKS
Trigger: GCTTTTGTTATGGCTAGTGCAGCTGCTCTTCTCCAA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTGATAGGAAGATGGTaGCACCAAACACTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILIGRW*HQTLSN
Trigger: ATTGGAGAGTGTTTGGTGGCACCATCTTCCTATCAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTATCTGTATCTAGACCCTaGCGAAGCTCCTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLSVSRP*RSSLIL
Trigger: TAAAATCAAGGAGCTTCGGCAGGGTCTAGATACAGA...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATCTAAAGAGTCTTGCTaGTTTTTAAGTTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTASKESC*FLSCFR
Trigger: GCGAAAGCAACTTAAAAAGCAGCAAGACTCTTTAGA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCATCCTACCATTTCCATaGCAAGTTGTAGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIILPFP*QVVGAQ
Trigger: TTGAGCGCCTACAACTTGCCATGGAAATGGTAGGAT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTCTGCCAACTTGTATaGCAAAATAAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLCQLV*QNKLFS
Trigger: GGAGAAAAGCTTATTTTGCCATACAAGTTGGCAGAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATTGATTTGTAGCCTGTaGAAAGTTGCTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTALICSL*KVAFFI
Trigger: GATGAAGAAAGCAACTTTCCACAGGCTACAAATCAA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGTTGATTTGTAGCCTGTaGAAAGTTGCTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVLICSL*KVAFFI
Trigger: GATGAAGAAAGCAACTTTCCACAGGCTACAAATCAA...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATTGATTTGTAGCCTGTaGAAAGTTGCTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTLICSL*KVAFFI
Trigger: GATGAAGAAAGCAACTTTCCACAGGCTACAAATCAA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAAAGAGCTACAATGTCTaGGCGCATATGATCTGTATT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPKSYNV*AHMICI
Trigger: AATACAGATCATATGCGCCCAGACATTGTAGCTCTT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGGAGCTGTATCCTGATTaGCGAATTCGAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGELYPD*RIRTVS
Trigger: GGAAACAGTTCGAATTCGCCAATCAGGATACAGCTC...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATGGCTCACAAAATCCTaGAAAGAATATTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPWLTKS*KEYLEL
Trigger: CAGCTCCAAATATTCTTTCCAGGATTTTGTGAGCCA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATTCCTCCAGAATCTCTaGATAATAACAGATGCTTGT +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTFLQNL*IITDAC
Trigger: ACAAGCATCTGTTATTATCCAGAGATTCTGGAGGAA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGGGAATTTGTTTTCAGTaGGTCTTGTTGGGGGATATA +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRGICFQ*VLLGDI
Trigger: TATATCCCCCAACAAGACCCACTGAAAACAAATTCC...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCGTTGTCACAAGAGTATaGGTGGACATAACACATTTG +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSVVTRV*VDITHL
Trigger: CAAATGTGTTATGTCCACCCATACTCTTGTGACAAC...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTTCTCTATGCAGCAATaGCCCTATCTAAGACTAGAG +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCFSMQQ*PYLRLE
Trigger: CTCTAGTCTTAGATAGGGCCATTGCTGCATAGAGAA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTCCAAGGAGAAATTTTaGGTGGCTGGAATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCSKEKF*VAGMLC
Trigger: ACACAACATTCCAGCCACCCAAAATTTCTCCTTGGA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR CAA 72 bp ATGAGACCTAATAGATCCATCTCCACAATCATCATTTaGCTGTTACCCTTTCAATACCCAATCAAATGTGGG +
Preference number: 4 (lower is better)
Translates to: MRPNRSISTIII*LLPFQYPIKCG
Trigger: CCCACATTTGATTGGGTATTGAAAGGGTAACAGCAAAATGATGATTGTGGAGATGGATCTATTAGGTCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTGCTACCATAATGGATTaGTCCATCAAGGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCATIMD*SIKVFL
Trigger: GAGAAAAACCTTGATGGATCAATCCATTATGGTAGC...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTTCCCAAAACGACTTaGATTGTTATTATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLPKTT*IVIMSC
Trigger: ACAGCTCATAATAACAATTCAAGTCGTTTTGGGAAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGCTATGTTGTGCCAGCTaGTACCTTCAGTTCTATATT +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLLCCAS*YLQFYI
Trigger: AATATAGAACTGAAGGTATCAGCTGGCACAACATAG...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR TCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTTGTCTAGCAATGTTTaGTTTGTAGCCTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCLSSNV*FVACGK
Trigger: CTTTCCACAGGCTACAAATCAAACATTGCTAGACAA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTCCCTCCCACAGAAAATaGGATGAGAGATTTTATGAT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCPSHRK*DERFYD
Trigger: ATCATAAAATCTCTCATCTCATTTTCTGTGGGAGGG...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCAGAAAATGGCCAAGTTaGGCAGCCACTTTACACAAA +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIRKWPS*AATLHK
Trigger: TTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAATTATGAGCTGTCTTTaGATTTCCAAAGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLIMSCL*ISKGLK
Trigger: CTTGAGGCCTTTGGAAATGCAAAGACAGCTCATAAT...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCATCCCAGAGATAAATaGATTCTTGCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIHPRDK*ILAASQ
Trigger: CTGAGAAGCAGCAAGAATGCATTTATCTCTGGGATG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCACATACTTTTCAAAATTaGACATGGCGCTGTATCATC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPHTFQN*TWRCII
Trigger: GATGATACAGCGCCATGTGCAATTTTGAAAAGTATG...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGTCAGTCTTGTCAGGTaGTTTAAAGAATTTACTTCT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEVSLVR*FKEFTS
Trigger: AGAAGTAAATTCTTTAAAGCACCTGACAAGACTGAC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAAAGCTAAATATAGCTTaGTCTAGTTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTKLNIA*SSSLIL
Trigger: GAGAATGAGAGAACTAGAGCAAGCTATATTTAGCTT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAATCTTTTTCATTCTGTTaGTGCAACTGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAESFSFC*CNCFCL
Trigger: AAGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGA...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGATAATGATATTCCTCTaGTTGCTTAAGATGGAATGC +
Preference number: 4 (lower is better)
Translates to: SKTRATANNSLVSSRPKVIMIFL*LLKMEC
Trigger: GCATTCCATCTTAAGCAACCAGAGGAATATCATTAT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATAATGATATTCCTCTaGTTGCTTAAGATGGAATGC +
Preference number: 4 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTIMIFL*LLKMEC
Trigger: GCATTCCATCTTAAGCAACCAGAGGAATATCATTAT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTTCTGTCTTCGTGTCTTaGGAAGAAATCCTACCATTT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCSVFVS*EEILPF
Trigger: AAATGGTAGGATTTCTTCCCAAGACACGAAGACAGA...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTAAGAGCTACAATGTCTaGGCGCATATGATCTGTATT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCKSYNV*AHMICI
Trigger: AATACAGATCATATGCGCCCAGACATTGTAGCTCTT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTATTTCAAAATTGCACATaGCGCTGTATCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLFQNCT*RCIIMS
Trigger: GGACATGATGATACAGCGCCATGTGCAATTTTGAAA...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCTTCCTCCAGAATCTCTaGATAATAACAGATGCTTGT +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSFLQNL*IITDAC
Trigger: ACAAGCATCTGTTATTATCCAGAGATTCTGGAGGAA...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGATACTTGTGTCTAGTTaGGAATTTGTTTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRILVSS*EFVFSG
Trigger: CCCACTGAAAACAAATTCCCAACTAGACACAAGTAT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAAAAATATCTGTTTGCTaGCGAATCTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPKISVC*RICSII
Trigger: GATGATGGAACAGATTCGCCAGCAAACAGATATTTT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATTGACAGTACTAGATTaGCATGGACTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPLTVLD*HGLPFL
Trigger: AAGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCTGCACTTTATACAGATaGTATCTTGTTACCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSCTLYR*YLVTPQ
Trigger: TTGAGGGGTAACAAGATACCATCTGTATAAAGTGCA...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTAGGAGAAATTTTGGGTaGCTGGAATGTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCRRNFG*LECCVS
Trigger: AGAAACACAACATTCCAGCCACCCAAAATTTCTCCT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCAATTTTTGTTTCTCGTaGGAATTCCATGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYINFCFS*EFHGLS
Trigger: AGAGAGCCCATGGAATTCTCACGAGAAACAAAAATT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCAAATATGGTTCTGCTTaGCCAAGTGTTTCCATTAGC +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIKYGSA*PSVSIS
Trigger: GCTAATGGAAACACTTGGTCAAGCAGAACCATATTT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR TCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGATGGAACCACAAATGTaGTGCATATTAAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGMEPQM*CILRAN
Trigger: GTTAGCCCTTAATATGCATCACATTTGTGGTTCCAT...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTATATGGCAAGCATACTTaGATAATTTGCAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLYGKHT*IICKQR
Trigger: CCTCTGTTTGCAAATTATGCAAGTATGCTTGCCATA...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGTGCTGCTTTTTAAGTTaGTTTCGCAACTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGCCFLS*FRNLLE
Trigger: TTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCA...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCTTGAGTGACACAAACTaGACTTTATACAGATGGTAT +
Preference number: 4 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSLSDTN*TLYRWY
Trigger: ATACCATCTGTATAAAGTGCAGTTTGTGTCACTCAA...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTCTGTCTTCGTGTCTTaGGAAGAAATCCTACCATTT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYISVFVS*EEILPF
Trigger: AAATGGTAGGATTTCTTCCCAAGACACGAAGACAGA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCAGAAGTACATGGAAGTaGCTCACAAAATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIRSTWK*LTKSWK
Trigger: TTTCCAGGATTTTGTGAGCCACTTCCATGTACTTCT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTATTCTTTAATGAGCCATaGGGTGATTTGTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLFFNEP*GDLFIK
Trigger: CTTGATGAACAAATCACCCCATGGCTCATTAAAGAA...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTTTACACAAATAGTTaGAGCAGAACAAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILYTNS*SRTRHL
Trigger: AAGGTGCCTTGTTCTGCTCCAACTATTTGTGTAAAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGTACAAAATATGGTTCTaGTTGACCAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLYKIWF*LTKCFH
Trigger: ATGGAAACACTTGGTCAAGCAGAACCATATTTTGTA...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTCTAAAATATCTGTTTaGTGGCGAATCTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYISKISV*WRICSI
Trigger: GATGGAACAGATTCGCCAGCAAACAGATATTTTAGA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR GCA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGAAGGAAATTACAAAGTaGCTATTGATTGCATCCGGA +
Preference number: 4 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGKEITK*LLIASG
Trigger: TCCGGATGCAATCAATAGGCACTTTGTAATTTCCTT...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CCA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTAGTTTTCCCAGTTGGTaGTTATCATACATTTTGACA +
Preference number: 4 (lower is better)
Translates to: RVVFTLWYSTELYIFALCSFPSW*LSYILT
Trigger: TGTCAAAATGTATGATAACCACCAACTGGGAAAACT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424560.2
3UTR CAA 72 bp TGTAGTCCACACCTTTCCCATAGTAAATACAAATACTaGGTTCAAAAGGTGCAACTTTTATATGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: CSPHLSHSKYKY*VQKVQLLYDLR
Trigger: TCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACTATGGGAAAGGTGTGGACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR GCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTACAAAATATGGTTCTaGTTGACCAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIYKIWF*LTKCFH
Trigger: ATGGAAACACTTGGTCAAGCAGAACCATATTTTGTA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CCA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCGCATTTTACAAAATATaGTTCTGCTTGACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIAFYKI*FCLTKC
Trigger: ACACTTGGTCAAGCAGAACCATATTTTGTAAAATGC...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS CCA 90 bp GCAGAAGAGGCCGAGGCCACCGAGGGTCGGACGGTTCCGGGAGGGTaGGCCCAGCAGCCTCAGGGTCCGGGCGAGCGGCCGCGGCGCATC +
Preference number: 5 (lower is better)
Translates to: AEEAEATEGRTVPGG*AQQPQGPGERPRRI
Trigger: GATGCGCCGCGGCCGCTCGCCCGGACCCTGAGGCTGCTGGGCCCACCCTCCCGGAACCGTCCGACCCTCGGTGGCCTCGGCCTCTTCTGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000566885.5
ENST00000567560.5
CDS GCA 90 bp CGCACCCCGCCCAGAGAGCACGCGTTGGACCGCCGCCTCAACCGCTaGCAGCGGCCGCCTCTGCCGGTGCAACTACTGCCTCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RTPPREHALDRRLNR*QRPPLPVQLLPPPP
Trigger: CGGCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000566885.5
ENST00000567560.5
CDS GCA 90 bp TCCGCCCCGCCCAGAGAGCACGCGTTGGACCGCCGCCTCAACCGCTaGCAGCGGCCGCCTCTGCCGGTGCAACTACTGCCTCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SAPPREHALDRRLNR*QRPPLPVQLLPPPP
Trigger: CGGCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS CCA 90 bp CCCCGCCCTGTCAGAGAGACTCCGCCCCGCCCAGAGAGCACGCGTTaGACCGCCGCCTCAACCGCTGCCAGCGGCCGCCTCTGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: PRPVRETPPRPESTR*TAASTAASGRLCRC
Trigger: GCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGCGGAGTCTCTCTGACAGGGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS GCA 90 bp CGTTGGACCGCCGCCTCAACCGCTGCCAGCGGCCGCCTCTGCCGGTaGAACTACTGCCTCCGCCGCCGCCTCTCGCAGTCCGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RWTAASTAASGRLCR*NYCLRRRLSQSGLS
Trigger: GGACAGCCCGGACTGCGAGAGGCGGCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000567560.5
CDS GCA 90 bp GCCGCCTCAACCGCTGCCAGCGGCCGCCTCTGCCGGTGCAACTACTaGCTCCGCCGCCGCCTCTCGCAGTCCGGGCTGTCCTGTACTCTC +
Preference number: 5 (lower is better)
Translates to: AASTAASGRLCRCNY*LRRRLSQSGLSCTL
Trigger: GAGAGTACAGGACAGCCCGGACTGCGAGAGGCGGCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000567560.5
CDS TCA 90 bp CGCTTTCCGGCCAACACAGAGGTGCCTGAAGGCTGGTTGGGGTGGTaGGGCCCGAGGCAGGTAAGAAGCCTCCTCCCCACTTCGGTTTGT +
Preference number: 5 (lower is better)
Translates to: RFPANTEVPEGWLGW*GPRQVRSLLPTSVC
Trigger: ACAAACCGAAGTGGGGAGGAGGCTTCTTACCTGCCTCGGGCCTCACCACCCCAACCAGCCTTCAGGCACCTCTGTGTTGGCCGGAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS CCA 90 bp GAGGCAGGTAAGAAGCCTCCTCCCCACTTCGGTTTGTCTCGGCAGTaGATCGCTCTCCCACCCACTCAGATTCTGGCGTATCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: EAGKKPPPHFGLSRQ*IALPPTQILAYPCS
Trigger: GGAGCACGGATACGCCAGAATCTGAGTGGGTGGGAGAGCGATCCACTGCCGAGACAAACCGAAGTGGGGAGGAGGCTTCTTACCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS CCA 90 bp TCGGTTTGTCTCGGCAGTGGATCGCTCTCCCACCCACTCAGATTCTaGCGTATCCGTGCTCCCTCCCGATTCTGGACCTGGATTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SVCLGSGSLSHPLRF*RIRAPSRFWTWILS
Trigger: GCTGAGAATCCAGGTCCAGAATCGGGAGGGAGCACGGATACGCCAGAATCTGAGTGGGTGGGAGAGCGATCCACTGCCGAGACAAACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS TCA 90 bp ACGATGGCTGCAGCCCGTAACTCCAAGTACCGCTGCCTCTCTAAGTaGGCACGCCAGGAAGCTTGGAGAAGAGCAGCTGCACTAGCCATA +
Preference number: 5 (lower is better)
Translates to: TMAAARNSKYRCLSK*ARQEAWRRAAALAI
Trigger: TATGGCTAGTGCAGCTGCTCTTCTCCAAGCTTCCTGGCGTGCTCACTTAGAGAGGCAGCGGTACTTGGAGTTACGGGCTGCAGCCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS TCA 90 bp TCCCTGTACTGGAAAGGGATGTCGCAAGGTTGGGGACGAAACCTCTaGGTTTGCGACCGTAGCTGTCGCTTTCCGGCCAACACAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SLYWKGMSQGWGRNL*VCDRSCRFPANTEV
Trigger: CACCTCTGTGTTGGCCGGAAAGCGACAGCTACGGTCGCAAACTCAGAGGTTTCGTCCCCAACCTTGCGACATCCCTTTCCAGTACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS-3UTR CAA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCGCAAGGAGGTGCCACTaGATAGTCTGCTCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCARRCH*IVCSGE
Trigger: TTCGCCAGAGCAGACTATCAAGTGGCACCTCCTTGC...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCGACAGTGCTGGGGAGTaGTCACAAGAGTATGGGTGG +
Preference number: 5 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGDSAGE*SQEYGW
Trigger: CCACCCATACTCTTGTGACAACTCCCCAGCACTGTC...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS GCA 90 bp AGATCCTCCAAGGATCTGGGTCTCTCTCTTACAAGCACATCTTCCTaGAAGTCCACACCACTCTGGCTTTGGGCTCTCTCCTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RSSKDLGLSLTSTSS*KSTPLWLWALSCCL
Trigger: CAAGCAGCAGGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTTGCAGGAAGATGTGCTTGTAAGAGAGAGACCCAGATCCTTGGAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS-3UTR CAA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCATCTCTCATCTTCACTaGCTCCTGCCAGGAGGTAAT +
Preference number: 5 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCISHLH*LLPGGN
Trigger: ATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGAT...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGGCAAGGAGGTGCCACTaGATAGTCTGCTCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRARRCH*IVCSGE
Trigger: TTCGCCAGAGCAGACTATCAAGTGGCACCTCCTTGC...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCCTTCTAGCAAGTGCTTaGGAAGGGCAGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGLLASA*EGQAWI
Trigger: AATCCAAGCCTGCCCTTCCAAAGCACTTGCTAGAAG...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCTTCTAGCAAGTGCTTaGGAAGGGCAGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGLLASA*EGQAWI
Trigger: AATCCAAGCCTGCCCTTCCAAAGCACTTGCTAGAAG...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGGGGGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCGCATACTTGCATAATTaGCAAACAGAGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: VGALVFHPRTSGPFVSLCAYLHN*QTEARS
Trigger: GGACCGAGCCTCTGTTTGCAAATTATGCAAGTATGC...GCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACATTGTCTTCCAGGAATTaGGTCTGGCCCAATGGTCCT +
Preference number: 5 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTLSSRN*VWPNGP
Trigger: AGGACCATTGGGCCAGACCAAATTCCTGGAAGACAA...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGGACCTCTGGCCCTTTaGTCTCTCTCTGCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHGPLAL*SLSARL
Trigger: GAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS GCA 90 bp ATCTGCTCAGTCAGTACTCTCTCCTCCTGCTGCATAGCTGCTTGCTaGTGTTCTGTGATGTCAGTCTCCATGGCTGCCTCACTAGTCAAG +
Preference number: 5 (lower is better)
Translates to: ICSVSTLSSCCIAAC*CSVMSVSMAASLVK
Trigger: CTTGACTAGTGAGGCAGCCATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS GCA 90 bp GTTCTCAATCTGCTCAGTCAGTACTCTCTCCTCCTGCTGCATAGCTaGTTGCTGCTGTTCTGTGATGTCAGTCTCCATGGCTGCCTCACT +
Preference number: 5 (lower is better)
Translates to: VLNLLSQYSLLLLHS*LLLFCDVSLHGCLT
Trigger: AGTGAGGCAGCCATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGATTGAGAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS-3UTR CAA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATGGGCTGTATCTCCCTTaGTGTTTTCAGAAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDGLYLP*CFQKPR
Trigger: TCTGGGCTTCTGAAAACACAAAGGGAGATACAGCCC...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS TCA 90 bp TGTGATGTCAGTCTCCATGGCTGCCTCACTAGTCAAGGTCTCCTCTaGGACATCAGACACAGAAGGCAACCGAACTACAACAGGAGACGA +
Preference number: 5 (lower is better)
Translates to: CDVSLHGCLTSQGLL*DIRHRRQPNYNRRR
Trigger: TCGTCTCCTGTTGTAGTTCGGTTGCCTTCTGTGTCTGATGTCTCAGAGGAGACCTTGACTAGTGAGGCAGCCATGGAGACTGACATCACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS GCA 90 bp AGTCTTTCTGTTGAGGCTGTGGAAGAAAACCCCGTTCCATCATCCTaGGACGTTCTTCTGTTACCCGTAGCCATGACTGCAGGCTACCAT +
Preference number: 5 (lower is better)
Translates to: SLSVEAVEENPVPSS*DVLLLPVAMTAGYH
Trigger: ATGGTAGCCTGCAGTCATGGCTACGGGTAACAGAAGAACGTCGCAGGATGATGGAACGGGGTTTTCTTCCACAGCCTCAACAGAAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
CDS-3UTR CAA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATATCTCTCATCTTCACTaGCTCCTGCCAGGAGGTAAT +
Preference number: 5 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHISHLH*LLPGGN
Trigger: ATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGAT...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGTCTCCTGCTGCTTGTTaGGTGACTCCTTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRSPAAC*VTPSSS
Trigger: ACTGCTTGAAGGAGTCACCAAACAAGCAGCAGGAGA...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCTTGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCATGACAGACTCTAGTTaGCTCTTTTGGCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GLSSRNLVWPNGPSIPRAMTDSS*LFWLSS
Trigger: TGAGGAAAGCCAAAAGAGCAAACTAGAGTCTGTCAT...GGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGGAGGCACTGAGGGCATaGTCCCGTGAATCAAATTTT +
Preference number: 5 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGEALRA*SRESNF
Trigger: AAAATTTGATTCACGGGACAATGCCCTCAGTGCCTC...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp TGTCTTCCAGGAATTTGGTCTGGCCCAATGGTCCTTCCATTCCCAGGGCCTCATGGCTTTTCAATTGTCTaGAAGGCTTTGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CLPGIWSGPMVLPFPGPHGFSIV*KALRSF
Trigger: GAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCC...ATGAGGCCCTGGGAATGGAAGGACCATTGGGCCAGACCAAATTCCTGGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTGAATCCAAAGCCACGTaGCTAATCTTCACACTTCGC +
Preference number: 5 (lower is better)
Translates to: LALLSLSARLIVGGLYLPESKAT*LIFTLR
Trigger: GCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTC...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTGCTGCATAGCTGCTaGCTGCTGTTCTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLLHSC*LLFCDV
Trigger: GACATCACAGAACAGCAGCAAGCAGCTATGCAGCAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCTGCTGCATAGCTGCTaGCTGCTGTTCTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: LFALFRVEGSSADELRLVLLHSC*LLFCDV
Trigger: GACATCACAGAACAGCAGCAAGCAGCTATGCAGCAG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS TCA 90 bp ATGAGCTGGAATCACATCTGTGCCTGCAAAGAGTGGCGAAACCTCTaGCTGGGTAGTAGGTTTCACTCTGGTAGTCTTCTTCTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: MSWNHICACKEWRNL*LGSRFHSGSLLLPL
Trigger: CAAGGGGAGAAGAAGACTACCAGAGTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTCTTTGCAGGCACAGATGTGATTCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS GCA 90 bp TTCTGTAGGTTCTCAATCTGCTCAGTCAGTACTCTCTCCTCCTGCTaGATAGCTGCTTGCTGCTGTTCTGTGATGTCAGTCTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: FCRFSICSVSTLSSC*IAACCCSVMSVSMA
Trigger: AGCCATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGATTGAGAACCTACAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS GCA 90 bp TCCTTCTGTAGGTTCTCAATCTGCTCAGTCAGTACTCTCTCCTCCTaGTGCATAGCTGCTTGCTGCTGTTCTGTGATGTCAGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: SFCRFSICSVSTLSS*CIAACCCSVMSVSM
Trigger: CATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGATTGAGAACCTACAGAAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS CCA 90 bp GCTGGAATCACATCTGTGCCTGCAAAGAGTGGCGAAACCTCTGACTaGGTAGTAGGTTTCACTCTGGTAGTCTTCTTCTCCCCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: AGITSVPAKSGETSD*VVGFTLVVFFSPCF
Trigger: GAAACAAGGGGAGAAGAAGACTACCAGAGTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTCTTTGCAGGCACAGATGTGATTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCACAGCCTCTGCCAACTaGTATGGCAAAATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGTASAN*YGKISF
Trigger: AAAGCTTATTTTGCCATACAAGTTGGCAGAGGCTGT...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCA +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPALSRS*LLVELA
Trigger: TGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGCTCTCTCCTGCTGCTaGTTTGGTGACTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTALSCC*FGDSFK
Trigger: CTTGAAGGAGTCACCAAACAAGCAGCAGGAGAGAGC...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCATCTTCACACTTCGCTaGCGCTTAGCCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPIFTLR*RLAFGE
Trigger: TTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGAT...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGCATACTTGCATAATTaGCAAACAGAGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPAYLHN*QTEARS
Trigger: GGACCGAGCCTCTGTTTGCAAATTATGCAAGTATGC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTCTGCTGCATAGCTGCTaGCTGCTGTTCTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICLLHSC*LLFCDV
Trigger: GACATCACAGAACAGCAGCAAGCAGCTATGCAGCAG...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTGGAAGGTTCAGACTaGCCAGCTGTCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLEGSD*PAVFRE
Trigger: CTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCCTGGAAGGTTCAGACTaGCCAGCTGTCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASLEGSD*PAVFRE
Trigger: CTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAG...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTTGTCTTCCAGGAATTaGGTCTGGCCCAATGGTCCT +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLSSRN*VWPNGP
Trigger: AGGACCATTGGGCCAGACCAAATTCCTGGAAGACAA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTGGACCACAATTAGGATaGACTATTGTGGACGAGGTG +
Preference number: 5 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSGPQLG*TIVDEV
Trigger: CACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTCACAGTGAGAAGCTaGGTCAAGGGAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLTVRS*VKGEKG
Trigger: CCCCTTCTCTCCCTTGACCAAGCTTCTCACTGTGAG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561618.5
CDS GCA 90 bp GAAAGAGAAGAAAATGAGAAAGCTGGCGACGTGACTAACACACTGTaGAGGGAAGTGCTCTACAACTACTGGCATGCAGTGACCGTCAAG +
Preference number: 5 (lower is better)
Translates to: EREENEKAGDVTNTL*REVLYNYWHAVTVK
Trigger: CTTGACGGTCACTGCATGCCAGTAGTTGTAGAGCACTTCCCTGCACAGTGTGTTAGTCACGTCGCCAGCTTTCTCATTTTCTTCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS-3UTR CAA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTAAGAAAGTTTGTGCTTaGAGTCTTCCCAGAACCACT +
Preference number: 5 (lower is better)
Translates to: LALLSLSARLIVGGLYLPKKVCA*SLPRTT
Trigger: AGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCTT...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCTCCTGCTGCTTGTTaGGTGACTCCTTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSPAAC*VTPSSS
Trigger: ACTGCTTGAAGGAGTCACCAAACAAGCAGCAGGAGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGCTCTCTCCTGCTGCTaGTTTGGTGACTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQALSCC*FGDSFK
Trigger: CTTGAAGGAGTCACCAAACAAGCAGCAGGAGAGAGC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTCTCTCCTGCTGCTaGTTTGGTGACTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAALSCC*FGDSFK
Trigger: CTTGAAGGAGTCACCAAACAAGCAGCAGGAGAGAGC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGAAGTTCCAAGCTTCCTaGAGAGCTCTCACTATCAGG +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEKFQAS*RALTIR
Trigger: CCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACTT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCTCTTTTTCATTCTGTaGCTGCAACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGLFFIL*LQLFLP
Trigger: AGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGAG...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGGCTTTTCAATTGTCTaGAAGGCTTTGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSGFSIV*KALRSF
Trigger: GAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGTCTCTACTCTTTGCTTaGACTGATAGGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGSLLFA*TDRKMV
Trigger: CACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAGA...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCAGAGGAACTGTCTTTTaGGGCAAGAGCTGCATCTTT +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPRGTVF*GKSCIF
Trigger: AAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTCT...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCGTCTTGGATAATTCCTaGACAGTACTAGATTGGCAT +
Preference number: 5 (lower is better)
Translates to: RVLAVGWRCSLGPQFFCGVLDNS*TVLDWH
Trigger: ATGCCAATCTAGTACTGTCAAGGAATTATCCAAGAC...GCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp ATCTTCCAGCAGGGTAAGTGCTCTGGCAGGTTTCCAAAGCATGAGAAGGTGGGGCCCATTCTGTCTGTCTaGGATAATTCCTTGACAGTA +
Preference number: 5 (lower is better)
Translates to: IFQQGKCSGRFPKHEKVGPILSV*DNSLTV
Trigger: TACTGTCAAGGAATTATCCAAGACAGACAGAATGGG...CCCCACCTTCTCATGCTTTGGAAACCTGCCAGAGCACTTACCCTGCTGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGGCTCAAAGGAGGTGTaGGGTGATATGCAGCTAATT +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSGSKEV*GDMQLI
Trigger: AATTAGCTGCATATCACCCAACACCTCCTTTGAGCC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACAAACACTTTAAAAGTGTaGACCCAAACTCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTNTLKV*TQTLTG
Trigger: TCCAGTGAGAGTTTGGGTCAACACTTTTAAAGTGTT...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGCATACTTGCATAATTaGCAAACAGAGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSAYLHN*QTEARS
Trigger: GGACCGAGCCTCTGTTTGCAAATTATGCAAGTATGC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCCCCTGCCGAAGCTCCTaGATTTTATTAGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: LFALFRVEGSSADELRLVPCRSS*ILLVEP
Trigger: TGGTTCGACTAATAAAATCAAGGAGCTTCGGCAGGG...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTGTGACAACCTGGTCTTaGCCTTATTCTCAGCAAATT +
Preference number: 5 (lower is better)
Translates to: LALLSLSARLIVGGLYLPVTTWS*PYSQQI
Trigger: AATTTGCTGAGAATAAGGCAAAGACCAGGTTGTCAC...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTACGCCCCTTTCCCATaGATCTACGAATCAGTGACA +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHYAPFP*IYESVT
Trigger: TGTCACTGATTCGTAGATCAATGGGAAAGGGGCGTA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTGCTGCATAGCTGCTaGCTGCTGTTCTGTGATGTC +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLLHSC*LLFCDV
Trigger: GACATCACAGAACAGCAGCAAGCAGCTATGCAGCAG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAGTTGCTTTCGCAACTaGCTGGAAGGTTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSCFRN*LEGSDL
Trigger: CAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACAGTTGCTTTCGCAACTaGCTGGAAGGTTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHSCFRN*LEGSDL
Trigger: CAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATTGCCCTTTTCCGGGTaGAAGGTTCCTCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEALPFSG*KVPLLM
Trigger: CATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATTGCCCTTTTCCGGGTaGAAGGTTCCTCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLPFSG*KVPLLM
Trigger: CATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGGACCACAATTAGGATaGACTATTGTGGACGAGGTG +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSGPQLG*TIVDEV
Trigger: CACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTATGCAGACACAGCGTTaGGTTCTGAAGGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: PQREGPTLLSTLIILWLSMQTQR*VLKVFK
Trigger: CTTAAAAACCTTCAGAACCAAACGCTGTGTCTGCAT...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS TCA 90 bp CTTAAGCGATTTTCCAGAGCCATTCGGGGCCACAGCATCATTCGCTaGACTGGACAATCTGTTGGATTGAGAATCCATTCTTCTCCACCA +
Preference number: 5 (lower is better)
Translates to: LKRFSRAIRGHSIIR*TGQSVGLRIHSSPP
Trigger: TGGTGGAGAAGAATGGATTCTCAATCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTGGCCCCGAATGGCTCTGGAAAATCGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000569314.1
CDS TCA 90 bp CTGAACCATCGCTGCAACAATATGATTCTGCGGAGCACCTCTTGGTaGAGCAGATCTTGTAAGTGCTGTCGTTCCTGCTCCTTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: LNHRCNNMILRSTSW*SRSCKCCRSCSFRK
Trigger: CTTTCTAAAGGAGCAGGAACGACAGCACTTACAAGATCTGCTTCACCAAGAGGTGCTCCGCAGAATCATATTGTTGCAGCGATGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 90 bp TCAGAACTGCAGACCACCATTTCCTTCATAGTTCCATCCTTCAAATaGTCTGCACTGCTAGTCTCATTTGAGGCACTGAGGGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: SELQTTISFIVPSFK*SALLVSFEALRALS
Trigger: GGACAATGCCCTCAGTGCCTCAAATGAGACTAGCAGTGCAGAGCATTTGAAGGATGGAACTATGAAGGAAATGGTGGTCTGCAGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 90 bp GCGATTTTCCAGAGCCATTCGGGGCCACAGCATCATTCGCTGAACTaGACAATCTGTTGGATTGAGAATCCATTCTTCTCCACCAAATTC +
Preference number: 5 (lower is better)
Translates to: AIFQSHSGPQHHSLN*TICWIENPFFSTKF
Trigger: GAATTTGGTGGAGAAGAATGGATTCTCAATCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTGGCCCCGAATGGCTCTGGAAAATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000569314.1
CDS CCA 90 bp CAAAGCCACGTTGCTAATCTTCACACTTCGCTTGCGCTTAGCCTTTaGAGAAGGTTCTTTGTTCTCTTTGAATTCCTTCCGGCAACTGCC +
Preference number: 5 (lower is better)
Translates to: QSHVANLHTSLALSL*RRFFVLFEFLPATA
Trigger: GGCAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAGCAACGTGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 90 bp ATTCAGACTCCATATTCAAATTCTCTGAGCTATCAGCAGTCCCAATaGAGGCCTCAGACTCAAGGGTTTCATCATCAGAGGCACGGGGTT +
Preference number: 5 (lower is better)
Translates to: IQTPYSNSLSYQQSQ*RPQTQGFHHQRHGV
Trigger: AACCCCGTGCCTCTGATGATGAAACCCTTGAGTCTGAGGCCTCCATTGGGACTGCTGATAGCTCAGAGAATTTGAATATGGAGTCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS CCA 90 bp CCTATGCTGAAACTGGTGCCCTCCTATTCAAGATCCATATGTAGCTaGCATACAATCAGGTCTGGGGTTGTCAGGTGTACTTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PMLKLVPSYSRSICS*HTIRSGVVRCTSLP
Trigger: AGGAAGAGAAGTACACCTGACAACCCCAGACCTGATTGTATGCCAGCTACATATGGATCTTGAATAGGAGGGCACCAGTTTCAGCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAAAAAGCTCGGAGAATaGCCCATCGGAAAACAGCTA +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSKKLGE*PIGKQL
Trigger: TAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTTT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCTCTAGTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTGTTTCTTTGGATACTaGTGTCTAGTTGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: GSSIPSQDLWPFCLSLQGCFFGY*CLVGNL
Trigger: CAAATTCCCAACTAGACACAAGTATCCAAAGAAACA...GCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATACTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTTGCTGCAACTGTTTTaGCCTTTCTTCCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSLLQLF*PFFLLS
Trigger: ACTGAGAAGGAAGAAAGGCAAAAACAGTTGCAGCAA...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGTTGCTGCAACTGTTTTaGCCTTTCTTCCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRLLQLF*PFFLLS
Trigger: ACTGAGAAGGAAGAAAGGCAAAAACAGTTGCAGCAA...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTCTCTTTTTCATTCTGTaGCTGCAACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PQREGPTLLSTLIILWLSLFFIL*LQLFLP
Trigger: AGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGAG...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTCTCTACTCTTTGCTTaGACTGATAGGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPSLLFA*TDRKMV
Trigger: CACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAGA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGGCTCAAAGGAGGTGTaGGGTGATATGCAGCTAATT +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICGSKEV*GDMQLI
Trigger: AATTAGCTGCATATCACCCAACACCTCCTTTGAGCC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACGGTTCTTTGTTCTCTTaGAATTCCTTCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHGSLFS*NSFRQL
Trigger: CAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAACC...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTATCTTCACACTTCGCTaGCGCTTAGCCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICIFTLR*RLAFGE
Trigger: TTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGAT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CCTCAAAGGGAGGGCCCCACACTGCTCTCCACTCTTATCATTTTGTGGCTCTCTAACACTTTAAAAGTGTaGACCCAAACTCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: PQREGPTLLSTLIILWLSNTLKV*TQTLTG
Trigger: TCCAGTGAGAGTTTGGGTCAACACTTTTAAAGTGTT...AGAGAGCCACAAAATGATAAGAGTGGAGAGCAGTGTGGGGCCCTCCCTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGTCTTTCTTTCTGTTTTaGGCACCTTTGTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVESFFLF*APLWLC
Trigger: GCACAGCCACAAAGGTGCCAAAAACAGAAAGAAAGA...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTCTTTCTTTCTGTTTTaGGCACCTTTGTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSFFLF*APLWLC
Trigger: GCACAGCCACAAAGGTGCCAAAAACAGAAAGAAAGA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAGTTTTTCTGCGGCCAGACATTATGGCAAGCATACTaGCATAATTTGCAAACAGAG +
Preference number: 5 (lower is better)
Translates to: LAVGWRCSLGPQFFCGQTLWQAY*HNLQTE
Trigger: CTCTGTTTGCAAATTATGCAAGTATGCTTGCCATAA...TGTCTGGCCGCAGAAAAACTGTGGACCCAGACTGCACCTCCAACCAACAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAAGGTCATGAGAGGATaGGGCAAATCTCGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKKVMRG*GKSRSH
Trigger: ATGGCTTCGAGATTTGCCCAATCCTCTCATGACCTT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTAGTATACACCACGGATaGTCTCCTTCCTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSIHHG*SPSSPE
Trigger: TTCAGGAGAGGAAGGAGACAATCCGTGGTGTATACT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAAGTATACACCACGGATaGTCTCCTTCCTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKSIHHG*SPSSPE
Trigger: TTCAGGAGAGGAAGGAGACAATCCGTGGTGTATACT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTACGCCCCTTTCCCATaGATCTACGAATCAGTGACA +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICYAPFP*IYESVT
Trigger: TGTCACTGATTCGTAGATCAATGGGAAAGGGGCGTA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTGTCTTCCAGGAATTaGGTCTGGCCCAATGGTCCT +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLSSRN*VWPNGP
Trigger: AGGACCATTGGGCCAGACCAAATTCCTGGAAGACAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACAAATTCAGGTTTTGTTaGGGGCTGGGAATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHKFRFC*GLGMCA
Trigger: AGCACACATTCCCAGCCCCAAACAAAACCTGAATTT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTGAGCCATGGGGTGATTaGTTCATCAAGCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICEPWGD*FIKLLL
Trigger: CAAAAGCAGCTTGATGAACAAATCACCCCATGGCTC...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCAAGAAAGTTTGTGCTTaGAGTCTTCCCAGAACCACT +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSKKVCA*SLPRTT
Trigger: AGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCTT...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGGTAGCCTGTGGAAAGTaGCTTTCTTCATCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEVACGK*LSSSKR
Trigger: TCTTTTGGATGAAGAAAGCAACTTTCCACAGGCTAC...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCGTAGCCTGTGGAAAGTaGCTTTCTTCATCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: LFALFRVEGSSADELRLVVACGK*LSSSKR
Trigger: TCTTTTGGATGAAGAAAGCAACTTTCCACAGGCTAC...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCGAGATAAATGCATTCTaGCTGCTTCTCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSEINAF*LLLRRA
Trigger: AGCTCTTCTGAGAAGCAGCAAGAATGCATTTATCTC...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCCATACTTTTCAAAATaGCACATGGCGCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPPYFSK*HMALYH
Trigger: ATGATACAGCGCCATGTGCAATTTTGAAAAGTATGG...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGCAAGGAGGTGCCACTaGATAGTCTGCTCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEARRCH*IVCSGE
Trigger: TTCGCCAGAGCAGACTATCAAGTGGCACCTCCTTGC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCTCCTGGAAAGAATATTaGGAGCTGTATCCTGATTGG +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSSWKEY*ELYPDW
Trigger: CCAATCAGGATACAGCTCCAAATATTCTTTCCAGGA...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GTATTCCATCCCAGGACCTCTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTATCCAACTTCTGGCTTaGTTTCTCTTAGCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: VFHPRTSGPFVSLCKAHSIQLLA*FLLAFV
Trigger: AACAAAGGCTAAGAGAAACAAAGCCAGAAGTTGGAT...ACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAGAGGTCCTGGGATGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAAGTTCCAAGCTTCCTaGAGAGCTCTCACTATCAGG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQKFQAS*RALTIR
Trigger: CCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACTT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAAAGTTCCAAGCTTCCTaGAGAGCTCTCACTATCAGG +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPKFQAS*RALTIR
Trigger: CCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACTT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGATGACAGACTCTAGTTaGCTCTTTTGGCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEMTDSS*LFWLSS
Trigger: TGAGGAAAGCCAAAAGAGCAAACTAGAGTCTGTCAT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCGAGGCACTGAGGGCATaGTCCCGTGAATCAAATTTT +
Preference number: 5 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASEALRA*SRESNF
Trigger: AAAATTTGATTCACGGGACAATGCCCTCAGTGCCTC...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGGCTTTTCAATTGTCTaGAAGGCTTTGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRGFSIV*KALRSF
Trigger: GAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCC...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCTCTCTACTCTTTGCTTaGACTGATAGGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LFALFRVEGSSADELRLVSLLFA*TDRKMV
Trigger: CACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAGA...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGATCTTCACACTTCGCTaGCGCTTAGCCTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRIFTLR*RLAFGE
Trigger: TTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGAT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCTGTTTTTGGCACCTTaGTGGCTGTGCAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLFLAP*WLCNLK
Trigger: CTTCAGATTGCACAGCCACAAAGGTGCCAAAAACAG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCTGTTTTTGGCACCTTaGTGGCTGTGCAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLFLAP*WLCNLK
Trigger: CTTCAGATTGCACAGCCACAAAGGTGCCAAAAACAG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACTGTTTTTGGCACCTTaGTGGCTGTGCAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEALFLAP*WLCNLK
Trigger: CTTCAGATTGCACAGCCACAAAGGTGCCAAAAACAG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCCCTGCCGAAGCTCCTaGATTTTATTAGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQPCRSS*ILLVEP
Trigger: TGGTTCGACTAATAAAATCAAGGAGCTTCGGCAGGG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp TTTTGGAGTATGGGCTCCAAATGTGGAGCTGCCCCACTGCTGCCATGCAGAGATCAAATCTCGAAGCCATaGTTTGAATACACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: FWSMGSKCGAAPLLPCRDQISKP*FEYTCN
Trigger: ATTGCAAGTGTATTCAAACAATGGCTTCGAGATTTG...ATCTCTGCATGGCAGCAGTGGGGCAGCTCCACATTTGGAGCCCATACTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGAAGGTCATGAGAGGATaGGGCAAATCTCGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRKVMRG*GKSRSH
Trigger: ATGGCTTCGAGATTTGCCCAATCCTCTCATGACCTT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAAAAGGTCATGAGAGGATaGGGCAAATCTCGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSEKVMRG*GKSRSH
Trigger: ATGGCTTCGAGATTTGCCCAATCCTCTCATGACCTT...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAAGGTCATGAGAGGATaGGGCAAATCTCGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAKVMRG*GKSRSH
Trigger: ATGGCTTCGAGATTTGCCCAATCCTCTCATGACCTT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAAGTATACACCACGGATaGTCTCCTTCCTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPSIHHG*SPSSPE
Trigger: TTCAGGAGAGGAAGGAGACAATCCGTGGTGTATACT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACATGAGTTCGGGAGAGTaGATCAATCACAGAGTATAC +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHMSSGE*INHRVY
Trigger: GTATACTCTGTGATTGATCAACTCTCCCGAACTCAT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp CTGGCCCTTTTGTCTCTCTCTGCAAGGCTCATAGTTGGAGGGCTGTATCTCCCTTCTTTGAGACGAGCCTaGTATTTATTCATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LALLSLSARLIVGGLYLPSLRRA*YLFICS
Trigger: GGAACAAATGAATAAATACAAGGCTCGTCTCAAAGA...AGGGAGATACAGCCCTCCAACTATGAGCCTTGCAGAGAGAGACAAAAGGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAGTTGCTTTCGCAACTaGCTGGAAGGTTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQSCFRN*LEGSDL
Trigger: CAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACTTGCTGCTTTTTAAGTaGCTTTCGCAACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLLLFK*LSQLAG
Trigger: TCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAATTGCCCTTTTCCGGGTaGAAGGTTCCTCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLPFSG*KVPLLM
Trigger: CATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAA...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGGACCACAATTAGGATaGACTATTGTGGACGAGGTG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQGPQLG*TIVDEV
Trigger: CACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTGGGACTACAGAACCTaGCTGGACCACATCTTTTCA +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEWDYRT*LDHIFS
Trigger: TGAAAAGATGTGGTCCAGCAAGGTTCTGTAGTCCCA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCGTGGACATAACACATTaGTCCATACAGAATGATGCA +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPVDITH*SIQNDA
Trigger: TGCATCATTCTGTATGGACAAATGTGTTATGTCCAC...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS TCA 90 bp TTCGGGGCCACAGCATCATTCGCTGAACTGGACAATCTGTTGGATTaGGAATCCATTCTTCTCCACCAAATTCCTTTACCTCTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: FGATASFAELDNLLD*ESILLHQIPLPLLE
Trigger: TTCTAGCAGAGGTAAAGGAATTTGGTGGAGAAGAATGGATTCTCAATCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTGGCCCCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000569314.1
CDS GCA 90 bp CAGAATCTCTGGATAATAACAGATGCTTGTCTCAGATGGAGGAAATaGTGCCTACACAGCAAGACCCTGAACCATCGCTGCAACAATATG +
Preference number: 5 (lower is better)
Translates to: QNLWIITDACLRWRK*CLHSKTLNHRCNNM
Trigger: CATATTGTTGCAGCGATGGTTCAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATCTGTTATTATCCAGAGATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 90 bp TCTCTCCTGAAATCACGATGCACTGATTCTTTTTGCGCTGAAGCATaGCATGATAAGCTACATCAGCCACAGCATAAATGTGGGGCTCAA +
Preference number: 5 (lower is better)
Translates to: SLLKSRCTDSFCAEA*HDKLHQPQHKCGAQ
Trigger: TTGAGCCCCACATTTATGCTGTGGCTGATGTAGCTTATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCATCGTGATTTCAGGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000568438.1
CDS-3UTR CAA 90 bp GCAAGTTGTAGGCGCTCAAAGTCATGTCTCAAATCTTCTCCTTCCACCGTGAAGAAGAAAGTTTGTGCTTaGAGTCTTCCCAGAACCACT +
Preference number: 5 (lower is better)
Translates to: ASCRRSKSCLKSSPSTVKKKVCA*SLPRTT
Trigger: AGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCTT...CTTCACGGTGGAAGGAGAAGATTTGAGACATGACTTTGAGCGCCTACAACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTATCTGTCTTCGTGTCTaGGGAAGAAATCCTACCATT +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICICLRV*GRNPTI
Trigger: AATGGTAGGATTTCTTCCCAAGACACGAAGACAGAT...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCA +
Preference number: 5 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLALSRS*LLVELA
Trigger: TGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGC...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACCTTGTAGTGTCAGTCTaGTCAGGTGCTTTAAAGAAT +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHLVVSV*SGALKN
Trigger: ATTCTTTAAAGCACCTGACAAGACTGACACTACAAG...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAATCTCCTGCTGCTTGTTaGGTGACTCCTTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKSPAAC*VTPSSS
Trigger: ACTGCTTGAAGGAGTCACCAAACAAGCAGCAGGAGA...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTCTTTTTCATTCTGTaGCTGCAACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLFFIL*LQLFLP
Trigger: AGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GCGGCATCACTTTGTGGTGACATAACTTTACCATGCAGAGGGCCAGTGAGAACAATTGTCTTGAAGGCTTaGCGCTCCTTCTCTAAAATA +
Preference number: 5 (lower is better)
Translates to: AASLCGDITLPCRGPVRTIVLKA*RSFSKI
Trigger: TATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAAT...TGTTCTCACTGGCCCTCTGCATGGTAAAGTTATGTCACCACAAAGTGATGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAAGAGGAACTGTCTTTTaGGGCAAGAGCTGCATCTTT +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEARGTVF*GKSCIF
Trigger: AAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTCT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGGTCTTGGATAATTCCTaGACAGTACTAGATTGGCAT +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEVLDNS*TVLDWH
Trigger: ATGCCAATCTAGTACTGTCAAGGAATTATCCAAGAC...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGAGGGGAATACTCATATaGTCCTTTGGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVERGILI*SFGVKK
Trigger: TTTCTTCACTCCAAAGGACAATATGAGTATTCCCCT...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACTGTTTAAGGCTTCTTaGCTGACAAGGGGAATACTC +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEALFKAS*LTRGIL
Trigger: GAGTATTCCCCTTGTCAGCAAAGAAGCCTTAAACAG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCTGTTTAAGGCTTCTTaGCTGACAAGGGGAATACTC +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRLFKAS*LTRGIL
Trigger: GAGTATTCCCCTTGTCAGCAAAGAAGCCTTAAACAG...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCTTGGTAATCTCTCCTaGAGACATAGTCTTATGAAG +
Preference number: 5 (lower is better)
Translates to: EAGPQLGLTIVDEVMKRSLGNLS*RHSLMK
Trigger: CTTCATAAGACTATGTCTCAAGGAGAGATTACCAAG...GCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGGCTCAAAGGAGGTGTaGGGTGATATGCAGCTAATT +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETGSKEV*GDMQLI
Trigger: AATTAGCTGCATATCACCCAACACCTCCTTTGAGCC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGGTTCTTTGTTCTCTTaGAATTCCTTCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEGSLFS*NSFRQL
Trigger: CAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAACC...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTGAATCCAAAGCCACGTaGCTAATCTTCACACTTCGC +
Preference number: 5 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLESKAT*LIFTLR
Trigger: GCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTC...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTCTTTCTTTCTGTTTTaGGCACCTTTGTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQSFFLF*APLWLC
Trigger: GCACAGCCACAAAGGTGCCAAAAACAGAAAGAAAGA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTTATGGCAAGCATACTaGCATAATTTGCAAACAGAG +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPLWQAY*HNLQTE
Trigger: CTCTGTTTGCAAATTATGCAAGTATGCTTGCCATAA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCCCCTGCCGAAGCTCCTaGATTTTATTAGTCGAACCA +
Preference number: 5 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLPCRSS*ILLVEP
Trigger: TGGTTCGACTAATAAAATCAAGGAGCTTCGGCAGGG...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTCTCGAAGCCATTGTTaGAATACACTTGCAATGACG +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICSRSHC*NTLAMT
Trigger: CGTCATTGCAAGTGTATTCAAACAATGGCTTCGAGA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp TTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCAGGGAGCTAAGGCAAATCTCGAAGCCATaGTTTGAATACACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: FRNLLEGSDLPAVFRELRQISKP*FEYTCN
Trigger: ATTGCAAGTGTATTCAAACAATGGCTTCGAGATTTG...CCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCAAGCTACTGATATCTTaGAGACGAGCCTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPKLLIS*RRALYL
Trigger: TAAATACAAGGCTCGTCTCAAAGATATCAGTAGCTT...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGTGACAACCTGGTCTTaGCCTTATTCTCAGCAAATT +
Preference number: 5 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKVTTWS*PYSQQI
Trigger: AATTTGCTGAGAATAAGGCAAAGACCAGGTTGTCAC...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCTACGCCCCTTTCCCATaGATCTACGAATCAGTGACA +
Preference number: 5 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFYAPFP*IYESVT
Trigger: TGTCACTGATTCGTAGATCAATGGGAAAGGGGCGTA...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTGCTGCTTTTTAAGTaGCTTTCGCAACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GLTIVDEVMKRSPKGEICLLLFK*LSQLAG
Trigger: TCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA...ACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAATTGTCTTCCAGGAATTaGGTCTGGCCCAATGGTCCT +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLSSRN*VWPNGP
Trigger: AGGACCATTGGGCCAGACCAAATTCCTGGAAGACAA...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTTCTTTAATTTTTGTTaGCCCTTTTCCGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPFFNFC*PFSGLK
Trigger: CTTCAACCCGGAAAAGGGCAAACAAAAATTAAAGAA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAAAGGCCAGCATGGTATaGCAGGACAGTGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLKASMV*QDSAGE
Trigger: CTCCCCAGCACTGTCCTGCAATACCATGCTGGCCTT...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCTCCACAATCATCATTTaGCTGTTACCCTTTCAATAC +
Preference number: 5 (lower is better)
Translates to: GRTTIRIDYCGRGDETQPSTIII*LLPFQY
Trigger: GTATTGAAAGGGTAACAGCAAAATGATGATTGTGGA...GGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAATTTCCCGAGACTGAATaGCGGGTAATGTTCATGAAT +
Preference number: 5 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKFPETE*RVMFMN
Trigger: ATTCATGAACATTACCCGCAATTCAGTCTCGGGAAA...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568042.5
CDS TCA 90 bp TCTCGTGAGAATTCCATGGGCTCTCTCCAGGAGTTTGCTGCTAGTTaGATTAGCAAATATTCCATCTTTATCAAGCAAGGAGGTGCCACT +
Preference number: 5 (lower is better)
Translates to: SRENSMGSLQEFAAS*ISKYSIFIKQGGAT
Trigger: AGTGGCACCTCCTTGCTTGATAAAGATGGAATATTTGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS GCA 90 bp TCGGAAAACAGCTACAGGATCAATTCCAATCATCCCAGAGATAAATaGATTCTTGCTGCTTCTCAGAAGAGCTACAATGTCTGGGCGCAT +
Preference number: 5 (lower is better)
Translates to: SENSYRINSNHPRDK*ILAASQKSYNVWAH
Trigger: ATGCGCCCAGACATTGTAGCTCTTCTGAGAAGCAGCAAGAATGCATTTATCTCTGGGATGATTGGAATTGATCCTGTAGCTGTTTTCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000563925.1
ENST00000564571.5
ENST00000566885.5
ENST00000567095.1
ENST00000567560.5
CDS GCA 90 bp CAAATATTCCATCTTTATCAAGCAAGGAGGTGCCACTTGATAGTCTaGTCTGGCGAATCCCAGTTCTGCCATTCCAGGCAATATCAAATG +
Preference number: 5 (lower is better)
Translates to: QIFHLYQARRCHLIV*SGESQFCHSRQYQM
Trigger: CATTTGATATTGCCTGGAATGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCACCTCCTTGCTTGATAAAGATGGAATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000563648.1
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS CCA 90 bp ATTCCATCTTTATCAAGCAAGGAGGTGCCACTTGATAGTCTGCTCTaGCGAATCCCAGTTCTGCCATTCCAGGCAATATCAAATGTATCA +
Preference number: 5 (lower is better)
Translates to: IPSLSSKEVPLDSLL*RIPVLPFQAISNVS
Trigger: TGATACATTTGATATTGCCTGGAATGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCACCTCCTTGCTTGATAAAGATGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000563648.1
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGGACAATCTGTTGGATaGAGAATCCATTCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAGQSVG*RIHSSP
Trigger: TGGAGAAGAATGGATTCTCAATCCAACAGATTGTCC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGCTCAAGTTTTCCCAGTaGGTGGTTATCATACATTTT +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVELKFSQ*VVIIHF
Trigger: AAAATGTATGATAACCACCAACTGGGAAAACTTGAG...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGATCTGTCTTCGTGTCTaGGGAAGAAATCCTACCATT +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEICLRV*GRNPTI
Trigger: AATGGTAGGATTTCTTCCCAAGACACGAAGACAGAT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAAACAGCCTCTGCCAACTaGTATGGCAAAATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSETASAN*YGKISF
Trigger: AAAGCTTATTTTGCCATACAAGTTGGCAGAGGCTGT...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAAAAAGCTCGGAGAATaGCCCATCGGAAAACAGCTA +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETKKLGE*PIGKQL
Trigger: TAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTTT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACAATCCAACTTCTGGCTTaGTTTCTCTTAGCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTIQLLA*FLLAFV
Trigger: AACAAAGGCTAAGAGAAACAAAGCCAGAAGTTGGAT...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTCTGTAGCCACATGGCTTTTATTCTGTaGTCAAAAGAACAATCCTCC +
Preference number: 5 (lower is better)
Translates to: EVMKRSPKGEICLPLCSHMAFIL*SKEQSS
Trigger: GGAGGATTGTTCTTTTGACAACAGAATAAAAGCCAT...GTGGCTACAGAGTGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATCTCCTGCTGCTTGTTaGGTGACTCCTTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTSPAAC*VTPSSS
Trigger: ACTGCTTGAAGGAGTCACCAAACAAGCAGCAGGAGA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGGCTCTCTCCTGCTGCTaGTTTGGTGACTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRALSCC*FGDSFK
Trigger: CTTGAAGGAGTCACCAAACAAGCAGCAGGAGAGAGC...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp TTGTTTGCCCTTTTCCGGGTTGAAGGTTCCTCTGCTGATGAACTGAGGCTTGTCTGTTTCTTTGGATACTaGTGTCTAGTTGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: LFALFRVEGSSADELRLVCFFGY*CLVGNL
Trigger: CAAATTCCCAACTAGACACAAGTATCCAAAGAAACA...GACAAGCCTCAGTTCATCAGCAGAGGAACCTTCAACCCGGAAAAGGGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGCTTGACAGTACTAGATaGGCATGGACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELDSTR*AWTSFS
Trigger: AGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAAG...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACTTGACAGTACTAGATaGGCATGGACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEALDSTR*AWTSFS
Trigger: AGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAAG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGCCCATTCTGTCTGTCTaGGATAATTCCTTGACAGTA +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQPILSV*DNSLTV
Trigger: TACTGTCAAGGAATTATCCAAGACAGACAGAATGGG...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACACTTGGTAATCTCTCCTaGAGACATAGTCTTATGAAG +
Preference number: 5 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTLGNLS*RHSLMK
Trigger: CTTCATAAGACTATGTCTCAAGGAGAGATTACCAAG...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GTGTGCTGTGAGAAGAGTGCTCTGCATTTTGGAGTATGGGCTCCAAATGTGGAGTTTGGAGAAGGTTCTTaGTTCTCTTTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: VCCEKSALHFGVWAPNVEFGEGS*FSLNSF
Trigger: GAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAA...CTCCACATTTGGAGCCCATACTCCAAAATGCAGAGCACTCTTCTCACAGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAACTAGTGTATCCTTCTaGCTGTCTTCATTATCTAGG +
Preference number: 5 (lower is better)
Translates to: GPQLGLTIVDEVMKRSPKTSVSF*LSSLSR
Trigger: CCTAGATAATGAAGACAGCAAGAAGGATACACTAGT...TTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATGTAGGGATGCTATATaGGGTGGCTTTAAAGATGTG +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPCRDAI*GGFKDV
Trigger: CACATCTTTAAAGCCACCCAATATAGCATCCCTACA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTCTCGAAGCCATTGTTaGAATACACTTGCAATGACG +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKESRSHC*NTLAMT
Trigger: CGTCATTGCAAGTGTATTCAAACAATGGCTTCGAGA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAATGAGTTCGGGAGAGTaGATCAATCACAGAGTATAC +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPMSSGE*INHRVY
Trigger: GTATACTCTGTGATTGATCAACTCTCCCGAACTCAT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAATGAGTTCGGGAGAGTaGATCAATCACAGAGTATAC +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAMSSGE*INHRVY
Trigger: GTATACTCTGTGATTGATCAACTCTCCCGAACTCAT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTTGCTGCTTTTTAAGTaGCTTTCGCAACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLLLFK*LSQLAG
Trigger: TCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCATTGAAAATTCAGGTTTaGTTTGGGGCTGGGAATGTG +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEALKIQV*FGAGNV
Trigger: CACATTCCCAGCCCCAAACAAAACCTGAATTTTCAA...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS TCA 90 bp ATGGTGCCACCAAACACTCTCCAATTCTTGGCTTTTCAATTGTCTTaGAGGCTTTGCGCTCCTTCTCTAAAATATCTGTTTGCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: MVPPNTLQFLAFQLS*RLCAPSLKYLFAGE
Trigger: TTCGCCAGCAAACAGATATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCCAAGAATTGGAGAGTGTTTGGTGGCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS TCA 90 bp CAAGTGAACACACATAGACACACAATTTCTTCATGCAGCCTATGCTaGAACTGGTGCCCTCCTATTCAAGATCCATATGTAGCTGGCATA +
Preference number: 5 (lower is better)
Translates to: QVNTHRHTISSCSLC*NWCPPIQDPYVAGI
Trigger: TATGCCAGCTACATATGGATCTTGAATAGGAGGGCACCAGTTTCAGCATAGGCTGCATGAAGAAATTGTGTGTCTATGTGTGTTCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS GCA 90 bp AGAAGAGACTTGGTAATGCGATCTTGTAGTGTCAGTCTTGTCAGGTaGTTTAAAGAATTTACTTCTAGCAAGTGCTTTGGAAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RRDLVMRSCSVSLVR*FKEFTSSKCFGRAG
Trigger: GCCTGCCCTTCCAAAGCACTTGCTAGAAGTAAATTCTTTAAAGCACCTGACAAGACTGACACTACAAGATCGCATTACCAAGTCTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 90 bp AATCTCTGGATAATAACAGATGCTTGTCTCAGATGGAGGAAATGCTaGCTACACAGCAAGACCCTGAACCATCGCTGCAACAATATGATT +
Preference number: 5 (lower is better)
Translates to: NLWIITDACLRWRKC*LHSKTLNHRCNNMI
Trigger: AATCATATTGTTGCAGCGATGGTTCAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATCTGTTATTATCCAGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 90 bp ATTGCCTTCTTTTTCTTAGCAACTGGGTTTTTAGGCACCATTCCCTaGCTGGAGTACACCTTCATAATTATAACAATCTCCGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: IAFFFLATGFLGTIP*LEYTFIIITISAHG
Trigger: GCCATGAGCGGAGATTGTTATAATTATGAAGGTGTACTCCAGGCAGGGAATGGTGCCTAAAAACCCAGTTGCTAAGAAAAAGAAGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568781.1
CDS-3UTR CAA 90 bp TCATTATTTCCAAAGAGTGCTAGCTGTTGGTTGGAGGTGCAGTCTGGGTCCACACTCAAGTTTTCCCAGTaGGTGGTTATCATACATTTT +
Preference number: 5 (lower is better)
Translates to: SLFPKSASCWLEVQSGSTLKFSQ*VVIIHF
Trigger: AAAATGTATGATAACCACCAACTGGGAAAACTTGAG...TGTGGACCCAGACTGCACCTCCAACCAACAGCTAGCACTCTTTGGAAATAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp TTCACTTGCTCCTGCCAGGAGGTAATAGAATACATGATAGTTCCGTTCATTATGATCTCTCATCTTCACTaGCTCCTGCCAGGAGGTAAT +
Preference number: 5 (lower is better)
Translates to: FTCSCQEVIEYMIVPFIMISHLH*LLPGGN
Trigger: ATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGAT...CATAATGAACGGAACTATCATGTATTCTATTACCTCCTGGCAGGAGCAAGTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGAGATAAATGCATTCTaGCTGCTTCTCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETEINAF*LLLRRA
Trigger: AGCTCTTCTGAGAAGCAGCAAGAATGCATTTATCTC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAAAAAGCTCGGAGAATaGCCCATCGGAAAACAGCTA +
Preference number: 5 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPKKLGE*PIGKQL
Trigger: TAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTTT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCA +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTALSRS*LLVELA
Trigger: TGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCAGGGCAGGCTTGGATTaGAAATTTTTGTTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLRAGLD*KFLFLV
Trigger: CACGAGAAACAAAAATTTCAAATCCAAGCCTGCCCT...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTTGTAGTGTCAGTCTaGTCAGGTGCTTTAAAGAAT +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLVVSV*SGALKN
Trigger: ATTCTTTAAAGCACCTGACAAGACTGACACTACAAG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAGATAATAACAGATGCTaGTCTCAGATGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPDNNRC*SQMEEM
Trigger: CATTTCCTCCATCTGAGACAAGCATCTGTTATTATC...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGATGACAGACTCTAGTTaGCTCTTTTGGCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETMTDSS*LFWLSS
Trigger: TGAGGAAAGCCAAAAGAGCAAACTAGAGTCTGTCAT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAGAGGCACTGAGGGCATaGTCCCGTGAATCAAATTTT +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAEALRA*SRESNF
Trigger: AAAATTTGATTCACGGGACAATGCCCTCAGTGCCTC...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CAA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAGAGGCACTGAGGGCATaGTCCCGTGAATCAAATTTT +
Preference number: 5 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEEALRA*SRESNF
Trigger: AAAATTTGATTCACGGGACAATGCCCTCAGTGCCTC...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCACTTCTAGTTTCCCTGTaGATATCCAAAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPLLVSL*ISKVRA
Trigger: AGCTCTTACTTTGGATATCAACAGGGAAACTAGAAG...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTTGCTGCAACTGTTTTaGCCTTTCTTCCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETLLQLF*PFFLLS
Trigger: ACTGAGAAGGAAGAAAGGCAAAAACAGTTGCAGCAA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAATTGTCTTGAAGGCTTaGCGCTCCTTCTCTAAAATA +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAIVLKA*RSFSKI
Trigger: TATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAAT...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGATTGTCTTGAAGGCTTaGCGCTCCTTCTCTAAAATA +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRIVLKA*RSFSKI
Trigger: TATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAAT...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp TTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTCCTTGACAGTACTAGATaGGCATGGACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: FLSCFRNLLEGSDLPAVFLDSTR*AWTSFS
Trigger: AGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAAG...GAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTCTTGGATAATTCCTaGACAGTACTAGATTGGCAT +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAVLDNS*TVLDWH
Trigger: ATGCCAATCTAGTACTGTCAAGGAATTATCCAAGAC...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGAGGGGAATACTCATATaGTCCTTTGGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQRGILI*SFGVKK
Trigger: TTTCTTCACTCCAAAGGACAATATGAGTATTCCCCT...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGAGGGGAATACTCATATaGTCCTTTGGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKERGILI*SFGVKK
Trigger: TTTCTTCACTCCAAAGGACAATATGAGTATTCCCCT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACTGTTTAAGGCTTCTTaGCTGACAAGGGGAATACTC +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLFKAS*LTRGIL
Trigger: GAGTATTCCCCTTGTCAGCAAAGAAGCCTTAAACAG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAGAATCCAAAGCCACGTaGCTAATCTTCACACTTCGC +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAESKAT*LIFTLR
Trigger: GCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTC...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGACTAGTGTATCCTTCTaGCTGTCTTCATTATCTAGG +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKETSVSF*LSSLSR
Trigger: CCTAGATAATGAAGACAGCAAGAAGGATACACTAGT...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAACTAGTGTATCCTTCTaGCTGTCTTCATTATCTAGG +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPTSVSF*LSSLSR
Trigger: CCTAGATAATGAAGACAGCAAGAAGGATACACTAGT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGGTGACAACCTGGTCTTaGCCTTATTCTCAGCAAATT +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETVTTWS*PYSQQI
Trigger: AATTTGCTGAGAATAAGGCAAAGACCAGGTTGTCAC...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAAGAGTGCTCTGCATTTaGGAGTATGGGCTCCAAATG +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTARVLCI*EYGLQM
Trigger: CATTTGGAGCCCATACTCCAAAATGCAGAGCACTCT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS TCA 90 bp CTGTTGTCAAAAGAACAATCCTCCCATCCTGAAGGGTCTGAACCCTaGATTTCCAGAGATCCATATCCCTTAATATTCACCAATCCAACT +
Preference number: 5 (lower is better)
Translates to: LLSKEQSSHPEGSEP*ISRDPYPLIFTNPT
Trigger: AGTTGGATTGGTGAATATTAAGGGATATGGATCTCTGGAAATTCAGGGTTCAGACCCTTCAGGATGGGAGGATTGTTCTTTTGACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 90 bp AAATCACTGACACTTGCTATGATCTGGACAGAGTCATTTTGCCAATaGATAGAATCCAAAGCCACGTTGCTAATCTTCACACTTCGCTTG +
Preference number: 5 (lower is better)
Translates to: KSLTLAMIWTESFCQ*IESKATLLIFTLRL
Trigger: CAAGCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTCTATGCATTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGTCAGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 90 bp AGAAAATCTGTCTTCGTGTCTTGGGAAGAAATCCTACCATTTCCATaGCAAGTTGTAGGCGCTCAAAGTCATGTCTCAAATCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: RKSVFVSWEEILPFP*QVVGAQSHVSNLLL
Trigger: AAGGAGAAGATTTGAGACATGACTTTGAGCGCCTACAACTTGCCATGGAAATGGTAGGATTTCTTCCCAAGACACGAAGACAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000567560.5
CDS CCA 90 bp TCCCTGCCTGGAGTACACCTTCATAATTATAACAATCTCCGCTCATaGCTTCTTTCTCTAAAAACACTTGGGAGTAAATGGGTAGATGAG +
Preference number: 5 (lower is better)
Translates to: SLPGVHLHNYNNLRS*LLSLKTLGSKWVDE
Trigger: CTCATCTACCCATTTACTCCCAAGTGTTTTTAGAGAAAGAAGCCATGAGCGGAGATTGTTATAATTATGAAGGTGTACTCCAGGCAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568781.1
CDS-3UTR CAA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAATCTCTCATCTTCACTaGCTCCTGCCAGGAGGTAAT +
Preference number: 5 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPISHLH*LLPGGN
Trigger: ATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGAT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAATCTGTCTTCGTGTCTaGGGAAGAAATCCTACCATT +
Preference number: 5 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPICLRV*GRNPTI
Trigger: AATGGTAGGATTTCTTCCCAAGACACGAAGACAGAT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAAGGGCAGGCTTGGATTaGAAATTTTTGTTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKRAGLD*KFLFLV
Trigger: CACGAGAAACAAAAATTTCAAATCCAAGCCTGCCCT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000564571.5
CDS-3UTR CAA 90 bp GGGCCTCATTACCTGAGGCAGCTCGGTAGAATGGAGATTTGGAATAAATCTGAATTTGGAAGGGCAGGCTaGGATTTGAAATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: GPHYLRQLGRMEIWNKSEFGRAG*DLKFLF
Trigger: AAACAAAAATTTCAAATCCAAGCCTGCCCTTCCAAA...TTCAGATTTATTCCAAATCTCCATTCTACCGAGCTGCCTCAGGTAATGAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGAAGTTCCAAGCTTCCTaGAGAGCTCTCACTATCAGG +
Preference number: 5 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRKFQAS*RALTIR
Trigger: CCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACTT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAAGAGGAACTGTCTTTTaGGGCAAGAGCTGCATCTTT +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTARGTVF*GKSCIF
Trigger: AAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTCT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGCTTGGTAATCTCTCCTaGAGACATAGTCTTATGAAG +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETLGNLS*RHSLMK
Trigger: CTTCATAAGACTATGTCTCAAGGAGAGATTACCAAG...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGTTTGGAGAAGGTTCTTaGTTCTCTTTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRPRNSAHTVLAICLEKRFGEGS*FSLNSF
Trigger: GAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAA...CCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTTTGGAGAAGGTTCTTaGTTCTCTTTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKEFGEGS*FSLNSF
Trigger: GAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGAACACTTTAAAAGTGTaGACCCAAACTCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETNTLKV*TQTLTG
Trigger: TCCAGTGAGAGTTTGGGTCAACACTTTTAAAGTGTT...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCAGTTATGGCAAGCATACTaGCATAATTTGCAAACAGAG +
Preference number: 5 (lower is better)
Translates to: RPRNSAHTVLAICLEKRQLWQAY*HNLQTE
Trigger: CTCTGTTTGCAAATTATGCAAGTATGCTTGCCATAA...CTGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGGCACAAATCTCGAAGCCATaGTTTGAATACACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: EAQEFSTYSLSHMLRKEAQISKP*FEYTCN
Trigger: ATTGCAAGTGTATTCAAACAATGGCTTCGAGATTTG...TGCCTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAAATGAGTTCGGGAGAGTaGATCAATCACAGAGTATAC +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKMSSGE*INHRVY
Trigger: GTATACTCTGTGATTGATCAACTCTCCCGAACTCAT...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCATCTTTGAGACGAGCCTaGTATTTATTCATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPSLRRA*YLFICS
Trigger: GGAACAAATGAATAAATACAAGGCTCGTCTCAAAGA...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp ACTATTGTGGACGAGGTGATGAAACGCAGCCCCAAAGGTGAGATTTGTTTACCAAAGCTACTGATATCTTaGAGACGAGCCTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: TIVDEVMKRSPKGEICLPKLLIS*RRALYL
Trigger: TAAATACAAGGCTCGTCTCAAAGATATCAGTAGCTT...TGGTAAACAAATCTCACCTTTGGGGCTGCGTTTCATCACCTCGTCCACAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp TTGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCAAGCTACTGATATCTTaGAGACGAGCCTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: LLLFKLLSQLAGRFRLASKLLIS*RRALYL
Trigger: TAAATACAAGGCTCGTCTCAAAGATATCAGTAGCTT...GCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGAGAAAATGGCCAAGTaGAGCAGCCACTTTACACAA +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTEKMAK*SSHFTQ
Trigger: TTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAGGAGGCCCAGGAATTCAGCACATACAGTCTTAGCCATATGCTTAGAAAAGAGTTAGTACAGGTTTCATaGATCTACGAATCAGTGACA +
Preference number: 5 (lower is better)
Translates to: QEAQEFSTYSLSHMLRKELVQVS*IYESVT
Trigger: TGTCACTGATTCGTAGATCAATGAAACCTGTACTAA...CTCTTTTCTAAGCATATGGCTAAGACTGTATGTGCTGAATTCCTGGGCCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568042.5
CDS-3UTR CAA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGGGACAATCTGTTGGATaGAGAATCCATTCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SKTRATANNSLVSSRPKVGQSVG*RIHSSP
Trigger: TGGAGAAGAATGGATTCTCAATCCAACAGATTGTCC...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp GATGGAATGCTGATCTCTCATCTTCACTTGCTCCTGCCAGGAGGTAATAGAATACTCAAGTTTTCCCAGTaGGTGGTTATCATACATTTT +
Preference number: 5 (lower is better)
Translates to: DGMLISHLHLLLPGGNRILKFSQ*VVIIHF
Trigger: AAAATGTATGATAACCACCAACTGGGAAAACTTGAG...TATTCTATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGATCAGCATTCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CAA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGAAGAAAGTTTGTGCTTaGAGTCTTCCCAGAACCACT +
Preference number: 5 (lower is better)
Translates to: SKTRATANNSLVSSRPKVKKVCA*SLPRTT
Trigger: AGTGGTTCTGGGAAGACTCAAAGCACAAACTTTCTT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTATCTCTCATCTTCACTaGCTCCTGCCAGGAGGTAAT +
Preference number: 5 (lower is better)
Translates to: RVVFTLWYSTELYIFALCISHLH*LLPGGN
Trigger: ATTACCTCCTGGCAGGAGCAAGTGAAGATGAGAGAT...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGACAGCCTCTGCCAACTaGTATGGCAAAATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: SKTRATANNSLVSSRPKVTASAN*YGKISF
Trigger: AAAGCTTATTTTGCCATACAAGTTGGCAGAGGCTGT...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGTAGCCTGTGGAAAGTaGCTTTCTTCATCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTVACGK*LSSSKR
Trigger: TCTTTTGGATGAAGAAAGCAACTTTCCACAGGCTAC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp TCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAGTAGGCCAAAAGTGGAGATAAATGCATTCTaGCTGCTTCTCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SKTRATANNSLVSSRPKVEINAF*LLLRRA
Trigger: AGCTCTTCTGAGAAGCAGCAAGAATGCATTTATCTC...CACTTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAAGGGCAGGCTTGGATTaGAAATTTTTGTTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTRAGLD*KFLFLV
Trigger: CACGAGAAACAAAAATTTCAAATCCAAGCCTGCCCT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp ACATTCTGGAGCAAGTGCAGAGTAACAATTAATGCCCAGCAGTACACTACTCTCTTTGGAAGGGCAGGCTaGGATTTGAAATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TFWSKCRVTINAQQYTTLFGRAG*DLKFLF
Trigger: AAACAAAAATTTCAAATCCAAGCCTGCCCTTCCAAA...GAGAGTAGTGTACTGCTGGGCATTAATTGTTACTCTGCACTTGCTCCAGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTTCTAGCAAGTGCTTaGGAAGGGCAGGCTTGGATT +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILLASA*EGQAWI
Trigger: AATCCAAGCCTGCCCTTCCAAAGCACTTGCTAGAAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTTGCCAGCTGTCTTATGGCTTTTATTCTGTaGTCAAAAGAACAATCCTCC +
Preference number: 5 (lower is better)
Translates to: LFKLLSQLAGRFRLASCLMAFIL*SKEQSS
Trigger: GGAGGATTGTTCTTTTGACAACAGAATAAAAGCCAT...AAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTGTTTCTTTGGATACTaGTGTCTAGTTGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETCFFGY*CLVGNL
Trigger: CAAATTCCCAACTAGACACAAGTATCCAAAGAAACA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AGAAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACTTCTAGTTTCCCTGTaGATATCCAAAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RKEAGPQLGLTIVDEVMKLLVSL*ISKVRA
Trigger: AGCTCTTACTTTGGATATCAACAGGGAAACTAGAAG...TTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATTGCTGCAACTGTTTTaGCCTTTCTTCCTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTLLQLF*PFFLLS
Trigger: ACTGAGAAGGAAGAAAGGCAAAAACAGTTGCAGCAA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGAGAGGAACTGTCTTTTaGGGCAAGAGCTGCATCTTT +
Preference number: 5 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRRGTVF*GKSCIF
Trigger: AAAGATGCAGCTCTTGCCCAAAAAGACAGTTCCTCT...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCACCCATTCTGTCTGTCTaGGATAATTCCTTGACAGTA +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAPILSV*DNSLTV
Trigger: TACTGTCAAGGAATTATCCAAGACAGACAGAATGGG...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATGTAGGGATGCTATATaGGGTGGCTTTAAAGATGTG +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTACRDAI*GGFKDV
Trigger: CACATCTTTAAAGCCACCCAATATAGCATCCCTACA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356056.10
ENST00000561618.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTCTTTGAGACGAGCCTaGTATTTATTCATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETSLRRA*YLFICS
Trigger: GGAACAAATGAATAAATACAAGGCTCGTCTCAAAGA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATTGCTGCTTTTTAAGTaGCTTTCGCAACTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTALLLFK*LSQLAG
Trigger: TCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCAA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AAAAGAGGCAGGACCACAATTAGGATTGACTATTGTGGACGAGGTGATGAAACGTTCTTTAATTTTTGTTaGCCCTTTTCCGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: KRGRTTIRIDYCGRGDETFFNFC*PFSGLK
Trigger: CTTCAACCCGGAAAAGGGCAAACAAAAATTAAAGAA...CGTTTCATCACCTCGTCCACAATAGTCAATCCTAATTGTGGTCCTGCCTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGCCCATGCAATGTATTaGGCAGGAACTAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLAHAMY*AGTKQE
Trigger: CTCCTGTTTAGTTCCTGCCAAATACATTGCATGGGC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAAGAGATGACACTAGATaGACTACAGAAGCAGGATTT +
Preference number: 5 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPRDDTR*TTEAGF
Trigger: AAATCCTGCTTCTGTAGTCAATCTAGTGTCATCTCT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCAACAGCAAACAATAGTTaGGTTTCCAGTAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPTANNS*VSSRPK
Trigger: TTTTGGCCTACTGGAAACCAAACTATTGTTTGCTGT...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS GCA 90 bp CGTGAATCAAATTTTGGACTGCTGGATATCTTAGGTGATGGAAACTaGAAGTCTCCTTCATCTGAAATGACAGACTCTAGTTTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: RESNFGLLDILGDGN*KSPSSEMTDSSLLF
Trigger: AAAGAGCAAACTAGAGTCTGTCATTTCAGATGAAGGAGACTTGCAGTTTCCATCACCTAAGATATCCAGCAGTCCAAAATTTGATTCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 90 bp CTTTTTGAAATGCGATTATTTGAGAGTTTACAGGCTACATTCAGCTaGGTGCCCATTCTGTCTGTCTTGGATAATTCCTTGACAGTACTA +
Preference number: 5 (lower is better)
Translates to: LFEMRLFESLQATFS*VPILSVLDNSLTVL
Trigger: TAGTACTGTCAAGGAATTATCCAAGACAGACAGAATGGGCACCCAGCTGAATGTAGCCTGTAAACTCTCAAATAATCGCATTTCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000568781.1
CDS CCA 90 bp TTAGTTGCTGTGTTCACTGAGGTTTCCCATGCACAAACCATTACATaGGAAGAAGCTGTGAAGGTTAGCTTTAGATTAGCAAAGACTATT +
Preference number: 5 (lower is better)
Translates to: LVAVFTEVSHAQTIT*EEAVKVSFRLAKTI
Trigger: AATAGTCTTTGCTAATCTAAAGCTAACCTTCACAGCTTCTTCCCATGTAATGGTTTGTGCATGGGAAACCTCAGTGAACACAGCAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS-3UTR CAA 90 bp CAGCAATGGCCCTATCTAAGACTAGAGCTACAGCAAACAATAGTTTGGTTTCCACTCAAGTTTTCCCAGTaGGTGGTTATCATACATTTT +
Preference number: 5 (lower is better)
Translates to: QQWPYLRLELQQTIVWFPLKFSQ*VVIIHF
Trigger: AAAATGTATGATAACCACCAACTGGGAAAACTTGAG...TGGAAACCAAACTATTGTTTGCTGTAGCTCTAGTCTTAGATAGGGCCATTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAACAGCCTCTGCCAACTaGTATGGCAAAATAAGCTTT +
Preference number: 5 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPTASAN*YGKISF
Trigger: AAAGCTTATTTTGCCATACAAGTTGGCAGAGGCTGT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGGAGATAAATGCATTCTaGCTGCTTCTCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: FLGYNYIQLQVMVESTIREINAF*LLLRRA
Trigger: AGCTCTTCTGAGAAGCAGCAAGAATGCATTTATCTC...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCATCCTGGAAAGAATATTaGGAGCTGTATCCTGATTGG +
Preference number: 5 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPSWKEY*ELYPDW
Trigger: CCAATCAGGATACAGCTCCAAATATTCTTTCCAGGA...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAGATAATAACAGATGCTaGTCTCAGATGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTDNNRC*SQMEEM
Trigger: CATTTCCTCCATCTGAGACAAGCATCTGTTATTATC...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATCCAACTTCTGGCTTaGTTTCTCTTAGCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTIQLLA*FLLAFV
Trigger: AACAAAGGCTAAGAGAAACAAAGCCAGAAGTTGGAT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAATGACAGACTCTAGTTaGCTCTTTTGGCTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPMTDSS*LFWLSS
Trigger: TGAGGAAAGCCAAAAGAGCAAACTAGAGTCTGTCAT...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACACTCTTTTTCATTCTGTaGCTGCAACTGTTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTLFFIL*LQLFLP
Trigger: AGGCAAAAACAGTTGCAGCAACAGAATGAAAAAGAG...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCGGCTTTTCAATTGTCTaGAAGGCTTTGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIGFSIV*KALRSF
Trigger: GAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCC...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCTTGACAGTACTAGATaGGCATGGACTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRLDSTR*AWTSFS
Trigger: AGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAAG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAAAGGGGAATACTCATATaGTCCTTTGGAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAERGILI*SFGVKK
Trigger: TTTCTTCACTCCAAAGGACAATATGAGTATTCCCCT...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGAGTTGCTTTCGCAACTaGCTGGAAGGTTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGSCFRN*LEGSDL
Trigger: CAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACT...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGTTATGGCTTCATCTCTaGATCAGGCCAACAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGLWLHL*IRPTRP
Trigger: AGGCCTTGTTGGCCTGATCAAGAGATGAAGCCATAA...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS TCA 90 bp CAGGTCCTAAAACTTTATGAATATCCTCTCCTGACTTCTCCCTTGTaGGATATTACTAAGACACAGTCAAAGTGGGTTTTCTCTTACTGT +
Preference number: 5 (lower is better)
Translates to: QVLKLYEYPLLTSPL*DITKTQSKWVFSYC
Trigger: ACAGTAAGAGAAAACCCACTTTGACTGTGTCTTAGTAATATCTCACAAGGGAGAAGTCAGGAGAGGATATTCATAAAGTTTTAGGACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS GCA 90 bp CTTTTTAAATCACTGACACTTGCTATGATCTGGACAGAGTCATTTTaGCAATGCATAGAATCCAAAGCCACGTTGCTAATCTTCACACTT +
Preference number: 5 (lower is better)
Translates to: LFKSLTLAMIWTESF*QCIESKATLLIFTL
Trigger: AAGTGTGAAGATTAGCAACGTGGCTTTGGATTCTATGCATTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGTCAGTGATTTAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS GCA 90 bp ATACAATCCACTGTCTGTTTTTGCAGTTTTATTACAAGACGGTCATaGCCATTTGTTTACTTAGTGTCTATGGCTGCTTTCACACTACAG +
Preference number: 5 (lower is better)
Translates to: IQSTVCFCSFITRRS*PFVYLVSMAAFTLQ
Trigger: CTGTAGTGTGAAAGCAGCCATAGACACTAAGTAAACAAATGGGCATGACCGTCTTGTAATAAAACTGCAAAAACAGACAGTGGATTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS CCA 90 bp AGAATACATGATAGTTCCGTTCATTATGCTCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATTTTTCAACATAGGCACCAAGTACAG +
Preference number: 5 (lower is better)
Translates to: RIHDSSVHYAPDKRV*TSPVDIFQHRHQVQ
Trigger: CTGTACTTGGTGCCTATGTTGAAAAATATCTACTGGAGAAGTCCAGACTCGTTTATCAGGAGCATAATGAACGGAACTATCATGTATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000567560.5
CDS CCA 90 bp AGAAATTCATCCATGCTTTTTAAATCACTGACACTTGCTATGATCTaGACAGAGTCATTTTGCCAATGCATAGAATCCAAAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: RNSSMLFKSLTLAMI*TESFCQCIESKATL
Trigger: CAACGTGGCTTTGGATTCTATGCATTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGTCAGTGATTTAAAAAGCATGGATGAATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS-3UTR CAA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGGACAATCTGTTGGATaGAGAATCCATTCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLGQSVG*RIHSSP
Trigger: TGGAGAAGAATGGATTCTCAATCCAACAGATTGTCC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTGTAGCCTGTGGAAAGTaGCTTTCTTCATCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: RVVFTLWYSTELYIFALCVACGK*LSSSKR
Trigger: TCTTTTGGATGAAGAAAGCAACTTTCCACAGGCTAC...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCAAAAAGCTCGGAGAATaGCCCATCGGAAAACAGCTA +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIKKLGE*PIGKQL
Trigger: TAGCTGTTTTCCGATGGGCAATTCTCCGAGCTTTTT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAGATGAACAGGCTCATATGCGGTTTTCGGTTTAATCTATACAAAGAGAAAAGCCCATACTTTTCAAAATaGCACATGGCGCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: QMNRLICGFRFNLYKEKSPYFSK*HMALYH
Trigger: ATGATACAGCGCCATGTGCAATTTTGAAAAGTATGG...GCTTTTCTCTTTGTATAGATTAAACCGAAAACCGCATATGAGCCTGTTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp TTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATTAGGCCATACTTTTCAAAATaGCACATGGCGCTGTATCAT +
Preference number: 5 (lower is better)
Translates to: FLGYNYIQLQVMVESTIRPYFSK*HMALYH
Trigger: ATGATACAGCGCCATGTGCAATTTTGAAAAGTATGG...CCTAATTGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AAAGAGAAAATGGCCAAGTTGAGCAGCCACTTTACACAAATAGTTGGAGCAGAATTTGGAAGGGCAGGCTaGGATTTGAAATTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: KEKMAKLSSHFTQIVGAEFGRAG*DLKFLF
Trigger: AAACAAAAATTTCAAATCCAAGCCTGCCCTTCCAAA...TTCTGCTCCAACTATTTGTGTAAAGTGGCTGCTCAACTTGGCCATTTTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACAATGGCTTTTATTCTGTaGTCAAAAGAACAATCCTCC +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTMAFIL*SKEQSS
Trigger: GGAGGATTGTTCTTTTGACAACAGAATAAAAGCCAT...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp CAAGGATTCCTAGGATATAACTACATCCAACTTCAGGTGATGGTAGAGTCAACATGTTTCTTTGGATACTaGTGTCTAGTTGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: QGFLGYNYIQLQVMVESTCFFGY*CLVGNL
Trigger: CAAATTCCCAACTAGACACAAGTATCCAAAGAAACA...TGTTGACTCTACCATCACCTGAAGTTGGATGTAGTTATATCCTAGGAATCCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AAGCCTGAAACAAACAACCTTCAACTACTAAACTTCACAGCTGTAAAGCAACCAGTCTTGGATAATTCCTaGACAGTACTAGATTGGCAT +
Preference number: 5 (lower is better)
Translates to: KPETNNLQLLNFTAVKQPVLDNS*TVLDWH
Trigger: ATGCCAATCTAGTACTGTCAAGGAATTATCCAAGAC...TGGTTGCTTTACAGCTGTGAAGTTTAGTAGTTGAAGGTTGTTTGTTTCAGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGGGTTCTTTGTTCTCTTaGAATTCCTTCCGGCAACTG +
Preference number: 5 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGGSLFS*NSFRQL
Trigger: CAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAACC...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCACAAATCTCGAAGCCATaGTTTGAATACACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAQISKP*FEYTCN
Trigger: ATTGCAAGTGTATTCAAACAATGGCTTCGAGATTTG...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATCTTTGAGACGAGCCTaGTATTTATTCATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTASLRRA*YLFICS
Trigger: GGAACAAATGAATAAATACAAGGCTCGTCTCAAAGA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCAAAGCTACTGATATCTTaGAGACGAGCCTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAKLLIS*RRALYL
Trigger: TAAATACAAGGCTCGTCTCAAAGATATCAGTAGCTT...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AGATTTATACGTTTTCTTCAAATGTCAGAAATGAGAGGGTCCCTCAGGACAGCATTCTTTAATTTTTGTTaGCCCTTTTCCGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RFIRFLQMSEMRGSLRTAFFNFC*PFSGLK
Trigger: CTTCAACCCGGAAAAGGGCAAACAAAAATTAAAGAA...TGCTGTCCTGAGGGACCCTCTCATTTCTGACATTTGAAGAAAACGTATAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000561618.5
ENST00000568042.5
CDS-3UTR CAA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGTTCATCAAGCTGCTTTaGTGTAGCCATACAGTGCAT +
Preference number: 5 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLFIKLL*CSHTVH
Trigger: ATGCACTGTATGGCTACACAAAAGCAGCTTGATGAA...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS CCA 90 bp AGAATACATGATAGTTCCGTTCATTATGCTCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATTTTTCAACATAGGCACTCAAGTACT +
Preference number: 5 (lower is better)
Translates to: RIHDSSVHYAPDKRV*TSPVDIFQHRHSST
Trigger: AGTACTTGAGTGCCTATGTTGAAAAATATCTACTGGAGAAGTCCAGACTCGTTTATCAGGAGCATAATGAACGGAACTATCATGTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568438.1
CDS-3UTR CAA 90 bp ATACCCAATCAAATGTGGGAGTCATTCCAGAGAAAAGTGGTTAAAAGTAGTCTAGGCTACCATAATGGATaGATCCATCAAGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: IPNQMWESFQRKVVKSSLGYHNG*IHQGFS
Trigger: AGAAAAACCTTGATGGATCAATCCATTATGGTAGCC...TAGACTACTTTTAACCACTTTTCTCTGGAATGACTCCCACATTTGATTGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTGGCTACCATAATGGATaGATCCATCAAGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RVVFTLWYSTELYIFALCGYHNG*IHQGFS
Trigger: AGAAAAACCTTGATGGATCAATCCATTATGGTAGCC...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCATCTGTCTTCGTGTCTaGGGAAGAAATCCTACCATT +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIICLRV*GRNPTI
Trigger: AATGGTAGGATTTCTTCCCAAGACACGAAGACAGAT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGTCCTGGAAAGAATATTaGGAGCTGTATCCTGATTGG +
Preference number: 5 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGSWKEY*ELYPDW
Trigger: CCAATCAGGATACAGCTCCAAATATTCTTTCCAGGA...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp AAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGCTGGATAATAACAGATGCTaGTCTCAGATGGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: KYKYLVQKVQLLYDLRGLDNNRC*SQMEEM
Trigger: CATTTCCTCCATCTGAGACAAGCATCTGTTATTATC...CAGCCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCTCTCTACTCTTTGCTTaGACTGATAGGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYISLLFA*TDRKMV
Trigger: CACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAGA...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCCCATTCTGTCTGTCTaGGATAATTCCTTGACAGTA +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIPILSV*DNSLTV
Trigger: TACTGTCAAGGAATTATCCAAGACAGACAGAATGGG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGTAAATACAAATACTTGGTTCAAAAGGTGCAACTTTTATATGACCTCAGAGGGTCTCGAAGCCATTGTTaGAATACACTTGCAATGACG +
Preference number: 5 (lower is better)
Translates to: SKYKYLVQKVQLLYDLRGSRSHC*NTLAMT
Trigger: CGTCATTGCAAGTGTATTCAAACAATGGCTTCGAGA...CCCTCTGAGGTCATATAAAAGTTGCACCTTTTGAACCAAGTATTTGTATTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356056.10
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTTGTAGTGTCAGTCTaGTCAGGTGCTTTAAAGAAT +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILVVSV*SGALKN
Trigger: ATTCTTTAAAGCACCTGACAAGACTGACACTACAAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCCTTCTAGTTTCCCTGTaGATATCCAAAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYILLVSL*ISKVRA
Trigger: AGCTCTTACTTTGGATATCAACAGGGAAACTAGAAG...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp GTATTTACTCTGCTATTCATGATCAGTCAAGGATTCCTAGGATATAACTACATCATTGTCTTGAAGGCTTaGCGCTCCTTCTCTAAAATA +
Preference number: 5 (lower is better)
Translates to: VFTLLFMISQGFLGYNYIIVLKA*RSFSKI
Trigger: TATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAAT...GATGTAGTTATATCCTAGGAATCCTTGACTGATCATGAATAGCAGAGTAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS-3UTR CAA 90 bp AGGGTTGTGTTTACTTTGTGGTACTCCACTGAACTATACATTTTTGCTTTGTGTGAATTCTACTCCTTTTaGTGGAGAAGTAGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: RVVFTLWYSTELYIFALCEFYSF*WRSRKV
Trigger: TACCTTTCTACTTCTCCACAAAAAGGAGTAGAATTC...ACACAAAGCAAAAATGTATAGTTCAGTGGAGTACCACAAAGTAAACACAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS CAA 90 bp CTGAGCAGGCACATCCCCCGCCGCACCCCGCCCAGAGAGCACGCGTaGGACCGCCGCCTCAACCGCTGCCAGCGGCCGCCTCTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: LSRHIPRRTPPREHA*DRRLNRCQRPPLPV
Trigger: CACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGTGCGGCGGGGGATGTGCCTGCTCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000566885.5
ENST00000567560.5
CDS CAA 90 bp CCCCCGCCCTGTCAGAGAGACTCCGCCCCGCCCAGAGAGCACGCGTaGGACCGCCGCCTCAACCGCTGCCAGCGGCCGCCTCTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: PPPCQRDSAPPREHA*DRRLNRCQRPPLPV
Trigger: CACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGCGGAGTCTCTCTGACAGGGCGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS GCA 72 bp ACCGCTGCCAGCGGCCGCCTCTGCCGGTGCAACTACTaGCTCCGCCGCCGCCTCTCGCAGTCCGGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: TAASGRLCRCNY*LRRRLSQSGLS
Trigger: GGACAGCCCGGACTGCGAGAGGCGGCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000567560.5
CDS GCA 72 bp GCCGCCTCAACCGCTGCCAGCGGCCGCCTCTGCCGGTaGAACTACTGCCTCCGCCGCCGCCTCTCGCAGTCC +
Preference number: 6 (lower is better)
Translates to: AASTAASGRLCR*NYCLRRRLSQS
Trigger: GGACTGCGAGAGGCGGCGGCGGAGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000567560.5
CDS CCA 72 bp GTCAGAGAGACTCCGCCCCGCCCAGAGAGCACGCGTTaGACCGCCGCCTCAACCGCTGCCAGCGGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: VRETPPRPESTR*TAASTAASGRL
Trigger: GAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGCGGAGTCTCTCTGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS CAA 72 bp TGTCAGAGAGACTCCGCCCCGCCCAGAGAGCACGCGTaGGACCGCCGCCTCAACCGCTGCCAGCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: CQRDSAPPREHA*DRRLNRCQRPP
Trigger: AGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGGCGGGGCGGAGTCTCTCTGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424560.2
CDS GCA 72 bp CCCAGAGAGCACGCGTTGGACCGCCGCCTCAACCGCTaGCAGCGGCCGCCTCTGCCGGTGCAACTACTGCCT +
Preference number: 6 (lower is better)
Translates to: PREHALDRRLNR*QRPPLPVQLLP
Trigger: AGGCAGTAGTTGCACCGGCAGAGGCGGCCGCTGGCAGCGGTTGAGGCGGCGGTCCAACGCGTGCTCTCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000566885.5
ENST00000567560.5
CDS CCA 72 bp TCTTTGCATTTCCAAAGGCCTCGGGCTCCGCCGCGGTaGCCACCGCAGCCCCCTCCTCTTCGACGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SLHFQRPRAPPR*PPQPPPLRRKL
Trigger: CAGCTTCCGTCGAAGAGGAGGGGGCTGCGGTGGCCACCGCGGCGGAGCCCGAGGCCTTTGGAAATGCAAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS CAA 90 bp GTGGTGAGGCCCGAGGCAGGTAAGAAGCCTCCTCCCCACTTCGGTTaGTCTCGGCAGTGGATCGCTCTCCCACCCACTCAGATTCTGGCG +
Preference number: 6 (lower is better)
Translates to: VVRPEAGKKPPPHFG*SRQWIALPPTQILA
Trigger: CGCCAGAATCTGAGTGGGTGGGAGAGCGATCCACTGCCGAGACAAACCGAAGTGGGGAGGAGGCTTCTTACCTGCCTCGGGCCTCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS CCA 72 bp CTCGGCAGTGGATCGCTCTCCCACCCACTCAGATTCTaGCGTATCCGTGCTCCCTCCCGATTCTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: LGSGSLSHPLRF*RIRAPSRFWTW
Trigger: CCAGGTCCAGAATCGGGAGGGAGCACGGATACGCCAGAATCTGAGTGGGTGGGAGAGCGATCCACTGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS CAA 72 bp CCCGAGGCAGGTAAGAAGCCTCCTCCCCACTTCGGTTaGTCTCGGCAGTGGATCGCTCTCCCACCCACTCAG +
Preference number: 6 (lower is better)
Translates to: PEAGKKPPPHFG*SRQWIALPPTQ
Trigger: CTGAGTGGGTGGGAGAGCGATCCACTGCCGAGACAAACCGAAGTGGGGAGGAGGCTTCTTACCTGCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS CCA 72 bp TCGGAGCGCGTCCGCGCCATTCGAGCTTTCTTTTTATaGGCCGGTCTGGCAACCTCTCTTTGGCCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: SERVRAIRAFFL*AGLATSLWPGP
Trigger: TGGGCCAGGCCAAAGAGAGGTTGCCAGACCGGCCCATAAAAAGAAAGCTCGAATGGCGCGGACGCGCTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561618.5
ENST00000563542.5
CDS GCA 72 bp ATCGCTCTCCCACCCACTCAGATTCTGGCGTATCCGTaGTCCCTCCCGATTCTGGACCTGGATTCTCAGCGC +
Preference number: 6 (lower is better)
Translates to: IALPPTQILAYP*SLPILDLDSQR
Trigger: GCGCTGAGAATCCAGGTCCAGAATCGGGAGGGAGCACGGATACGCCAGAATCTGAGTGGGTGGGAGAGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS TCA 72 bp GCAGCCCGTAACTCCAAGTACCGCTGCCTCTCTAAGTaGGCACGCCAGGAAGCTTGGAGAAGAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: AARNSKYRCLSK*ARQEAWRRAAA
Trigger: TGCAGCTGCTCTTCTCCAAGCTTCCTGGCGTGCTCACTTAGAGAGGCAGCGGTACTTGGAGTTACGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS TCA 72 bp TGGAAAGGGATGTCGCAAGGTTGGGGACGAAACCTCTaGGTTTGCGACCGTAGCTGTCGCTTTCCGGCCAAC +
Preference number: 6 (lower is better)
Translates to: WKGMSQGWGRNL*VCDRSCRFPAN
Trigger: GTTGGCCGGAAAGCGACAGCTACGGTCGCAAACTCAGAGGTTTCGTCCCCAACCTTGCGACATCCCTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS GCA 72 bp GTCAGTACTCTCTCCTCCTGCTGCATAGCTGCTTGCTaGTGTTCTGTGATGTCAGTCTCCATGGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: VSTLSSCCIAAC*CSVMSVSMAAS
Trigger: TGAGGCAGCCATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS CAA 72 bp CTCAGTCAGTACTCTCTCCTCCTGCTGCATAGCTGCTaGCTGCTGTTCTGTGATGTCAGTCTCCATGGCTGC +
Preference number: 6 (lower is better)
Translates to: LSQYSLLLLHSC*LLFCDVSLHGC
Trigger: GCAGCCATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS CAA 90 bp TCCTGCAAGTCCACACCACTCTGGCTTTGGGCTCTCTCCTGCTGCTaGTTTGGTGACTCCTTCAAGCAGTCCACTGAACTTTCACGGCTA +
Preference number: 6 (lower is better)
Translates to: SCKSTPLWLWALSCC*FGDSFKQSTELSRL
Trigger: TAGCCGTGAAAGTTCAGTGGACTGCTTGAAGGAGTCACCAAACAAGCAGCAGGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTTGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS TCA 72 bp AAGAACACGGTGACAGGTCGGTCCTTTGGGGGTAAGTaGGCAGAGGAACTGTCTTTTTGGGCAAGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: KNTVTGRSFGGK*AEELSFWARAA
Trigger: TGCAGCTCTTGCCCAAAAAGACAGTTCCTCTGCTCACTTACCCCCAAAGGACCGACCTGTCACCGTGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000568781.1
CDS GCA 72 bp GTTGAGGCTGTGGAAGAAAACCCCGTTCCATCATCCTaGGACGTTCTTCTGTTACCCGTAGCCATGACTGCA +
Preference number: 6 (lower is better)
Translates to: VEAVEENPVPSS*DVLLLPVAMTA
Trigger: TGCAGTCATGGCTACGGGTAACAGAAGAACGTCGCAGGATGATGGAACGGGGTTTTCTTCCACAGCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
CDS GCA 72 bp AAGGATCTGGGTCTCTCTCTTACAAGCACATCTTCCTaGAAGTCCACACCACTCTGGCTTTGGGCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: KDLGLSLTSTSS*KSTPLWLWALS
Trigger: GGAGAGAGCCCAAAGCCAGAGTGGTGTGGACTTGCAGGAAGATGTGCTTGTAAGAGAGAGACCCAGATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 72 bp ACTAACACACTGTGCAGGGAAGTGCTCTACAACTACTaGCATGCAGTGACCGTCAAGCAGGTGAACAGAGGC +
Preference number: 6 (lower is better)
Translates to: TNTLCREVLYNY*HAVTVKQVNRG
Trigger: GCCTCTGTTCACCTGCTTGACGGTCACTGCATGCCAGTAGTTGTAGAGCACTTCCCTGCACAGTGTGTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS CCA 72 bp AGAAGGCAACCGAACTACAACAGGAGACGATGGACCTaGATAGTTTCCTCGACGAATACGCCCCTTTCCCGA +
Preference number: 6 (lower is better)
Translates to: RRQPNYNRRRWT*IVSSTNTPLSR
Trigger: TCGGGAAAGGGGCGTATTCGTCGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTAGTTCGGTTGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568042.5
CDS CCA 72 bp CAGAGCAGGGAACTCAGCTTTAGATTCTCCCTGTACTaGAAAGGGATGTCGCAAGGTTGGGGACGAAACCTC +
Preference number: 6 (lower is better)
Translates to: QSRELSFRFSLY*KGMSQGWGRNL
Trigger: GAGGTTTCGTCCCCAACCTTGCGACATCCCTTTCCAGTACAGGGAGAATCTAAAGCTGAGTTCCCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564931.1
CDS CAA 90 bp CTCAATCTGCTCAGTCAGTACTCTCTCCTCCTGCTGCATAGCTGCTaGCTGCTGTTCTGTGATGTCAGTCTCCATGGCTGCCTCACTAGT +
Preference number: 6 (lower is better)
Translates to: LNLLSQYSLLLLHSC*LLFCDVSLHGCLTS
Trigger: ACTAGTGAGGCAGCCATGGAGACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGATTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS TCA 72 bp CGCTGCAACAATATGATTCTGCGGAGCACCTCTTGGTaGAGCAGATCTTGTAAGTGCTGTCGTTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RCNNMILRSTSW*SRSCKCCRSCS
Trigger: GGAGCAGGAACGACAGCACTTACAAGATCTGCTTCACCAAGAGGTGCTCCGCAGAATCATATTGTTGCAGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS TCA 72 bp GCTGAGGAGAGAGGATGGCCTCTCTACTCTTTGCTTTaGCTGATAGGAAGATGGTGCCACCAAACACTCTCC +
Preference number: 6 (lower is better)
Translates to: AEERGWPLYSLL*LIGRWCHQTLS
Trigger: GGAGAGTGTTTGGTGGCACCATCTTCCTATCAGTCAAAGCAAAGAGTAGAGAGGCCATCCTCTCTCCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 72 bp AGAAGGCAACCGAACTACAACAGGAGACGATGGACCTaGATAGTTTCCTCGACGAATACGCCCCTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: RRQPNYNRRRWT*IVSSTNTPLSH
Trigger: ATGGGAAAGGGGCGTATTCGTCGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTAGTTCGGTTGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568481.1
CDS CCA 72 bp AGACACAGAAGGCAACCGAACTACAACAGGAGACGATaGACCTGGATAGTTTCCTCGACGAATACGCCCCTT +
Preference number: 6 (lower is better)
Translates to: RHRRQPNYNRRR*TWIVSSTNTPL
Trigger: AAGGGGCGTATTCGTCGAGGAAACTATCCAGGTCCATCGTCTCCTGTTGTAGTTCGGTTGCCTTCTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568042.5
ENST00000568481.1
CDS CAA 72 bp ACACTTCGCTTGCGCTTAGCCTTTGGAGAAGGTTCTTaGTTCTCTTTGAATTCCTTCCGGCAACTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: TLRLRLAFGEGS*FSLNSFRQLPG
Trigger: GCCCGGCAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CAA 90 bp TTTGCTCTTTTGGCTTTCCTCATAGCTCAGAAGTTCCAAGCTTCCTaGAGAGCTCTCACTATCAGGTGTACCCCGTGGAGACTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: FALLAFLIAQKFQAS*RALTIRCTPWRLKA
Trigger: GGCCTTCAGTCTCCACGGGGTACACCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACTTCTGAGCTATGAGGAAAGCCAAAAGAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CAA 90 bp CTAATCTTCACACTTCGCTTGCGCTTAGCCTTTGGAGAAGGTTCTTaGTTCTCTTTGAATTCCTTCCGGCAACTGCCGGGCAGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: LIFTLRLRLAFGEGS*FSLNSFRQLPGSSG
Trigger: CCCAGAACTGCCCGGCAGTTGCCGGAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS GCA 72 bp TTCTCAATCTGCTCAGTCAGTACTCTCTCCTCCTGCTaGATAGCTGCTTGCTGCTGTTCTGTGATGTCAGTC +
Preference number: 6 (lower is better)
Translates to: FSICSVSTLSSC*IAACCCSVMSV
Trigger: GACTGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGATTGAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS GCA 72 bp AGGTTCTCAATCTGCTCAGTCAGTACTCTCTCCTCCTaGTGCATAGCTGCTTGCTGCTGTTCTGTGATGTCA +
Preference number: 6 (lower is better)
Translates to: RFSICSVSTLSS*CIAACCCSVMS
Trigger: TGACATCACAGAACAGCAGCAAGCAGCTATGCAGCAGGAGGAGAGAGTACTGACTGAGCAGATTGAGAACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
ENST00000568481.1
CDS CCA 72 bp CAGAGCCATTCGGGGCCACAGCATCATTCGCTGAACTaGACAATCTGTTGGATTGAGAATCCATTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QSHSGPQHHSLN*TICWIENPFFS
Trigger: GGAGAAGAATGGATTCTCAATCCAACAGATTGTCCAGTTCAGCGAATGATGCTGTGGCCCCGAATGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000569314.1
CDS CCA 72 bp ACATCTGTGCCTGCAAAGAGTGGCGAAACCTCTGACTaGGTAGTAGGTTTCACTCTGGTAGTCTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: TSVPAKSGETSD*VVGFTLVVFFS
Trigger: GGAGAAGAAGACTACCAGAGTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTCTTTGCAGGCACAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 72 bp GAGCATTCATGCCCTGGAGATCAGAAAGAGGTGTTCTaGGATTTTTCCGGGTTATACCCTGGTGTAGGATGC +
Preference number: 6 (lower is better)
Translates to: EHSCPGDQKEVF*DFSGLYPGVGC
Trigger: GCATCCTACACCAGGGTATAACCCGGAAAAATCCCAGAACACCTCTTTCTGATCTCCAGGGCATGAATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS CAA 72 bp TTGGCTTTCCTCATAGCTCAGAAGTTCCAAGCTTCCTaGAGAGCTCTCACTATCAGGTGTACCCCGTGGAGA +
Preference number: 6 (lower is better)
Translates to: LAFLIAQKFQAS*RALTIRCTPWR
Trigger: TCTCCACGGGGTACACCTGATAGTGAGAGCTCTCAAGGAAGCTTGGAACTTCTGAGCTATGAGGAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TGGATAATAACAGATGCTTGTCTCAGATGGAGGAAATaGTGCCTACACAGCAAGACCCTGAACCATCGCTGC +
Preference number: 6 (lower is better)
Translates to: WIITDACLRWRK*CLHSKTLNHRC
Trigger: GCAGCGATGGTTCAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATCTGTTATTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CAA 72 bp TTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTaGCCAGCTGTCTTCAGGGAGCTAAGGGCTAAGCTT +
Preference number: 6 (lower is better)
Translates to: LSCFRNLLEGSD*PAVFRELRAKL
Trigger: AAGCTTAGCCCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS CAA 90 bp GTTCTTCTGTTACCCGTAGCCATGACTGCAGGCTACCATAATGGATaGATCCATCAAGGTTTTTCTCTCTCAGAAGGAAGCGGTAGTCCT +
Preference number: 6 (lower is better)
Translates to: VLLLPVAMTAGYHNG*IHQGFSLSEGSGSP
Trigger: AGGACTACCGCTTCCTTCTGAGAGAGAAAAACCTTGATGGATCAATCCATTATGGTAGCCTGCAGTCATGGCTACGGGTAACAGAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000569314.1
CDS CAA 90 bp TGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTaGCCAGCTGTCTTCAGGGAGCTAAGGGCTAAGCTTCTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: CCFLSCFRNLLEGSD*PAVFRELRAKLLSD
Trigger: ATCAGAAAGAAGCTTAGCCCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000568042.5
CDS CAA 90 bp TGCTGCTTTTTAAGTTGCTTTCGCAACTTGCTGGAAGGTTCAGACTaGCCAGCTGTCTTCAGGGAGCTAAGGGCTAAGCTTCTGATTTCT +
Preference number: 6 (lower is better)
Translates to: CCFLSCFRNLLEGSD*PAVFRELRAKLLIS
Trigger: AGAAATCAGAAGCTTAGCCCTTAGCTCCCTGAAGACAGCTGGCAAGTCTGAACCTTCCAGCAAGTTGCGAAAGCAACTTAAAAAGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564571.5
CDS TCA 72 bp AATCACATCTGTGCCTGCAAAGAGTGGCGAAACCTCTaGCTGGGTAGTAGGTTTCACTCTGGTAGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: NHICACKEWRNL*LGSRFHSGSLL
Trigger: AAGAAGACTACCAGAGTGAAACCTACTACCCAGTCAGAGGTTTCGCCACTCTTTGCAGGCACAGATGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS TCA 72 bp GGTCAAACGGGACAGTTCAACCCCAAATTGTCGAGATaGCAGCTCTGGATCATACTTTTTAGAGCACTTGGC +
Preference number: 6 (lower is better)
Translates to: GQTGQFNPKLSR*QLWIILFRALG
Trigger: GCCAAGTGCTCTAAAAAGTATGATCCAGAGCTGTCATCTCGACAATTTGGGGTTGAACTGTCCCGTTTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS GCA 72 bp GAGTCTTCCCAGAACCACTCTCTCCTGAAATCACGATaGACTGATTCTTTTTGCGCTGAAGCATGGCATGAT +
Preference number: 6 (lower is better)
Translates to: ESSQNHSLLKSR*TDSFCAEAWHD
Trigger: ATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCATCGTGATTTCAGGAGAGAGTGGTTCTGGGAAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000568438.1
CDS GCA 72 bp ATAATAACAGATGCTTGTCTCAGATGGAGGAAATGCTaGCTACACAGCAAGACCCTGAACCATCGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: IITDACLRWRKC*LHSKTLNHRCN
Trigger: GTTGCAGCGATGGTTCAGGGTCTTGCTGTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATCTGTTATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TTGGTACCTTTTACTTTCCCTGTAGGCTTTCCATCTTaGTTGTATGCAAATAGCAGCCATGTGCCTGCGCCT +
Preference number: 6 (lower is better)
Translates to: LVPFTFPVGFPS*LYANSSHVPAP
Trigger: AGGCGCAGGCACATGGCTGCTATTTGCATACAAGCAAGATGGAAAGCCTACAGGGAAAGTAAAAGGTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 72 bp GCTTTTCCACTACTAAAGGAACAGTTCGGTCTTCACTaGTCAAACGGGACAGTTCAACCCCAAATTGTCGAG +
Preference number: 6 (lower is better)
Translates to: AFPLLKEQFGLH*SNGTVQPQIVE
Trigger: CTCGACAATTTGGGGTTGAACTGTCCCGTTTGACCAGTGAAGACCGAACTGTTCCTTTAGTAGTGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 72 bp CCATATTCAAATTCTCTGAGCTATCAGCAGTCCCAATaGAGGCCTCAGACTCAAGGGTTTCATCATCAGAGG +
Preference number: 6 (lower is better)
Translates to: PYSNSLSYQQSQ*RPQTQGFHHQR
Trigger: CCTCTGATGATGAAACCCTTGAGTCTGAGGCCTCCATTGGGACTGCTGATAGCTCAGAGAATTTGAATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000568042.5
CDS CCA 72 bp AAACTGGTGCCCTCCTATTCAAGATCCATATGTAGCTaGCATACAATCAGGTCTGGGGTTGTCAGGTGTACT +
Preference number: 6 (lower is better)
Translates to: KLVPSYSRSICS*HTIRSGVVRCT
Trigger: AGTACACCTGACAACCCCAGACCTGATTGTATGCCAGCTACATATGGATCTTGAATAGGAGGGCACCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS CAA 72 bp GAGGCGTTCCAGTGTATTGAGATGAGTTCGGGAGAGTaGATCAATCACAGAGTATACACCACGGATTGTCTC +
Preference number: 6 (lower is better)
Translates to: EAFQCIEMSSGE*INHRVYTTDCL
Trigger: GAGACAATCCGTGGTGTATACTCTGTGATTGATCAACTCTCCCGAACTCATCTCAATACACTGGAACGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568042.5
ENST00000568481.1
CDS CAA 90 bp ATCTGGACAGAGTCATTTTGCCAATGCATAGAATCCAAAGCCACGTaGCTAATCTTCACACTTCGCTTGCGCTTAGCCTTTGGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: IWTESFCQCIESKAT*LIFTLRLRLAFGEG
Trigger: ACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTCTATGCATTGGCAAAATGACTCTGTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CAA 90 bp ATGAAAGATGAGGCGTTCCAGTGTATTGAGATGAGTTCGGGAGAGTaGATCAATCACAGAGTATACACCACGGATTGTCTCCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: MKDEAFQCIEMSSGE*INHRVYTTDCLLPL
Trigger: GAGAGGAAGGAGACAATCCGTGGTGTATACTCTGTGATTGATCAACTCTCCCGAACTCATCTCAATACACTGGAACGCCTCATCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568042.5
ENST00000568481.1
CDS TCA 72 bp TTCAGGCACCAATTCTGTAGACCATCTGCGATCCTCTaGAGGAGAAATACCACCAAGAGAACGAACTTTCAG +
Preference number: 6 (lower is better)
Translates to: FRHQFCRPSAIL*RRNTTKRTNFQ
Trigger: CTGAAAGTTCGTTCTCTTGGTGGTATTTCTCCTTCAGAGGATCGCAGATGGTCTACAGAATTGGTGCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TGCCACTTGATAGTCTGCTCTGGCGAATCCCAGTTCTaGCATTCCAGGCAATATCAAATGTATCATGTTGGT +
Preference number: 6 (lower is better)
Translates to: CHLIVCSGESQF*HSRQYQMYHVG
Trigger: ACCAACATGATACATTTGATATTGCCTGGAATGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000563648.1
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS CCA 72 bp GCCCCTTTCCCATTGATCTACGAATCAGTGACAACCTaGTCTTTGCCTTATTCTCAGCAAATTCCAAGCTAC +
Preference number: 6 (lower is better)
Translates to: APFPLIYESVTT*SLPYSQQIPSY
Trigger: GTAGCTTGGAATTTGCTGAGAATAAGGCAAAGACCAGGTTGTCACTGATTCGTAGATCAATGGGAAAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568481.1
CDS CCA 72 bp GAGGTGTTTGGGTCATGGAGGCAGATCCCTCATGAATaGATTGGGGCTCTCTTCAAAGTAATGAATGAGTTT +
Preference number: 6 (lower is better)
Translates to: EVFGSWRQIPHE*IGALFKVMNEF
Trigger: AAACTCATTCATTACTTTGAAGAGAGCCCCAATCCATTCATGAGGGATCTGCCTCCATGACCCAAACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563925.1
CDS CAA 72 bp TTACCCGTAGCCATGACTGCAGGCTACCATAATGGATaGATCCATCAAGGTTTTTCTCTCTCAGAAGGAAGC +
Preference number: 6 (lower is better)
Translates to: LPVAMTAGYHNG*IHQGFSLSEGS
Trigger: GCTTCCTTCTGAGAGAGAAAAACCTTGATGGATCAATCCATTATGGTAGCCTGCAGTCATGGCTACGGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000569314.1
CDS CAA 72 bp CAAATATTCCATCTTTATCAAGCAAGGAGGTGCCACTaGATAGTCTGCTCTGGCGAATCCCAGTTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: QIFHLYQARRCH*IVCSGESQFCH
Trigger: ATGGCAGAACTGGGATTCGCCAGAGCAGACTATCAAGTGGCACCTCCTTGCTTGATAAAGATGGAATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000563648.1
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS CAA 72 bp GAATCCAAAGCCACGTTGCTAATCTTCACACTTCGCTaGCGCTTAGCCTTTGGAGAAGGTTCTTTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: ESKATLLIFTLR*RLAFGEGSLFS
Trigger: AGAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CAA 90 bp TTCAAATGCTCTGCACTGCTAGTCTCATTTGAGGCACTGAGGGCATaGTCCCGTGAATCAAATTTTGGACTGCTGGATATCTTAGGTGAT +
Preference number: 6 (lower is better)
Translates to: FKCSALLVSFEALRA*SRESNFGLLDILGD
Trigger: ATCACCTAAGATATCCAGCAGTCCAAAATTTGATTCACGGGACAATGCCCTCAGTGCCTCAAATGAGACTAGCAGTGCAGAGCATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CAA 90 bp GATGGTGCCACCAAACACTCTCCAATTCTTGGCTTTTCAATTGTCTaGAAGGCTTTGCGCTCCTTCTCTAAAATATCTGTTTGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: DGATKHSPILGFSIV*KALRSFSKISVCWR
Trigger: TCGCCAGCAAACAGATATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCCAAGAATTGGAGAGTGTTTGGTGGCACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 72 bp GTCTTCGTGTCTTGGGAAGAAATCCTACCATTTCCATaGCAAGTTGTAGGCGCTCAAAGTCATGTCTCAAAT +
Preference number: 6 (lower is better)
Translates to: VFVSWEEILPFP*QVVGAQSHVSN
Trigger: ATTTGAGACATGACTTTGAGCGCCTACAACTTGCCATGGAAATGGTAGGATTTCTTCCCAAGACACGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000567560.5
CDS CCA 72 bp GTTGCTAATCTTCACACTTCGCTTGCGCTTAGCCTTTaGAGAAGGTTCTTTGTTCTCTTTGAATTCCTTCCG +
Preference number: 6 (lower is better)
Translates to: VANLHTSLALSL*RRFFVLFEFLP
Trigger: CGGAAGGAATTCAAAGAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 72 bp GAGCACTTGGCTGTGGTTTTCAGACAGCACTTCTTATaGCAAGCATACTTGCATAATTTGCAAACAGAGGCT +
Preference number: 6 (lower is better)
Translates to: EHLAVVFRQHFL*QAYLHNLQTEA
Trigger: AGCCTCTGTTTGCAAATTATGCAAGTATGCTTGCCATAAGAAGTGCTGTCTGAAAACCACAGCCAAGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 72 bp GAGCATTCATGCCCTGGAGATCAGAAAGAGGTGTTCTaGGATTTTTCCGGGTTATACCAGTTTTTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: EHSCPGDQKEVF*DFSGLYQFFCE
Trigger: TTCACAGAAAAACTGGTATAACCCGGAAAAATCCCAGAACACCTCTTTCTGATCTCCAGGGCATGAATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567095.1
CDS CAA 72 bp AGCTGGGTGCCCATTCTGTCTGTCTTGGATAATTCCTaGACAGTACTAGATTGGCATGGACTTCCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: SWVPILSVLDNS*TVLDWHGLPFL
Trigger: AAGAAAAGGAAGTCCATGCCAATCTAGTACTGTCAAGGAATTATCCAAGACAGACAGAATGGGCACCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000568781.1
CDS CAA 72 bp GAGTCATTTTGCCAATGCATAGAATCCAAAGCCACGTaGCTAATCTTCACACTTCGCTTGCGCTTAGCCTTT +
Preference number: 6 (lower is better)
Translates to: ESFCQCIESKAT*LIFTLRLRLAF
Trigger: AAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTCTATGCATTGGCAAAATGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CAA 90 bp CAATGCATAGAATCCAAAGCCACGTTGCTAATCTTCACACTTCGCTaGCGCTTAGCCTTTGGAGAAGGTTCTTTGTTCTCTTTGAATTCC +
Preference number: 6 (lower is better)
Translates to: QCIESKATLLIFTLR*RLAFGEGSLFSLNS
Trigger: GGAATTCAAAGAGAACAAAGAACCTTCTCCAAAGGCTAAGCGCAAGCGAAGTGTGAAGATTAGCAACGTGGCTTTGGATTCTATGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS TCA 72 bp AAAGAACAATCCTCCCATCCTGAAGGGTCTGAACCCTaGATTTCCAGAGATCCATATCCCTTAATATTCACC +
Preference number: 6 (lower is better)
Translates to: KEQSSHPEGSEP*ISRDPYPLIFT
Trigger: GGTGAATATTAAGGGATATGGATCTCTGGAAATTCAGGGTTCAGACCCTTCAGGATGGGAGGATTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TCTAGATTTACACTCTCAGCATCTGTATCTAGACCCTaGCGAAGCTCCTTGATTTTATTAGTCGAACCAGAC +
Preference number: 6 (lower is better)
Translates to: SRFTLSASVSRP*RSSLILLVEPD
Trigger: GTCTGGTTCGACTAATAAAATCAAGGAGCTTCGGCAGGGTCTAGATACAGATGCTGAGAGTGTAAATCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS GCA 72 bp AATATGGTTCTGCTTGACCAAGTGTTTCCATTAGCTTaGTTAATGATGCCTTTGGAAGGGCAGGCTTGGATT +
Preference number: 6 (lower is better)
Translates to: NMVLLDQVFPLA*LMMPLEGQAWI
Trigger: AATCCAAGCCTGCCCTTCCAAAGGCATCATTAAGCAAGCTAATGGAAACACTTGGTCAAGCAGAACCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566744.5
CDS CCA 72 bp ATGCGATTATTTGAGAGTTTACAGGCTACATTCAGCTaGGTGCCCATTCTGTCTGTCTTGGATAATTCCTTG +
Preference number: 6 (lower is better)
Translates to: MRLFESLQATFS*VPILSVLDNSL
Trigger: CAAGGAATTATCCAAGACAGACAGAATGGGCACCCAGCTGAATGTAGCCTGTAAACTCTCAAATAATCGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000568781.1
CDS CCA 72 bp CCCTGGTGTAGGATGCTCCTGGTTTCCATTTCCAAATaGATATGTGATAACAGTTTATCAGGATTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: PWCRMLLVSISK*ICDNSLSGFVA
Trigger: GGCTACAAATCCTGATAAACTGTTATCACATATCCATTTGGAAATGGAAACCAGGAGCATCCTACACCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS CAA 72 bp GTAATTCCTCCAGAATCTCTGGATAATAACAGATGCTaGTCTCAGATGGAGGAAATGCTGCCTACACAGCAA +
Preference number: 6 (lower is better)
Translates to: VIPPESLDNNRC*SQMEEMLPTQQ
Trigger: TTGCTGTGTAGGCAGCATTTCCTCCATCTGAGACAAGCATCTGTTATTATCCAGAGATTCTGGAGGAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CAA 90 bp ACCAAACACTCTCCAATTCTTGGCTTTTCAATTGTCTTGAAGGCTTaGCGCTCCTTCTCTAAAATATCTGTTTGCTGGCGAATCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TKHSPILGFSIVLKA*RSFSKISVCWRICS
Trigger: GGAACAGATTCGCCAGCAAACAGATATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCCAAGAATTGGAGAGTGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS TCA 72 bp TCCCATCATCCATCGCCAATGCAGATGAATAAAAGCTaGAGATATTCTGCCGAAATTCCTTCAGGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: SHHPSPMQMNKS*RYSAEIPSGLF
Trigger: AAAAAGCCCTGAAGGAATTTCGGCAGAATATCTTCAGCTTTTATTCATCTGCATTGGCGATGGATGATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS TCA 72 bp ACACATAGACACACAATTTCTTCATGCAGCCTATGCTaGAACTGGTGCCCTCCTATTCAAGATCCATATGTA +
Preference number: 6 (lower is better)
Translates to: THRHTISSCSLC*NWCPPIQDPYV
Trigger: TACATATGGATCTTGAATAGGAGGGCACCAGTTTCAGCATAGGCTGCATGAAGAAATTGTGTGTCTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS TCA 72 bp ACCTCAAAATCACCTAGCCCAGGTCCTAAAACTTTATaGATATCCTCTCCTGACTTCTCCCTTGTGAGATAT +
Preference number: 6 (lower is better)
Translates to: TSKSPSPGPKTL*ISSPDFSLVRY
Trigger: ATATCTCACAAGGGAGAAGTCAGGAGAGGATATTCATAAAGTTTTAGGACCTGGGCTAGGTGATTTTGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS GCA 72 bp AGCTACAGGATCAATTCCAATCATCCCAGAGATAAATaGATTCTTGCTGCTTCTCAGAAGAGCTACAATGTC +
Preference number: 6 (lower is better)
Translates to: SYRINSNHPRDK*ILAASQKSYNV
Trigger: GACATTGTAGCTCTTCTGAGAAGCAGCAAGAATGCATTTATCTCTGGGATGATTGGAATTGATCCTGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000563925.1
ENST00000564571.5
ENST00000566885.5
ENST00000567095.1
ENST00000567560.5
CDS GCA 72 bp ACACTTGCTATGATCTGGACAGAGTCATTTTGCCAATaGATAGAATCCAAAGCCACGTTGCTAATCTTCACA +
Preference number: 6 (lower is better)
Translates to: TLAMIWTESFCQ*IESKATLLIFT
Trigger: TGTGAAGATTAGCAACGTGGCTTTGGATTCTATGCATTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 72 bp AAATCACGATGCACTGATTCTTTTTGCGCTGAAGCATaGCATGATAAGCTACATCAGCCACAGCATAAATGT +
Preference number: 6 (lower is better)
Translates to: KSRCTDSFCAEA*HDKLHQPQHKC
Trigger: ACATTTATGCTGTGGCTGATGTAGCTTATCATGCCATGCTTCAGCGCAAAAAGAATCAGTGCATCGTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000567560.5
ENST00000568438.1
CDS CCA 72 bp GAGCATTCATGCCCTGGAGATCAGAAAGAGGTGTTCTaGGATTTTTCCGGGTTATACCTAGCAAAATTTAAA +
Preference number: 6 (lower is better)
Translates to: EHSCPGDQKEVF*DFSGLYLAKFK
Trigger: TTTAAATTTTGCTAGGTATAACCCGGAAAAATCCCAGAACACCTCTTTCTGATCTCCAGGGCATGAATGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565528.1
CDS CCA 72 bp GTACAGGTTTCATTGATCTACGAATCAGTGACAACCTaGTCTTTGCCTTATTCTCAGCAAATTCCAAGCTAC +
Preference number: 6 (lower is better)
Translates to: VQVSLIYESVTT*SLPYSQQIPSY
Trigger: GTAGCTTGGAATTTGCTGAGAATAAGGCAAAGACCAGGTTGTCACTGATTCGTAGATCAATGAAACCTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568042.5
CDS CAA 72 bp ACTGACGTGAGAATTCCATGGGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCAAATATTCCATCTTTA +
Preference number: 6 (lower is better)
Translates to: TDVRIPWALSRS*LLVELANIPSL
Trigger: TAAAGATGGAATATTTGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS CAA 90 bp CTGATTAGTACTGACGTGAGAATTCCATGGGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCAAATATTCCATCTTTATCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: LISTDVRIPWALSRS*LLVELANIPSLSSK
Trigger: CTTGCTTGATAAAGATGGAATATTTGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGTCAGTACTAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS TCA 72 bp AATTCCATGGGCTCTCTCCAGGAGTTTGCTGCTAGTTaGATTAGCAAATATTCCATCTTTATCAAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: NSMGSLQEFAAS*ISKYSIFIKQG
Trigger: TCCTTGCTTGATAAAGATGGAATATTTGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000563648.1
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS GCA 72 bp AATTTTGGACTGCTGGATATCTTAGGTGATGGAAACTaGAAGTCTCCTTCATCTGAAATGACAGACTCTAGT +
Preference number: 6 (lower is better)
Translates to: NFGLLDILGDGN*KSPSSEMTDSS
Trigger: ACTAGAGTCTGTCATTTCAGATGAAGGAGACTTGCAGTTTCCATCACCTAAGATATCCAGCAGTCCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TTGAAGGCTTTGCGCTCCTTCTCTAAAATATCTGTTTaGTGGCGAATCTGTTCCATCATCTCTTTTTCATTC +
Preference number: 6 (lower is better)
Translates to: LKALRSFSKISV*WRICSIISFSF
Trigger: GAATGAAAAAGAGATGATGGAACAGATTCGCCAGCAAACAGATATTTTAGAGAAGGAGCGCAAAGCCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TCTGTTCAAATAGTGCATAGAGGTCTTTATACCGTATaGTTTTCCCATCATCCATCGCCAATGCAGATGAAT +
Preference number: 6 (lower is better)
Translates to: SVQIVHRGLYTV*FSHHPSPMQMN
Trigger: ATTCATCTGCATTGGCGATGGATGATGGGAAAAGCATACGGTATAAAGACCTCTATGCACTATTTGAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS GCA 72 bp TGGCCAACAGGTCAAATACAATCCACTGTCTGTTTTTaGAGTTTTATTACAAGACGGTCATGCCCATTTGTT +
Preference number: 6 (lower is better)
Translates to: WPTGQIQSTVCF*SFITRRSCPFV
Trigger: AACAAATGGGCATGACCGTCTTGTAATAAAACTGCAAAAACAGACAGTGGATTGTATTTGACCTGTTGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS GCA 72 bp TTTTTCTTAGCAACTGGGTTTTTAGGCACCATTCCCTaGCTGGAGTACACCTTCATAATTATAACAATCTCC +
Preference number: 6 (lower is better)
Translates to: FFLATGFLGTIP*LEYTFIIITIS
Trigger: GGAGATTGTTATAATTATGAAGGTGTACTCCAGGCAGGGAATGGTGCCTAAAAACCCAGTTGCTAAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568781.1
CDS CCA 72 bp GATAGTTCCGTTCATTATGCTCCTGATAAACGAGTCTaGACTTCTCCAGTAGATATTTTTCAACATAGGCAC +
Preference number: 6 (lower is better)
Translates to: DSSVHYAPDKRV*TSPVDIFQHRH
Trigger: GTGCCTATGTTGAAAAATATCTACTGGAGAAGTCCAGACTCGTTTATCAGGAGCATAATGAACGGAACTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356056.10
ENST00000424560.2
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
ENST00000567560.5
ENST00000568438.1
CDS CCA 72 bp TTTACATTACTGATTAGTACTGACGTGAGAATTCCATaGGCTCTCTCCAGGAGTTTGCTGCTAGTTGAATTA +
Preference number: 6 (lower is better)
Translates to: FTLLISTDVRIP*ALSRSLLLVEL
Trigger: TAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGTCAGTACTAATCAGTAATGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563648.1
CDS CAA 72 bp TTTCTCGTGAGAATTCCATGGGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCAAATATTCCATCTTTA +
Preference number: 6 (lower is better)
Translates to: FLVRIPWALSRS*LLVELANIPSL
Trigger: TAAAGATGGAATATTTGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS CAA 72 bp AGAGCTTCCCCCGCTGTGTCTTCATTTTCCAATAGTTaGTTTCTTTGGATACTTGTGTCTAGTTGGGAATTT +
Preference number: 6 (lower is better)
Translates to: RASPAVSSFSNS*FLWILVSSWEF
Trigger: AAATTCCCAACTAGACACAAGTATCCAAAGAAACAAACTATTGGAAAATGAAGACACAGCGGGGGAAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CAA 72 bp ATGGCCAACAGGTCAAATACAATCCACTGTCTGTTTTaGCAGTTTTATTACAAGACGGTCATGCCCATTTGT +
Preference number: 6 (lower is better)
Translates to: MANRSNTIHCLF*QFYYKTVMPIC
Trigger: ACAAATGGGCATGACCGTCTTGTAATAAAACTGCAAAAACAGACAGTGGATTGTATTTGACCTGTTGGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS TCA 72 bp CCAAACACTCTCCAATTCTTGGCTTTTCAATTGTCTTaGAGGCTTTGCGCTCCTTCTCTAAAATATCTGTTT +
Preference number: 6 (lower is better)
Translates to: PNTLQFLAFQLS*RLCAPSLKYLF
Trigger: AAACAGATATTTTAGAGAAGGAGCGCAAAGCCTTCAAGACAATTGAAAAGCCAAGAATTGGAGAGTGTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS GCA 72 bp TTGGTAATGCGATCTTGTAGTGTCAGTCTTGTCAGGTaGTTTAAAGAATTTACTTCTAGCAAGTGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: LVMRSCSVSLVR*FKEFTSSKCFG
Trigger: TCCAAAGCACTTGCTAGAAGTAAATTCTTTAAAGCACCTGACAAGACTGACACTACAAGATCGCATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CCA 72 bp TTGGATTTGAAATTTTTGTTTCTCGTGAGAATTCCATaGGCTCTCTCCAGGAGTTTGCTGCTAGTTGAATTA +
Preference number: 6 (lower is better)
Translates to: LDLKFLFLVRIP*ALSRSLLLVEL
Trigger: TAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAGAAACAAAAATTTCAAATCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS CCA 72 bp GGAGTACACCTTCATAATTATAACAATCTCCGCTCATaGCTTCTTTCTCTAAAAACACTTGGGAGTAAATGG +
Preference number: 6 (lower is better)
Translates to: GVHLHNYNNLRS*LLSLKTLGSKW
Trigger: CCATTTACTCCCAAGTGTTTTTAGAGAAAGAAGCCATGAGCGGAGATTGTTATAATTATGAAGGTGTACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568781.1
CDS CAA 72 bp GAATTTACTTCTAGCAAGTGCTTTGGAAGGGCAGGCTaGGATTTGAAATTTTTGTTTCTCGTGAGAATTCCA +
Preference number: 6 (lower is better)
Translates to: EFTSSKCFGRAG*DLKFLFLVRIP
Trigger: TGGAATTCTCACGAGAAACAAAAATTTCAAATCCAAGCCTGCCCTTCCAAAGCACTTGCTAGAAGTAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566885.5
CDS CAA 72 bp AAAGGTCATGAGAGGATTGGGCAAATCTCGAAGCCATaGTTTGAATACACTTGCAATGACGTGTATGTTATA +
Preference number: 6 (lower is better)
Translates to: KGHERIGQISKP*FEYTCNDVYVI
Trigger: TATAACATACACGTCATTGCAAGTGTATTCAAACAATGGCTTCGAGATTTGCCCAATCCTCTCATGACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568042.5
CDS CAA 72 bp ATTAGCTTGCTTAATGATGCCTTTGGAAGGGCAGGCTaGGATTTGAAATTTTTGTTTCTCGTGAGAATTCCA +
Preference number: 6 (lower is better)
Translates to: ISLLNDAFGRAG*DLKFLFLVRIP
Trigger: TGGAATTCTCACGAGAAACAAAAATTTCAAATCCAAGCCTGCCCTTCCAAAGGCATCATTAAGCAAGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566744.5
CDS CAA 90 bp AAATTTTTGTTTCTCGTGAGAATTCCATGGGCTCTCTCCAGGAGTTaGCTGCTAGTTGAATTAGCAAATATTCCATCTTTATCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: KFLFLVRIPWALSRS*LLVELANIPSLSSK
Trigger: CTTGCTTGATAAAGATGGAATATTTGCTAATTCAACTAGCAGCAAACTCCTGGAGAGAGCCCATGGAATTCTCACGAGAAACAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS TCA 72 bp TTAGAGCGAATGCATTTTACAAAATATGGTTCTGCTTaGCCAAGTGTTTCCATTAGCTTGCTTAATGATGCC +
Preference number: 6 (lower is better)
Translates to: LERMHFTKYGSA*PSVSISLLNDA
Trigger: GGCATCATTAAGCAAGCTAATGGAAACACTTGGTCAAGCAGAACCATATTTTGTAAAATGCATTCGCTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000563542.5
ENST00000564571.5
ENST00000566744.5
ENST00000566885.5
CDS CCA 72 bp TCCATGCTTTTTAAATCACTGACACTTGCTATGATCTaGACAGAGTCATTTTGCCAATGCATAGAATCCAAA +
Preference number: 6 (lower is better)
Translates to: SMLFKSLTLAMI*TESFCQCIESK
Trigger: TTTGGATTCTATGCATTGGCAAAATGACTCTGTCCAGATCATAGCAAGTGTCAGTGATTTAAAAAGCATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
CDS CCA 72 bp ATACAAATTCACATTACATATAGCCTTCTATTTGGCTaGGTTGGTCCAGGAAGACACTTTTTGCTCACTATA +
Preference number: 6 (lower is better)
Translates to: IQIHITYSLLFG*VGPGRHFLLTI
Trigger: TATAGTGAGCAAAAAGTGTCTTCCTGGACCAACCCAGCCAAATAGAAGGCTATATGTAATGTGAATTTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS CAA 72 bp GCCTTATTCTCAGCAAATTCCAAGCTACTGATATCTTaGAGACGAGCCTTGTATTTATTCATTTGTTCCACA +
Preference number: 6 (lower is better)
Translates to: ALFSANSKLLIS*RRALYLFICST
Trigger: TGTGGAACAAATGAATAAATACAAGGCTCGTCTCAAAGATATCAGTAGCTTGGAATTTGCTGAGAATAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356056.10
ENST00000444904.5
ENST00000561618.5
ENST00000564571.5
ENST00000564699.1
ENST00000568042.5
ENST00000568481.1
CDS CAA 72 bp AAATTCACATTACATATAGCCTTCTATTTGGCTGGGTaGGTCCAGGAAGACACTTTTTGCTCACTATATGTT +
Preference number: 6 (lower is better)
Translates to: KFTLHIAFYLAG*VQEDTFCSLYV
Trigger: AACATATAGTGAGCAAAAAGTGTCTTCCTGGACCAACCCAGCCAAATAGAAGGCTATATGTAATGTGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563542.5
CDS CAA 90 bp CATTTATACATAAATAAACATTTCACTTACAGGGGAATACTCATATaGTCCTTTGGAGTGAAGAAAATGGGCCTAGCATTTCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: HLYINKHFTYRGILI*SFGVKKMGLAFPSL
Trigger: CAGAGAGGGAAATGCTAGGCCCATTTTCTTCACTCCAAAGGACAATATGAGTATTCCCCTGTAAGTGAAATGTTTATTTATGTATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566885.5
CDS CCA 72 bp ATTATGAAAAACAAGATGACGGGTGATAACATACTTTaGATGCTTGTCCCTCCAAACCTCATATTGAAATGT +
Preference number: 6 (lower is better)
Translates to: IMKNKMTGDNIL*MLVPPNLILKC
Trigger: ACATTTCAATATGAGGTTTGGAGGGACAAGCATCCAAAGTATGTTATCACCCGTCATCTTGTTTTTCATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563925.1
CDS TCA 72 bp TTCTCTTACTGTAATAAGCTAATAAACAGCTTTGTTTaGTCAACAGGTTTTTCTGGCAGTCTATGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: FSYCNKLINSFV*STGFSGSLWSR
Trigger: TCTACTCCATAGACTGCCAGAAAAACCTGTTGATCAAACAAAGCTGTTTATTAGCTTATTACAGTAAGAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563542.5