RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO7B (Homo sapiens)

Ensembl gene IDs: ENSG00000169994

Ensembl transcript IDs: ENST00000409090.1, ENST00000409816.6, ENST00000409816.7, ENST00000428314.5, ENST00000437387.5, ENST00000491278.5, ENST00000494959.1, ENST00000496841.5

Found 721 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGGCCGCCTGCGGGGCTaGGTGGGCTTTGTATGGGGG +
Preference number: 2 (lower is better)
Translates to: PRLPTPFWARLLASLGSAGRLRG*VGFVWG
Trigger: CCCCCATACAAAGCCCACTCAGCCCCGCAGGCGGCC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGCCAAGGACAGGCCCTaGGTTGAGAGGGCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPAKDRP*VERAWE
Trigger: TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR TCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCCGCCTGCGGGGCTaGGTGGGCTTTGTATGGGGG +
Preference number: 2 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGGRLRG*VGFVWG
Trigger: CCCCCATACAAAGCCCACTCAGCCCCGCAGGCGGCC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGAGGGCCTGGGAAGGTaGCGCCAGGCTAGAGGTCGG +
Preference number: 2 (lower is better)
Translates to: VSHPPIAWGSETPDPILGEGLGR*RQARGR
Trigger: CCGACCTCTAGCCTGGCGGCACCTTCCCAGGCCCTC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGAGGGCCTGGGAAGGTaGCGCCAGGCTAGAGGTCGG +
Preference number: 2 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGEGLGR*RQARGR
Trigger: CCGACCTCTAGCCTGGCGGCACCTTCCCAGGCCCTC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCACAGAGGGGGCCGCCTaGGGGGCTGAGTGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVTEGAA*GAEWAL
Trigger: CAAAGCCCACTCAGCCCCGCAGGCGGCCCCCTCTGT...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGCCAAGGACAGGCCCTaGGTTGAGAGGGCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPAKDRP*VERAWE
Trigger: TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR CCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACTCTGGGCCCGTCTTTTaGCCTCCCTGGGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDSGPVF*PPWAAP
Trigger: GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGA...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTCTGGGCCCGTCTTTTaGCCTCCCTGGGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSGPVF*PPWAAP
Trigger: GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGGCCGCCTGCGGGGCTaGGTGGGCTTTGTATGGGGG +
Preference number: 2 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETGRLRG*VGFVWG
Trigger: CCCCCATACAAAGCCCACTCAGCCCCGCAGGCGGCC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCAGCATGGAAGGCTaGCCGCCAAGGACAGGCCCT +
Preference number: 2 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGGSMEG*PPRTGP
Trigger: AGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGGCAGCATGGAAGGCTaGCCGCCAAGGACAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVGSMEG*PPRTGP
Trigger: AGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCCAAGGACAGGCCCTaGGTTGAGAGGGCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGAKDRP*VERAWE
Trigger: TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR CCA 72 bp CTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTaGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LPAKDRPWVERA*EGAARLEVGKG
Trigger: GCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR-3UTR CAA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTTCTGGGCCCGTCTTTaGGCCTCCCTGGGCAGCGCC +
Preference number: 3 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSFWARL*ASLGSA
Trigger: GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
3UTR CCA 72 bp GGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTaGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCG +
Preference number: 3 (lower is better)
Translates to: GGVLSVSHPPIA*GSETPDPILGP
Trigger: CGGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000409816.6
ENST00000428314.5
CDS-3UTR TCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGCCCCTCGGCCGGGATaGCCAGCGGCGCATTGGCCT +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPAPRPG*PAAHWP
Trigger: AGGCCAATGCGCCGCTGGTCATCCCGGCCGAGGGGC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCGGCCGCCTGCGGGGCTaGGTGGGCTTTGTATGGGGG +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASGRLRG*VGFVWG
Trigger: CCCCCATACAAAGCCCACTCAGCCCCGCAGGCGGCC...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACAAGAGCAGCGGCCACTaGAGGCGGGCGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHKSSGH*RRAAST
Trigger: GGTGGACGCCGCCCGCCTGCAGTGGCCGCTGCTCTT...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCAGCTCCAGCCAGGTaGGGGGCTCCGCACGCACCC +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRAAPAR*GAPHAP
Trigger: GGGTGCGTGCGGAGCCCCCCACCTGGCTGGAGCTGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCAGCCTCTGCCCGCCCTaGGCCTCCCTGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPSLCPP*ASLLVA
Trigger: GGCCACCAACAGGGAGGCCCAGGGCGGGCAGAGGCT...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGTAGATGCGCCAGGGTaGCTGGCGCTGGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHVDAPG*LALALA
Trigger: GGCGAGAGCCAGCGCCAGTCACCCTGGCGCATCTAC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGTGGCGTGGACTCGCTTaGGCAGCGGCTGTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWWRGLA*AAAVAA
Trigger: CGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCA...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGCATCCGCTGCTAGGTaGTGGCCAGGGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPASAAR*WPGLGP
Trigger: AGGCCCCAGCCCTGGCCAGCACCTAGCAGCGGATGC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGAGGGCCTGGGAAGGTaGCGCCAGGCTAGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHEGLGR*RQARGR
Trigger: CCGACCTCTAGCCTGGCGGCACCTTCCCAGGCCCTC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCACAGAGGGGGCCGCCTaGGGGGCTGAGTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASTEGAA*GAEWAL
Trigger: CAAAGCCCACTCAGCCCCGCAGGCGGCCCCCTCTGT...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCCCGAGTATCGCAGCTaGCGCAGGCACAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHPEYRS*RRHSSR
Trigger: CCGGGAGCTGTGCCTGCGGCAGCTGCGATACTCGGG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCGCATGGCCTGGTACTaGCTCGCCAGCGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASRMAWY*LASGWL
Trigger: GAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCAGGGTGACTGGCGCTaGCTCTCGCCCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASQGDWR*LSPLSW
Trigger: CCAGGAGAGGGGCGAGAGCCAGCGCCAGTCACCCTG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTCCGCTGCTAGGTGCTaGCCAGGGCTGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGASAARC*PGLGPW
Trigger: CCAAGGCCCCAGCCCTGGCCAGCACCTAGCAGCGGA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGCCACGCCGGTCTTGTaGGTGGAGGGAGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAATPVL*VEGGSS
Trigger: GCTGGAGCCTCCCTCCACCCACAAGACCGGCGTGGC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACAGCCCAGGTGGTCGCTaGGGCCCTGCTTGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHSPGGR*GPACER
Trigger: TCGCTCACAAGCAGGGCCTCAGCGACCACCTGGGCT...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGCCCCTGGCATGGGCCTaGATGACCACCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWPLAWA*MTTTAL
Trigger: GAGGGCAGTGGTGGTCATTCAGGCCCATGCCAGGGG...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCGGCGTCCACCACCTaGTCTCGCACGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRAASTT*SRTASG
Trigger: ACCACTGGCCGTGCGAGAGCAGGTGGTGGACGCCGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTCCTGGAGGGCCGGGTaGTGCAGGGCCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSASWRAG*CRASVK
Trigger: CTTCACACTGGCCCTGCAGCACCCGGCCCTCCAGGA...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCACAGCCACAGCAGCTaGCAGCCCCGCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPHSHSS*QPRSSL
Trigger: CAGCGAAGAGCGGGGCTGGCAGCTGCTGTGGCTGTG...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCACAGCCACAGCAGCTaGCAGCCCCGCTCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHHSHSS*QPRSSL
Trigger: CAGCGAAGAGCGGGGCTGGCAGCTGCTGTGGCTGTG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTCTGGATTCGGCGGCTaGAGTCGGGGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGASGFGG*SRGPAA
Trigger: AGCTGCTGGCCCCCGACTGCAGCCGCCGAATCCAGA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACTGGTGGTCTCCGTCTTaGCAGCCCCAGACTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHWWSPS*QPQTRR
Trigger: GCGGCGAGTCTGGGGCTGGCAAGACGGAGACCACCA...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGGAACCTGGGCACCGTaGTCCCTGCCCAGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAGTWAP*SLPSVS
Trigger: TGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGCAGCAGCCCCTTGCTaGGCGGGAAGAGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEAAAPC*AGRGPC
Trigger: GCACGGGCCTCTTCCCGCCCAGCAAGGGGCTGCTGC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCGGCCCGCCAGGTGGATaGCATCCTCCCGCGAACACT +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASGPPGG*HPPANT
Trigger: AGTGTTCGCGGGAGGATGCCATCCACCTGGCGGGCC...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGCGCCGGTCTTGTGGGTaGAGGGAGGCTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWRRSCG*REAPAT
Trigger: TGTGGCTGGAGCCTCCCTCCACCCACAAGACCGGCG...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGCCCTCCTCTTGGCCTaGACTTGCTGGCGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPALLLA*TCWRTR
Trigger: CCTGGTGCGCCAGCAAGTCCAGGCCAAGAGGAGGGC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCTGTGCTGTGGAACCTaGGCACCGTGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASLCCGT*APCSLP
Trigger: GGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGGTAGATGCGCCAGGGTaGCTGGCGCTGGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVVDAPG*LALALA
Trigger: GGCGAGAGCCAGCGCCAGTCACCCTGGCGCATCTAC...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCAGCCTTGCTCTCTGCTaGGGCGCCGAGCTGCACGTA +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASSLALC*GAELHV
Trigger: TACGTGCAGCTCGGCGCCTCAGCAGAGAGCAAGGCT...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTGGCGCAGGCGGCAGTaGCGAGGCTCGCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPWRRRQ*RGSPTC
Trigger: ACAGGTGGGCGAGCCTCGTCACTGCCGCCTGCGCCA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGTGAACTGCCCCTCCTaGGCCGCCAGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAVNCPS*AASFLF
Trigger: GAAGAGGAAGCTGGCGGCTCAGGAGGGGCAGTTCAC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCCCATTGGCATAGGTaGGTCTCAGGCGCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAPHWHR*VSGARH
Trigger: GTGCCGAGCGCCTGAGACGCACCTATGCCAATGGGG...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCTCTCCTGGGCCATCTaGTCACACCGGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSALSWAI*SHRAMA
Trigger: TGCCATCGCCCGGTGTGAGCAGATGGCCCAGGAGAG...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCACAGCCAAGATCAGCTaGGTCTTGGGCAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSATAKIS*VLGRRG
Trigger: CCCCCGCCTGCCCAAGACGCAGCTGATCTTGGCTGT...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCGCACCAGCCCCGTCTTaGCTGTCCTGTCGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASAPAPS*LSCRSG
Trigger: GCCAGAACGACAGGACAGGCAAGACGGGGCTGGTGC...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGGGGCAGCAGCCCCTTaGTGGGCGGGAAGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGGAAAP*WAGRGP
Trigger: CGGGCCTCTTCCCGCCCAGCAAGGGGCTGCTGCCCC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGCATCCGCTGCTAGGTaGTGGCCAGGGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEASAAR*WPGLGP
Trigger: AGGCCCCAGCCCTGGCCAGCACCTAGCAGCGGATGC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCACCAGGTATCCCCTaGACAGGGCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHAPGIP*TGPAAG
Trigger: TCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAATGCGCCGGGCAGCCATaGCCCTGGCATGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWECAGQP*PWHGPE
Trigger: TTCAGGCCCATGCCAGGGGCATGGCTGCCCGGCGCA...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCCGCATCACTGAGCTaGCCTGCTGGCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRAASLS*PAGCSW
Trigger: CCAGGAGCAGCCAGCAGGGCAGCTCAGTGATGCGGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGCAGCTCCAGCCAGGTaGGGGGCTCCGCACGCACCC +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGAAPAR*GAPHAP
Trigger: GGGTGCGTGCGGAGCCCCCCACCTGGCTGGAGCTGC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGATGGCATCCATCATGTaGTCGCGCCCGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWMASIM*SRPLPR
Trigger: CCTGGGCAGCGGGCGCGACCACATGATGGATGCCAT...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGCTCGCCCACCTGTCTaGGGGCTTGGTCCTGTACAG +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPARPPV*GLGPVQ
Trigger: CTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCTCCCGACCCCATTCTaGGCCCGTCTTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASLPTPF*ARLLAS
Trigger: GGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCAGCTGCATCCGCATaGCGTTGGGCAGCAACACGC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHAAASA*RWAATR
Trigger: GCGTGTTGCTGCCCAACGCCATGCGGATGCAGCTGC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGCTGTCCTCTGCCGCATaGCCTGGTACTGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWLSSAA*PGTASP
Trigger: TGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAG...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGAGCCCAGGTGGTCGCTaGGGCCCTGCTTGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVSPGGR*GPACER
Trigger: TCGCTCACAAGCAGGGCCTCAGCGACCACCTGGGCT...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACACAGGTCCCCCTTCTTaGAGGCCAGGAGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHTGPPS*RPGGWC
Trigger: ACACCACCCTCCTGGCCTTCAAGAAGGGGGACCTGT...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCAGTCCTTGGCGTCGTTaGGCCCCTCACAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPSPWRR*APHRKC
Trigger: GCACTTCCTGTGAGGGGCTCAACGACGCCAAGGACT...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCCATAGATGCCCTTaGCAAAGGCGTCCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHAHRCP*QRRPSG
Trigger: ACCGGAGGGACGCCTTTGTCAAGGGCATCTATGGGC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCTCTCTCAGGACAGTaGCACCAGGCTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPLSGQ*HQALHP
Trigger: GGGATGCAGAGCCTGGTGGCACTGTCCTGAGAGAGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR GCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGTTGGACTTGACAGCCTaGAGCTCCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWLDLTA*SSSQVG
Trigger: CCCCACCTGGCTGGAGCTGCAGGCTGTCAAGTCCAA...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCTTGGACTTGACAGCCTaGAGCTCCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASLDLTA*SSSQVG
Trigger: CCCCACCTGGCTGGAGCTGCAGGCTGTCAAGTCCAA...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCTTCCGGAAGTAGATaGGCCAGGGTGACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPSGSR*ARVTGA
Trigger: AGCGCCAGTCACCCTGGCGCATCTACTTCCGGAAGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCACCAGCCCCGTCTTaGCTGTCCTGTCGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRAPAPS*LSCRSG
Trigger: GCCAGAACGACAGGACAGGCAAGACGGGGCTGGTGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGGGGCAGCACGGCCATaGTCACCATGTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAGAARP*SPCPSL
Trigger: CAGAGAAGGACATGGTGAGCATGGCCGTGCTGCCCC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTCCTGGAGGGCCGGGTaGTGCAGGGCCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVSWRAG*CRASVK
Trigger: CTTCACACTGGCCCTGCAGCACCCGGCCCTCCAGGA...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGGGGCAGCAGCCCCTTaGTGGGCGGGAAGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSGAAAP*WAGRGP
Trigger: CGGGCCTCTTCCCGCCCAGCAAGGGGCTGCTGCCCC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCATGCGGGAGACGTTCTaGTCTGCGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRMRETF*SAASTS
Trigger: GGAGGTGGAGGCCGCAGAGCAGAACGTCTCCCGCAT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTACTCGGAGGGCGTaGCCAGGCTCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEGTRRA*PGSAAA
Trigger: AGCAGCTGCTGAGCCTGGGCACGCCCTCCGAGTACC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACTGGGGAAGCCCGACTTaGGGATGTGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHWGSPT*GCARSP
Trigger: TGGAGACCGTGCACATCCGCAAGTCGGGCTTCCCCA...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTCCGGGCAATAGCCTaGAGGCGCTCAAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRLRAIA*RRSKPT
Trigger: CGTGGGCTTTGAGCGCCTGCAGGCTATTGCCCGGAG...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCAGCTGGACTGTCCTCTaGCGCATGGCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASSWTVL*RMAWYC
Trigger: GCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCT...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGCGCCTTGGCTTTTCTaGCCCTCGGCCGGGATGACC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEAPWLF*PSAGMT
Trigger: GGTCATCCCGGCCGAGGGGCAGAAAAGCCAAGGCGC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCTCGGTCCTTTAGGGTaGGGCTCGGCTTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHLGPLG*GSASGS
Trigger: GCTTCCTGAAGCCGAGCCCCACCCTAAAGGACCGAG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAACTCTCGCCCCTCTCCTaGGCCATCTGCTCACACCGG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWELSPLS*AICSHR
Trigger: CCGGTGTGAGCAGATGGCCCAGGAGAGGGGCGAGAG...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCTCGCCCACCTGTCTaGGGGCTTGGTCCTGTACAG +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRARPPV*GLGPVQ
Trigger: CTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTGGCTCCTCAGGACGTaGCTCTGTGAACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAWLLRT*LCELPL
Trigger: GAGGGGCAGTTCACAGAGCCACGTCCTGAGGAGCCA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCAGCAGCCCCTTGCTaGGCGGGAAGAGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGAAAPC*AGRGPC
Trigger: GCACGGGCCTCTTCCCGCCCAGCAAGGGGCTGCTGC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCCCGCACCCGTGTGTTaGCAACCACCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASPAPVC*QPPPAS
Trigger: AGATGCTGGAGGTGGTTGCCAACACACGGGTGCGGG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACGGTGCTGGCCAGGGCTaGGGCCTTGGAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDGAGQG*GLGAPL
Trigger: CAGCGGGGCTCCAAGGCCCCAGCCCTGGCCAGCACC...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGTGCTGGCCAGGGCTaGGGCCTTGGAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGGAGQG*GLGAPL
Trigger: CAGCGGGGCTCCAAGGCCCCAGCCCTGGCCAGCACC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCATCCACCAATAGCCTaGGGGTCCGAGACTCCCGAC +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPHPPIA*GSETPD
Trigger: GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATG...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCAGTCCCGGAGCTCCTaGTGCTGCACCTCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHQSRSS*CCTSSN
Trigger: GTTACTGGAGGTGCAGCACCAGGAGCTCCGGGACTG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGTTTGGGGTCCTGGGCTaGTGGTGTGAAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWFGVLG*WCEDGG
Trigger: GCCGCCATCTTCACACCACCAGCCCAGGACCCCAAA...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGAACGTGTAGCGGATaGGGAAGCCCGACTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSARTCSG*GSPTCG
Trigger: TCCGCAAGTCGGGCTTCCCCATCCGCTACACGTTCG...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCATGCCCAGGGTCATCTaGCGGAGCTTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAMPRVI*RSLPCS
Trigger: GCTGCAAGGCAAGCTCCGCCAGATGACCCTGGGCAT...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCCCGAAGGACTTTCTaGATGCTGAGCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAPRRTF*MLSAAL
Trigger: CAGAGCGGCGCTCAGCATCCAGAAAGTCCTTCGGGG...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCTGGCCCCCAATCATaGCAGGGAGGAAGCCGAACA +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPGPQS*QGGSRT
Trigger: TGTTCGGCTTCCTCCCTGCCATGATTGGGGGCCAGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCAAGTGCGGCGAGGCCTaGCCCTCCTGGCCCCCAATC +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPKCGEA*PSWPPI
Trigger: GATTGGGGGCCAGGAGGGCCAGGCCTCGCCGCACTT...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACTCTCCAGGTTGGACATaGGCCGGTCTGCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHSPGWT*AGLHQG
Trigger: GCCTTGGTGCAGACCGGCCCATGTCCAACCTGGAGA...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACTGGCGCAGGCGGCAGTaGCGAGGCTCGCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDWRRRQ*RGSPTC
Trigger: ACAGGTGGGCGAGCCTCGTCACTGCCGCCTGCGCCA...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGGCCACACTGCTGGGTaGCACAAACTCGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAGHTAG*HKLVLL
Trigger: GAGGAGTACGAGTTTGTGTCACCCAGCAGTGTGGCC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTGGCGTGGACTCGCTTaGGCAGCGGCTGTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGWRGLA*AAAVAA
Trigger: CGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGGGCCGCCTGCGGGGCTaGGTGGGCTTTGTATGGGGG +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGGRLRG*VGFVWG
Trigger: CCCCCATACAAAGCCCACTCAGCCCCGCAGGCGGCC...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGCAGCCACACGTCAGTaGTGCCCAGGGTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEAATRQ*CPGSSG
Trigger: GCCAGATGACCCTGGGCATCACTGACGTGTGGCTGC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTGGCGTAGCCCACGATaGAGTGCACCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAWRSPR*SAPSPG
Trigger: ACCTGGAGAAGGTGCACTTCATCGTGGGCTACGCCA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCTCTCCCATGGCCTGTaGTCTCGGTCCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHLSHGL*SRSFRV
Trigger: CACCCTAAAGGACCGAGAGCACAGGCCATGGGAGAG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCAAGAGCAGCGGCCACTaGAGGCGGGCGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVKSSGH*RRAAST
Trigger: GGTGGACGCCGCCCGCCTGCAGTGGCCGCTGCTCTT...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGTGGCCTTCCTGTCCTaGAGGGCCATGGCGAAAATG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAVAFLS*RAMAKM
Trigger: CATTTTCGCCATGGCCCTGCAGGACAGGAAGGCCAC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCAAGCTCAGCAGCTGTaGCGAGGGCTTAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASQAQQL*RGLSDR
Trigger: ACGGTCACTAAGCCCTCGGCACAGCTGCTGAGCTTG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCCGCTCTTCGCTGTaGCTGTTGGAGTTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRPRSSL*LLELCV
Trigger: GACGCACAACTCCAACAGGCACAGCGAAGAGCGGGG...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGTGAGATCTGTCCCCTaGGGGAAGCGGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPVRSVP*GKRLSS
Trigger: CGAAGAAAGCCGCTTCCCGCAGGGGACAGATCTCAC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAATGGCGGAGCTTGCCTTaGAGCTGCATCCGCATGGCG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEWRSLP*SCIRMA
Trigger: CGCCATGCGGATGCAGCTGCAAGGCAAGCTCCGCCA...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCTGAATGACCACCACTaGCCTCCTCTTGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSALNDHH*PPLGLD
Trigger: GTCCAGGCCAAGAGGAGGGCAGTGGTGGTCATTCAG...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGCATTGGCCTTCCTTTaGTGGAAGTTGCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAALAFL*WKLRRA
Trigger: TGCCCGGCGCAACTTCCAGCAAAGGAAGGCCAATGC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCAGCGTGTCATGGATCTaGCGCATCACTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASSVSWI*RITELP
Trigger: GGGCAGCTCAGTGATGCGGCAGATCCATGACACGCT...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCTCACACCGGGCGATaGCATCCATCATGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRAHTGR*HPSCGR
Trigger: GCGACCACATGATGGATGCCATCGCCCGGTGTGAGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCATGCGCCAGGGTGACTaGCGCTGGCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGMRQGD*RWLSPL
Trigger: GAGGGGCGAGAGCCAGCGCCAGTCACCCTGGCGCAT...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGAGATCAGCTGCGTCTTaGGCAGGCGGGGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVRSAAS*AGGGLR
Trigger: TCTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCT...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAAGATCAGCTGCGTCTTaGGCAGGCGGGGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWERSAAS*AGGGLR
Trigger: TCTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCACTCCTCATGCATCGTaGAGAGCAGCAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGATPHAS*RAAASA
Trigger: GGCAGAGGCTGCTGCTCTCCACGATGCATGAGGAGT...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGGGCCATGGCGAAAATaGACCTCTCCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPGPWRK*TSPSGP
Trigger: AGGGCCTGAAGGAGAGGTCCATTTTCGCCATGGCCC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCAGCTTTTCCTTGGGTaGCTCCTCAGGACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASQLFLG*LLRTWL
Trigger: GAGCCACGTCCTGAGGAGCCACCCAAGGAAAAGCTG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGAGGTCGACGTTGGCGTaGACTCGCTTGAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVRSTLA*TRLSSG
Trigger: GCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCT...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCGCACCCGTGTGTTaGCAACCACCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRPAPVC*QPPPAS
Trigger: AGATGCTGGAGGTGGTTGCCAACACACGGGTGCGGG...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGGGACACTAGCCAGCTaGGACCGGTCGTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWGTLAS*DRSLLN
Trigger: GTTCAACAACGACCGGTCCCAGCTGGCTAGTGTCCC...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCCGCTGCTTGTTCATaGCACTCAGGAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPAACS*HSGAAA
Trigger: TGCAGCAGCTCCTGAGTGCCATGAACAAGCAGCGGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTCCGCTGCTAGGTGCTaGCCAGGGCTGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGSAARC*PGLGPW
Trigger: CCAAGGCCCCAGCCCTGGCCAGCACCTAGCAGCGGA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGGCCAAGGACAGGCCCTaGGTTGAGAGGGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVAKDRP*VERAWE
Trigger: TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGC...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTGGGCCCGTCTTTTaGCCTCCCTGGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGSGPVF*PPWAAP
Trigger: GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGGCATCCGCATGGCGTTaGGCAGCAACACGCCGAACC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVASAWR*AATRRT
Trigger: GGTTCGGCGTGTTGCTGCCCAACGCCATGCGGATGC...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTGCCTCGCCAGCGGCTaGCTCCGGGCAATAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGCLASG*LRAIAC
Trigger: GCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCTGGATCTGCGCTTCTTaGCAGGGAGAGCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRWICAS*QGERLG
Trigger: GCCAAGGCGCTCTCCCTGCCAAGAAGCGCAGATCCA...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGCTGCCCAGCGTGTCATaGATCTGCCGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWLPSVS*ICRITE
Trigger: CTCAGTGATGCGGCAGATCCATGACACGCTGGGCAG...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGCACGGCCAGTGGTGTaGCTTGCTTCTGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAARPVV*LASECM
Trigger: CATACACTCAGAAGCAAGTCACACCACTGGCCGTGC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTGGTGGCCAGACCCATaGCCTCTGGGAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAWWPDP*PLGKRV
Trigger: AACTCTCTTTCCCAGAGGTCATGGGTCTGGCCACCA...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTGGTGGCCAGACCCATaGCCTCTGGGAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAWWPDP*PLGKRV
Trigger: AACTCTCTTTCCCAGAGGTCATGGGTCTGGCCACCA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCCATCTCCGTGTCAGTaGCGGTGTCGTAGATGGATC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHPSPCQ*RCRRWI
Trigger: GATCCATCTACGACACCGTCACTGACACGGAGATGG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTGTGGTCGCGCCCGCTaGCCAGGGACCAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPCGRAR*PGTRTC
Trigger: ACAAGTTCTGGTCCCTGGGCAGCGGGCGCGACCACA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGCTCCTGGACAGCCTTaGTCTCTGCTGAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPAPGQP*SLLRRR
Trigger: TCGGCGCCTCAGCAGAGAGCAAGGCTGTCCAGGAGC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGGCGGCGTCCACCACCTaGTCTCGCACGGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGAASTT*SRTASG
Trigger: ACCACTGGCCGTGCGAGAGCAGGTGGTGGACGCCGC...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGCAGCGATGGCCACACTaGTGGGTGACACAAACTCGT +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWQRWPH*WVTQTR
Trigger: ACGAGTTTGTGTCACCCAGCAGTGTGGCCATCGCTG...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCAGCCTGGTGGCAATaGTGTCACACACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRAAWWQ*CHTHPA
Trigger: TGCGGGATGTGTGTGACAGCATTGCCACCAGGCTGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGCACTCAGGAGCTGCTaGACATATGAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAALRSC*TYEVSR
Trigger: CCTGCTGACCTCATATGTGCAGCAGCTCCTGAGTGC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGGCCTTGGAGCCCCGCTaGTTGTTCATGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVALEPR*LFMALR
Trigger: CCTGAGTGCCATGAACAAGCAGCGGGGCTCCAAGGC...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGACAGAGGGGGCCGCCTaGGGGGCTGAGTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGTEGAA*GAEWAL
Trigger: CAAAGCCCACTCAGCCCCGCAGGCGGCCCCCTCTGT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCAGGCTCAGCAGCTaGTTGTCCTCAGCACTCACC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVPRLSS*LSSALT
Trigger: GGTGAGTGCTGAGGACAAGCAGCTGCTGAGCCTGGG...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCGGATGAGGATGGTGTaGTTGATCAGACAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGARMRMV*LIRQSR
Trigger: CCGGGACTGTCTGATCAAGCACACCATCCTCATCCG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGAGCGGTACTCCTCTTaGTCCATGGTGAACACGTGC +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPERYSS*SMVNTC
Trigger: GCACGTGTTCACCATGGAGCAAGAGGAGTACCGCTC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAACCCGACTTGCGGATGTaGACGGTCTCCATCATGCCC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEPDLRM*TVSIMP
Trigger: GGGCATGATGGAGACCGTGCACATCCGCAAGTCGGG...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCCTCTCCACCAGGCCTaGAGGGTCACAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSPLHQA*RVTAAR
Trigger: GCGGGCAGCTGTGACCCTGCAGGCCTGGTGGAGAGG...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGACATTTCCCGAGATGTaGAGGCTGAGTCCACGGGGA +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWTFPEM*RLSPRG
Trigger: TCCCCGTGGACTCAGCCTCCACATCTCGGGAAATGT...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGCTCACACCGGGCGATaGCATCCATCATGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEAHTGR*HPSCGR
Trigger: GCGACCACATGATGGATGCCATCGCCCGGTGTGAGC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCAGGGTGACTGGCGCTaGCTCTCGCCCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDQGDWR*LSPLSW
Trigger: CCAGGAGAGGGGCGAGAGCCAGCGCCAGTCACCCTG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAATTGCTTCTGAGTGTATaGGGCCTTGGCGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWELLLSV*GLGAGG
Trigger: GCCGCCTGCGCCAAGGCCCCATACACTCAGAAGCAA...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGGTGGTGTCATCTGTaGCCTTCCTGTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEGWCHL*PSCPAG
Trigger: CCCTGCAGGACAGGAAGGCCACAGATGACACCACCC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCCATGTACCGGAGGATaGCGACAAAGATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASPCTGG*RQRSGR
Trigger: CCTGCCAGATCTTTGTCGCCATCCTCCGGTACATGG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCCAGTGTGAAGATCTaGTCGGTGAGCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRASVKI*SVSSRV
Trigger: CACCCTGGAGCTCACCGACCAGATCTTCACACTGGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCTTCGCTGTGCCTGTTaGAGTTGTGCGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHLRCAC*SCASAA
Trigger: AGCAGCTGACGCACAACTCCAACAGGCACAGCGAAG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCTTCGCTGTGCCTGTTaGAGTTGTGCGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGALRCAC*SCASAA
Trigger: AGCAGCTGACGCACAACTCCAACAGGCACAGCGAAG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCATAAACTTCTGGGCATaGGGCAGCAGCCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSAINFWA*GSSPLL
Trigger: CAGCAAGGGGCTGCTGCCCCATGCCCAGAAGTTTAT...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGTGTCTATAAACTTCTaGGCATGGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHVSINF*AWGSSP
Trigger: GGGGCTGCTGCCCCATGCCCAGAAGTTTATAGACAC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCCAGCTGCAGCCTGGTaGCAATGCTGTCACACACAT +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASPAAAW*QCCHTH
Trigger: ATGTGTGTGACAGCATTGCCACCAGGCTGCAGCTGG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCATCCGCGCAGGTACTTaGGCAGCTCCTGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASIRAGT*AAPGGN
Trigger: ATTACCACCAGGAGCTGCCCAAGTACCTGCGCGGAT...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTCCCGCGAACACTTGTaGAATCCGCGCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSASREHL*NPRRYL
Trigger: CAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGA...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGTCTGGGCCCGTCTTTTaGCCTCCCTGGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSGPVF*PPWAAP
Trigger: GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGA...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAACATCCACCAATAGCCTaGGGGTCCGAGACTCCCGAC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEHPPIA*GSETPD
Trigger: GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATG...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCACTGGAGGATCTTCATaGCCGAGCGGATGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRTGGSS*PSGCGR
Trigger: ACGCCCACATCCGCTCGGCCATGAAGATCCTCCAGT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCTCGGAGTCGGAGAACTaGAGGATCTTCATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASSESEN*RIFMAE
Trigger: CTCGGCCATGAAGATCCTCCAGTTCTCCGACTCCGA...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGTAACTTCATCACGGTaGGAAAGGCGGGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPVTSSR*ERRASP
Trigger: TGGAGACGCCCGCCTTTCCCACCGTGATGAAGTTAC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCTCCGGTCAGCAGCCTaGGCAATGTTCAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVLRSAA*AMFRDL
Trigger: CAGGTCCCTGAACATTGCCCAGGCTGCTGACCGGAG...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCTCTGCCGCATGGCCTaGTACTGCCTCGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSLCRMA*YCLASG
Trigger: GCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAG...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCAGGGAGAGCGCCTTaGCTTTTCTGCCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGAGRAP*LFCPSA
Trigger: GGCCGAGGGGCAGAAAAGCCAAGGCGCTCTCCCTGC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCCAGGCTGCTTGTTTTaGAGTTCTCCGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHPGCLF*SSPRAA
Trigger: AGCAGCTCTCGGAGAACTTCAAAACAAGCAGCCTGG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCTTCATGAACCTCTCTaGGGGTGGGAAGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVLHEPL*GWEAAE
Trigger: CTCGGCTGCTTCCCACCCTCAGAGAGGTTCATGAAG...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTGTGCTTCTTGGACTTaGCAGCCTGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVCASWT*QPAAPA
Trigger: GGCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACA...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTGACTTGCTTCTaGGTGTATGGGGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEGVTCF*VYGALA
Trigger: CGCCAAGGCCCCATACACTCAGAAGCAAGTCACACC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCAGGACATCAGGCGTGTaGGGTTCTCAGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRRTSGV*GSQAPV
Trigger: AACTGGTGCCTGAGAACCTCACACGCCTGATGTCCT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAATGGTCTTGGGGTGGATaGGCAGAACCCCATGTCGGT +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEWSWGG*AEPHVG
Trigger: ACCGACATGGGGTTCTGCTCATCCACCCCAAGACCA...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGAGCTGCTGCACATATaGGGTCAGCAGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHELLHI*GQQVIH
Trigger: ATGGATGACCTGCTGACCTCATATGTGCAGCAGCTC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAGCTGCTGCACATATaGGGTCAGCAGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWELLHI*GQQVIH
Trigger: ATGGATGACCTGCTGACCTCATATGTGCAGCAGCTC...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGTCTGGATTCGGCGGCTaGAGTCGGGGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSGFGG*SRGPAA
Trigger: AGCTGCTGGCCCCCGACTGCAGCCGCCGAATCCAGA...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACAGATCTTGTGGCAGATaGGGGAGACGTTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHRSCGR*GRRSAL
Trigger: CAGAGCAGAACGTCTCCCGCATCTGCCACAAGATCT...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGAGATCTTGTGGCAGATaGGGGAGACGTTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWRSCGR*GRRSAL
Trigger: CAGAGCAGAACGTCTCCCGCATCTGCCACAAGATCT...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACATGGCACTCAGGAGCTaGTGCACATATGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHMALRS*CTYEVS
Trigger: GCTGACCTCATATGTGCAGCAGCTCCTGAGTGCCAT...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGGCAGCATGGAAGGCTaGCCGCCAAGGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSGSMEG*PPRTGP
Trigger: AGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGGGCAGCATGGAAGGCTaGCCGCCAAGGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGGSMEG*PPRTGP
Trigger: AGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCC...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGACTTTGCCTGGCTTTaGCTCTTTGATGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGADFAWL*LFDDAP
Trigger: GGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGAAGAGATGGTTTCCTaGCTTTGCCTGGCGGATGGT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAEEMVS*LCLADG
Trigger: ACCATCCGCCAGGCAAAGGCAGGAAACCATCTCTTC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGCCCCTGCACAGGGCCTaGAGCTGGACTGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGPLHRA*SWTVLC
Trigger: GCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGG...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGTGTCGTAGATGGATCTaGGCTTCTTGGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWCRRWI*ASWQGE
Trigger: CTCTCCCTGCCAAGAAGCGCAGATCCATCTACGACA...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGCCATCAGGCTCCAATaGCTCCTCTCCAATGTTCAG +
Preference number: 4 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPAIRLQ*LLSNVQ
Trigger: CTGAACATTGGAGAGGAGGCATTGGAGCCTGATGGC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCCGCACGCACCCCATTaGCATAGGTGCGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGPHAPH*HRCVSG
Trigger: GCCTGAGACGCACCTATGCCAATGGGGTGCGTGCGG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCACATTTCCCGAGATGTaGAGGCTGAGTCCACGGGGA +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRTFPEM*RLSPRG
Trigger: TCCCCGTGGACTCAGCCTCCACATCTCGGGAAATGT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGTACACGGCGACCTaGAGGGAGAAGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGSYTAT*REKPRW
Trigger: CCACCTGGGCTTCTCCCTCCAGGTCGCCGTGTACGA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGATGGCATCCATCATGTaGTCGCGCCCGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGMASIM*SRPLPR
Trigger: CCTGGGCAGCGGGCGCGACCACATGATGGATGCCAT...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTTGCTTCTGAGTGTATaGGGCCTTGGCGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPLLLSV*GLGAGG
Trigger: GCCGCCTGCGCCAAGGCCCCATACACTCAGAAGCAA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTAGCCTCTGCCCGCCCTaGGCCTCCCTGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETSLCPP*ASLLVA
Trigger: GGCCACCAACAGGGAGGCCCAGGGCGGGCAGAGGCT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCGATGGCCACACTGCTaGGTGACACAAACTCGTACT +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASRWPHC*VTQTRT
Trigger: AGTACGAGTTTGTGTCACCCAGCAGTGTGGCCATCG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCAGCTTTTCCTTGGGTaGCTCCTCAGGACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVQLFLG*LLRTWL
Trigger: GAGCCACGTCCTGAGGAGCCACCCAAGGAAAAGCTG...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGGCCCGCCAGGTGGATaGCATCCTCCCGCGAACACT +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVGPPGG*HPPANT
Trigger: AGTGTTCGCGGGAGGATGCCATCCACCTGGCGGGCC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCAGGCGGATCCGAAGGTaGGCCACCGGCAGATCCACT +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGRRIRR*ATGRST
Trigger: AGTGGATCTGCCGGTGGCCCACCTTCGGATCCGCCT...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGTCCTTGGTCTTGGGGTaGATGAGCAGAACCCCATGT +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWSLVLG*MSRTPC
Trigger: ACATGGGGTTCTGCTCATCCACCCCAAGACCAAGGA...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCTCCCGACCCCATTCTaGGCCCGTCTTTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGLPTPF*ARLLAS
Trigger: GGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCAAGTGCAGTTCCCCATaGTCAGGTAGTGGTACTCGG +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAKCSSP*SGSGTR
Trigger: CCGAGTACCACTACCTGACCATGGGGAACTGCACTT...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTCCCATGGCCCAGCTTaGTCTCTGCTAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSASHGPA*SLLTPS
Trigger: ACTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGA...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCACTGCCCTCCTCTTaGCCTGGACTTGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGPLPSS*PGLAGA
Trigger: TGCGCCAGCAAGTCCAGGCCAAGAGGAGGGCAGTGG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCAATGTTCAGCTGGCTaGCCACCTGTGCAGATCTAC +
Preference number: 4 (lower is better)
Translates to: GRCRQARGREGRLSRHASQCSAG*PPVQIY
Trigger: GTAGATCTGCACAGGTGGCCAGCCAGCTGAACATTG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAGCCTTGCTCTCTGCTaGGGCGCCGAGCTGCACGTA +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSLALC*GAELHV
Trigger: TACGTGCAGCTCGGCGCCTCAGCAGAGAGCAAGGCT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGGTGAACTGCCCCTCCTaGGCCGCCAGCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGVNCPS*AASFLF
Trigger: GAAGAGGAAGCTGGCGGCTCAGGAGGGGCAGTTCAC...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGAGGACATCAGGCGTGTaGGGTTCTCAGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVRTSGV*GSQAPV
Trigger: AACTGGTGCCTGAGAACCTCACACGCCTGATGTCCT...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGGAGGGCCGTTTATTTaGGTCTGCAGACTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHGGPFI*VCRLEE
Trigger: CTCTTCAAGTCTGCAGACTCAAATAAACGGCCCTCC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCACGAGGATCAGCTTaGAATTCCTCCTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPRGSA*NSSCCS
Trigger: ACTGCAACAGGAGGAATTTCAAGCTGATCCTCGTGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGTGTGTGTGGCTGGCTaGTTTCTGGAAGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWVCVAG*FLEVSH
Trigger: GTGACTTACTTCCAGAAATCAGCCAGCCACACACAC...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGAGCAGCCGCGCCCTTTaGACAGCCCATCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGSSRAL*TAHLLP
Trigger: TGGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCCCCATTGGCATAGGTaGGTCTCAGGCGCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVPHWHR*VSGARH
Trigger: GTGCCGAGCGCCTGAGACGCACCTATGCCAATGGGG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCACTTGGATGGGGATGTaGTTCTTGGACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSATWMGM*FLDLTA
Trigger: GGCTGTCAAGTCCAAGAAGCACATCCCCATCCAAGT...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGTGTGGTCGCGCCCGCTaGCCAGGGACCAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGCGRAR*PGTRTC
Trigger: ACAAGTTCTGGTCCCTGGGCAGCGGGCGCGACCACA...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTCTCCTGGGCCATCTaGTCACACCGGGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGLSWAI*SHRAMA
Trigger: TGCCATCGCCCGGTGTGAGCAGATGGCCCAGGAGAG...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTCCTCCCGGGAGTCGTaGCAGGGGGTGAAGAATTCC +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGSSRES*QGVKNS
Trigger: GGAATTCTTCACCCCCTGGCACGACTCCCGGGAGGA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCTCCTGGACAGCCTTaGTCTCTGCTGAGGCGCCGA +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGAPGQP*SLLRRR
Trigger: TCGGCGCCTCAGCAGAGAGCAAGGCTGTCCAGGAGC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCACAGCCAAGATCAGCTaGGTCTTGGGCAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVTAKIS*VLGRRG
Trigger: CCCCCGCCTGCCCAAGACGCAGCTGATCTTGGCTGT...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAAACTCCTCCAGGGTGTaGAGCTTTTCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWENSSRV*SFSLGG
Trigger: GCCACCCAAGGAAAAGCTGCACACCCTGGAGGAGTT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACTGGAGGGCCGGGTGCTaGAGGGCCAGTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDWRAGC*RASVKI
Trigger: GATCTTCACACTGGCCCTGCAGCACCCGGCCCTCCA...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTGGAGGGCCGGGTGCTaGAGGGCCAGTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVWRAGC*RASVKI
Trigger: GATCTTCACACTGGCCCTGCAGCACCCGGCCCTCCA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACATGCGGGAGACGTTCTaGTCTGCGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDMRETF*SAASTS
Trigger: GGAGGTGGAGGCCGCAGAGCAGAACGTCTCCCGCAT...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGAGGGCCTGGGAAGGTaGCGCCAGGCTAGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETEGLGR*RQARGR
Trigger: CCGACCTCTAGCCTGGCGGCACCTTCCCAGGCCCTC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGTTGTGCACCATGCCTaGCTCGTTCAGGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGVVHHA*LVQVPQ
Trigger: CTGGGGGACCTGAACGAGGCAGGCATGGTGCACAAC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCGGAGCTCCTGGTGCTaGACCTCCAGTAACTTCATC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVRSSWC*TSSNFI
Trigger: GATGAAGTTACTGGAGGTGCAGCACCAGGAGCTCCG...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTCCCGGAGCTCCTGGTaGTGCACCTCCAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPSRSSW*CTSSNF
Trigger: GAAGTTACTGGAGGTGCAGCACCAGGAGCTCCGGGA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAAACACGCCGAACCTCTaGGAGAACTCCTCGAACGTG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWENTPNL*ENSSNV
Trigger: CACGTTCGAGGAGTTCTCGCAGAGGTTCGGCGTGTT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACGGGCACCGTGCTCCCTaGCCAGCGTGTCATGGATCT +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDGHRAP*PACHGS
Trigger: AGATCCATGACACGCTGGGCAGGGAGCACGGTGCCC...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGGACATGGGCCGGTCTaGACCAAGGCCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVGHGPV*TKAIRL
Trigger: GAGCCTGATGGCCTTGGTGCAGACCGGCCCATGTCC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTATGCGCCAGGGTGACTaGCGCTGGCTCTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETMRQGD*RWLSPL
Trigger: GAGGGGCGAGAGCCAGCGCCAGTCACCCTGGCGCAT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGTGTAGAGGCAGGCCATaGGCACCAGCCCCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGCRGRP*APAPSC
Trigger: GCAAGACGGGGCTGGTGCCCATGGCCTGCCTCTACA...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTGTAGAGGCAGGCCATaGGCACCAGCCCCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSCRGRP*APAPSC
Trigger: GCAAGACGGGGCTGGTGCCCATGGCCTGCCTCTACA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTGGCTCCTCAGGACGTaGCTCTGTGAACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGWLLRT*LCELPL
Trigger: GAGGGGCAGTTCACAGAGCCACGTCCTGAGGAGCCA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTGTGCAGCTTTTCCTTaGGTGGCTCCTCAGGACGTG +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVCAAFP*VAPQDV
Trigger: CACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACA...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGCCAGTGTGAAGATCTaGTCGGTGAGCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPASVKI*SVSSRV
Trigger: CACCCTGGAGCTCACCGACCAGATCTTCACACTGGC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAATAAACTTCTGGGCATaGGGCAGCAGCCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEINFWA*GSSPLL
Trigger: CAGCAAGGGGCTGCTGCCCCATGCCCAGAAGTTTAT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCCTCCAGCATCTCACTaGTGTCATTGGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHPPASH*CHWGSR
Trigger: TCTACTTCCCCAATGACACCAGTGAGATGCTGGAGG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCTCCAGCATCTCACTaGTGTCATTGGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPPASH*CHWGSR
Trigger: TCTACTTCCCCAATGACACCAGTGAGATGCTGGAGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGATCCGCGCAGGTACTTaGGCAGCTCCTGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVIRAGT*AAPGGN
Trigger: ATTACCACCAGGAGCTGCCCAAGTACCTGCGCGGAT...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGAGGCGGATCCGAAGGTaGGCCACCGGCAGATCCACT +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGRRIRR*ATGRST
Trigger: AGTGGATCTGCCGGTGGCCCACCTTCGGATCCGCCT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAAGCAGTTGTTGGCGATaGCAAAGACATGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWESSCWR*QRHAGA
Trigger: TGCCCCCGCATGTCTTTGCCATCGCCAACAACTGCT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCCCTCCGCACATTTTTaGGGTCCTGGGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGPSAHF*GPGLVV
Trigger: CACCACCAGCCCAGGACCCCAAAAATGTGCGGAGGG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTTGGCCTTCCTTTGCTaGAAGTTGCGCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGLAFLC*KLRRAA
Trigger: GGCTGCCCGGCGCAACTTCCAGCAAAGGAAGGCCAA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAAGATCTACTGTGCTGTaGAACCTGGGCACCGTGCTC +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWERSTVL*NLGTVL
Trigger: GAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCTTCATGAACCTCTCTaGGGGTGGGAAGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGLHEPL*GWEAAE
Trigger: CTCGGCTGCTTCCCACCCTCAGAGAGGTTCATGAAG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGACAGGTCCCCCTTCTTaGAGGCCAGGAGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGTGPPS*RPGGWC
Trigger: ACACCACCCTCCTGGCCTTCAAGAAGGGGGACCTGT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCCCCTGCTTCTTTGTaGGGACCAACAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGAPASL*GPTGPP
Trigger: AGGGGGACCTGTTGGTCCTCACAAAGAAGCAGGGGC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGCCCCTGCTTCTTTGTaGGGACCAACAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSAPASL*GPTGPP
Trigger: AGGGGGACCTGTTGGTCCTCACAAAGAAGCAGGGGC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTGGCATGGGCCTGAATaGCCACCACTGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSWHGPE*PPLPSS
Trigger: AGAGGAGGGCAGTGGTGGTCATTCAGGCCCATGCCA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCTGAGAGGTCCCATATaGAGGGCACCTCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDLRGPI*RAPLQR
Trigger: GCGCTGGAGAGGTGCCCTGCATATGGGACCTCTCAG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCTTCCGGAAGTAGATaGGCCAGGGTGACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGPSGSR*ARVTGA
Trigger: AGCGCCAGTCACCCTGGCGCATCTACTTCCGGAAGG...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGTCCTCCCGGGAGTCGTaGCAGGGGGTGAAGAATTCC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSSRES*QGVKNS
Trigger: GGAATTCTTCACCCCCTGGCACGACTCCCGGGAGGA...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGTGGCCTTCCTGTCCTaGAGGGCCATGGCGAAAATG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGVAFLS*RAMAKM
Trigger: CATTTTCGCCATGGCCCTGCAGGACAGGAAGGCCAC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCAGCCTGGTGGCAATaGTGTCACACACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGAAWWQ*CHTHPA
Trigger: TGCGGGATGTGTGTGACAGCATTGCCACCAGGCTGC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCATGGAGTATGGTGTCTaGATTCACATCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAMEYGV*IHILPW
Trigger: CCAGGGAAGGATGTGAATGCAGACACCATACTCCAT...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGAAGGCTCCGAGGTTTaGTTCACCTCGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPEGSEV*FTSKKA
Trigger: CGCCTTCTTCGAGGTGAAGCAAACCTCGGAGCCTTC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGCCTTGGAGCCCCGCTaGTTGTTCATGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVALEPR*LFMALR
Trigger: CCTGAGTGCCATGAACAAGCAGCGGGGCTCCAAGGC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCGGATCAGGAGGTTGTaGACCATGCCTGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGRIRRL*TMPASF
Trigger: GAACGAGGCAGGCATGGTGCACAACCTCCTGATCCG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGAGAAATTGCTCGATaGGCGCGCCCTCGATCACCC +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGGEIAR*ARPRSP
Trigger: GGGTGATCGAGGGCGCGCGCATCGAGCAATTTCTCC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCCCCTCACAGGAAGTaGAGTTCCCCATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGAPHRK*SSPWSG
Trigger: ACCTGACCATGGGGAACTGCACTTCCTGTGAGGGGC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCACGCTGTTCAGCTTTTaGAGCATGGTGAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: PRLPTPFWARLLASLGSATLFSF*SMVRSV
Trigger: GACAGATCTCACCATGCTGCAAAAGCTGAACAGCGT...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGAGCTGCCCTGCTGGCTaGTCCTGGCATACAGCACTG +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGSCPAG*SWHTAL
Trigger: CAGTGCTGTATGCCAGGAGCAGCCAGCAGGGCAGCT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCTGTACAGCTTGTaGGGGATGCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGVLYSL*GMQLGS
Trigger: GCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGAC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGGTCCTGTACAGCTTGTaGGGGATGCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGVLYSL*GMQLGS
Trigger: GCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGAC...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGACCTGTCTGGGGGCTTaGTCCTGTACAGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGTCLGA*SCTACG
Trigger: CCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGT...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGACTCCTCATGCATCGTaGAGAGCAGCAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGTPHAS*RAAASA
Trigger: GGCAGAGGCTGCTGCTCTCCACGATGCATGAGGAGT...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGGTGGTGTCATCTGTaGCCTTCCTGTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGGWCHL*PSCPAG
Trigger: CCCTGCAGGACAGGAAGGCCACAGATGACACCACCC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTGTCCTGTCGTTCTaGCCGAGGGTCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGPVLSF*PRVQFS
Trigger: TGAGAACTGGACCCTCGGCCAGAACGACAGGACAGG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCCCATGTACCGGAGGATaGCGACAAAGATCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPPCTGG*RQRSGR
Trigger: CCTGCCAGATCTTTGTCGCCATCCTCCGGTACATGG...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGTCCTCAGGACCTTCTaGATTCGGCGGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSVLRTF*IRRLQS
Trigger: CGACTGCAGCCGCCGAATCCAGAAGGTCCTGAGGAC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTCTCACTGGTGTCATTaGGGAAGTAGATCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRLPAKDRPWVERAWEGASHWCH*GSRSCG
Trigger: GCCACAAGATCTACTTCCCCAATGACACCAGTGAGA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTCAGGAAGGCCACCTTaGCCTCCTCCACTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPSGRPP*PPPLSC
Trigger: ACAAGACAGTGGAGGAGGCCAAGGTGGCCTTCCTGA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGGCTCCAGCCACACGTaGTCACCCAGCCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETGSSHT*SPSLNP
Trigger: GGGGTTCAGGCTGGGTGACCACGTGTGGCTGGAGCC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGCCAGCAGGTCCAGGGTaGGCCGATTGTCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGPAGPG*ADCRCS
Trigger: ACTACACCGACAATCGGCCCACCCTGGACCTGCTGG...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTGGCGGATGGTCCCATaGCCCAGCTTGGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVWRMVP*PSLVSA
Trigger: AGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTTTCCTGCCTTTGCCTaGCGGATGGTCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSFPAFA*RMVPWP
Trigger: GGGCCATGGGACCATCCGCCAGGCAAAGGCAGGAAA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTTGGCCTGGACTTGCTaGCGCACCAGGTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVLAWTC*RTRYPL
Trigger: CAGGGGATACCTGGTGCGCCAGCAAGTCCAGGCCAA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCATACAGCACTGGCTCTaGGAGATCACCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRIQHWL*EITHEP
Trigger: AGGTTCATGGGTGATCTCCCAGAGCCAGTGCTGTAT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCCCAGGCTGCTTGTTTTaGAGTTCTCCGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPPGCLF*SSPRAA
Trigger: AGCAGCTCTCGGAGAACTTCAAAACAAGCAGCCTGG...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCTGAGGCCCTGCTTGTaGGCGATGTGCATGCACATT +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGLRPCL*AMCMHI
Trigger: AATGTGCATGCACATCGCTCACAAGCAGGGCCTCAG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGGTGTGACTTGCTTCTaGGTGTATGGGGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVGVTCF*VYGALA
Trigger: CGCCAAGGCCCCATACACTCAGAAGCAAGTCACACC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGCACGGCCAGTGGTGTaGCTTGCTTCTGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGARPVV*LASECM
Trigger: CATACACTCAGAAGCAAGTCACACCACTGGCCGTGC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGGCCACACTGCTGGGTaGCACAAACTCGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVGHTAG*HKLVLL
Trigger: GAGGAGTACGAGTTTGTGTCACCCAGCAGTGTGGCC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGCTGATGACCTTGTCTaGAATCTTGATGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWADDLV*NLDEEA
Trigger: AGCCTCTTCATCAAGATTTCAGACAAGGTCATCAGC...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTGGTCTTGGGGTGGATaGGCAGAACCCCATGTCGGT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSWSWGG*AEPHVG
Trigger: ACCGACATGGGGTTCTGCTCATCCACCCCAAGACCA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCTCCAGGAGTTTTTATTaGACATTCTGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRSRSFY*TFWWGG
Trigger: CCCACCCCACCAGAATGTTCAATAAAAACTCCTGGA...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCGAAGACCGAAGCCATaGACCCCACATTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDRRPKP*TPHSPG
Trigger: ACCTGGGGAATGTGGGGTTCATGGCTTCGGTCTTCG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCGTCTCCATCACGTCTaGGGCGTCCAGGTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDRLHHV*GVQVLE
Trigger: TTCGAGAACCTGGACGCCTCAGACGTGATGGAGACG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCCCTCTTGCTCCATGGTaGACACGTGCTGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPPLAPW*TRAAQR
Trigger: TCTTTGTGCAGCACGTGTTCACCATGGAGCAAGAGG...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGCTTTTGCAGCATGGTaGGATCTGTCCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSAFAAW*DLSPAG
Trigger: TCCCGCAGGGGACAGATCTCACCATGCTGCAAAAGC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGGACTTTCTGGATGCTaGGCGCCGCTCTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSGLSGC*APLCLA
Trigger: TGCTAGACAGAGCGGCGCTCAGCATCCAGAAAGTCC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGATCTGCCGCATCACTaGGCTGCCCTGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETDLPHH*AALLAA
Trigger: AGCAGCCAGCAGGGCAGCTCAGTGATGCGGCAGATC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCAGCGATGGCCACACTaGTGGGTGACACAAACTCGT +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGQRWPH*WVTQTR
Trigger: ACGAGTTTGTGTCACCCAGCAGTGTGGCCATCGCTG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCAAGCTCAGCAGCTGTaGCGAGGGCTTAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVQAQQL*RGLSDR
Trigger: ACGGTCACTAAGCCCTCGGCACAGCTGCTGAGCTTG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTCATCTGGCGGAGCTTaGCTTGCAGCTGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSSGGA*LAAASA
Trigger: TGCGGATGCAGCTGCAAGGCAAGCTCCGCCAGATGA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTTCCTTTGCTGGAAGTTaGGCCGGGCAGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETSFAGS*AGQPCP
Trigger: GGGGCATGGCTGCCCGGCGCAACTTCCAGCAAAGGA...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCTGGCTGGCCACCTGTaGAGATCTACTGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSLAGHL*RSTVLW
Trigger: CCACAGCACAGTAGATCTGCACAGGTGGCCAGCCAG...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGACCTGTCTGGGGGCTTaGTCCTGTACAGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGTCLGA*SCTACG
Trigger: CCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGCCTGTCCTGTCGTTCTaGCCGAGGGTCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGPVLSF*PRVQFS
Trigger: TGAGAACTGGACCCTCGGCCAGAACGACAGGACAGG...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTGTGCAGCTTTTCCTTaGGTGGCTCCTCAGGACGTG +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGCAAFP*VAPQDV
Trigger: CACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTAGGTCGACGTTGGCGTaGACTCGCTTGAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETRSTLA*TRLSSG
Trigger: GCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCAGCTGCAGCCTGGTaGCAATGCTGTCACACACAT +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGPAAAW*QCCHTH
Trigger: ATGTGTGTGACAGCATTGCCACCAGGCTGCAGCTGG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGCAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGGTGGTAATGGAGTATaGTGTCTGCATTCACATCCT +
Preference number: 4 (lower is better)
Translates to: GQHGRLPAKDRPWVERAWGGNGV*CLHSHP
Trigger: AGGATGTGAATGCAGACACCATACTCCATTACCACC...CCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGGGACACTAGCCAGCTaGGACCGGTCGTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSGTLAS*DRSLLN
Trigger: GTTCAACAACGACCGGTCCCAGCTGGCTAGTGTCCC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGTGTCCAGGAGGCCGATaGCCCTCCGCACATTTTTGG +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGCPGGR*PSAHFW
Trigger: CCAAAAATGTGCGGAGGGCCATCGGCCTCCTGGACA...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGGCAATGCCAAATCTaGCATCGTGGATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEGQCQI*HRGCSW
Trigger: CCAAGAACATCCACGATGCCAGATTTGGCATTGCCC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCACAGGGCCTGCAGCTaGACTGTCCTCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETHRACS*TVLCRM
Trigger: CATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTG...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTGGCATACAGCACTaGCTCTGGGAGATCACCCAT +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGPGIQH*LWEITH
Trigger: ATGGGTGATCTCCCAGAGCCAGTGCTGTATGCCAGG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGGCCCTTGGCCGATaGAGTTCAGTAGATACTTCA +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGPALGR*SSVDTS
Trigger: TGAAGTATCTACTGAACTTCATCGGCCAAGGGCCGG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCTGAGGCCCTGCTTGTaGGCGATGTGCATGCACATT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSLRPCL*AMCMHI
Trigger: AATGTGCATGCACATCGCTCACAAGCAGGGCCTCAG...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAGTCGTGCCAGGGGGTaGAGAATTCCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSRARG*RIPSGS
Trigger: ACTTCCGGAAGGAATTCTTCACCCCCTGGCACGACT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCAGTCGTGCCAGGGGGTaGAGAATTCCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSRARG*RIPSGS
Trigger: ACTTCCGGAAGGAATTCTTCACCCCCTGGCACGACT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGCCACAATTTCCGCATaGAGTACACCTGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: VSHPPIAWGSETPDPILGATISA*STPGRG
Trigger: TCCCCTACCAGGTGTACTTCATGCGGAAATTGTGGC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGCCACAATTTCCGCATaGAGTACACCTGGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGATISA*STPGRG
Trigger: TCCCCTACCAGGTGTACTTCATGCGGAAATTGTGGC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCAGTGCCACCAGGCTCTaGATCCCTACTCGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSATRL*IPTRFL
Trigger: GAGGAATCGAGTAGGGATGCAGAGCCTGGTGGCACT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGGGGCAGCACGGCCATaGTCACCATGTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETGAARP*SPCPSL
Trigger: CAGAGAAGGACATGGTGAGCATGGCCGTGCTGCCCC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCCGCTCTTCGCTGTaGCTGTTGGAGTTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETPRSSL*LLELCV
Trigger: GACGCACAACTCCAACAGGCACAGCGAAGAGCGGGG...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGAAGGCTCCGAGGTTTaGTTCACCTCGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVEGSEV*FTSKKA
Trigger: CGCCTTCTTCGAGGTGAAGCAAACCTCGGAGCCTTC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGCACTCAGGAGCTGCTaGACATATGAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVALRSC*TYEVSR
Trigger: CCTGCTGACCTCATATGTGCAGCAGCTCCTGAGTGC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCTCCAGGAAGCCTTCTaGTTGGTAGTACACCTCGCC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVLQEAF*LVVHLA
Trigger: GGCGAGGTGTACTACCAAGCAGAAGGCTTCCTGGAG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCATGGTTTCCTGCCTTTaGCTGGCGGATGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVMVSCL*LADGPM
Trigger: CATGGGACCATCCGCCAGGCAAAGGCAGGAAACCAT...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTACAGCTGCCCGCCTCTaGCTCAGGAACTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETTAARL*LRNSFL
Trigger: CAGGAAGGAGTTCCTGAGGCAGAGGCGGGCAGCTGT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCTCTTGGCCTGGACTTaGTGGCGCACCAGGTATCCC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETLLAWT*WRTRYP
Trigger: GGGATACCTGGTGCGCCAGCAAGTCCAGGCCAAGAG...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTGTGCAGATCTACTGTaGTGTGGAACCTGGGCACCG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVCADLL*CGTWAP
Trigger: CGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGTGTCCTGCAGGGCCATaGCGAAAATGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGCPAGP*RKWTSP
Trigger: AGGAGAGGTCCATTTTCGCCATGGCCCTGCAGGACA...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACTGTCCTGCAGGGCCATaGCGAAAATGGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDCPAGP*RKWTSP
Trigger: AGGAGAGGTCCATTTTCGCCATGGCCCTGCAGGACA...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCATGGCGACAAAGATCTaGCAGGCGATGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSMATKI*QAMSQR
Trigger: CCTCTGGGACATCGCCTGCCAGATCTTTGTCGCCAT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCGTGTCTATAAACTTCTaGGCATGGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVVSINF*AWGSSP
Trigger: GGGGCTGCTGCCCCATGCCCAGAAGTTTATAGACAC...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGTCCTCAGGACCTTCTaGATTCGGCGGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETVLRTF*IRRLQS
Trigger: CGACTGCAGCCGCCGAATCCAGAAGGTCCTGAGGAC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTCTCACTGGTGTCATTaGGGAAGTAGATCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVSHWCH*GSRSCG
Trigger: GCCACAAGATCTACTTCCCCAATGACACCAGTGAGA...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACATTCACATCCTTCCCTaGAGATATGTTGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: GLGRCRQARGREGRLSRHIHILP*RYVEPQ
Trigger: TTGTGGCTCAACATATCTCCAGGGAAGGATGTGAAT...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGTCAGGAAGGCCACCTTaGCCTCCTCCACTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGSGRPP*PPPLSC
Trigger: ACAAGACAGTGGAGGAGGCCAAGGTGGCCTTCCTGA...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCACATTTTTGGGGTCCTaGGCTGGTGGTGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPTFLGS*AGGVKM
Trigger: CATCTTCACACCACCAGCCCAGGACCCCAAAAATGT...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGCAGACTTGAAGAGATaGTTTCCTGCCTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPADLKR*FPAFAW
Trigger: CCAGGCAAAGGCAGGAAACCATCTCTTCAAGTCTGC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGGCTCTGTCTAGCACCTaGCTTCTCTGTACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGALSST*LLCTSS
Trigger: GCTGGAGGTACAGAGAAGCCAGGTGCTAGACAGAGC...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGATGTGTGTGTGGCTaGCTGATTTCTGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEGCVCG*LISGSK
Trigger: CTTACTTCCAGAAATCAGCCAGCCACACACACATCC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCGCCGGATGTGTGTGTaGCTGGCTGATTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDRRMCV*LADFWK
Trigger: CTTCCAGAAATCAGCCAGCCACACACACATCCGGCG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCCGGCCCTTGGCCGATaGAGTTCAGTAGATACTTCA +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSPALGR*SSVDTS
Trigger: TGAAGTATCTACTGAACTTCATCGGCCAAGGGCCGG...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTTGTGCTTCTTGGACTTaGCAGCCTGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETCASWT*QPAAPA
Trigger: GGCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACA...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGGCTGATGACCTTGTCTaGAATCTTGATGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVADDLV*NLDEEA
Trigger: AGCCTCTTCATCAAGATTTCAGACAAGGTCATCAGC...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTAGTAAATCTCATCCCTaGGGCTGGGCCGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETSKSHP*GWAAGW
Trigger: CCATCCTGCGGCCCAGCCTCAGGGATGAGATTTACT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTCTCCGAGAGCTGCTTaGAGATCTGGCAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPSPRAA*RSGSKS
Trigger: AGATTTACTGCCAGATCTGCAAGCAGCTCTCGGAGA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCAGCAGCATCTTCTCCTaGTGGTCCAGGAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSSIFS*WSRKQS
Trigger: GCTTTGCTTCCTGGACCAGCAGGAGAAGATGCTGCT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAGCAGCATCTTCTCCTaGTGGTCCAGGAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSSIFS*WSRKQS
Trigger: GCTTTGCTTCCTGGACCAGCAGGAGAAGATGCTGCT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCAACTCGTACTCCTCATaGATCGTGGAGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSNSYSS*IVESSS
Trigger: GCTGCTGCTCTCCACGATGCATGAGGAGTACGAGTT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAACTCGTACTCCTCATaGATCGTGGAGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGNSYSS*IVESSS
Trigger: GCTGCTGCTCTCCACGATGCATGAGGAGTACGAGTT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGATGGCACTCAGGAGCTaGTGCACATATGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGMALRS*CTYEVS
Trigger: GCTGACCTCATATGTGCAGCAGCTCCTGAGTGCCAT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGGATCCAGTGTTCCTTaGCCTCGTCATCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGGSSVP*PRHLQP
Trigger: TGGTTGAAGATGACGAGGGCAAGGAACACTGGATCC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTTTCTCCAGGAGAAATTaGTCGATGCGCGCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETFSRRN*SMRAPS
Trigger: CGAGGGCGCGCGCATCGAGCAATTTCTCCTGGAGAA...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCGGCAAAATGGGCAATaGCAAATCTGGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGRQNGQ*QIWHRG
Trigger: TCCACGATGCCAGATTTGGCATTGCCCATTTTGCCG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGTGGCCAAGATGACTTaGATGGGGATGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGVAKMT*MGMCFL
Trigger: CAAGAAGCACATCCCCATCCAAGTCATCTTGGCCAC...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGATGGCCACACTGCTaGGTGACACAAACTCGTACT +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVRWPHC*VTQTRT
Trigger: AGTACGAGTTTGTGTCACCCAGCAGTGTGGCCATCG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCAACCAAGACTTTGCCTaGCTTTGCCTCTTTGATGAT +
Preference number: 4 (lower is better)
Translates to: SETPDPILGPSFGLPGQRNQDFA*LCLFDD
Trigger: ATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGGAAGGCCTTGTTGTTaGCATGGACGCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSGRPCC*HGRCSA
Trigger: AGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCCAAATCTGGCATCGTaGATGTTCTTGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGPNLAS*MFLGCR
Trigger: CCTACAGCCCAAGAACATCCACGATGCCAGATTTGG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACACCTCGCCGGCAAAATaGGCAATGCCAAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDTSPAK*AMPNLA
Trigger: TGCCAGATTTGGCATTGCCCATTTTGCCGGCGAGGT...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGAGAGACTGTTTGAACTaGCTTCCTAAGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGRDCLN*LPKVEG
Trigger: GCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCT...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTCTCCAATGTTCAGCTaGCTGGCCACCTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSPMFS*LATCAD
Trigger: ATCTGCACAGGTGGCCAGCCAGCTGAACATTGGAGA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGAGGAGTAAACCAGGGTaGGGATATCTGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGRSKPG*GYLCSA
Trigger: TGCTGAGCACAGATATCCTCACCCTGGTTTACTCCT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCACTTGGATGGGGATGTaGTTCTTGGACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVTWMGM*FLDLTA
Trigger: GGCTGTCAAGTCCAAGAAGCACATCCCCATCCAAGT...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTGTGAGCGATGTGCATaGACATTTCCCGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVCERCA*TFPEMW
Trigger: CCACATCTCGGGAAATGTGCATGCACATCGCTCACA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGTGTGAGCGATGTGCATaGACATTTCCCGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGCERCA*TFPEMW
Trigger: CCACATCTCGGGAAATGTGCATGCACATCGCTCACA...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTAACTCCTCCAGGGTGTaGAGCTTTTCCTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETNSSRV*SFSLGG
Trigger: GCCACCCAAGGAAAAGCTGCACACCCTGGAGGAGTT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTATGGCGACAAAGATCTaGCAGGCGATGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETMATKI*QAMSQR
Trigger: CCTCTGGGACATCGCCTGCCAGATCTTTGTCGCCAT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTTCCCGCGAACACTTGTaGAATCCGCGCAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETSREHL*NPRRYL
Trigger: CAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGA...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGCCTTGTTGTTGGCATaGACGCTGTTCAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSALLLA*TLFSFC
Trigger: GCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCATCGTGGATGTTCTTaGGCTGTAGGAAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVHRGCS*AVGRPC
Trigger: ACAAGGCCTTCCTACAGCCCAAGAACATCCACGATG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGACCTCAAGCAGCTTCTaGGTCTTCGATTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGTSSSF*VFDSRS
Trigger: GGATCTGGAATCGAAGACCCAGAAGCTGCTTGAGGT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAAGTCACAGCAAACTTaGGGAAGGTGTACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGKSQQT*GRCTRP
Trigger: TGGCCGAGTACACCTTCCCCAAGTTTGCTGTGACTT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTCCAGGAGTTTTTATTaGACATTCTGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVSRSFY*TFWWGG
Trigger: CCCACCCCACCAGAATGTTCAATAAAAACTCCTGGA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCTTCCCAAAGCGGCTTaGGTTGTCGTTGCGGATTGT +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETLPKAA*VVVADC
Trigger: ACAATCCGCAACGACAACTCAAGCCGCTTTGGGAAG...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCTTGAGTCTGCAGACTTaGAGAGATGGTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSLSLQT*RDGFLP
Trigger: AGGCAGGAAACCATCTCTTCAAGTCTGCAGACTCAA...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGGTCCAGAGACTGTTTaGACTGGCTTCCTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETGPETV*TGFLRW
Trigger: CCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR GCA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTCTCCGAGAGCTGCTTaGAGATCTGGCAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVSPRAA*RSGSKS
Trigger: AGATTTACTGCCAGATCTGCAAGCAGCTCTCGGAGA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR GCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGATGGAGTATGGTGTCTaGATTCACATCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGMEYGV*IHILPW
Trigger: CCAGGGAAGGATGTGAATGCAGACACCATACTCCAT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTTCCTTGGTCTTGGGGTaGATGAGCAGAACCCCATGT +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETSLVLG*MSRTPC
Trigger: ACATGGGGTTCTGCTCATCCACCCCAAGACCAAGGA...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAGTAAGGCTGGCAGTTaGTCAGGATTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSKAGS*SGFSSA
Trigger: AGCTGATGAAAATCCTGACCAACTGCCAGCCTTACT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR TCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTTCAGTAGATACTTCATaGACCTCTCTGAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETSVDTS*TSLRVG
Trigger: TCCCACCCTCAGAGAGGTTCATGAAGTATCTACTGA...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR TCA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTGCTAACTCCAAGTTaGATATCTCCCTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGLLTPS*ISPSET
Trigger: AGTTTCTGAGGGAGATATTCAACTTGGAGTTAGCAG...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCAGGATTTTCATCAGCTaGTCCAGAGACTGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSRIFIS*SRDCLN
Trigger: GTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGGTGGTAATGGAGTATaGTGTCTGCATTCACATCCT +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETGGNGV*CLHSHP
Trigger: AGGATGTGAATGCAGACACCATACTCCATTACCACC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CCA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTATTCACATCCTTCCCTaGAGATATGTTGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETIHILP*RYVEPQ
Trigger: TTGTGGCTCAACATATCTCCAGGGAAGGATGTGAAT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS CCA 90 bp GGCGCAGGGGGTCCCGCCTGGCCTTGCCACCTTGGCTGCTGGTCCTaGGGATGCACCCAGGCCCTCTCCAGATCTGCTGGCCCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GAGGPAWPCHLGCWS*GCTQALSRSAGPAW
Trigger: CCAGGCGGGGCCAGCAGATCTGGAGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS TCA 90 bp GCCCTGGCCGTGCAGCCTGGTCCAGCATGGGTGCCCCTGGTAGGCTaGGGCCCCCACAGGCAGCACCTAGGGCCTCGCTCACTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: ALAVQPGPAWVPLVG*GPHRQHLGPRSLPV
Trigger: GACGGGCAGTGAGCGAGGCCCTAGGTGCTGCCTGTGGGGGCCTCAGCCTACCAGGGGCACCCATGCTGGACCAGGCTGCACGGCCAGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 90 bp GCCAAGGGCGCAGGGGGTCCCGCCTGGCCTTGCCACCTTGGCTGCTaGTCCTGGGGATGCACCCAGGCCCTCTCCAGATCTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: AKGAGGPAWPCHLGC*SWGCTQALSRSAGP
Trigger: GGGGCCAGCAGATCTGGAGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCCCTTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 90 bp CCCTCCTTGGAATGGGCCAAGGGCGCAGGGGGTCCCGCCTGGCCTTaGCACCTTGGCTGCTGGTCCTGGGGATGCACCCAGGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSLEWAKGAGGPAWP*HLGCWSWGCTQALS
Trigger: GGAGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCCCTTGGCCCATTCCAAGGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 90 bp CGCCAGGGTGACTGGCGCTGGCTCTCGCCCCTCTCCTGGGCCATCTaGTCACACCGGGCGATGGCATCCATCATGTGGTCGCGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RQGDWRWLSPLSWAI*SHRAMASIMWSRPL
Trigger: CAGCGGGCGCGACCACATGATGGATGCCATCGCCCGGTGTGAGCAGATGGCCCAGGAGAGGGGCGAGAGCCAGCGCCAGTCACCCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp CGCACCAGGTATCCCCTGCACAGGGCCTGCAGCTGGACTGTCCTCTaGCGCATGGCCTGGTACTGCCTCGCCAGCGGCTGGCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: RTRYPLHRACSWTVL*RMAWYCLASGWLRA
Trigger: TGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp GTCCAGTGGCCGCCTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTaGGTGGGCTATTGGCGTGTGGAGCTGGCTCTGCTCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: VQWPPTAWVLRWSRL*VGYWRVELALLQDP
Trigger: GGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGCGGCCACTGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 90 bp CCCCTGCACAGGGCCTGCAGCTGGACTGTCCTCTGCCGCATGGCCTaGTACTGCCTCGCCAGCGGCTGGCTCCGGGCAATAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLHRACSWTVLCRMA*YCLASGWLRAIACR
Trigger: CCTGCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp GGAATGGGCCAAGGGCGCAGGGGGTCCCGCCTGGCCTTGCCACCTTaGCTGCTGGTCCTGGGGATGCACCCAGGCCCTCTCCAGATCTGC +
Preference number: 5 (lower is better)
Translates to: GMGQGRRGSRLALPP*LLVLGMHPGPLQIC
Trigger: GCAGATCTGGAGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCCCTTGGCCCATTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS-3UTR CAA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACCAGCAGCCGCGCCCTTaGCACAGCCCATCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLGRCRQARGREGRLSRHQQPRP*HSPSAP
Trigger: GGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCTG...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409090.1
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCTTCTGGGCCCGTCTTTaGGCCTCCCTGGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPFWARL*ASLGSA
Trigger: GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAA...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS GCA 90 bp CACAGGGCCTGCAGCTGGACTGTCCTCTGCCGCATGGCCTGGTACTaGCTCGCCAGCGGCTGGCTCCGGGCAATAGCCTGCAGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: HRACSWTVLCRMAWY*LASGWLRAIACRRS
Trigger: TGAGCGCCTGCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp CCACTGCAGGCGGGCGGCGTCCACCACCTGCTCTCGCACGGCCAGTaGTGTGACTTGCTTCTGAGTGTATGGGGCCTTGGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: PLQAGGVHHLLSHGQ*CDLLLSVWGLGAGG
Trigger: GCCGCCTGCGCCAAGGCCCCATACACTCAGAAGCAAGTCACACCACTGGCCGTGCGAGAGCAGGTGGTGGACGCCGCCCGCCTGCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp AGTGGCCGCCTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTGCGTaGGCTATTGGCGTGTGGAGCTGGCTCTGCTCCAGGACCCCACCT +
Preference number: 5 (lower is better)
Translates to: SGRLRPGCCAGVGCA*AIGVWSWLCSRTPP
Trigger: AGGTGGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGCGGCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCAGCTCCTGGACAGCCTaGCTCTCTGCTGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGASSWTA*LSAEAP
Trigger: CGGCGCCTCAGCAGAGAGCAAGGCTGTCCAGGAGCT...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCAAGATCAGCTGCGTCTaGGGCAGGCGGGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPKISCV*GRRGPE
Trigger: CTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCTT...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGGCACCAGCCCCGTCTaGCCTGTCCTGTCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAGTSPV*PVLSFW
Trigger: CCAGAACGACAGGACAGGCAAGACGGGGCTGGTGCC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGGCACCAGCCCCGTCTaGCCTGTCCTGTCGTTCTGG +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSAGTSPV*PVLSFW
Trigger: CCAGAACGACAGGACAGGCAAGACGGGGCTGGTGCC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS CCA 90 bp TGGACTTGCTGGCGCACCAGGTATCCCCTGCACAGGGCCTGCAGCTaGACTGTCCTCTGCCGCATGGCCTGGTACTGCCTCGCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: WTCWRTRYPLHRACS*TVLCRMAWYCLASG
Trigger: GCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCGCCAGCAAGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp CTTCCGGGGACTGTCCTCCTGAGAACCTGCTGGGTTCTGGTCCAGTaGCCGCCTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LPGTVLLRTCWVLVQ*PPTAWVLRWSRLCV
Trigger: CACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGCGGCCACTGGACCAGAACCCAGCAGGTTCTCAGGAGGACAGTCCCCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS-3UTR CAA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCCCCAGGGACCAGAACTaGTCGTACACGGCGACCTGG +
Preference number: 5 (lower is better)
Translates to: GRCRQARGREGRLSRHASPRDQN*SYTATW
Trigger: CCAGGTCGCCGTGTACGACAAGTTCTGGTCCCTGGG...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTCCCAGAGGTCGACGTaGGCGTGGACTCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGASQRST*AWTRLS
Trigger: GCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTCCCAGAGGTCGACGTaGGCGTGGACTCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSASQRST*AWTRLS
Trigger: GCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGA...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCTCCCGCACCCGTGTGTaGGCAACCACCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSASRTRV*ATTSSI
Trigger: GATGCTGGAGGTGGTTGCCAACACACGGGTGCGGGA...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCGTCATCTGGCGGAGCTaGCCTTGCAGCTGCATCCGC +
Preference number: 5 (lower is better)
Translates to: GRCRQARGREGRLSRHASVIWRS*PCSCIR
Trigger: GCGGATGCAGCTGCAAGGCAAGCTCCGCCAGATGAC...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCGCATTGGCCTTCCTTaGCTGGAAGTTGCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPRIGLP*LEVAPG
Trigger: GCCCGGCGCAACTTCCAGCAAAGGAAGGCCAATGCG...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS TCA 90 bp GCTGGAAGTTGCGCCGGGCAGCCATGCCCCTGGCATGGGCCTGAATaGCCACCACTGCCCTCCTCTTGGCCTGGACTTGCTGGCGCACCA +
Preference number: 5 (lower is better)
Translates to: AGSCAGQPCPWHGPE*PPLPSSWPGLAGAP
Trigger: TGGTGCGCCAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGTGGTCATTCAGGCCCATGCCAGGGGCATGGCTGCCCGGCGCAACTTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp TCTGAGAGGTCCCATATGCAGGGCACCTCTCCAGCGCCGGGGCCCTaGCCAGCCTCCTCCTCTCTCAGGACAGTGCCACCAGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SERSHMQGTSPAPGP*PASSSLRTVPPGSA
Trigger: TGCAGAGCCTGGTGGCACTGTCCTGAGAGAGGAGGAGGCTGGGCAGGGCCCCGGCGCTGGAGAGGTGCCCTGCATATGGGACCTCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp ACAGCTTGTGGGGGATGCAGCTGGGCAGCAGCTCCTGGACAGCCTTaGTCTCTGCTGAGGCGCCGAGCTGCACGTAGCAGTGCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: TACGGCSWAAAPGQP*SLLRRRAARSSAGP
Trigger: TGGCCCGGCACTGCTACGTGCAGCTCGGCGCCTCAGCAGAGAGCAAGGCTGTCCAGGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp TTGGCCTGGACTTGCTGGCGCACCAGGTATCCCCTGCACAGGGCCTaGAGCTGGACTGTCCTCTGCCGCATGGCCTGGTACTGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LAWTCWRTRYPLHRA*SWTVLCRMAWYCLA
Trigger: GGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCGCCAGCAAGTCCAGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp CTGCCCTCCTCTTGGCCTGGACTTGCTGGCGCACCAGGTATCCCCTaGACAGGGCCTGCAGCTGGACTGTCCTCTGCCGCATGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LPSSWPGLAGAPGIP*TGPAAGLSSAAWPG
Trigger: ACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCGCCAGCAAGTCCAGGCCAAGAGGAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp GGGAAGGCGGGCTCCTGCCATTGGGGCCGTCATTTCTGCTTGCCCTaGTGGAGCTGGGTCTCCCTCCCTCCTTGGAATGGGCCAAGGGCG +
Preference number: 5 (lower is better)
Translates to: GKAGSCHWGRHFCLP*WSWVSLPPWNGPRA
Trigger: CGCCCTTGGCCCATTCCAAGGAGGGAGGGAGACCCAGCTCCAGCAGGGCAAGCAGAAATGACGGCCCCAATGGCAGGAGCCCGCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 90 bp GCCCTGGGGCATCCTTCATCACTCCAAGGTGCAGCCACCTGTTTCTaGCTGAGCTGGCCCTCACCGCCGGGCCCCAGGGCCTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: ALGHPSSLQGAATCF*LSWPSPPGPRAWLF
Trigger: GAACAACCAGGCCCTGGGGCCCGGCGGTGAGGGCCAGCTCAGGCAGAAACAGGTGGCTGCACCTTGGAGTGATGAAGGATGCCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp TGGACTGTCCTCTGCCGCATGGCCTGGTACTGCCTCGCCAGCGGCTaGCTCCGGGCAATAGCCTGCAGGCGCTCAAAGCCCACGAGGATC +
Preference number: 5 (lower is better)
Translates to: WTVLCRMAWYCLASG*LRAIACRRSKPTRI
Trigger: GATCCTCGTGGGCTTTGAGCGCCTGCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp TGCTGCGCTGGAGTCGGCTGTGCGTGGGCTATTGGCGTGTGGAGCTaGCTCTGCTCCAGGACCCCACCTACCTCTGTCCCAGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CCAGVGCAWAIGVWS*LCSRTPPTSVPAAL
Trigger: CAGGGCTGCTGGGACAGAGGTAGGTGGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 90 bp CCTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTGCGTGGGCTATTaGCGTGTGGAGCTGGCTCTGCTCCAGGACCCCACCTACCTCTGT +
Preference number: 5 (lower is better)
Translates to: PTAWVLRWSRLCVGY*RVELALLQDPTYLC
Trigger: ACAGAGGTAGGTGGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 90 bp AGGGAAGTTGGGTGGCTTCCGGGGACTGTCCTCCTGAGAACCTGCTaGGTTCTGGTCCAGTGGCCGCCTACGGCCTGGGTGCTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: REVGWLPGTVLLRTC*VLVQWPPTAWVLRW
Trigger: CCAGCGCAGCACCCAGGCCGTAGGCGGCCACTGGACCAGAACCCAGCAGGTTCTCAGGAGGACAGTCCCCGGAAGCCACCCAACTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS-3UTR CAA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAAGCTCCTGGACAGCCTaGCTCTCTGCTGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: QHGRLPAKDRPWVERAWESSWTA*LSAEAP
Trigger: CGGCGCCTCAGCAGAGAGCAAGGCTGTCCAGGAGCT...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCAACAGGTCCCCCTTCTaGAAGGCCAGGAGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGANRSPF*KARRVV
Trigger: CACCACCCTCCTGGCCTTCAAGAAGGGGGACCTGTT...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAATTGGCGTGGACTCGCTaGAGCAGCGGCTGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: QHGRLPAKDRPWVERAWELAWTR*SSGCRS
Trigger: GCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAA...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCTCCTCCCGCGAACACTaGTGGAATCCGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GRCRQARGREGRLSRHASSSREH*WNPRRY
Trigger: GTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGA...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCATGGCCACGCCGGTCTaGTGGGTGGAGGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPMATPV*WVEGGS
Trigger: GGAGCCTCCCTCCACCCACAAGACCGGCGTGGCCAT...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCCTGGCTTTGCCTCTTaGATGATGCCCCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPPGFAS*MMPPMA
Trigger: GGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGG...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTTGGTGGTCTCCGTCTaGCCAGCCCCAGACTCGCCG +
Preference number: 5 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVLVVSV*PAPDSP
Trigger: CGGCGAGTCTGGGGCTGGCAAGACGGAGACCACCAA...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCATGATGCTCATGGGCTaGAGGGCCAGCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPMMLMG*RASRSR
Trigger: CCTGGACCTGCTGGCCCTCAAGCCCATGAGCATCAT...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCCCCGCTTTCCAGTCTTaGTCTGTCCGCAGCCACACG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAPAFQS*SVRSHT
Trigger: CGTGTGGCTGCGGACAGACAAAGACTGGAAAGCGGG...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS TCA 90 bp TCTGGCAGGCGATGTCCCAGAGGTCGACGTTGGCGTGGACTCGCTTaGGCAGCGGCTGTCGCAGCGGCTCGCAGGAATAGGCCCACAGGT +
Preference number: 5 (lower is better)
Translates to: SGRRCPRGRRWRGLA*AAAVAAARRNRPTG
Trigger: ACCTGTGGGCCTATTCCTGCGAGCCGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGACATCGCCTGCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp TACAGGGAAGTTGGGTGGCTTCCGGGGACTGTCCTCCTGAGAACCTaGTGGGTTCTGGTCCAGTGGCCGCCTACGGCCTGGGTGCTGCGC +
Preference number: 5 (lower is better)
Translates to: YREVGWLPGTVLLRT*WVLVQWPPTAWVLR
Trigger: GCGCAGCACCCAGGCCGTAGGCGGCCACTGGACCAGAACCCAGCAGGTTCTCAGGAGGACAGTCCCCGGAAGCCACCCAACTTCCCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 90 bp CTGTGCTGTGGAACCTGGGCACCGTGCTCCCTGCCCAGCGTGTCATaGATCTGCCGCATCACTGAGCTGCCCTGCTGGCTGCTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LCCGTWAPCSLPSVS*ICRITELPCWLLLA
Trigger: TGCCAGGAGCAGCCAGCAGGGCAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp CACAACCCAGGGACACACGGGAACGAATGGATGGATGAATGGGCATaGGCCGCACAGAGGCCGCCAGTGCCCCCTCGACCCACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: HNPGTHGNEWMDEWA*AAQRPPVPPRPTQP
Trigger: TGGCTGGGTGGGTCGAGGGGGCACTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCCTGGGTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCAAGATCAGCTGCGTCTaGGGCAGGCGGGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPKISCV*GRRGPE
Trigger: CTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCTT...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCAACAGGTCCCCCTTCTaGAAGGCCAGGAGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRNRSPF*KARRVV
Trigger: CACCACCCTCCTGGCCTTCAAGAAGGGGGACCTGTT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGTGTGCAGCTTTTCCTaGGGTGGCTCCTCAGGACGT +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSAVCSFS*GGSSGR
Trigger: ACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACAC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCGGAAGGCTCCGAGGTTaGCTTCACCTCGAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPGRLRG*LHLEEG
Trigger: GCCTTCTTCGAGGTGAAGCAAACCTCGGAGCCTTCC...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCAGCAGGTCCTTGGTCTaGGGGTGGATGAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSASRSLV*GWMSRT
Trigger: GGTTCTGCTCATCCACCCCAAGACCAAGGACCTGCT...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTTCTGGGCCCGTCTTTaGGCCTCCCTGGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: VSHPPIAWGSETPDPILGFWARL*ASLGSA
Trigger: GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGGCCCTCCGCACATTTTaGGGGTCCTGGGCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVALRTF*GSWAGG
Trigger: ACCACCAGCCCAGGACCCCAAAAATGTGCGGAGGGC...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCGAGCGGTACTCCTCTaGCTCCATGGTGAACACGTG +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPRAVLL*LHGEHV
Trigger: CACGTGTTCACCATGGAGCAAGAGGAGTACCGCTCG...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCGTCCCATGGCCCAGCTaGGTCTCTGCTAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAVPWPS*VSANSK
Trigger: CTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGAC...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGTGCATCCGCATGGCGTaGGGCAGCAACACGCCGAAC +
Preference number: 5 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVCIRMA*GSNTPN
Trigger: GTTCGGCGTGTTGCTGCCCAACGCCATGCGGATGCA...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp TCGCCCACCTGTCTGGGGGCTTGGTCCTGTACAGCTTGTGGGGGATaGAGCTGGGCAGCAGCTCCTGGACAGCCTTGCTCTCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SPTCLGAWSCTACGG*SWAAAPGQPCSLLR
Trigger: CCTCAGCAGAGAGCAAGGCTGTCCAGGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp TGTGGAACCTGGGCACCGTGCTCCCTGCCCAGCGTGTCATGGATCTaGCGCATCACTGAGCTGCCCTGCTGGCTGCTCCTGGCATACAGC +
Preference number: 5 (lower is better)
Translates to: CGTWAPCSLPSVSWI*RITELPCWLLLAYS
Trigger: GCTGTATGCCAGGAGCAGCCAGCAGGGCAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp AGCAGGTTCTCCAGCCACAGCCCTGTCCTCAGCAGCCGCGCCCTTTaGACAGCCCATCTGCTCCCAGATGTGCGGGATCCCCAGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SRFSSHSPVLSSRAL*TAHLLPDVRDPQSH
Trigger: GTGAGACTGGGGATCCCGCACATCTGGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCTGAGGACAGGGCTGTGGCTGGAGAACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437387.5
ENST00000496841.5
CDS CCA 90 bp ACCTGTCTGGGGGCTTGGTCCTGTACAGCTTGTGGGGGATGCAGCTaGGCAGCAGCTCCTGGACAGCCTTGCTCTCTGCTGAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: TCLGAWSCTACGGCS*AAAPGQPCSLLRRR
Trigger: TCGGCGCCTCAGCAGAGAGCAAGGCTGTCCAGGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp ACGAGGCTCGCCCACCTGTCTGGGGGCTTGGTCCTGTACAGCTTGTaGGGGATGCAGCTGGGCAGCAGCTCCTGGACAGCCTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: TRLAHLSGGLVLYSL*GMQLGSSSWTALLS
Trigger: AGAGAGCAAGGCTGTCCAGGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGCCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp GGCTTTGCCTCTTTGATGATGCCCCCGATGGCCACGCCGGTCTTGTaGGTGGAGGGAGGCTCCAGCCACACGTGGTCACCCAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: GFASLMMPPMATPVL*VEGGSSHTWSPSLN
Trigger: GTTCAGGCTGGGTGACCACGTGTGGCTGGAGCCTCCCTCCACCCACAAGACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp TGTTCCCACAACCCAGGGACACACGGGAACGAATGGATGGATGAATaGGCATGGGCCGCACAGAGGCCGCCAGTGCCCCCTCGACCCACC +
Preference number: 5 (lower is better)
Translates to: CSHNPGTHGNEWMDE*AWAAQRPPVPPRPT
Trigger: GGTGGGTCGAGGGGGCACTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCCTGGGTTGTGGGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp GGCCTGGTTGTTCCCACAACCCAGGGACACACGGGAACGAATGGATaGATGAATGGGCATGGGCCGCACAGAGGCCGCCAGTGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: GLVVPTTQGHTGTNG*MNGHGPHRGRQCPL
Trigger: GAGGGGGCACTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCCTGGGTTGTGGGAACAACCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp CCAGGGCCTGGTTGTTCCCACAACCCAGGGACACACGGGAACGAATaGATGGATGAATGGGCATGGGCCGCACAGAGGCCGCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: PGPGCSHNPGTHGNE*MDEWAWAAQRPPVP
Trigger: GGGCACTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCCTGGGTTGTGGGAACAACCAGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp ACCTGTTTCTGCCTGAGCTGGCCCTCACCGCCGGGCCCCAGGGCCTaGTTGTTCCCACAACCCAGGGACACACGGGAACGAATGGATGGA +
Preference number: 5 (lower is better)
Translates to: TCFCLSWPSPPGPRA*LFPQPRDTRERMDG
Trigger: TCCATCCATTCGTTCCCGTGTGTCCCTGGGTTGTGGGAACAACCAGGCCCTGGGGCCCGGCGGTGAGGGCCAGCTCAGGCAGAAACAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp CATCCTTCATCACTCCAAGGTGCAGCCACCTGTTTCTGCCTGAGCTaGCCCTCACCGCCGGGCCCCAGGGCCTGGTTGTTCCCACAACCC +
Preference number: 5 (lower is better)
Translates to: HPSSLQGAATCFCLS*PSPPGPRAWLFPQP
Trigger: GGGTTGTGGGAACAACCAGGCCCTGGGGCCCGGCGGTGAGGGCCAGCTCAGGCAGAAACAGGTGGCTGCACCTTGGAGTGATGAAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS-3UTR CAA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGGCTGCTTGTTTaGAAGTTCTCCGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GLGRCRQARGREGRLSRHARLLV*KFSESC
Trigger: GCAGCTCTCGGAGAACTTCAAAACAAGCAGCCTGGC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCGACTCCTCGGAGGACTaGGCGGTAAATAAGCTCGGT +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSADSSED*AVNKLG
Trigger: ACCGAGCTTATTTACCGCCAAGTCCTCCGAGGAGTC...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGACTCCTCGGAGGACTaGGCGGTAAATAAGCTCGGT +
Preference number: 5 (lower is better)
Translates to: GLGRCRQARGREGRLSRHDSSED*AVNKLG
Trigger: ACCGAGCTTATTTACCGCCAAGTCCTCCGAGGAGTC...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGGCCAGTGGTGTGACTaGCTTCTGAGTGTATGGGGC +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRGQWCD*LLSVWG
Trigger: GCCCCATACACTCAGAAGCAAGTCACACCACTGGCC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCTCTTCGCTGTGCCTGTaGGAGTTGTGCGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRSSLCL*ELCVSC
Trigger: GCAGCTGACGCACAACTCCAACAGGCACAGCGAAGA...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCAGAACCCCATGTCGGTaGATGGCGATGAGGATGACG +
Preference number: 5 (lower is better)
Translates to: RDSRPHSGPVFWPPWAAPRTPCR*MAMRMT
Trigger: CGTCATCCTCATCGCCATCAACCGACATGGGGTTCT...GGGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAATTGGAGCCCCGCTGCTaGTTCATGGCACTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: QHGRLPAKDRPWVERAWELEPRC*FMALRS
Trigger: GCTCCTGAGTGCCATGAACAAGCAGCGGGGCTCCAA...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCTGGCGGAGCTTGCCTaGCAGCTGCATCCGCATGGC +
Preference number: 5 (lower is better)
Translates to: VSHPPIAWGSETPDPILGLAELA*QLHPHG
Trigger: GCCATGCGGATGCAGCTGCAAGGCAAGCTCCGCCAG...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCACCACTGCCCTCCTCTaGGCCTGGACTTGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VSHPPIAWGSETPDPILGTTALL*AWTCWR
Trigger: GCGCCAGCAAGTCCAGGCCAAGAGGAGGGCAGTGGT...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCATGACCAGCGGCGCATaGGCCTTCCTTTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRMTSGA*AFLCWK
Trigger: CTTCCAGCAAAGGAAGGCCAATGCGCCGCTGGTCAT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp GCCACAGCCCTGTCCTCAGCAGCCGCGCCCTTTGCACAGCCCATCTaGTCCCAGATGTGCGGGATCCCCAGTCTCACGGTGATTACAGTC +
Preference number: 5 (lower is better)
Translates to: ATALSSAAAPFAQPI*SQMCGIPSLTVITV
Trigger: GACTGTAATCACCGTGAGACTGGGGATCCCGCACATCTGGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCTGAGGACAGGGCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437387.5
CDS CCA 90 bp GATCCTCAAAGTGCGGCGAGGCCTGGCCCTCCTGGCCCCCAATCATaGCAGGGAGGAAGCCGAACACCTTCTCCACCATCTCCGTGTCAG +
Preference number: 5 (lower is better)
Translates to: DPQSAARPGPPGPQS*QGGSRTPSPPSPCQ
Trigger: CTGACACGGAGATGGTGGAGAAGGTGTTCGGCTTCCTCCCTGCCATGATTGGGGGCCAGGAGGGCCAGGCCTCGCCGCACTTTGAGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCCACCTGTCTGGGGGCTaGGTCCTGTACAGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPHLSGG*VLYSLW
Trigger: CCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTG...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGTGTGCAGCTTTTCCTaGGGTGGCTCCTCAGGACGT +
Preference number: 5 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEVCSFS*GGSSGR
Trigger: ACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACAC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTTGGCGTGGACTCGCTaGAGCAGCGGCTGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVLAWTR*SSGCRS
Trigger: GCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCTCCCGCACCCGTGTGTaGGCAACCACCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: VSHPPIAWGSETPDPILGSRTRV*ATTSSI
Trigger: GATGCTGGAGGTGGTTGCCAACACACGGGTGCGGGA...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCTCCTCCCGCGAACACTaGTGGAATCCGCGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPSSREH*WNPRRY
Trigger: GTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGA...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGCAGTTCCACAAGCCTaGTCAGGATGGGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPAVPQA*SGWGSG
Trigger: GCCAGACCCCCATCCTGACAAGGCTTGTGGAACTGC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACTGTAGGAAGGCCTTGTaGTTGGCATGGACGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GLGRCRQARGREGRLSRHCRKAL*LAWTLF
Trigger: GAACAGCGTCCATGCCAACAACAAGGCCTTCCTACA...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGCATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGCTGTAGGAAGGCCTaGTTGTTGGCATGGACGCTG +
Preference number: 5 (lower is better)
Translates to: QHGRLPAKDRPWVERAWEGCRKA*LLAWTL
Trigger: CAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCC...TTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCGCATCGTGGATGTTCTaGGGCTGTAGGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRASWMF*GCRKAL
Trigger: CAAGGCCTTCCTACAGCCCAAGAACATCCACGATGC...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCCCCCACGAGGATCAGCTaGAAATTCCTCCTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: PRLPTPFWARLLASLGSAPTRIS*KFLLLQ
Trigger: CTGCAACAGGAGGAATTTCAAGCTGATCCTCGTGGG...GGCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS TCA 90 bp GCGACCTGGAGGGAGAAGCCCAGGTGGTCGCTGAGGCCCTGCTTGTaGGCGATGTGCATGCACATTTCCCGAGATGTGGAGGCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: ATWREKPRWSLRPCL*AMCMHISRDVEAES
Trigger: GGACTCAGCCTCCACATCTCGGGAAATGTGCATGCACATCGCTCACAAGCAGGGCCTCAGCGACCACCTGGGCTTCTCCCTCCAGGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp ATGGCCTGGTACTGCCTCGCCAGCGGCTGGCTCCGGGCAATAGCCTaGAGGCGCTCAAAGCCCACGAGGATCAGCTTGAAATTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: MAWYCLASGWLRAIA*RRSKPTRISLKFLL
Trigger: CAGGAGGAATTTCAAGCTGATCCTCGTGGGCTTTGAGCGCCTGCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp CCTGTGCAGATCTACTGTGCTGTGGAACCTGGGCACCGTGCTCCCTaGCCAGCGTGTCATGGATCTGCCGCATCACTGAGCTGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PVQIYCAVEPGHRAP*PACHGSAASLSCPA
Trigger: AGCAGGGCAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp CTGGCCACCTGTGCAGATCTACTGTGCTGTGGAACCTGGGCACCGTaGTCCCTGCCCAGCGTGTCATGGATCTGCCGCATCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LATCADLLCCGTWAP*SLPSVSWICRITEL
Trigger: CAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp AGAAAGGGAAGGCGGGCTCCTGCCATTGGGGCCGTCATTTCTGCTTaGCCTGCTGGAGCTGGGTCTCCCTCCCTCCTTGGAATGGGCCAA +
Preference number: 5 (lower is better)
Translates to: RKGRRAPAIGAVISA*PAGAGSPSLLGMGQ
Trigger: TTGGCCCATTCCAAGGAGGGAGGGAGACCCAGCTCCAGCAGGGCAAGCAGAAATGACGGCCCCAATGGCAGGAGCCCGCCTTCCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 90 bp ATGGAGAAAGGGAAGGCGGGCTCCTGCCATTGGGGCCGTCATTTCTaGTTGCCCTGCTGGAGCTGGGTCTCCCTCCCTCCTTGGAATGGG +
Preference number: 5 (lower is better)
Translates to: MEKGKAGSCHWGRHF*LPCWSWVSLPPWNG
Trigger: CCCATTCCAAGGAGGGAGGGAGACCCAGCTCCAGCAGGGCAAGCAGAAATGACGGCCCCAATGGCAGGAGCCCGCCTTCCCTTTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS CCA 90 bp TTCAGCTGGCTGGCCACCTGTGCAGATCTACTGTGCTGTGGAACCTaGGCACCGTGCTCCCTGCCCAGCGTGTCATGGATCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: FSWLATCADLLCCGT*APCSLPSVSWICRI
Trigger: GATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGGTGGCCAGCCAGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp ATGGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGATGTGCTTCTTGGACTaGACAGCCTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: MEGCPPRTGPGLRGPGKVMCFLD*TACSSS
Trigger: GCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACAT...CACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCAGGGACCAGAACTaGTCGTACACGGCGACCTGG +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDPRDQN*SYTATW
Trigger: CCAGGTCGCCGTGTACGACAAGTTCTGGTCCCTGGG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGGCCAGTGGTGTGACTaGCTTCTGAGTGTATGGGGC +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPGQWCD*LLSVWG
Trigger: GCCCCATACACTCAGAAGCAAGTCACACCACTGGCC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCTTCTCCAGGAGAAATaGCTCGATGCGCGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGLLQEK*LDARAL
Trigger: GAGGGCGCGCGCATCGAGCAATTTCTCCTGGAGAAG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACGCCAGCGACGCTGTTCAGCTTTaGCAGCATGGTGAGATCTGT +
Preference number: 5 (lower is better)
Translates to: GRCRQARGREGRLSRHASDAVQL*QHGEIC
Trigger: ACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTC...GCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCATGGGGAAGCCCGACTaGCGGATGTGCACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVMGKPD*RMCTVS
Trigger: GGAGACCGTGCACATCCGCAAGTCGGGCTTCCCCAT...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTTCCTTTGCTGGAAGTaGCGCCGGGCAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVFLCWK*RRAAMP
Trigger: GGGCATGGCTGCCCGGCGCAACTTCCAGCAAAGGAA...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTGGCAGGGAGAGCGCCTaGGCTTTTCTGCCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETGRESA*AFLPLG
Trigger: GCCGAGGGGCAGAAAAGCCAAGGCGCTCTCCCTGCC...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS TCA 90 bp TCTCCAGCAGCTCTGTCCTATGCATCTTGGATGGGAGAAAGAACCTaGGCTCACCAGGGAGGTCTCGCACAGCAGGCGGCTGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SPAALSYASWMGERT*AHQGGLAQQAAATA
Trigger: GGCCGTGGCAGCCGCCTGCTGTGCGAGACCTCCCTGGTGAGCTCAGGTTCTTTCTCCCATCCAAGATGCATAGGACAGAGCTGCTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 90 bp TCTGTGCAGATCTACTGTGCTGTGGAACCTGGGCACCGTGCTCCCTaGCCAGCGTGTCATGGATCTGCCGCATCACTGAGCTGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: SVQIYCAVEPGHRAP*PACHGSAASLSCPA
Trigger: AGCAGGGCAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS GCA 90 bp CAGGTTGGACATGGGCCGGTCTGCACCAAGGCCATCAGGCTCCAATaGCTCCTCTCCAATGTTCAGCTGGCTGGCCACCTGGCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: QVGHGPVCTKAIRLQ*LLSNVQLAGHLACD
Trigger: ATCACAGGCCAGGTGGCCAGCCAGCTGAACATTGGAGAGGAGGCATTGGAGCCTGATGGCCTTGGTGCAGACCGGCCCATGTCCAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS CCA 90 bp CTACTCGATTCCTCTCCCATGGCCTGTGCTCTCGGTCCTTTAGGGTaGGGCTCGGCTTCAGGAAGCAGCAGGTTCTCCAGCCACAGCCCT +
Preference number: 5 (lower is better)
Translates to: LLDSSPMACALGPLG*GSASGSSRFSSHSP
Trigger: AGGGCTGTGGCTGGAGAACCTGCTGCTTCCTGAAGCCGAGCCCCACCCTAAAGGACCGAGAGCACAGGCCATGGGAGAGGAATCGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp GGCCCTCCAGGAACAGGGCCACCAGCTCAGCGATGGCCACACTGCTaGGTGACACAAACTCGTACTCCTCATGCATCGTGGAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GPPGTGPPAQRWPHC*VTQTRTPHASWRAA
Trigger: TGCTGCTCTCCACGATGCATGAGGAGTACGAGTTTGTGTCACCCAGCAGTGTGGCCATCGCTGAGCTGGTGGCCCTGTTCCTGGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp TGTACTCGGCCAGGCCATCCACATCCTCCTCAGGCTCCTCCGCCATaGGGACTGTGTCCAGGTCAACCTCAAGCAGCTTCTGGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: CTRPGHPHPPQAPPP*GLCPGQPQAASGSS
Trigger: CGAAGACCCAGAAGCTGCTTGAGGTTGACCTGGACACAGTCCCCATGGCGGAGGAGCCTGAGGAGGATGTGGATGGCCTGGCCGAGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp ATCCTCGATTCCTCTCCCATGGCCTGTGCTCTCGGTCCTTTAGGGTaGGGCTCGGCTTCAGGAAGCAGCAGGTTCTCCAGCCACAGCCCT +
Preference number: 5 (lower is better)
Translates to: ILDSSPMACALGPLG*GSASGSSRFSSHSP
Trigger: AGGGCTGTGGCTGGAGAACCTGCTGCTTCCTGAAGCCGAGCCCCACCCTAAAGGACCGAGAGCACAGGCCATGGGAGAGGAATCGAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437387.5
CDS CCA 90 bp GTGCCAGTGCAGTCACTGTCCCCAAACATTGCTGCCCTCTGCTCCTaGTTCCAGAGCCCTCAGGGGCTTGGTCTGCCTACCACATGGGCT +
Preference number: 5 (lower is better)
Translates to: VPVQSLSPNIAALCS*FQSPQGLGLPTTWA
Trigger: AGCCCATGTGGTAGGCAGACCAAGCCCCTGAGGGCTCTGGAACCAGGAGCAGAGGGCAGCAATGTTTGGGGACAGTGACTGCACTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS-3UTR CAA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCACCTGTCTGGGGGCTaGGTCCTGTACAGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSHLSGG*VLYSLW
Trigger: CCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTG...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTTCCCTGGAGATATGTaGAGCCACAATTTCCGCATG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAFPGDM*SHNFRM
Trigger: CATGCGGAAATTGTGGCTCAACATATCTCCAGGGAA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACGTGGTGAGCAGGTCCTaGGTCTTGGGGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDVVSRS*VLGWMS
Trigger: GCTCATCCACCCCAAGACCAAGGACCTGCTCACCAC...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACTCTTCAACCAAGACTTaGCCTGGCTTTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GLGRCRQARGREGRLSRHSSTKT*PGFASL
Trigger: CAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGA...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACATGGCAGCCAGCAGCTaGATGACGTCCCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDMAASS*MTSQLS
Trigger: CGAGAGCTGGGACGTCATCAAGCTGCTGGCTGCCAT...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCAGGAAGCCTTCTGCTaGGTAGTACACCTCGCCGGC +
Preference number: 5 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVQEAFC*VVHLAG
Trigger: GCCGGCGAGGTGTACTACCAAGCAGAAGGCTTCCTG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCGATGGTTTCCTGCCTTaGCCTGGCGGATGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VSHPPIAWGSETPDPILGDGFLP*PGGWSH
Trigger: ATGGGACCATCCGCCAGGCAAAGGCAGGAAACCATC...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGCCTGGGAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTGAGCAGACACTTTGAGTCTGCAGACTaGAAGAGATGGTTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: GLGRCRQARGREGRLSRHFESAD*KRWFPA
Trigger: GGCAGGAAACCATCTCTTCAAGTCTGCAGACTCAAA...GTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS TCA 90 bp ACTTGTCGTACACGGCGACCTGGAGGGAGAAGCCCAGGTGGTCGCTaGGGCCCTGCTTGTGAGCGATGTGCATGCACATTTCCCGAGATG +
Preference number: 5 (lower is better)
Translates to: TCRTRRPGGRSPGGR*GPACERCACTFPEM
Trigger: CATCTCGGGAAATGTGCATGCACATCGCTCACAAGCAGGGCCTCAGCGACCACCTGGGCTTCTCCCTCCAGGTCGCCGTGTACGACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS TCA 90 bp GGATCTTCATGGCCGAGCGGATGTGGGCGTAGTCCTTGGCGTCGTTaGGCCCCTCACAGGAAGTGCAGTTCCCCATGGTCAGGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: GSSWPSGCGRSPWRR*APHRKCSSPWSGSG
Trigger: ACCACTACCTGACCATGGGGAACTGCACTTCCTGTGAGGGGCTCAACGACGCCAAGGACTACGCCCACATCCGCTCGGCCATGAAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 90 bp TCTTCCCCGCTTTCCAGTCTTTGTCTGTCCGCAGCCACACGTCAGTaGTGCCCAGGGTCATCTGGCGGAGCTTGCCTTGCAGCTGCATCC +
Preference number: 5 (lower is better)
Translates to: SSPLSSLCLSAATRQ*CPGSSGGACLAAAS
Trigger: GGATGCAGCTGCAAGGCAAGCTCCGCCAGATGACCCTGGGCATCACTGACGTGTGGCTGCGGACAGACAAAGACTGGAAAGCGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 90 bp TGGCAGGGAGGAAGCCGAACACCTTCTCCACCATCTCCGTGTCAGTaGCGGTGTCGTAGATGGATCTGCGCTTCTTGGCAGGGAGAGCGC +
Preference number: 5 (lower is better)
Translates to: WQGGSRTPSPPSPCQ*RCRRWICASWQGER
Trigger: GCGCTCTCCCTGCCAAGAAGCGCAGATCCATCTACGACACCGTCACTGACACGGAGATGGTGGAGAAGGTGTTCGGCTTCCTCCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp TCTGAAATCTTGATGAAGAGGCTGCAGCCCTCCCAGGAGGCCAGCTaGAGCCTGGTGGCAATGCTGTCACACACATCCCGCACCCGTGTG +
Preference number: 5 (lower is better)
Translates to: SEILMKRLQPSQEAS*SLVAMLSHTSRTRV
Trigger: CACACGGGTGCGGGATGTGTGTGACAGCATTGCCACCAGGCTGCAGCTGGCCTCCTGGGAGGGCTGCAGCCTCTTCATCAAGATTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 90 bp CCAGATCTCTGTGCAGATCTACTGTGCTGTGGAACCTGGGCACCGTaGTCCCTGCCCAGCGTGTCATGGATCTGCCGCATCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PDLCADLLCCGTWAP*SLPSVSWICRITEL
Trigger: CAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGAGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS GCA 90 bp CAGGTTGGACATGGGCCGGTCTGCACCAAGGCCATCAGGCTCCAATaGCTCCTCTCCAATGTTCAGCTGGCTGGCCACCTGTGCAGATCT +
Preference number: 5 (lower is better)
Translates to: QVGHGPVCTKAIRLQ*LLSNVQLAGHLCRS
Trigger: AGATCTGCACAGGTGGCCAGCCAGCTGAACATTGGAGAGGAGGCATTGGAGCCTGATGGCCTTGGTGCAGACCGGCCCATGTCCAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp AGGACCCTCTGTCCCACCCTCTCCAAGTCATGCTGCAGGTGCCAGTaGAGTCACTGTCCCCAAACATTGCTGCCCTCTGCTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RTLCPTLSKSCCRCQ*SHCPQTLLPSAPGS
Trigger: GGAACCAGGAGCAGAGGGCAGCAATGTTTGGGGACAGTGACTGCACTGGCACCTGCAGCATGACTTGGAGAGGGTGGGACAGAGGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp ACCTCTCCTTCAGGCCCTCCAGGAACAGGGCCACCAGCTCAGCGATaGCCACACTGCTGGGTGACACAAACTCGTACTCCTCATGCATCG +
Preference number: 5 (lower is better)
Translates to: TSPSGPPGTGPPAQR*PHCWVTQTRTPHAS
Trigger: CGATGCATGAGGAGTACGAGTTTGTGTCACCCAGCAGTGTGGCCATCGCTGAGCTGGTGGCCCTGTTCCTGGAGGGCCTGAAGGAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp GAACTCATAGGAGAACTCCTCCAGGGTGTGCAGCTTTTCCTTGGGTaGCTCCTCAGGACGTGGCTCTGTGAACTGCCCCTCCTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ELIGELLQGVQLFLG*LLRTWLCELPLLSR
Trigger: GCGGCTCAGGAGGGGCAGTTCACAGAGCCACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACACCCTGGAGGAGTTCTCCTATGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp TCCTTGCAGCCAGATCTCTGTGCAGATCTACTGTGCTGTGGAACCTaGGCACCGTGCTCCCTGCCCAGCGTGTCATGGATCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: SLQPDLCADLLCCGT*APCSLPSVSWICRI
Trigger: GATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGAGATCTGGCTGCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS CCA 90 bp GCCACGCCCTCCCCCAGCTCCACAGAGGCCTCCTCACCTTCTTTCTaGGGCTTGTTCTTCTTCACCCAGTCAGACACCTCCCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: ATPSPSSTEASSPSF*GLFFFTQSDTSLKE
Trigger: TTCCTTGAGGGAGGTGTCTGACTGGGTGAAGAAGAACAAGCCCCAGAAAGAAGGTGAGGAGGCCTCTGTGGAGCTGGGGGAGGGCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS-3UTR CAA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGTCTTCGCTGTGCCTGTaGGAGTTGTGCGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSSLCL*ELCVSC
Trigger: GCAGCTGACGCACAACTCCAACAGGCACAGCGAAGA...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCTTCCCTGGAGATATGTaGAGCCACAATTTCCGCATG +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRFPGDM*SHNFRM
Trigger: CATGCGGAAATTGTGGCTCAACATATCTCCAGGGAA...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCAGTTCCCTCAGGATCTaGGGGACACTAGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSSSLRI*GTLASW
Trigger: CCAGCTGGCTAGTGTCCCCAAGATCCTGAGGGAACT...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACAGTTCCCTCAGGATCTaGGGGACACTAGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDSSLRI*GTLASW
Trigger: CCAGCTGGCTAGTGTCCCCAAGATCCTGAGGGAACT...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGGAAGGCTCCGAGGTTaGCTTCACCTCGAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGGRLRG*LHLEEG
Trigger: GCCTTCTTCGAGGTGAAGCAAACCTCGGAGCCTTCC...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGAGCAGGTCCTTGGTCTaGGGGTGGATGAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGSRSLV*GWMSRT
Trigger: GGTTCTGCTCATCCACCCCAAGACCAAGGACCTGCT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCCCAAAGCGGCTTGAGTaGTCGTTGCGGATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPPKRLE*SLRIVL
Trigger: CAAGACAATCCGCAACGACAACTCAAGCCGCTTTGG...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS CCA 90 bp GAGTCCACGGGGACGGTTAGGCTCTCTCCAGTGGCCAAGATGACTTaGATGGGGATGTGCTTCTTGGACTTGACAGCCTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ESTGTVRLSPVAKMT*MGMCFLDLTACSSS
Trigger: GCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACATCCCCATCCAAGTCATCTTGGCCACTGGAGAGAGCCTAACCGTCCCCGTGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACGCCAGGCTGCTTGTTTaGAAGTTCTCCGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDARLLV*KFSESC
Trigger: GCAGCTCTCGGAGAACTTCAAAACAAGCAGCCTGGC...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACATGTGCTTCTTGGACTaGACAGCCTGCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDMCFLD*TACSSS
Trigger: GCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACAT...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGAAGGCTGCCCGCCAAGGACAGGCCCTGGGTTGAGAGGGCCTGGGAAGGTGCCTTCTGGCTGATGACCTaGTCTGAAATCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: GRLPAKDRPWVERAWEGAFWLMT*SEILMK
Trigger: CTTCATCAAGATTTCAGACAAGGTCATCAGCCAGAA...GGCACCTTCCCAGGCCCTCTCAACCCAGGGCCTGTCCTTGGCGGGCAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TGGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGAGAACCCCATGTCGGTaGATGGCGATGAGGATGACG +
Preference number: 5 (lower is better)
Translates to: WGGVGRCPVSQSSTNSLGRTPCR*MAMRMT
Trigger: CGTCATCCTCATCGCCATCAACCGACATGGGGTTCT...CCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp AGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGATGAGGATGGTGTGCTaGATCAGACAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: SQSSTNSLGVRDSRPHSGMRMVC*IRQSRS
Trigger: GCTCCGGGACTGTCTGATCAAGCACACCATCCTCAT...CCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTATGGATCTGCGCTTCTaGGCAGGGAGAGCGCCTTGG +
Preference number: 5 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETMDLRF*AGRAPW
Trigger: CCAAGGCGCTCTCCCTGCCAAGAAGCGCAGATCCAT...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp TGGTCCAGGAAGCAAAGCCCCTTCCAGTTAACAGCCAAGATCAGCTaGGTCTTGGGCAGGCGGGGGCCTGAGAGTGTGATGACTTCGAAG +
Preference number: 5 (lower is better)
Translates to: WSRKQSPFQLTAKIS*VLGRRGPESVMTSK
Trigger: CTTCGAAGTCATCACACTCTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCTTGGCTGTTAACTGGAAGGGGCTTTGCTTCCTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS-3UTR CAA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGAGTGGCCAAGATGACTaGGATGGGGATGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGSGQDD*DGDVLL
Trigger: AAGAAGCACATCCCCATCCAAGTCATCTTGGCCACT...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCAGCACTGGTCCCTCTaGTTCCTCTTCATGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GGVGRCPVSQSSTNSLGVQHWSL*FLFMLK
Trigger: CTTCAGCATGAAGAGGAACAAGAGGGACCAGTGCTG...GACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp CAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCCCGTGAAGATGGCGGCATaGATCTTCTTGACAATCCAC +
Preference number: 5 (lower is better)
Translates to: QSSTNSLGVRDSRPHSGPVKMAA*IFLTIH
Trigger: GTGGATTGTCAAGAAGATCAATGCCGCCATCTTCAC...GGGCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTGGTCCAGAGACTGTTaGAACTGGCTTCCTAAGGTG +
Preference number: 5 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGWSRDC*NWLPKV
Trigger: CACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS TCA 90 bp GGAACTCCTTCCTGTATCTGTAGCCCCGAAGGACTTTCTGGATGCTaGGCGCCGCTCTGTCTAGCACCTGGCTTCTCTGTACCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: GTPSCICSPEGLSGC*APLCLAPGFSVPPA
Trigger: TGCTGGAGGTACAGAGAAGCCAGGTGCTAGACAGAGCGGCGCTCAGCATCCAGAAAGTCCTTCGGGGCTACAGATACAGGAAGGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp GTGTTCCTTGCCCTCGTCATCTTCAACCAAGACTTTGCCTGGCTTTaGCTCTTTGATGATGCCCCCGATGGCCACGCCGGTCTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: VFLALVIFNQDFAWL*LFDDAPDGHAGLVG
Trigger: ACCCACAAGACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGATGACGAGGGCAAGGAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp ATGTTCAGGGACCTGGTGACAAATTCCCCTCGGATGAGGATGGTGTaGTTGATCAGACAGTCCCGGAGCTCCTGGTGCTGCACCTCCAGT +
Preference number: 5 (lower is better)
Translates to: MFRDLVTNSPRMRMV*LIRQSRSSWCCTSS
Trigger: ACTGGAGGTGCAGCACCAGGAGCTCCGGGACTGTCTGATCAAGCACACCATCCTCATCCGAGGGGAATTTGTCACCAGGTCCCTGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp GGCTGTAGGAAGGCCTTGTTGTTGGCATGGACGCTGTTCAGCTTTTaGAGCATGGTGAGATCTGTCCCCTGCGGGAAGCGGCTTTCTTCG +
Preference number: 5 (lower is better)
Translates to: GCRKALLLAWTLFSF*SMVRSVPCGKRLSS
Trigger: CGAAGAAAGCCGCTTCCCGCAGGGGACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp AGATCTGGCAGTAAATCTCATCCTCGATTCCTCTCCCATGGCCTGTaGTCTCGGTCCTTTAGGGTGGGGCTCGGCTTCAGGAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RSGSKSHPRFLSHGL*SRSFRVGLGFRKQQ
Trigger: CTGCTGCTTCCTGAAGCCGAGCCCCACCCTAAAGGACCGAGAGCACAGGCCATGGGAGAGGAATCGAGGATGAGATTTACTGCCAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437387.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACAGTGGCCAAGATGACTaGGATGGGGATGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDSGQDD*DGDVLL
Trigger: AAGAAGCACATCCCCATCCAAGTCATCTTGGCCACT...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGCTCCAGGAGTTTTTATaGAACATTCTGGTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGLQEFL*NILVGW
Trigger: CCACCCCACCAGAATGTTCAATAAAAACTCCTGGAG...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp TTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCGGATCCAGTGTTCCTaGCCCTCGTCATCTTCAACC +
Preference number: 5 (lower is better)
Translates to: LGGVLSVSHPPIAWGSETRIQCS*PSSSST
Trigger: GGTTGAAGATGACGAGGGCAAGGAACACTGGATCCG...AGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCGCGGCATTGATCTTCTaGACAATCCACAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GRCPVSQSSTNSLGVRDSAALIF*TIHRKR
Trigger: CCTCTTCCTGTGGATTGTCAAGAAGATCAATGCCGC...GGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS-3UTR CAA 90 bp TCCGAGACTCCCGACCCCATTCTGGGCCCGTCTTTTGGCCTCCCTGGGCAGCGCAGCTGCTCGAAGCTATaGTTCTCGAAATTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SETPDPILGPSFGLPGQRSCSKL*FSKFSK
Trigger: CTTTGAAAATTTCGAGAACAATAGCTTCGAGCAGCT...GCGCTGCCCAGGGAGGCCAAAAGACGGGCCCAGAATGGGGTCGGGAGTCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS CCA 90 bp GATCCAGTGTTCCTTGCCCTCGTCATCTTCAACCAAGACTTTGCCTaGCTTTGCCTCTTTGATGATGCCCCCGATGGCCACGCCGGTCTT +
Preference number: 5 (lower is better)
Translates to: DPVFLALVIFNQDFA*LCLFDDAPDGHAGL
Trigger: AAGACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGATGACGAGGGCAAGGAACACTGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp GGTAAAGCAACGGGTATCGGAGGGGCCGCCGGATGTGTGTGTGGCTaGCTGATTTCTGGAAGTAAGTCACAGCAAACTTGGGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: GKATGIGGAAGCVCG*LISGSKSQQTWGRC
Trigger: ACACCTTCCCCAAGTTTGCTGTGACTTACTTCCAGAAATCAGCCAGCCACACACACATCCGGCGGCCCCTCCGATACCCGTTGCTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp CTCAAGGAATCAAAGAAGAAGTCTCCCTCCTTCTGGCTGATGACCTaGGGAAGGGGAAGGTACAGGGAAGTTGGGTGGCTTCCGGGGACT +
Preference number: 5 (lower is better)
Translates to: LKESKKKSPSFWLMT*GRGRYREVGWLPGT
Trigger: AGTCCCCGGAAGCCACCCAACTTCCCTGTACCTTCCCCTTCCCCAGGTCATCAGCCAGAAGGAGGGAGACTTCTTCTTTGATTCCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS-3UTR CAA 90 bp GGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCTCCAGGAGTTTTTATaGAACATTCTGGTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GVLSVSHPPIAWGSETPDLQEFL*NILVGW
Trigger: CCACCCCACCAGAATGTTCAATAAAAACTCCTGGAG...GTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GTCAGTCATCCACCAATAGCCTGGGGGTCCGAGACTCCCGACCCCATTCTGGGCAACAGCAGCGGCTTCTaGTACTCATTAGGTTTGATG +
Preference number: 5 (lower is better)
Translates to: VSHPPIAWGSETPDPILGNSSGF*YSLGLM
Trigger: CATCAAACCTAATGAGTACAAGAAGCCGCTGCTGTT...GCCCAGAATGGGGTCGGGAGTCTCGGACCCCCAGGCTATTGGTGGATGACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp GGAAGCCTTCTGCTTGGTAGTACACCTCGCCGGCAAAATGGGCAATaGCAAATCTGGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GSLLLGSTPRRQNGQ*QIWHRGCSWAVGRP
Trigger: AGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCGAGGTGTACTACCAAGCAGAAGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 90 bp CCAGGGCAGCCTGCCCGGTACCTGGTGGTAATGGAGTATGGTGTCTaGATTCACATCCTTCCCTGGAGATATGTTGAGCCACAATTTCCG +
Preference number: 5 (lower is better)
Translates to: PGQPARYLVVMEYGV*IHILPWRYVEPQFP
Trigger: CGGAAATTGTGGCTCAACATATCTCCAGGGAAGGATGTGAATGCAGACACCATACTCCATTACCACCAGGTACCGGGCAGGCTGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 90 bp GCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTTGTTGTTGGCATaGACGCTGTTCAGCTTTTGCAGCATGGTGAGATCTGTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: ASWMFLGCRKALLLA*TLFSFCSMVRSVPC
Trigger: GCAGGGGACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp CGCCGGCAAAATGGGCAATGCCAAATCTGGCATCGTGGATGTTCTTaGGCTGTAGGAAGGCCTTGTTGTTGGCATGGACGCTGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: RRQNGQCQIWHRGCS*AVGRPCCWHGRCSA
Trigger: AGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp TGTGTGTGTGGCTGGCTGATTTCTGGAAGTAAGTCACAGCAAACTTaGGGAAGGTGTACTCGGCCAGGCCATCCACATCCTCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: CVCGWLISGSKSQQT*GRCTRPGHPHPPQA
Trigger: AGCCTGAGGAGGATGTGGATGGCCTGGCCGAGTACACCTTCCCCAAGTTTGCTGTGACTTACTTCCAGAAATCAGCCAGCCACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTTCTGGCTGATGACCTaGTCTGAAATCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGFWLMT*SEILMK
Trigger: CTTCATCAAGATTTCAGACAAGGTCATCAGCCAGAA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409090.1
ENST00000428314.5
CDS-3UTR CAA 90 bp GGGGTGGGGTTGGGAGGTGTCCTGTCAGTCAGTCATCCACCAATAGCCTGGGGGTCTGCTAACTCCAAGTaGAATATCTCCCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: GVGLGGVLSVSHPPIAWGSANSK*NISLRN
Trigger: GTTTCTGAGGGAGATATTCAACTTGGAGTTAGCAGA...CCCCCAGGCTATTGGTGGATGACTGACTGACAGGACACCTCCCAACCCCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS GCA 90 bp AGACCCATGACCTCTGGGAAAGAGAGTTCCAGCAGCATCTTCTCCTaGTGGTCCAGGAAGCAAAGCCCCTTCCAGTTAACAGCCAAGATC +
Preference number: 5 (lower is better)
Translates to: RPMTSGKESSSSIFS*WSRKQSPFQLTAKI
Trigger: GATCTTGGCTGTTAACTGGAAGGGGCTTTGCTTCCTGGACCAGCAGGAGAAGATGCTGCTGGAACTCTCTTTCCCAGAGGTCATGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 90 bp CTGCTTGGTAGTACACCTCGCCGGCAAAATGGGCAATGCCAAATCTaGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: LLGSTPRRQNGQCQI*HRGCSWAVGRPCCW
Trigger: CCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCGAGGTGTACTACCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp GACTTGAAGAGATGGTTTCCTGCCTTTGCCTGGCGGATGGTCCCATaGCCCAGCTTGGTCTCTGCTAACTCCAAGTTGAATATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: DLKRWFPAFAWRMVP*PSLVSANSKLNISL
Trigger: GAGGGAGATATTCAACTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCAGGCAAAGGCAGGAAACCATCTCTTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp TTATTTGAGTCTGCAGACTTGAAGAGATGGTTTCCTGCCTTTGCCTaGCGGATGGTCCCATGGCCCAGCTTGGTCTCTGCTAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: LFESADLKRWFPAFA*RMVPWPSLVSANSK
Trigger: CTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCAGGCAAAGGCAGGAAACCATCTCTTCAAGTCTGCAGACTCAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 90 bp GGCGGATGGTCCCATGGCCCAGCTTGGTCTCTGCTAACTCCAAGTTaGATATCTCCCTCAGAAACTTGTTTTTGGAGGAGTAAACCAGGG +
Preference number: 5 (lower is better)
Translates to: GGWSHGPAWSLLTPS*ISPSETCFWRSKPG
Trigger: CCCTGGTTTACTCCTCCAAAAACAAGTTTCTGAGGGAGATATTCAACTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGACCATCCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 90 bp GCTGGCAGTTGGTCAGGATTTTCATCAGCTGGTCCAGAGACTGTTTaGACTGGCTTCCTAAGGTGGAGGGCCGTTTATTTGAGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGSWSGFSSAGPETV*TGFLRWRAVYLSLQ
Trigger: CTGCAGACTCAAATAAACGGCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCTGACCAACTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 90 bp CAGTTGGTCAGGATTTTCATCAGCTGGTCCAGAGACTGTTTGAACTaGCTTCCTAAGGTGGAGGGCCGTTTATTTGAGTCTGCAGACTTG +
Preference number: 5 (lower is better)
Translates to: QLVRIFISWSRDCLN*LPKVEGRLFESADL
Trigger: CAAGTCTGCAGACTCAAATAAACGGCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCTGACCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp CCAAGGGCGCAGGGGGTCCCGCCTGGCCTTGCCACCTaGGCTGCTGGTCCTGGGGATGCACCCAGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PRAQGVPPGLAT*AAGPGDAPRPS
Trigger: AGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCCCTTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 72 bp GAATGGGCCAAGGGCGCAGGGGGTCCCGCCTGGCCTTaGCACCTTGGCTGCTGGTCCTGGGGATGCACCCAG +
Preference number: 6 (lower is better)
Translates to: EWAKGAGGPAWP*HLGCWSWGCTQ
Trigger: CTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCCCTTGGCCCATTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS CCA 72 bp TGCACAGGGCCTGCAGCTGGACTGTCCTCTGCCGCATaGCCTGGTACTGCCTCGCCAGCGGCTGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: CTGPAAGLSSAA*PGTASPAAGSG
Trigger: CCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp TGGAATGGGCCAAGGGCGCAGGGGGTCCCGCCTGGCCTTGCCACCTaGGCTGCTGGTCCTGGGGATGCACCCAGGCCCTCTCCAGATCTG +
Preference number: 6 (lower is better)
Translates to: WNGPRAQGVPPGLAT*AAGPGDAPRPSPDL
Trigger: CAGATCTGGAGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACCCCCTGCGCCCTTGGCCCATTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 72 bp CCGCCTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTaGGTGGGCTATTGGCGTGTGGAGCTGGCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: PPTAWVLRWSRL*VGYWRVELALL
Trigger: GAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS GCA 72 bp GGGTTCTGGTCCAGTGGCCGCCTACGGCCTGGGTGCTaGGCTGGAGTCGGCTGTGCGTGGGCTATTGGCGTG +
Preference number: 6 (lower is better)
Translates to: GFWSSGRLRPGC*AGVGCAWAIGV
Trigger: CACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGCGGCCACTGGACCAGAACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS GCA 72 bp CTGGTCCTGGGGATGCACCCAGGCCCTCTCCAGATCTaGTGGCCCCGCCTGGGCCCTGTGACTGAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: LVLGMHPGPLQI*WPRLGPVTEPS
Trigger: AGAGGGCTCAGTCACAGGGCCCAGGCGGGGCCAGCAGATCTGGAGAGGGCCTGGGTGCATCCCCAGGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS CCA 72 bp CTCTGCCGCATGGCCTGGTACTGCCTCGCCAGCGGCTaGCTCCGGGCAATAGCCTGCAGGCGCTCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: LCRMAWYCLASG*LRAIACRRSKP
Trigger: GGGCTTTGAGCGCCTGCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp CTGGTCCAGTGGCCGCCTACGGCCTGGGTGCTGCGCTaGAGTCGGCTGTGCGTGGGCTATTGGCGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: LVQWPPTAWVLR*SRLCVGYWRVE
Trigger: CTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGCGGCCACTGGACCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 72 bp GGTCCCGCCTGGCCTTGCCACCTTGGCTGCTGGTCCTaGGGATGCACCCAGGCCCTCTCCAGATCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: GPAWPCHLGCWS*GCTQALSRSAG
Trigger: GCCAGCAGATCTGGAGAGGGCCTGGGTGCATCCCCAGGACCAGCAGCCAAGGTGGCAAGGCCAGGCGGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS CAA 72 bp CTCGGCCGGGATGACCAGCGGCGCATTGGCCTTCCTTaGCTGGAAGTTGCGCCGGGCAGCCATGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: LGRDDQRRIGLP*LEVAPGSHAPG
Trigger: GCCAGGGGCATGGCTGCCCGGCGCAACTTCCAGCAAAGGAAGGCCAATGCGCCGCTGGTCATCCCGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp TTGGCGCAGGCGGCAGTGACGAGGCTCGCCCACCTGTCTGGGGGCTaGGTCCTGTACAGCTTGTGGGGGATGCAGCTGGGCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LAQAAVTRLAHLSGG*VLYSLWGMQLGSSS
Trigger: GGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGCCTCGTCACTGCCGCCTGCGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 90 bp GCCTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTGCGTGGGCTATaGGCGTGTGGAGCTGGCTCTGCTCCAGGACCCCACCTACCTCTG +
Preference number: 6 (lower is better)
Translates to: AYGLGAALESAVRGL*ACGAGSAPGPHLPL
Trigger: CAGAGGTAGGTGGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS TCA 72 bp GCTTCTGAGTGTATGGGGCCTTGGCGCAGGCGGCAGTaGCGAGGCTCGCCCACCTGTCTGGGGGCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: ASECMGPWRRRQ*RGSPTCLGAWS
Trigger: GGACCAAGCCCCCAGACAGGTGGGCGAGCCTCGTCACTGCCGCCTGCGCCAAGGCCCCATACACTCAGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS TCA 72 bp GAAGGTGCCGCCAGGCTAGAGGTCGGGAAGGGCGCCTaGGCAGACACGCCAGCATCCGCTGCTAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EGAARLEVGKGA*ADTPASAARCW
Trigger: CCAGCACCTAGCAGCGGATGCTGGCGTGTCTGCTCAGGCGCCCTTCCCGACCTCTAGCCTGGCGGCACCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS GCA 72 bp TGCAGCTGGACTGTCCTCTGCCGCATGGCCTGGTACTaGCTCGCCAGCGGCTGGCTCCGGGCAATAGCCTGC +
Preference number: 6 (lower is better)
Translates to: CSWTVLCRMAWY*LASGWLRAIAC
Trigger: GCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp TATCCCCTGCACAGGGCCTGCAGCTGGACTGTCCTCTaGCGCATGGCCTGGTACTGCCTCGCCAGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: YPLHRACSWTVL*RMAWYCLASGW
Trigger: CCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp TCGGCCGGGATGACCAGCGGCGCATTGGCCTTCCTTTaGTGGAAGTTGCGCCGGGCAGCCATGCCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: SAGMTSGALAFL*WKLRRAAMPLA
Trigger: TGCCAGGGGCATGGCTGCCCGGCGCAACTTCCAGCAAAGGAAGGCCAATGCGCCGCTGGTCATCCCGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp CTGCGCTTCTTGGCAGGGAGAGCGCCTTGGCTTTTCTaGCCCTCGGCCGGGATGACCAGCGGCGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: LRFLAGRAPWLF*PSAGMTSGALA
Trigger: GGCCAATGCGCCGCTGGTCATCCCGGCCGAGGGGCAGAAAAGCCAAGGCGCTCTCCCTGCCAAGAAGCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp GGCGCAGGCGGCAGTGACGAGGCTCGCCCACCTGTCTaGGGGCTTGGTCCTGTACAGCTTGTGGGGGATGCA +
Preference number: 6 (lower is better)
Translates to: GAGGSDEARPPV*GLGPVQLVGDA
Trigger: TGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGCCTCGTCACTGCCGCCTGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp AGGGCCTGCAGCTGGACTGTCCTCTGCCGCATGGCCTaGTACTGCCTCGCCAGCGGCTGGCTCCGGGCAATA +
Preference number: 6 (lower is better)
Translates to: RACSWTVLCRMA*YCLASGWLRAI
Trigger: TATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp GCCGGGATGACCAGCGGCGCATTGGCCTTCCTTTGCTaGAAGTTGCGCCGGGCAGCCATGCCCCTGGCATGG +
Preference number: 6 (lower is better)
Translates to: AGMTSGALAFLC*KLRRAAMPLAW
Trigger: CCATGCCAGGGGCATGGCTGCCCGGCGCAACTTCCAGCAAAGGAAGGCCAATGCGCCGCTGGTCATCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp TGGGTGCTGCGCTGGAGTCGGCTGTGCGTGGGCTATTaGCGTGTGGAGCTGGCTCTGCTCCAGGACCCCACC +
Preference number: 6 (lower is better)
Translates to: WVLRWSRLCVGY*RVELALLQDPT
Trigger: GGTGGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 72 bp CTACGGCCTGGGTGCTGCGCTGGAGTCGGCTGTGCGTaGGCTATTGGCGTGTGGAGCTGGCTCTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LRPGCCAGVGCA*AIGVWSWLCSR
Trigger: CCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAGGCCGTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 72 bp GGGTGGCTTCCGGGGACTGTCCTCCTGAGAACCTGCTaGGTTCTGGTCCAGTGGCCGCCTACGGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: GWLPGTVLLRTC*VLVQWPPTAWV
Trigger: CACCCAGGCCGTAGGCGGCCACTGGACCAGAACCCAGCAGGTTCTCAGGAGGACAGTCCCCGGAAGCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CAA 72 bp GCGGCAGTGACGAGGCTCGCCCACCTGTCTGGGGGCTaGGTCCTGTACAGCTTGTGGGGGATGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: AAVTRLAHLSGG*VLYSLWGMQLG
Trigger: GCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGCCTCGTCACTGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 72 bp CTGGGTGCTGCGCTGGAGTCGGCTGTGCGTGGGCTATaGGCGTGTGGAGCTGGCTCTGCTCCAGGACCCCAC +
Preference number: 6 (lower is better)
Translates to: LGAALESAVRGL*ACGAGSAPGPH
Trigger: GTGGGGTCCTGGAGCAGAGCCAGCTCCACACGCCAATAGCCCACGCACAGCCGACTCCAGCGCAGCACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS TCA 72 bp GCCAGGGGAATGACCCTGAGTCAGGGCAGGGCCCCCTaGCATCTGCGTGGAGGTGATGGCCTGCTCCACCCA +
Preference number: 6 (lower is better)
Translates to: ARGMTLSQGRAP*HLRGGDGLLHP
Trigger: TGGGTGGAGCAGGCCATCACCTCCACGCAGATGTCAGGGGGCCCTGCCCTGACTCAGGGTCATTCCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS GCA 72 bp GACTGGCGCTGGCTCTCGCCCCTCTCCTGGGCCATCTaGTCACACCGGGCGATGGCATCCATCATGTGGTCG +
Preference number: 6 (lower is better)
Translates to: DWRWLSPLSWAI*SHRAMASIMWS
Trigger: CGACCACATGATGGATGCCATCGCCCGGTGTGAGCAGATGGCCCAGGAGAGGGGCGAGAGCCAGCGCCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp TGGGCACCGTGCTCCCTGCCCAGCGTGTCATGGATCTaGCGCATCACTGAGCTGCCCTGCTGGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: WAPCSLPSVSWI*RITELPCWLLL
Trigger: CAGGAGCAGCCAGCAGGGCAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp TCCAGCCACAGCCCTGTCCTCAGCAGCCGCGCCCTTTaGACAGCCCATCTGCTCCCAGATGTGCGGGATCCC +
Preference number: 6 (lower is better)
Translates to: SSHSPVLSSRAL*TAHLLPDVRDP
Trigger: GGGATCCCGCACATCTGGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCTGAGGACAGGGCTGTGGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437387.5
ENST00000496841.5
CDS GCA 72 bp GTTGGGTGGCTTCCGGGGACTGTCCTCCTGAGAACCTaGTGGGTTCTGGTCCAGTGGCCGCCTACGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VGWLPGTVLLRT*WVLVQWPPTAW
Trigger: CCAGGCCGTAGGCGGCCACTGGACCAGAACCCAGCAGGTTCTCAGGAGGACAGTCCCCGGAAGCCACCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS GCA 72 bp GGAGGTGATGGCCTGCTCCACCCATGTGGTTGGCCCTaGAGGCCACGGCCACTGCTCCATGGGTCACAGGAC +
Preference number: 6 (lower is better)
Translates to: GGDGLLHPCGWP*RPRPLLHGSQD
Trigger: GTCCTGTGACCCATGGAGCAGTGGCCGTGGCCTGCAGGGCCAACCACATGGGTGGAGCAGGCCATCACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 72 bp CTGCCCAGGGACCAGAACTTGTCGTACACGGCGACCTaGAGGGAGAAGCCCAGGTGGTCGCTGAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LPRDQNLSYTAT*REKPRWSLRPC
Trigger: GCAGGGCCTCAGCGACCACCTGGGCTTCTCCCTCCAGGTCGCCGTGTACGACAAGTTCTGGTCCCTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp GCCCACCTGTCTGGGGGCTTGGTCCTGTACAGCTTGTaGGGGATGCAGCTGGGCAGCAGCTCCTGGACAGCC +
Preference number: 6 (lower is better)
Translates to: AHLSGGLVLYSL*GMQLGSSSWTA
Trigger: GGCTGTCCAGGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp GCGGGCGGCGTCCACCACCTGCTCTCGCACGGCCAGTaGTGTGACTTGCTTCTGAGTGTATGGGGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: AGGVHHLLSHGQ*CDLLLSVWGLG
Trigger: GCCAAGGCCCCATACACTCAGAAGCAAGTCACACCACTGGCCGTGCGAGAGCAGGTGGTGGACGCCGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp ATGGGCACCAGCCCCGTCTTGCCTGTCCTGTCGTTCTaGCCGAGGGTCCAGTTCTCAGAGGCCAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: MGTSPVLPVLSF*PRVQFSEASSP
Trigger: GGGGCTGCTGGCCTCTGAGAACTGGACCCTCGGCCAGAACGACAGGACAGGCAAGACGGGGCTGGTGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp ATCTGGCAGGCGATGTCCCAGAGGTCGACGTTGGCGTaGACTCGCTTGAGCAGCGGCTGTCGCAGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: IWQAMSQRSTLA*TRLSSGCRSGS
Trigger: CGAGCCGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGACATCGCCTGCCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp TGGCGCACCAGGTATCCCCTGCACAGGGCCTGCAGCTaGACTGTCCTCTGCCGCATGGCCTGGTACTGCCTC +
Preference number: 6 (lower is better)
Translates to: WRTRYPLHRACS*TVLCRMAWYCL
Trigger: GAGGCAGTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp GGGACACACGGGAACGAATGGATGGATGAATGGGCATaGGCCGCACAGAGGCCGCCAGTGCCCCCTCGACCC +
Preference number: 6 (lower is better)
Translates to: GTHGNEWMDEWA*AAQRPPVPPRP
Trigger: GGGTCGAGGGGGCACTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 72 bp CCTGGCCTGCTGGCTTCTACAGCCTCAGAACAGGTGTaGGAAGATGGGGGTGGCCCCAGTGCCCACCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGLLASTASEQV*EDGGGPSAHQG
Trigger: GCCCTGGTGGGCACTGGGGCCACCCCCATCTTCCCACACCTGTTCTGAGGCTGTAGAAGCCAGCAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CAA 90 bp GTGACGAGGCTCGCCCACCTGTCTGGGGGCTTGGTCCTGTACAGCTaGTGGGGGATGCAGCTGGGCAGCAGCTCCTGGACAGCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: VTRLAHLSGGLVLYS*WGMQLGSSSWTALL
Trigger: GAGCAAGGCTGTCCAGGAGCTGCTGCCCAGCTGCATCCCCCACAAGCTGTACAGGACCAAGCCCCCAGACAGGTGGGCGAGCCTCGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 90 bp CCTGGCTTTGCCTCTTTGATGATGCCCCCGATGGCCACGCCGGTCTaGTGGGTGGAGGGAGGCTCCAGCCACACGTGGTCACCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: PGFASLMMPPMATPV*WVEGGSSHTWSPSL
Trigger: CAGGCTGGGTGACCACGTGTGGCTGGAGCCTCCCTCCACCCACAAGACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp CGGCGTCCACCACCTGCTCTCGCACGGCCAGTGGTGTaGCTTGCTTCTGAGTGTATGGGGCCTTGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RRPPPALARPVV*LASECMGPWRR
Trigger: CCTGCGCCAAGGCCCCATACACTCAGAAGCAAGTCACACCACTGGCCGTGCGAGAGCAGGTGGTGGACGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS TCA 72 bp CGATGTCCCAGAGGTCGACGTTGGCGTGGACTCGCTTaGGCAGCGGCTGTCGCAGCGGCTCGCAGGAATAGG +
Preference number: 6 (lower is better)
Translates to: RCPRGRRWRGLA*AAAVAAARRNR
Trigger: CCTATTCCTGCGAGCCGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGACATCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp ACCGGGCGATGGCATCCATCATGTGGTCGCGCCCGCTaGCCAGGGACCAGAACTTGTCGTACACGGCGACCT +
Preference number: 6 (lower is better)
Translates to: TGRWHPSCGRAR*PGTRTCRTRRP
Trigger: AGGTCGCCGTGTACGACAAGTTCTGGTCCCTGGGCAGCGGGCGCGACCACATGATGGATGCCATCGCCCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp ACTTGCTGGCGCACCAGGTATCCCCTGCACAGGGCCTaGAGCTGGACTGTCCTCTGCCGCATGGCCTGGTAC +
Preference number: 6 (lower is better)
Translates to: TCWRTRYPLHRA*SWTVLCRMAWY
Trigger: GTACCAGGCCATGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCGCCAGCAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp TCTTGGCCTGGACTTGCTGGCGCACCAGGTATCCCCTaGACAGGGCCTGCAGCTGGACTGTCCTCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: SWPGLAGAPGIP*TGPAAGLSSAA
Trigger: TGCGGCAGAGGACAGTCCAGCTGCAGGCCCTGTGCAGGGGATACCTGGTGCGCCAGCAAGTCCAGGCCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp CTGTCCTCAGCAGCCGCGCCCTTTGCACAGCCCATCTaGTCCCAGATGTGCGGGATCCCCAGTCTCACGGTG +
Preference number: 6 (lower is better)
Translates to: LSSAAAPFAQPI*SQMCGIPSLTV
Trigger: CACCGTGAGACTGGGGATCCCGCACATCTGGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCTGAGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437387.5
ENST00000496841.5
CDS GCA 72 bp AGGCGGGCTCCTGCCATTGGGGCCGTCATTTCTGCTTaGCCTGCTGGAGCTGGGTCTCCCTCCCTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: RRAPAIGAVISA*PAGAGSPSLLG
Trigger: TCCAAGGAGGGAGGGAGACCCAGCTCCAGCAGGGCAAGCAGAAATGACGGCCCCAATGGCAGGAGCCCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS CCA 72 bp CCCGCCAGGTGGATGGCATCCTCCCGCGAACACTTGTaGAATCCGCGCAGGTACTTGGGCAGCTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PARWMASSREHL*NPRRYLGSSWW
Trigger: CCACCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGATGCCATCCACCTGGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
CDS CCA 72 bp GTCCGCAGCCACACGTCAGTGATGCCCAGGGTCATCTaGCGGAGCTTGCCTTGCAGCTGCATCCGCATGGCG +
Preference number: 6 (lower is better)
Translates to: VRSHTSVMPRVI*RSLPCSCIRMA
Trigger: CGCCATGCGGATGCAGCTGCAAGGCAAGCTCCGCCAGATGACCCTGGGCATCACTGACGTGTGGCTGCGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp AGTGCGGCGAGGCCTGGCCCTCCTGGCCCCCAATCATaGCAGGGAGGAAGCCGAACACCTTCTCCACCATCT +
Preference number: 6 (lower is better)
Translates to: SAARPGPPGPQS*QGGSRTPSPPS
Trigger: AGATGGTGGAGAAGGTGTTCGGCTTCCTCCCTGCCATGATTGGGGGCCAGGAGGGCCAGGCCTCGCCGCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp CCCGCCAGGTGGATGGCATCCTCCCGCGAACACTTGTaGAATCCGCGCAGGTACTTGGGCAGCTCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PARWMASSREHL*NPRRYLGSSWV
Trigger: CACCCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGATGCCATCCACCTGGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CAA 72 bp GTCCACCACCTGCTCTCGCACGGCCAGTGGTGTGACTaGCTTCTGAGTGTATGGGGCCTTGGCGCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: VHHLLSHGQWCD*LLSVWGLGAGG
Trigger: GCCGCCTGCGCCAAGGCCCCATACACTCAGAAGCAAGTCACACCACTGGCCGTGCGAGAGCAGGTGGTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 72 bp AGGCCCGCCAGGTGGATGGCATCCTCCCGCGAACACTaGTGGAATCCGCGCAGGTACTTGGGCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: RPARWMASSREH*WNPRRYLGSSW
Trigger: CCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGATGCCATCCACCTGGCGGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CAA 72 bp GCCTCTTTGATGATGCCCCCGATGGCCACGCCGGTCTaGTGGGTGGAGGGAGGCTCCAGCCACACGTGGTCA +
Preference number: 6 (lower is better)
Translates to: ASLMMPPMATPV*WVEGGSSHTWS
Trigger: TGACCACGTGTGGCTGGAGCCTCCCTCCACCCACAAGACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp AGGATGGCGACAAAGATCTGGCAGGCGATGTCCCAGAGGTCGACGTaGGCGTGGACTCGCTTGAGCAGCGGCTGTCGCAGCGGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: RMATKIWQAMSQRST*AWTRLSSGCRSGSQ
Trigger: CTGCGAGCCGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGACATCGCCTGCCAGATCTTTGTCGCCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 90 bp GACGGTGTCGTAGATGGATCTGCGCTTCTTGGCAGGGAGAGCGCCTaGGCTTTTCTGCCCCTCGGCCGGGATGACCAGCGGCGCATTGGC +
Preference number: 6 (lower is better)
Translates to: DGVVDGSALLGRESA*AFLPLGRDDQRRIG
Trigger: GCCAATGCGCCGCTGGTCATCCCGGCCGAGGGGCAGAAAAGCCAAGGCGCTCTCCCTGCCAAGAAGCGCAGATCCATCTACGACACCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp CAGCAGGTTCTCCAGCCACAGCCCTGTCCTCAGCAGCCGCGCCCTTaGCACAGCCCATCTGCTCCCAGATGTGCGGGATCCCCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: QQVLQPQPCPQQPRP*HSPSAPRCAGSPVS
Trigger: TGAGACTGGGGATCCCGCACATCTGGGAGCAGATGGGCTGTGCAAAGGGCGCGGCTGCTGAGGACAGGGCTGTGGCTGGAGAACCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437387.5
ENST00000496841.5
CDS TCA 72 bp ACCTGCTCTCGCACGGCCAGTGGTGTGACTTGCTTCTaGGTGTATGGGGCCTTGGCGCAGGCGGCAGTGACG +
Preference number: 6 (lower is better)
Translates to: TCSRTASGVTCF*VYGALAQAAVT
Trigger: CGTCACTGCCGCCTGCGCCAAGGCCCCATACACTCAGAAGCAAGTCACACCACTGGCCGTGCGAGAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS TCA 72 bp GGAGAGCGCCTTGGCTTTTCTGCCCCTCGGCCGGGATaGCCAGCGGCGCATTGGCCTTCCTTTGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: GERLGFSAPRPG*PAAHWPSFAGS
Trigger: ACTTCCAGCAAAGGAAGGCCAATGCGCCGCTGGTCATCCCGGCCGAGGGGCAGAAAAGCCAAGGCGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp CTCCCTGCCCAGCGTGTCATGGATCTGCCGCATCACTaGGCTGCCCTGCTGGCTGCTCCTGGCATACAGCAC +
Preference number: 6 (lower is better)
Translates to: LPAQRVMDLPHH*AALLAAPGIQH
Trigger: GTGCTGTATGCCAGGAGCAGCCAGCAGGGCAGCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp GGCTCCTGCCATTGGGGCCGTCATTTCTGCTTGCCCTaGTGGAGCTGGGTCTCCCTCCCTCCTTGGAATGGG +
Preference number: 6 (lower is better)
Translates to: GSCHWGRHFCLP*WSWVSLPPWNG
Trigger: CCCATTCCAAGGAGGGAGGGAGACCCAGCTCCAGCAGGGCAAGCAGAAATGACGGCCCCAATGGCAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491278.5
CDS GCA 72 bp AAGATGGGGGTGGCCCCAGTGCCCACCAGGGCAGCCTaGCCGGTACCTGGTGGTAATGGAGTATGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: KMGVAPVPTRAA*PVPGGNGVWCL
Trigger: CAGACACCATACTCCATTACCACCAGGTACCGGGCAGGCTGCCCTGGTGGGCACTGGGGCCACCCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 72 bp GGCGGAGCTTGCCTTGCAGCTGCATCCGCATGGCGTTaGGCAGCAACACGCCGAACCTCTGCGAGAACTCCT +
Preference number: 6 (lower is better)
Translates to: GGACLAAASAWR*AATRRTSARTP
Trigger: AGGAGTTCTCGCAGAGGTTCGGCGTGTTGCTGCCCAACGCCATGCGGATGCAGCTGCAAGGCAAGCTCCGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp AACCCAGGGACACACGGGAACGAATGGATGGATGAATaGGCATGGGCCGCACAGAGGCCGCCAGTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: NPGTHGNEWMDE*AWAAQRPPVPP
Trigger: AGGGGGCACTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 72 bp GCCCCCAACCTCTTTCCCGCTCAGATGGTGGGGAACTaGGGCTTAGCCCACTCCATCCAGGACGGACTGAGC +
Preference number: 6 (lower is better)
Translates to: APNLFPAQMVGN*GLAHSIQDGLS
Trigger: GCTCAGTCCGTCCTGGATGGAGTGGGCTAAGCCCCAGTTCCCCACCATCTGAGCGGGAAAGAGGTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CAA 72 bp GTGCTGGCCAGGGCTGGGGCCTTGGAGCCCCGCTGCTaGTTCATGGCACTCAGGAGCTGCTGCACATATGAG +
Preference number: 6 (lower is better)
Translates to: VLARAGALEPRC*FMALRSCCTYE
Trigger: CTCATATGTGCAGCAGCTCCTGAGTGCCATGAACAAGCAGCGGGGCTCCAAGGCCCCAGCCCTGGCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CAA 72 bp TGGCGGAGCTTGCCTTGCAGCTGCATCCGCATGGCGTaGGGCAGCAACACGCCGAACCTCTGCGAGAACTCC +
Preference number: 6 (lower is better)
Translates to: WRSLPCSCIRMA*GSNTPNLCENS
Trigger: GGAGTTCTCGCAGAGGTTCGGCGTGTTGCTGCCCAACGCCATGCGGATGCAGCTGCAAGGCAAGCTCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp GGTGAAGAATTCCTTCCGGAAGTAGATGCGCCAGGGTaGCTGGCGCTGGCTCTCGCCCCTCTCCTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: GEEFLPEVDAPG*LALALAPLLGH
Trigger: ATGGCCCAGGAGAGGGGCGAGAGCCAGCGCCAGTCACCCTGGCGCATCTACTTCCGGAAGGAATTCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS TCA 72 bp TGGCCGAGCGGATGTGGGCGTAGTCCTTGGCGTCGTTaGGCCCCTCACAGGAAGTGCAGTTCCCCATGGTCA +
Preference number: 6 (lower is better)
Translates to: WPSGCGRSPWRR*APHRKCSSPWS
Trigger: TGACCATGGGGAACTGCACTTCCTGTGAGGGGCTCAACGACGCCAAGGACTACGCCCACATCCGCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp TACTGCCTCGCCAGCGGCTGGCTCCGGGCAATAGCCTaGAGGCGCTCAAAGCCCACGAGGATCAGCTTGAAA +
Preference number: 6 (lower is better)
Translates to: YCLASGWLRAIA*RRSKPTRISLK
Trigger: TTTCAAGCTGATCCTCGTGGGCTTTGAGCGCCTGCAGGCTATTGCCCGGAGCCAGCCGCTGGCGAGGCAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp CATGGGCCGGTCTGCACCAAGGCCATCAGGCTCCAATaGCTCCTCTCCAATGTTCAGCTGGCTGGCCACCTG +
Preference number: 6 (lower is better)
Translates to: HGPVCTKAIRLQ*LLSNVQLAGHL
Trigger: CAGGTGGCCAGCCAGCTGAACATTGGAGAGGAGGCATTGGAGCCTGATGGCCTTGGTGCAGACCGGCCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp TCCTCTCCCATGGCCTGTGCTCTCGGTCCTTTAGGGTaGGGCTCGGCTTCAGGAAGCAGCAGGTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSPMACALGPLG*GSASGSSRFSS
Trigger: GCTGGAGAACCTGCTGCTTCCTGAAGCCGAGCCCCACCCTAAAGGACCGAGAGCACAGGCCATGGGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409090.1
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp GGTGTGCAGCTTTTCCTTGGGTGGCTCCTCAGGACGTaGCTCTGTGAACTGCCCCTCCTGAGCCGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GVQLFLGWLLRT*LCELPLLSRQL
Trigger: AAGCTGGCGGCTCAGGAGGGGCAGTTCACAGAGCCACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp CCCAGCTCTCGGAGTCGGAGAACTGGAGGATCTTCATaGCCGAGCGGATGTGGGCGTAGTCCTTGGCGTCGT +
Preference number: 6 (lower is better)
Translates to: PSSRSRRTGGSS*PSGCGRSPWRR
Trigger: ACGACGCCAAGGACTACGCCCACATCCGCTCGGCCATGAAGATCCTCCAGTTCTCCGACTCCGAGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp CTGGCCACCTGTGCAGATCTACTGTGCTGTGGAACCTaGGCACCGTGCTCCCTGCCCAGCGTGTCATGGATC +
Preference number: 6 (lower is better)
Translates to: LATCADLLCCGT*APCSLPSVSWI
Trigger: GATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428314.5
CDS CCA 72 bp GTTCCCACAACCCAGGGACACACGGGAACGAATGGATaGATGAATGGGCATGGGCCGCACAGAGGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: VPTTQGHTGTNG*MNGHGPHRGRQ
Trigger: CTGGCGGCCTCTGTGCGGCCCATGCCCATTCATCCATCCATTCGTTCCCGTGTGTCCCTGGGTTGTGGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CAA 72 bp ACAAAGATCTGGCAGGCGATGTCCCAGAGGTCGACGTaGGCGTGGACTCGCTTGAGCAGCGGCTGTCGCAGC +
Preference number: 6 (lower is better)
Translates to: TKIWQAMSQRST*AWTRLSSGCRS
Trigger: GCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGACATCGCCTGCCAGATCTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 90 bp TGGATGGCATCCTCCCGCGAACACTTGTGGAATCCGCGCAGGTACTaGGGCAGCTCCTGGGTGATGGACACACTGGGCATGCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: WMASSREHLWNPRRY*GSSWVMDTLGMLGL
Trigger: GAGACCCAGCATGCCCAGTGTGTCCATCACCCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGATGCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS TCA 72 bp ACACGGCGACCTGGAGGGAGAAGCCCAGGTGGTCGCTaGGGCCCTGCTTGTGAGCGATGTGCATGCACATTT +
Preference number: 6 (lower is better)
Translates to: TRRPGGRSPGGR*GPACERCACTF
Trigger: AAATGTGCATGCACATCGCTCACAAGCAGGGCCTCAGCGACCACCTGGGCTTCTCCCTCCAGGTCGCCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp AGCCTCCTCCTCTCTCAGGACAGTGCCACCAGGCTCTaGATCCCTACTCGATTCCTCTCCCATGGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SLLLSQDSATRL*IPTRFLSHGLC
Trigger: GCACAGGCCATGGGAGAGGAATCGAGTAGGGATGCAGAGCCTGGTGGCACTGTCCTGAGAGAGGAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409090.1
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp CATGGATCTGCCGCATCACTGAGCTGCCCTGCTGGCTaGTCCTGGCATACAGCACTGGCTCTGGGAGATCAC +
Preference number: 6 (lower is better)
Translates to: HGSAASLSCPAG*SWHTALALGDH
Trigger: GTGATCTCCCAGAGCCAGTGCTGTATGCCAGGAGCAGCCAGCAGGGCAGCTCAGTGATGCGGCAGATCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp ATCTACTGTGCTGTGGAACCTGGGCACCGTGCTCCCTaGCCAGCGTGTCATGGATCTGCCGCATCACTGAGC +
Preference number: 6 (lower is better)
Translates to: IYCAVEPGHRAP*PACHGSAASLS
Trigger: GCTCAGTGATGCGGCAGATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp GGAGAACTCCTCCAGGGTGTGCAGCTTTTCCTTGGGTaGCTCCTCAGGACGTGGCTCTGTGAACTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: GELLQGVQLFLG*LLRTWLCELPL
Trigger: GAGGGGCAGTTCACAGAGCCACGTCCTGAGGAGCCACCCAAGGAAAAGCTGCACACCCTGGAGGAGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp GCTCCTGGTGCTGCACCTCCAGTAACTTCATCACGGTaGGAAAGGCGGGCGTCTCCATCACGTCTGAGGCGT +
Preference number: 6 (lower is better)
Translates to: APGAAPPVTSSR*ERRASPSRLRR
Trigger: ACGCCTCAGACGTGATGGAGACGCCCGCCTTTCCCACCGTGATGAAGTTACTGGAGGTGCAGCACCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp CGAACCTCTGCGAGAACTCCTCGAACGTGTAGCGGATaGGGAAGCCCGACTTGCGGATGTGCACGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: RTSARTPRTCSG*GSPTCGCARSP
Trigger: TGGAGACCGTGCACATCCGCAAGTCGGGCTTCCCCATCCGCTACACGTTCGAGGAGTTCTCGCAGAGGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp TCCTCCCGCGAACACTTGTGGAATCCGCGCAGGTACTaGGGCAGCTCCTGGGTGATGGACACACTGGGCATG +
Preference number: 6 (lower is better)
Translates to: SSREHLWNPRRY*GSSWVMDTLGM
Trigger: CATGCCCAGTGTGTCCATCACCCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CAA 90 bp CTCCTTCTCGAAGCTGTACTCGCCAGACCAGACTCCTCGGAGGACTaGGCGGTAAATAAGCTCGGTGCTGACAGGGTCCTCCCGGGAGTC +
Preference number: 6 (lower is better)
Translates to: LLLEAVLARPDSSED*AVNKLGADRVLPGV
Trigger: GACTCCCGGGAGGACCCTGTCAGCACCGAGCTTATTTACCGCCAAGTCCTCCGAGGAGTCTGGTCTGGCGAGTACAGCTTCGAGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 90 bp GACATCAGGCGTGTGAGGTTCTCAGGCACCAGTTCCCTCAGGATCTaGGGGACACTAGCCAGCTGGGACCGGTCGTTGTTGAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: DIRRVRFSGTSSLRI*GTLASWDRSLLNWA
Trigger: GGCCCAGTTCAACAACGACCGGTCCCAGCTGGCTAGTGTCCCCAAGATCCTGAGGGAACTGGTGCCTGAGAACCTCACACGCCTGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS TCA 72 bp AGGGAGAAGCCCAGGTGGTCGCTGAGGCCCTGCTTGTaGGCGATGTGCATGCACATTTCCCGAGATGTGGAG +
Preference number: 6 (lower is better)
Translates to: REKPRWSLRPCL*AMCMHISRDVE
Trigger: CTCCACATCTCGGGAAATGTGCATGCACATCGCTCACAAGCAGGGCCTCAGCGACCACCTGGGCTTCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS TCA 72 bp CATCACGGTGGGAAAGGCGGGCGTCTCCATCACGTCTaGGGCGTCCAGGTTCTCGAAGACCGAAGCCATGAA +
Preference number: 6 (lower is better)
Translates to: HHGGKGGRLHHV*GVQVLEDRSHE
Trigger: TTCATGGCTTCGGTCTTCGAGAACCTGGACGCCTCAGACGTGATGGAGACGCCCGCCTTTCCCACCGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp GAGAGGAGACAGGGGTACCTGGGCACACAGCTCTTGTaGACCTCTGAGAGGTCCCATATGCAGGGCACCTCT +
Preference number: 6 (lower is better)
Translates to: ERRQGYLGTQLL*TSERSHMQGTS
Trigger: AGAGGTGCCCTGCATATGGGACCTCTCAGAGGTGCACAAGAGCTGTGTGCCCAGGTACCCCTGTCTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp AGGAGGCCGATGGCCCTCCGCACATTTTTGGGGTCCTaGGCTGGTGGTGTGAAGATGGCGGCATTGATCTTC +
Preference number: 6 (lower is better)
Translates to: RRPMALRTFLGS*AGGVKMAALIF
Trigger: GAAGATCAATGCCGCCATCTTCACACCACCAGCCCAGGACCCCAAAAATGTGCGGAGGGCCATCGGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp CCAGATCTCTGTGCAGATCTACTGTGCTGTGGAACCTaGGCACCGTGCTCCCTGCCCAGCGTGTCATGGATC +
Preference number: 6 (lower is better)
Translates to: PDLCADLLCCGT*APCSLPSVSWI
Trigger: GATCCATGACACGCTGGGCAGGGAGCACGGTGCCCAGGTTCCACAGCACAGTAGATCTGCACAGAGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS CCA 72 bp AATGCCTCCTCTCCAATGTTCAGCTGGCTGGCCACCTaGCCTGTGATCCGGGAGGACCGCTTCAGCTTCATG +
Preference number: 6 (lower is better)
Translates to: NASSPMFSWLAT*PVIREDRFSFM
Trigger: CATGAAGCTGAAGCGGTCCTCCCGGATCACAGGCCAGGTGGCCAGCCAGCTGAACATTGGAGAGGAGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS CAA 72 bp AGCCCCTTCCAGTTAACAGCCAAGATCAGCTGCGTCTaGGGCAGGCGGGGGCCTGAGAGTGTGATGACTTCG +
Preference number: 6 (lower is better)
Translates to: SPFQLTAKISCV*GRRGPESVMTS
Trigger: CGAAGTCATCACACTCTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCTTGGCTGTTAACTGGAAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 72 bp CGTGTGAGGTTCTCAGGCACCAGTTCCCTCAGGATCTaGGGGACACTAGCCAGCTGGGACCGGTCGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RVRFSGTSSLRI*GTLASWDRSLL
Trigger: CAACAACGACCGGTCCCAGCTGGCTAGTGTCCCCAAGATCCTGAGGGAACTGGTGCCTGAGAACCTCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CAA 90 bp GCTCGGATCCAGTGTTCCTTGCCCTCGTCATCTTCAACCAAGACTTaGCCTGGCTTTGCCTCTTTGATGATGCCCCCGATGGCCACGCCG +
Preference number: 6 (lower is better)
Translates to: ARIQCSLPSSSSTKT*PGFASLMMPPMATP
Trigger: CGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGATGACGAGGGCAAGGAACACTGGATCCGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp CTTTCCAGTCTTTGTCTGTCCGCAGCCACACGTCAGTaGTGCCCAGGGTCATCTGGCGGAGCTTGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: LSSLCLSAATRQ*CPGSSGGACLA
Trigger: TGCAAGGCAAGCTCCGCCAGATGACCCTGGGCATCACTGACGTGTGGCTGCGGACAGACAAAGACTGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp AAGCAAAGCCCCTTCCAGTTAACAGCCAAGATCAGCTaGGTCTTGGGCAGGCGGGGGCCTGAGAGTGTGATG +
Preference number: 6 (lower is better)
Translates to: KQSPFQLTAKIS*VLGRRGPESVM
Trigger: CATCACACTCTCAGGCCCCCGCCTGCCCAAGACGCAGCTGATCTTGGCTGTTAACTGGAAGGGGCTTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp GCCCTCGTCATCTTCAACCAAGACTTTGCCTGGCTTTaGCTCTTTGATGATGCCCCCGATGGCCACGCCGGT +
Preference number: 6 (lower is better)
Translates to: ALVIFNQDFAWL*LFDDAPDGHAG
Trigger: ACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGATGACGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp GACCTGGTGACAAATTCCCCTCGGATGAGGATGGTGTaGTTGATCAGACAGTCCCGGAGCTCCTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: DLVTNSPRMRMV*LIRQSRSSWCC
Trigger: GCAGCACCAGGAGCTCCGGGACTGTCTGATCAAGCACACCATCCTCATCCGAGGGGAATTTGTCACCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp TGTCCCACCCTCTCCAAGTCATGCTGCAGGTGCCAGTaGAGTCACTGTCCCCAAACATTGCTGCCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: CPTLSKSCCRCQ*SHCPQTLLPSA
Trigger: AGCAGAGGGCAGCAATGTTTGGGGACAGTGACTGCACTGGCACCTGCAGCATGACTTGGAGAGGGTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 72 bp GCTTGTGAGCGATGTGCATGCACATTTCCCGAGATGTaGAGGCTGAGTCCACGGGGACGGTTAGGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: ACERCACTFPEM*RLSPRGRLGSL
Trigger: GAGAGAGCCTAACCGTCCCCGTGGACTCAGCCTCCACATCTCGGGAAATGTGCATGCACATCGCTCACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp GCCGATGGCCCTCCGCACATTTTTGGGGTCCTGGGCTaGTGGTGTGAAGATGGCGGCATTGATCTTCTTGAC +
Preference number: 6 (lower is better)
Translates to: ADGPPHIFGVLG*WCEDGGIDLLD
Trigger: GTCAAGAAGATCAATGCCGCCATCTTCACACCACCAGCCCAGGACCCCAAAAATGTGCGGAGGGCCATCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp GAAGCTGTACTCGCCAGACCAGACTCCTCGGAGGACTaGGCGGTAAATAAGCTCGGTGCTGACAGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: EAVLARPDSSED*AVNKLGADRVL
Trigger: GAGGACCCTGTCAGCACCGAGCTTATTTACCGCCAAGTCCTCCGAGGAGTCTGGTCTGGCGAGTACAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 72 bp CCCTGCTTCTTTGTGAGGACCAACAGGTCCCCCTTCTaGAAGGCCAGGAGGGTGGTGTCATCTGTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: PCFFVRTNRSPF*KARRVVSSVAF
Trigger: GAAGGCCACAGATGACACCACCCTCCTGGCCTTCAAGAAGGGGGACCTGTTGGTCCTCACAAAGAAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 90 bp CCCTCCCCCAGCTCCACAGAGGCCTCCTCACCTTCTTTCTGGGGCTaGTTCTTCTTCACCCAGTCAGACACCTCCCTCAAGGAATCAAAG +
Preference number: 6 (lower is better)
Translates to: PSPSSTEASSPSFWG*FFFTQSDTSLKESK
Trigger: CTTTGATTCCTTGAGGGAGGTGTCTGACTGGGTGAAGAAGAACAAGCCCCAGAAAGAAGGTGAGGAGGCCTCTGTGGAGCTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS TCA 72 bp GGAAGCCGAACACCTTCTCCACCATCTCCGTGTCAGTaGCGGTGTCGTAGATGGATCTGCGCTTCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GSRTPSPPSPCQ*RCRRWICASWQ
Trigger: CTGCCAAGAAGCGCAGATCCATCTACGACACCGTCACTGACACGGAGATGGTGGAGAAGGTGTTCGGCTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp CTCTCTCCAGTGGCCAAGATGACTTGGATGGGGATGTaGTTCTTGGACTTGACAGCCTGCAGCTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LSPVAKMTWMGM*FLDLTACSSSQ
Trigger: CTGGCTGGAGCTGCAGGCTGTCAAGTCCAAGAAGCACATCCCCATCCAAGTCATCTTGGCCACTGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000437387.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp AAGGCCTTGTTGTTGGCATGGACGCTGTTCAGCTTTTaGAGCATGGTGAGATCTGTCCCCTGCGGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: KALLLAWTLFSF*SMVRSVPCGKR
Trigger: CCGCTTCCCGCAGGGGACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp TCTGCAGACTTGAAGAGATGGTTTCCTGCCTTTGCCTaGCGGATGGTCCCATGGCCCAGCTTGGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SADLKRWFPAFA*RMVPWPSLVSA
Trigger: AGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCAGGCAAAGGCAGGAAACCATCTCTTCAAGTCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp ACGGGTATCGGAGGGGCCGCCGGATGTGTGTGTGGCTaGCTGATTTCTGGAAGTAAGTCACAGCAAACTTGG +
Preference number: 6 (lower is better)
Translates to: TGIGGAAGCVCG*LISGSKSQQTW
Trigger: CCAAGTTTGCTGTGACTTACTTCCAGAAATCAGCCAGCCACACACACATCCGGCGGCCCCTCCGATACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp GTGGCAATGCTGTCACACACATCCCGCACCCGTGTGTaGGCAACCACCTCCAGCATCTCACTGGTGTCATTG +
Preference number: 6 (lower is better)
Translates to: VAMLSHTSRTRV*ATTSSISLVSL
Trigger: CAATGACACCAGTGAGATGCTGGAGGTGGTTGCCAACACACGGGTGCGGGATGTGTGTGACAGCATTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CAA 72 bp GAAGGCCTTGTTGTTGGCATGGACGCTGTTCAGCTTTaGCAGCATGGTGAGATCTGTCCCCTGCGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: EGLVVGMDAVQL*QHGEICPLREA
Trigger: CGCTTCCCGCAGGGGACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp CCTGCCTTTGCCTGGCGGATGGTCCCATGGCCCAGCTaGGTCTCTGCTAACTCCAAGTTGAATATCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PAFAWRMVPWPS*VSANSKLNISL
Trigger: GAGGGAGATATTCAACTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCAGGCAAAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp CGGGAGGACCGCTTCAGCTTCATGGAGGAGATATCCTaGGTCCCCTTGTCCTTGCAGCCAGATCTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: REDRFSFMEEIS*VPLSLQPDLCA
Trigger: TGCACAGAGATCTGGCTGCAAGGACAAGGGGACCAAGGATATCTCCTCCATGAAGCTGAAGCGGTCCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS TCA 72 bp TGCTCTTTTTCCACTCCTCCGAGGACATCAGGCGTGTaGGGTTCTCAGGCACCAGTTCCCTCAGGATCTTGG +
Preference number: 6 (lower is better)
Translates to: CSFSTPPRTSGV*GSQAPVPSGSW
Trigger: CCAAGATCCTGAGGGAACTGGTGCCTGAGAACCTCACACGCCTGATGTCCTCGGAGGAGTGGAAAAAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS TCA 72 bp TGTTGGCATGGACGCTGTTCAGCTTTTGCAGCATGGTaGGATCTGTCCCCTGCGGGAAGCGGCTTTCTTCGT +
Preference number: 6 (lower is better)
Translates to: CWHGRCSAFAAW*DLSPAGSGFLR
Trigger: ACGAAGAAAGCCGCTTCCCGCAGGGGACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp TCCTGTATCTGTAGCCCCGAAGGACTTTCTGGATGCTaGGCGCCGCTCTGTCTAGCACCTGGCTTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: SCICSPEGLSGC*APLCLAPGFSV
Trigger: TACAGAGAAGCCAGGTGCTAGACAGAGCGGCGCTCAGCATCCAGAAAGTCCTTCGGGGCTACAGATACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp ATGGGGACTGTGTCCAGGTCAACCTCAAGCAGCTTCTaGGTCTTCGATTCCAGATCCTCAAAGTGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: MGTVSRSTSSSF*VFDSRSSKCGE
Trigger: CTCGCCGCACTTTGAGGATCTGGAATCGAAGACCCAGAAGCTGCTTGAGGTTGACCTGGACACAGTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp TCGCCGGCAAAATGGGCAATGCCAAATCTGGCATCGTGGATGTTCTaGGGCTGTAGGAAGGCCTTGTTGTTGGCATGGACGCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SPAKWAMPNLASWMF*GCRKALLLAWTLFS
Trigger: GCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp TGTTGGCAACCACCTCCAGCATCTCACTGGTGTCATTaGGGAAGTAGATCTTGTGGCAGATGCGGGAGACGT +
Preference number: 6 (lower is better)
Translates to: CWQPPPASHWCH*GSRSCGRCGRR
Trigger: ACGTCTCCCGCATCTGCCACAAGATCTACTTCCCCAATGACACCAGTGAGATGCTGGAGGTGGTTGCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS CCA 72 bp TTCCTTGCCCTCGTCATCTTCAACCAAGACTTTGCCTaGCTTTGCCTCTTTGATGATGCCCCCGATGGCCAC +
Preference number: 6 (lower is better)
Translates to: FLALVIFNQDFA*LCLFDDAPDGH
Trigger: GTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGATGACGAGGGCAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp AGTACACCTCGCCGGCAAAATGGGCAATGCCAAATCTaGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: STPRRQNGQCQI*HRGCSWAVGRP
Trigger: AGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCGAGGTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp AGATGGTTTCCTGCCTTTGCCTGGCGGATGGTCCCATaGCCCAGCTTGGTCTCTGCTAACTCCAAGTTGAAT +
Preference number: 6 (lower is better)
Translates to: RWFPAFAWRMVP*PSLVSANSKLN
Trigger: ATTCAACTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCAGGCAAAGGCAGGAAACCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp TCAAAGAAGAAGTCTCCCTCCTTCTGGCTGATGACCTaGGGAAGGGGAAGGTACAGGGAAGTTGGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: SKKKSPSFWLMT*GRGRYREVGWL
Trigger: AAGCCACCCAACTTCCCTGTACCTTCCCCTTCCCCAGGTCATCAGCCAGAAGGAGGGAGACTTCTTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491278.5
ENST00000494959.1
ENST00000496841.5
CDS CCA 72 bp AGGGCAGCCTGCCCGGTACCTGGTGGTAATGGAGTATaGTGTCTGCATTCACATCCTTCCCTGGAGATATGT +
Preference number: 6 (lower is better)
Translates to: RAACPVPGGNGV*CLHSHPSLEIC
Trigger: ACATATCTCCAGGGAAGGATGTGAATGCAGACACCATACTCCATTACCACCAGGTACCGGGCAGGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CAA 72 bp CTGGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTaGTTGTTGGCATGGACGCTGTTCAGCTTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: LASWMFLGCRKA*LLAWTLFSFCS
Trigger: GCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp ACCTCTGGGAAAGAGAGTTCCAGCAGCATCTTCTCCTaGTGGTCCAGGAAGCAAAGCCCCTTCCAGTTAACA +
Preference number: 6 (lower is better)
Translates to: TSGKESSSSIFS*WSRKQSPFQLT
Trigger: TGTTAACTGGAAGGGGCTTTGCTTCCTGGACCAGCAGGAGAAGATGCTGCTGGAACTCTCTTTCCCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000496841.5
CDS GCA 72 bp CTGCTTGGTAGTACACCTCGCCGGCAAAATGGGCAATaGCAAATCTGGCATCGTGGATGTTCTTGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: LLGSTPRRQNGQ*QIWHRGCSWAV
Trigger: TACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCGAGGTGTACTACCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp GCTTCATGGAGGAGATATCCTTGGTCCCCTTGTCCTTaGAGCCAGATCTCTGTGCAGATCTACTGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: ASWRRYPWSPCP*SQISVQIYCAV
Trigger: CACAGCACAGTAGATCTGCACAGAGATCTGGCTGCAAGGACAAGGGGACCAAGGATATCTCCTCCATGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409816.7
CDS GCA 72 bp CCTGCCCGGTACCTGGTGGTAATGGAGTATGGTGTCTaGATTCACATCCTTCCCTGGAGATATGTTGAGCCA +
Preference number: 6 (lower is better)
Translates to: PARYLVVMEYGV*IHILPWRYVEP
Trigger: TGGCTCAACATATCTCCAGGGAAGGATGTGAATGCAGACACCATACTCCATTACCACCAGGTACCGGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496841.5
CDS CCA 72 bp AATGGGCAATGCCAAATCTGGCATCGTGGATGTTCTTaGGCTGTAGGAAGGCCTTGTTGTTGGCATGGACGC +
Preference number: 6 (lower is better)
Translates to: NGQCQIWHRGCS*AVGRPCCWHGR
Trigger: GCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp TCGCCGGCAAAATGGGCAATGCCAAATCTGGCATCGTaGATGTTCTTGGGCTGTAGGAAGGCCTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SPAKWAMPNLAS*MFLGCRKALLL
Trigger: CAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTTTGCCGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp CAGTGTTCCTTGCCCTCGTCATCTTCAACCAAGACTTaGCCTGGCTTTGCCTCTTTGATGATGCCCCCGATG +
Preference number: 6 (lower is better)
Translates to: QCSLPSSSSTKT*PGFASLMMPPM
Trigger: CATCGGGGGCATCATCAAAGAGGCAAAGCCAGGCAAAGTCTTGGTTGAAGATGACGAGGGCAAGGAACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp TCGTGGATGTTCTTGGGCTGTAGGAAGGCCTTGTTGTaGGCATGGACGCTGTTCAGCTTTTGCAGCATGGTG +
Preference number: 6 (lower is better)
Translates to: SWMFLGCRKALL*AWTLFSFCSMV
Trigger: CACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp GCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTTGTaGTTGGCATGGACGCTGTTCAGCTTTTGCAGCATG +
Preference number: 6 (lower is better)
Translates to: ASWMFLGCRKAL*LAWTLFSFCSM
Trigger: CATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp AGATGGTTTCCTGCCTTTGCCTGGCGGATGGTCCCATGGCCCAGCTaGGTCTCTGCTAACTCCAAGTTGAATATCTCCCTCAGAAACTTG +
Preference number: 6 (lower is better)
Translates to: RWFPAFAWRMVPWPS*VSANSKLNISLRNL
Trigger: CAAGTTTCTGAGGGAGATATTCAACTTGGAGTTAGCAGAGACCAAGCTGGGCCATGGGACCATCCGCCAGGCAAAGGCAGGAAACCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp AATCTGGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTTGTTGTaGGCATGGACGCTGTTCAGCTTTTGCAGCATGGTGAGATCTGTC +
Preference number: 6 (lower is better)
Translates to: NLASWMFLGCRKALL*AWTLFSFCSMVRSV
Trigger: GACAGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp CCAAATCTGGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTTGTaGTTGGCATGGACGCTGTTCAGCTTTTGCAGCATGGTGAGATCT +
Preference number: 6 (lower is better)
Translates to: PNLASWMFLGCRKAL*LAWTLFSFCSMVRS
Trigger: AGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp ATGCCAAATCTGGCATCGTGGATGTTCTTGGGCTGTAGGAAGGCCTaGTTGTTGGCATGGACGCTGTTCAGCTTTTGCAGCATGGTGAGA +
Preference number: 6 (lower is better)
Translates to: MPNLASWMFLGCRKA*LLAWTLFSFCSMVR
Trigger: TCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 90 bp GGCTGGCAGTTGGTCAGGATTTTCATCAGCTGGTCCAGAGACTGTTaGAACTGGCTTCCTAAGGTGGAGGGCCGTTTATTTGAGTCTGCA +
Preference number: 6 (lower is better)
Translates to: GWQLVRIFISWSRDC*NWLPKVEGRLFESA
Trigger: TGCAGACTCAAATAAACGGCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCTGACCAACTGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS GCA 72 bp CTTGGGCAGCTCCTGGTGGTAATGGAGTATGGTGTCTaGATTCACATCCTTCCCTGGAGATATGTTGAGCCA +
Preference number: 6 (lower is better)
Translates to: LGQLLVVMEYGV*IHILPWRYVEP
Trigger: TGGCTCAACATATCTCCAGGGAAGGATGTGAATGCAGACACCATACTCCATTACCACCAGGAGCTGCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409090.1
ENST00000409816.7
ENST00000428314.5
ENST00000491278.5
ENST00000494959.1
CDS CAA 72 bp AAATGGGCAATGCCAAATCTGGCATCGTGGATGTTCTaGGGCTGTAGGAAGGCCTTGTTGTTGGCATGGACG +
Preference number: 6 (lower is better)
Translates to: KWAMPNLASWMF*GCRKALLLAWT
Trigger: CGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACATCCACGATGCCAGATTTGGCATTGCCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp ATGTTCTTGGGCTGTAGGAAGGCCTTGTTGTTGGCATaGACGCTGTTCAGCTTTTGCAGCATGGTGAGATCT +
Preference number: 6 (lower is better)
Translates to: MFLGCRKALLLA*TLFSFCSMVRS
Trigger: AGATCTCACCATGCTGCAAAAGCTGAACAGCGTCCATGCCAACAACAAGGCCTTCCTACAGCCCAAGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp CCCTCAGAAACTTGTTTTTGGAGGAGTAAACCAGGGTaGGGATATCTGTGCTCAGCACGTCTCGGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PSETCFWRSKPG*GYLCSARLGSS
Trigger: AGAAGAACCGAGACGTGCTGAGCACAGATATCCTCACCCTGGTTTACTCCTCCAAAAACAAGTTTCTGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS TCA 72 bp TGGTCAGGATTTTCATCAGCTGGTCCAGAGACTGTTTaGACTGGCTTCCTAAGGTGGAGGGCCGTTTATTTG +
Preference number: 6 (lower is better)
Translates to: WSGFSSAGPETV*TGFLRWRAVYL
Trigger: CAAATAAACGGCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CCA 72 bp AGGATTTTCATCAGCTGGTCCAGAGACTGTTTGAACTaGCTTCCTAAGGTGGAGGGCCGTTTATTTGAGTCT +
Preference number: 6 (lower is better)
Translates to: RIFISWSRDCLN*LPKVEGRLFES
Trigger: AGACTCAAATAAACGGCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5
CDS CAA 72 bp TTGGTCAGGATTTTCATCAGCTGGTCCAGAGACTGTTaGAACTGGCTTCCTAAGGTGGAGGGCCGTTTATTT +
Preference number: 6 (lower is better)
Translates to: LVRIFISWSRDC*NWLPKVEGRLF
Trigger: AAATAAACGGCCCTCCACCTTAGGAAGCCAGTTCAAACAGTCTCTGGACCAGCTGATGAAAATCCTGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409816.7
ENST00000428314.5