RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO5A (Homo sapiens)

Ensembl gene IDs: ENSG00000197535

Ensembl transcript IDs: ENST00000356338.10, ENST00000399228.5, ENST00000399229.6, ENST00000399231.7, ENST00000399233.7, ENST00000469611.1, ENST00000553916.5, ENST00000556196.5

Found 1433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGACAGCCCTCGGAAGGCACCCAGTGACTTGGGCTCCCCTGTGCTaGGGACCTAAACTGGGAAGGTGGCCTATAGCTGCAGGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: VTALGRHPVTWAPLC*GPKLGRWPIAAGLS
Trigger: GGACAGGCCTGCAGCTATAGGCCACCTTCCCAGTTTAGGTCCTCAGCACAGGGGAGCCCAAGTCACTGGGTGCCTTCCGAGGGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 90 bp TGCACACACTGCAGTGCCCACGCACACACTGACTTGTATATGGCCTaGCCAGTGACAGCCCTCGGAAGGCACCCAGTGACTTGGGCTCCC +
Preference number: 1 (lower is better)
Translates to: CTHCSAHAHTDLYMA*PVTALGRHPVTWAP
Trigger: GGGAGCCCAAGTCACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTGTGCGTGGGCACTGCAGTGTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp GACCTGAGAAGATTCAGGGTGCACGTTGAGTCGTGCTACACAGGATaGAGCTGGGGGAGGTCTGGGAGATTTCCAGGGCTGAGGCGGACA +
Preference number: 1 (lower is better)
Translates to: DLRRFRVHVESCYTG*SWGRSGRFPGLRRT
Trigger: TGTCCGCCTCAGCCCTGGAAATCTCCCAGACCTCCCCCAGCTTCATCCTGTGTAGCACGACTCAACGTGCACCCTGAATCTTCTCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp GGAAGCTGGAGCCCTGGAATAGCAGAACCTTTGTGCCACCATCGCTaGACAGGAGAAACCACCAAGGGCAGCTGTAGGAGCTCTGGCTCC +
Preference number: 1 (lower is better)
Translates to: GSWSPGIAEPLCHHR*TGETTKGSCRSSGS
Trigger: GGAGCCAGAGCTCCTACAGCTGCCCTTGGTGGTTTCTCCTGTTCAGCGATGGTGGCACAAAGGTTCTGCTATTCCAGGGCTCCAGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp GCTACACAGGATGAAGCTGGGGGAGGTCTGGGAGATTTCCAGGGCTaGGGCGGACAGCCTGTACCACGTTGCATTTTCTTAGCAACTCCC +
Preference number: 1 (lower is better)
Translates to: ATQDEAGGGLGDFQG*GGQPVPRCIFLATP
Trigger: GGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCCCAGACCTCCCCCAGCTTCATCCTGTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CCA 90 bp CCTTCCGCATGCGTAGGTACTTCTTTCTCAGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGCAGGCAGCTCTCAGTTTGTCAGCTC +
Preference number: 1 (lower is better)
Translates to: PSACVGTSFSAATLG*SSGSGCRQLSVCQL
Trigger: GAGCTGACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAAGAAGTACCTACGCATGCGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 90 bp CACCACCACTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTaGGACATCAGGCAAGTCACTGCCCCTATCTCTATTCCCAAGCTA +
Preference number: 1 (lower is better)
Translates to: HHHCSIWESRTARGL*DIRQVTAPISIPKL
Trigger: TAGCTTGGGAATAGAGATAGGGGCAGTGACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAGTGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 90 bp GTGTGTGCGGGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTATCTTGCGATACCTATTTCTGGCCAA +
Preference number: 1 (lower is better)
Translates to: VCAGQPAPDSLLNDD*FVLTEYLAIPISGQ
Trigger: TTGGCCAGAAATAGGTATCGCAAGATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCCCGCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 90 bp CCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAGAAACTTAGCATAGCATCGGGCCTG +
Preference number: 1 (lower is better)
Translates to: PPADHIHAPVLLNDG*CLGSAQKLSIASGL
Trigger: CAGGCCCGATGCTATGCTAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 90 bp GAACGAGTTTGCTCCAGGTCTTTCCGGAGCTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: ERVCSRSFRSLAISS*RLRTRPVATFASSS
Trigger: TGAAGAGGAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAGCTCCGGAAAGACCTGGAGCAAACTCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 90 bp AAACCACCTGGCGCTGAGCACTTGGTCTCCTTAAAACAAGTAACTTaGTACGCAGCACTTGCTCGGTTCCCACATGCCAGCTGCCAACTC +
Preference number: 1 (lower is better)
Translates to: KPPGAEHLVSLKQVT*YAALARFPHASCQL
Trigger: GAGTTGGCAGCTGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACCAAGTGCTCAGCGCCAGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 90 bp CCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAACTTAGCATAGCATCGGGCCTGGTA +
Preference number: 1 (lower is better)
Translates to: PADHIHAPVLLNDGC*LGSAQKLSIASGLV
Trigger: TACCAGGCCCGATGCTATGCTAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 90 bp GCCCTCACAGCACAGCCTGAGAACAAATTACAATGCACTCATCCATaGACAGAGGTCACGGCAATACAGATCCTCTTCAACGCGCATGCA +
Preference number: 1 (lower is better)
Translates to: ALTAQPENKLQCTHP*TEVTAIQILFNAHA
Trigger: TGCATGCGCGTTGAAGAGGATCTGTATTGCCGTGACCTCTGTTCATGGATGAGTGCATTGTAATTTGTTCTCAGGCTGTGCTGTGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp CCCACTAACTCAGAAGCATTCTCTAAGCTGGCCTCTCACTGGCTCTaGGACTGTTGCTGCCCCACAGTTCTAATTCCCATTTGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: PTNSEAFSKLASHWL*DCCCPTVLIPIWKG
Trigger: TCCTTTCCAAATGGGAATTAGAACTGTGGGGCAGCAACAGTCTCAGAGCCAGTGAGAGGCCAGCTTAGAGAATGCTTCTGAGTTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 90 bp GGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCACTaGCCCTATCTCTATTCCCAAGCTATCATCAGAAATGATTGTAGA +
Preference number: 1 (lower is better)
Translates to: GKQDSQRAVRHQASH*PYLYSQAIIRNDCR
Trigger: TCTACAATCATTTCTGATGATAGCTTGGGAATAGAGATAGGGGCAGTGACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 90 bp ACTTCTTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATaGAGGCAGCTCTCAGTTTGTCAGCTCTCAATTTTTCTAGATAGG +
Preference number: 1 (lower is better)
Translates to: TSFSAATLGWSSGSG*RQLSVCQLSIFLDR
Trigger: CCTATCTAGAAAAATTGAGAGCTGACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 90 bp GAGGGTCATGCAGGGCCACATCCAGTCAAAACTCTCACAAAACCTTaGGAAACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTAC +
Preference number: 1 (lower is better)
Translates to: EGHAGPHPVKTLTKP*ETGQDIPSRQDILY
Trigger: GTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGTTTCTCAAGGTTTTGTGAGAGTTTTGACTGGATGTGGCCCTGCATGACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp CTAAGGACCCGCCCAGTGGCAACTTTCGCTTCCTCTTCACTTAGTTaGAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTG +
Preference number: 1 (lower is better)
Translates to: LRTRPVATFASSSLS*RRSKSLRSFSVSEL
Trigger: CAACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAGAGGAAGCGAAAGTTGCCACTGGGCGGGTCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 90 bp TTTACTGGGCCTTGGGGTTCCCTGGTTACAAGGTATTCTTGTCAATaGCTAAAAATCTCCAGGCCACCAAGAGAGGTTAATTCAGACCCC +
Preference number: 1 (lower is better)
Translates to: FTGPWGSLVTRYSCQ*LKISRPPREVNSDP
Trigger: GGGGTCTGAATTAACCTCTCTTGGTGGCCTGGAGATTTTTAGTCATTGACAAGAATACCTTGTAACCAGGGAACCCCAAGGCCCAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 90 bp TCAGAGAGGCTTTTGCTGTTTCCTGTCTTTTTGGTTGAGACAACCTaGTACCAATTAATGCCCAAACAGAGTATTGCATCCTCCCAGAGA +
Preference number: 1 (lower is better)
Translates to: SERLLLFPVFLVETT*YQLMPKQSIASSQR
Trigger: TCTCTGGGAGGATGCAATACTCTGTTTGGGCATTAATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACAGCAAAAGCCTCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp CTTAGCAACTCCCCAACTTACAGCCTATCGGATGCTGTTAGATTCTaGCACATTTGGTACGAACCAAATGGCTATGACTTAATTGTGCAT +
Preference number: 1 (lower is better)
Translates to: LSNSPTYSLSDAVRF*HIWYEPNGYDLIVH
Trigger: ATGCACAATTAAGTCATAGCCATTTGGTTCGTACCAAATGTGTCAGAATCTAACAGCATCCGATAGGCTGTAAGTTGGGGAGTTGCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 90 bp CCTCTTAATTTCAGAGAGGCTTTTGCTGTTTCCTGTCTTTTTGGTTaGGACAACCTGCTACCAATTAATGCCCAAACAGAGTATTGCATC +
Preference number: 1 (lower is better)
Translates to: PLNFREAFAVSCLFG*DNLLPINAQTEYCI
Trigger: GATGCAATACTCTGTTTGGGCATTAATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACAGCAAAAGCCTCTCTGAAATTAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CCA 90 bp CCTTCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCACGAAAGA +
Preference number: 1 (lower is better)
Translates to: PSFHHSPVCKLTVPS*LRMSVAIKITQHER
Trigger: TCTTTCGTGCTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
3UTR GCA 90 bp ACTTTTCTTTCCATTCTCCTGTTTAGTGCAGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCATCTATGGAAGTTATACTTTTTATA +
Preference number: 1 (lower is better)
Translates to: TFLSILLFSAEEVLW*LPNNSSSMEVILFI
Trigger: TATAAAAAGTATAACTTCCATAGATGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTCTGCACTAAACAGGAGAATGGAAAGAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCGTGCTACACAGGATaGAGCTGGGGGAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPESCYTG*SWGRSG
Trigger: CCCAGACCTCCCCCAGCTTCATCCTGTGTAGCACGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDGNRPH*FGWFPG
Trigger: TCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCTCCTGCATCACAGGTaGCCACACCACCACTGCTCC +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPELLHHR*PHHHCS
Trigger: GGAGCAGTGGTGGTGTGGGCACCTGTGATGCAGGAG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCAGGCCTGTCCAGGCTaGACAGCTCACCTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVQACPG*TAHLVA
Trigger: AGCCACCAGGTGAGCTGTGCAGCCTGGACAGGCCTG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGCCTTTGGTGGGCTTTaGAGGAGTTCGTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDAFGGL*RSSCEG
Trigger: CCCCTCACACGAACTCCTGCAAAGCCCACCAAAGGC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCATCGCGGGCATTCGTaGCCTGCAGCTTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEHRGHS*PAAWRW
Trigger: CCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTCGTGCTACACAGGATaGAGCTGGGGGAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVSCYTG*SWGRSG
Trigger: CCCAGACCTCCCCCAGCTTCATCCTGTGTAGCACGA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGACAGCCAGAGGGCTGTaGGACATCAGGCAAGTCACT +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPETARGL*DIRQVT
Trigger: AGTGACTTGCCTGATGTCGCACAGCCCTCTGGCTGT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAAGGTGGCCTATAGCTaGAGGCCTGTCCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVKVAYS*RPVQAA
Trigger: TGCAGCCTGGACAGGCCTGCAGCTATAGGCCACCTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGATTCAGGGTGCACGTTaGGTCGTGCTACACAGGATG +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPEIQGAR*VVLHRM
Trigger: CATCCTGTGTAGCACGACTCAACGTGCACCCTGAAT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTCTTCTGGATCCGGATaGAGGCAGCTCTCAGTTTGT +
Preference number: 2 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDSSGSG*RQLSVC
Trigger: ACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACAGAACACTGTACCCTaGCGCAATATCCACCCAGGG +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGQNTVP*RNIHPG
Trigger: CCCTGGGTGGATATTGCGTCAGGGTACAGTGTTCTG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAGGGAAGGGGAAGAGTaGATGAGTAGGGGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVREGEE*MSRGKA
Trigger: AGCCTTTCCCCTACTCATTCACTCTTCCCCTTCCCT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAGAAAGGGCATTGTGTaGGGACTTCTCAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPERKGIV*GLLRMV
Trigger: CACCATCCTGAGAAGTCCTCACACAATGCCCTTTCT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTACCCAGAGGATCCTTaGCTATGCCTGCTAAGGAAC +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPEYPEDP*LCLLRN
Trigger: GTTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGACCTGGGAGGAAGCTaGAGCCCTGGAATAGCAGAA +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGDLGGS*SPGIAE
Trigger: TTCTGCTATTCCAGGGCTCCAGCTTCCTCCCAGGTC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCATTTACTGGGCCTTaGGGTTCCCTGGTTACAAGG +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPESFTGP*GSLVTR
Trigger: CCTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGAGGACTTCTCAGGATaGTGGCAGGTGCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVEDFSG*WQVPIF
Trigger: GAAAATGGGCACCTGCCACCATCCTGAGAAGTCCTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCTTTGGCCATTTGGCCTaGTCTGCCTTTGGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALFGHLA*SAFGGL
Trigger: AAGCCCACCAAAGGCAGACCAGGCCAAATGGCCAAA...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGC +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVAATLG*SSGSGC
Trigger: GCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGC...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTCTGGCTCCAGCACTTaGCAGGACAAAGACAGGAGA +
Preference number: 2 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSGSST*QDKDRR
Trigger: TCTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTGTCTGAAGTTGGGTaGGAAAGTGTGGCTGACAGA +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVSEVG*ESVADR
Trigger: TCTGTCAGCCACACTTTCTCACCCAACTTCAGACAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCAATGCACTCATCCATaGACAGAGGTCACGGCAATA +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPEQCTHP*TEVTAI
Trigger: TATTGCCGTGACCTCTGTTCATGGATGAGTGCATTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGCGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGC +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVRISAW*WLPSAC
Trigger: GCATGCGGAAGGCAGCCATCACCATGCAGAGATACG...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCAGCCTGTACCACGTTaGATTTTCTTAGCAACTCCC +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPEQPVPR*IFLATP
Trigger: GGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCCCAAACAGAGTATTaGATCCTCCCAGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVAQTEY*ILPEST
Trigger: AGTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAG +
Preference number: 2 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTELLNDG*CLGSAQ
Trigger: CTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCTCTCCTCTTCTGCCTaGAATACCACTCTGGATTTC +
Preference number: 2 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTELSSSA*NTTLDF
Trigger: GAAATCCAGAGTGGTATTCCAGGCAGAAGAGGAGAG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGGGCCTGGTCTGCCTTTaGTGGGCTTTGCAGGAGTTC +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVGLVCL*WALQEF
Trigger: GAACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCC...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGGGGCAACTGAGGACTaGCTCCATCCACCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCGATED*LHPPAF
Trigger: GAAGGCAGGTGGATGGAGTCAGTCCTCAGTTGCCCC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATACCCAGAGGATCCTTaGCTATGCCTGCTAAGGAAC +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGYPEDP*LCLLRN
Trigger: GTTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTATCACTAAGCAGCTaGCATTACCCAGAGGATCCT +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPELSLSS*HYPEDP
Trigger: AGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTGGCCATCATCCGCCTaGAGCAGCACTGAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFWPSSA*SSTEGR
Trigger: TCTACCTTCAGTGCTGCTTCAGGCGGATGATGGCCA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCTCCTGCATCACAGGTaGCCACACCACCACTGCTCC +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLLHHR*PHHHCS
Trigger: GGAGCAGTGGTGGTGTGGGCACCTGTGATGCAGGAG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTATTGTGCAGCTGTCTaGATCTCGGGATGTAAATCC +
Preference number: 2 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEYCAAV*ISGCKS
Trigger: GGATTTACATCCCGAGATGCAGACAGCTGCACAATA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGGCTTGGGAGGTATTGTaGAGCTGTCTGCATCTCGGG +
Preference number: 2 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPAWEVL*SCLHLG
Trigger: CCCGAGATGCAGACAGCTGCACAATACCTCCCAAGC...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGGCCTTGGGGTTCCCTaGTTACAAGGTATTCTTGTC +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGGLGVP*LQGILV
Trigger: GACAAGAATACCTTGTAACCAGGGAACCCCAAGGCC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGGACTGTGCAAAGATTaGGCTGATGGTAAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASGLCKD*ADGKHQ
Trigger: CTGGTGCTTACCATCAGCCCAATCTTTGCACAGTCC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 90 bp AGGTCTGGGAGATTTCCAGGGCTGAGGCGGACAGCCTGTACCACGTaGCATTTTCTTAGCAACTCCCCAACTTACAGCCTATCGGATGCT +
Preference number: 2 (lower is better)
Translates to: RSGRFPGLRRTACTT*HFLSNSPTYSLSDA
Trigger: AGCATCCGATAGGCTGTAAGTTGGGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCCCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTGCTACTTGTGCAGGTaGATCTGTAGGTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPECYLCR*ICRYLH
Trigger: ATGCAAATACCTACAGATTCACCTGCACAAGTAGCA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTAATCCTAAGGAATTaGCAGGCACTACACACTGGT +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPELILRN*QALHTG
Trigger: ACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTATCACTAAGCAGCTaGCATTACCCAGAGGATCCT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLSLSS*HYPEDP
Trigger: AGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGGCTTGGAGATGGGCTTaGTGTATGTCTCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVAWRWA*CMSLWQ
Trigger: CTGCCACAGAGACATACATCAAGCCCATCTCCAAGC...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCCTTATAGCGCTCCACTaGGCGAGCCTCGATTTTGAG +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFLIALH*ASLDFE
Trigger: CTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAG...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGAACAACAAGGACTGTaGAAAGATTGGGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVEQQGL*KDWADG
Trigger: ACCATCAGCCCAATCTTTGCACAGTCCTTGTTGTTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACAGCTTCTTCAGCTACTaGAAAGATATGTGGATCCAT +
Preference number: 2 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDSFFSY*KDMWIH
Trigger: ATGGATCCACATATCTTTGCAGTAGCTGAAGAAGCT...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGAGCAAAGTGCAGGCCTaGCTAGTATGTGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVSKVQA*LVCAIS
Trigger: GGAGATGGCACATACTAGGCAGGCCTGCACTTTGCT...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGACAGGCACTACACACTaGTCTTTCCATCAGAGAATG +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVTGTTH*SFHQRM
Trigger: CATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGACCTGGGAGGAAGCTaGAGCCCTGGAATAGCAGAA +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYDLGGS*SPGIAE
Trigger: TTCTGCTATTCCAGGGCTCCAGCTTCCTCCCAGGTC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTAAAACAAGTAACTTaGTACGCAGCACTTGCTCGG +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPELKQVT*YAALAR
Trigger: CCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGCCACATTGGCCTCACTaGCAGAACCACTCACAGTTG +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVPHWPH*QNHSQL
Trigger: CAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGG...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCCCTTTTCCTCCACATTaGCCTCACTGGCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLPFPPH*PHWQNH
Trigger: GTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGG...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTGCTCTTTGGCCATTTaGCCTGGTCTGCCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFCSLAI*PGLPLV
Trigger: CACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTGCTACTTGTGCAGGTaGATCTGTAGGTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVCYLCR*ICRYLH
Trigger: ATGCAAATACCTACAGATTCACCTGCACAAGTAGCA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGATGCTGTTAGATTCTaGCACATTTGGTACGAACCA +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVDAVRF*HIWYEP
Trigger: TGGTTCGTACCAAATGTGTCAGAATCTAACAGCATC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTGTGCCACCATCGCTaGACAGGAGAAACCACCAAG +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLCHHR*TGETTK
Trigger: CTTGGTGGTTTCTCCTGTTCAGCGATGGTGGCACAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAGGGAAGGGGAAGAGTaGATGAGTAGGGGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYREGEE*MSRGKA
Trigger: AGCCTTTCCCCTACTCATTCACTCTTCCCCTTCCCT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCTGCATGTAGTAAGGTaGATGGGGAGGGGATTATTA +
Preference number: 2 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLHVVR*MGRGLL
Trigger: TAATAATCCCCTCCCCATTCACCTTACTACATGCAG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGAATGGAGAGCCTGATTaGCATTATCTACAATCCAGT +
Preference number: 2 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTENGEPD*HYLQSS
Trigger: ACTGGATTGTAGATAATGTCAATCAGGCTCTCCATT...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCGGACACGGTAGCGGCTaGAAAATTCTTGGTAAGTCC +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFGHGSG*KILGKS
Trigger: GGACTTACCAAGAATTTTTCAGCCGCTACCGTGTCC...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTCCACCTGCCTTCAGTaGACAGTCAAACAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSTCLQ*TVKQQA
Trigger: TGCCTGCTGTTTGACTGTGCACTGAAGGCAGGTGGA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGAACAACAAGGACTGTaGAAAGATTGGGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGEQQGL*KDWADG
Trigger: ACCATCAGCCCAATCTTTGCACAGTCCTTGTTGTTC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTCTCAGCTGCTGCACTaGCCTCTTCTCATCAAACGT +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFSQLLH*PLLIKR
Trigger: ACGTTTGATGAGAAGAGGGCAGTGCAGCAGCTGAGA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLTVPS*LRMSVA
Trigger: AGCAACACTCATCCTTAACCAACTAGGTACCGTGAG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTACAGGCACTACACACTaGTCTTTCCATCAGAGAATG +
Preference number: 2 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASTGTTH*SFHQRM
Trigger: CATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCAATCCTCAAACTaGCCCAAAGATCCCCATAGT +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGKQSSN*PKDPHS
Trigger: ACTATGGGGATCTTTGGGCCAGTTTGAGGATTGCTT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTAATCCTAAGGAATTaGCAGGCACTACACACTGGT +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLILRN*QALHTG
Trigger: ACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGGGAAGGGGAAGAGTaGATGAGTAGGGGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCREGEE*MSRGKA
Trigger: AGCCTTTCCCCTACTCATTCACTCTTCCCCTTCCCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATCAAAGCCTTAACCTaGGGAAAAGCTGCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGIKALT*GKAAKR
Trigger: CCTTTTTGCAGCTTTTCCTCAGGTTAAGGCTTTGAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGACTTACTGAGTAACTaGAGCTTTTTCTCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: ALEGKGARVKAALTAQPEDLLSN*SFFSLE
Trigger: TTCTAGAGAGAAAAAGCTGCAGTTACTCAGTAAGTC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCGAACCAAATGGCTATaGCTTAATTGTGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVRTKWL*LNCALK
Trigger: TTTCAATGCACAATTAAGTCATAGCCATTTGGTTCG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGGAGATTTCCAGGGCTaGGGCGGACAGCCTGTACCA +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLGDFQG*GGQPVP
Trigger: TGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGGTATTCTTGTCAATaGCTAAAAATCTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRYSCQ*LKISRP
Trigger: TGGCCTGGAGATTTTTAGTCATTGACAAGAATACCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCAAGTTGTAAGGGTGTaGGGTGAGTCTGCATGTAGT +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYQVVRV*GESACS
Trigger: ACTACATGCAGACTCACCTCACACCCTTACAACTTG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGCCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATT +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVPTLPK*RMPASI
Trigger: AATACTTGCTGGCATCCTTCACTTAGGCAATGTTGG...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYEEVLW*LPNNSS
Trigger: TGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCGGCCTGCCTAGTATGTaGCATCTCCTTTGCATCATC +
Preference number: 2 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCGLPSM*HLLCII
Trigger: GATGATGCAAAGGAGATGGCACATACTAGGCAGGCC...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGGAAGCTGGAGCCCTaGAATAGCAGAACCTTTGTG +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRKLEP*NSRTFV
Trigger: CACAAAGGTTCTGCTATTCCAGGGCTCCAGCTTCCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCAGAACACTGTACCCTaGCGCAATATCCACCCAGGG +
Preference number: 2 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDQNTVP*RNIHPG
Trigger: CCCTGGGTGGATATTGCGTCAGGGTACAGTGTTCTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGATAGACGATTAAGTTaGGGGAAGGGGAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYDRRLS*GKGKSE
Trigger: TTCACTCTTCCCCTTCCCTCAACTTAATCGTCTATC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCAAGTTGTAAGGGTGTaGGGTGAGTCTGCATGTAGT +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCQVVRV*GESACS
Trigger: ACTACATGCAGACTCACCTCACACCCTTACAACTTG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCACTCTCCACTTACGATaGTGGACTGATTTCGTTCAT +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFTLHLR*WTDFVH
Trigger: ATGAACGAAATCAGTCCATCATCGTAAGTGGAGAGT...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCEEVLW*LPNNSS
Trigger: TGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCAGCCTGTACCACGTTaGATTTTCTTAGCAACTCCC +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCQPVPR*IFLATP
Trigger: GGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAACCTGAGGAAAAGCTaGAAAAAGGGAAATTACTTT +
Preference number: 2 (lower is better)
Translates to: HTDLYMACPVTALGRHPVNLRKS*KKGNYF
Trigger: AAAGTAATTTCCCTTTTTGCAGCTTTTCCTCAGGTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGAGAACCACTCACAGTTaGAAAGTATCGCATGGCATA +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVRTTHS*KVSHGI
Trigger: TATGCCATGCGATACTTTGCAACTGTGAGTGGTTCT...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGACTTCCCAAAACGGCTaGTATTATCATTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPTSQNG*YYHSWL
Trigger: CAACCAGGAATGATAATAGCAGCCGTTTTGGGAAGT...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGATGTGCCATCTCCTTTaGATCATCCACTCCTTCAAT +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVMCHLL*IIHSFN
Trigger: ATTGAAGGAGTGGATGATGCAAAGGAGATGGCACAT...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCTGCCTAAGTGAAGGATaGCAGCAAGTATTCGGAAAA +
Preference number: 2 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLCLSEG*QQVFGK
Trigger: TTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCA...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAAGCAATCCTCAAACTaGCCCAAAGATCCCCATAGT +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYKQSSN*PKDPHS
Trigger: ACTATGGGGATCTTTGGGCCAGTTTGAGGATTGCTT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGCAGGAAAGCATATCTaGACCCAGGTACTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCAGKHI*TQVLFL
Trigger: CAGAAACAGTACCTGGGTCCAGATATGCTTTCCTGC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGATGCTGTTAGATTCTaGCACATTTGGTACGAACCA +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYDAVRF*HIWYEP
Trigger: TGGTTCGTACCAAATGTGTCAGAATCTAACAGCATC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCTGCATGTAGTAAGGTaGATGGGGAGGGGATTATTA +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLHVVR*MGRGLL
Trigger: TAATAATCCCCTCCCCATTCACCTTACTACATGCAG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCCTTCAATCACAGGACTaGCTCCTTGTTTTGTGTAAT +
Preference number: 2 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLLQSQD*LLVLCN
Trigger: ATTACACAAAACAAGGAGGCAGTCCTGTGATTGAAG...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGACATTCTTGCATGTTTaGTTTCTGTCACTCAGCACA +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVTFLHV*FLSLST
Trigger: TGTGCTGAGTGACAGAAAGCAAACATGCAAGAATGT...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCCCCGCACGTATCTCTaGATGGTGATGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSPRTYL*MVMAAF
Trigger: GAAGGCAGCCATCACCATGCAGAGATACGTGCGGGG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAAGCAATCCTCAAACTaGCCCAAAGATCCCCATAGT +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCKQSSN*PKDPHS
Trigger: ACTATGGGGATCTTTGGGCCAGTTTGAGGATTGCTT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCGATTTCGTTCATCTCTaGCCATTTGCTTGTAAGCTT +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFDFVHL*PFACKL
Trigger: AAGCTTACAAGCAAATGGCCAGAGATGAACGAAATC...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCCTCATCAAACGTGAATaGGAACTTGAAGTCATTAGG +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFLIKRE*ELEVIR
Trigger: CCTAATGACTTCAAGTTCCCATTCACGTTTGATGAG...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CAA 90 bp TGGCTCTGTTTTATCACTAAGCAGCTGACATTACCCAGAGGATCCTaGACTATGCCTGCTAAGGAACTCTATGAATTAGTGACGGGGGTG +
Preference number: 2 (lower is better)
Translates to: WLCFITKQLTLPRGS*TMPAKELYELVTGV
Trigger: CACCCCCGTCACTAATTCATAGAGTTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAAAACAGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 90 bp TCTAATCTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTTGGTTCTGCGCAGAAACTTAGCATA +
Preference number: 2 (lower is better)
Translates to: SNLVPPADHIHAPVL*NDGCCLGSAQKLSI
Trigger: TATGCTAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAGATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTGCTACTTGTGCAGGTaGATCTGTAGGTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCCYLCR*ICRYLH
Trigger: ATGCAAATACCTACAGATTCACCTGCACAAGTAGCA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAGAGAATGGACTTACTaGGTAACTGCAGCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYREWTY*VTAAFS
Trigger: AGAAAAAGCTGCAGTTACTCAGTAAGTCCATTCTCT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCATATCACCCATGTTCTaGCCACTGTATGCATTAATA +
Preference number: 2 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFISPMF*PLYALI
Trigger: TATTAATGCATACAGTGGTCAGAACATGGGTGATAT...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATC +
Preference number: 2 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCAFSSS*NSSGSI
Trigger: GATGCTACCAGAACTATTTCAAGATGATGAGAAGGC...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACGGGCATTCGTGGCCTaGAGCTTGGAGATGGGCTTG +
Preference number: 2 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSRAFVA*SLEMGL
Trigger: CAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGTACTGCAAAGATATGTaGATCCATATCACCCATGTT +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVYCKDM*IHITHV
Trigger: AACATGGGTGATATGGATCCACATATCTTTGCAGTA...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGTTTGTCTTACCAAACTaGTATTTGTCCTTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVFVLPN*YLSLSS
Trigger: ACTGGACAAGGACAAATACCAGTTTGGTAAGACAAA...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCAAAGTTTCAAGACCTaGATCGTGAATATTCTGACA +
Preference number: 2 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYQSFKT*IVNILT
Trigger: TGTCAGAATATTCACGATTCAGGTCTTGAAACTTTG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTTCCAATGGACTCCATaGTGGGGTTGGAGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSFQWTP*WGWRPR
Trigger: TCTTGGCCTCCAACCCCATCATGGAGTCCATTGGAA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLEEVLW*LPNNSS
Trigger: TGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLTVPS*LRMSVA
Trigger: AGCAACACTCATCCTTAACCAACTAGGTACCGTGAG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLTVPS*LRMSVA
Trigger: AGCAACACTCATCCTTAACCAACTAGGTACCGTGAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 90 bp ATGGGTGTGGGGAGAGTAACTTTCCTCTTAATTTCAGAGAGGCTTTaGCTGTTTCCTGTCTTTTTGGTTGAGACAACCTGCTACCAATTA +
Preference number: 2 (lower is better)
Translates to: MGVGRVTFLLISERL*LFPVFLVETTCYQL
Trigger: TAATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACAGCAAAAGCCTCTCTGAAATTAAGAGGAAAGTTACTCTCCCCACACCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATCAAAGCCTTAACCTaGGGAAAAGCTGCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLIKALT*GKAAKR
Trigger: CCTTTTTGCAGCTTTTCCTCAGGTTAAGGCTTTGAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTAAAACAAGTAACTTaGTACGCAGCACTTGCTCGG +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLKQVT*YAALAR
Trigger: CCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTGTTTCCTGTCTTTTTaGTTGAGACAACCTGCTACC +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLCFLSF*LRQPAT
Trigger: GGTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCAAAGTTTCAAGACCTaGATCGTGAATATTCTGACA +
Preference number: 2 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDQSFKT*IVNILT
Trigger: TGTCAGAATATTCACGATTCAGGTCTTGAAACTTTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGGTATTCTTGTCAATaGCTAAAAATCTCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLRYSCQ*LKISRP
Trigger: TGGCCTGGAGATTTTTAGTCATTGACAAGAATACCT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR TCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACTTACGATGATGGACTaGTTTCGTTCATCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSLTMMD*FRSSLA
Trigger: GGCCAGAGATGAACGAAATCAGTCCATCATCGTAAG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCAGTTTCTCTCCTCTTCTaGCTGGAATACCACTCTGGA +
Preference number: 2 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSVSLLF*LEYHSG
Trigger: TCCAGAGTGGTATTCCAGGCAGAAGAGGAGAGAAAC...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTATAAACGAGGAACTTaGGGCCCATGTAAATTAACA +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLYKRGT*GPCKLT
Trigger: TGTTAATTTACATGGGCCTCAAGTTCCTCGTTTATA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGACTTACTGAGTAACTaGAGCTTTTTCTCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLDLLSN*SFFSLE
Trigger: TTCTAGAGAGAAAAAGCTGCAGTTACTCAGTAAGTC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGTTAAGGATGAGTGTTaGTATAAAGATAACACAGCA +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLVKDEC*YKDNTA
Trigger: TGCTGTGTTATCTTTATAGCAACACTCATCCTTAAC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTCAAGGTTGAAAATATaGACTGAAGGAATCAGATCT +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSRLKI*TEGIRS
Trigger: AGATCTGATTCCTTCAGTGCATATTTTCAACCTTGA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTCTCTAACACATTCTTaGATGTTTGCTTTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSSLTHS*MFAFCH
Trigger: GTGACAGAAAGCAAACATGCAAGAATGTGTTAGAGA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAATTCCCTATCAGTTaGCTTCGGAATATGTTTTTG +
Preference number: 2 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKFPIS*LRNMFL
Trigger: CAAAAACATATTCCGAAGCCAACTGATAGGGAATTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR GCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTGTTCTGACCACTGTATaGATTAATAATATCTTCTCC +
Preference number: 2 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSVLTTV*INNIFS
Trigger: GGAGAAGATATTATTAATGCATACAGTGGTCAGAAC...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCAACACCAATAAAAGAGTaGTGTTTGACAGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSTPIKE*CLTAEW
Trigger: CCATTCTGCTGTCAAACAGCACTCTTTTATTGGTGT...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACCTGGAATACCACTCTaGATTTCTCTAAAAGATAAG +
Preference number: 2 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSPGIPL*ISLKDK
Trigger: CTTATCTTTTAGAGAAATCCAGAGTGGTATTCCAGG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAAGGCACCCAGTGACTaGGGCTCCCCTGTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: ALEGKGARVKAALTAQPEKAPSD*GSPVLR
Trigger: CCTCAGCACAGGGGAGCCCAAGTCACTGGGTGCCTT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTGGCCTGGTCTGCCTTaGGTGGGCTTTGCAGGAGTT +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEWPGLP*VGFAGV
Trigger: AACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCCA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 72 bp CTCGGAAGGCACCCAGTGACTTGGGCTCCCCTGTGCTaGGGACCTAAACTGGGAAGGTGGCCTATAGCTGCA +
Preference number: 3 (lower is better)
Translates to: LGRHPVTWAPLC*GPKLGRWPIAA
Trigger: TGCAGCTATAGGCCACCTTCCCAGTTTAGGTCCTCAGCACAGGGGAGCCCAAGTCACTGGGTGCCTTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 72 bp TGCAGTGCCCACGCACACACTGACTTGTATATGGCCTaGCCAGTGACAGCCCTCGGAAGGCACCCAGTGACT +
Preference number: 3 (lower is better)
Translates to: CSAHAHTDLYMA*PVTALGRHPVT
Trigger: AGTCACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTGTGCGTGGGCACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCACGCACACACTGACTaGTATATGGCCTGCCCAGTG +
Preference number: 3 (lower is better)
Translates to: ALEGKGARVKAALTAQPEHAHTD*YMACPV
Trigger: CACTGGGCAGGCCATATACAAGTCAGTGTGTGCGTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGACCTTTTCCTCCACATaGGCCTCACTGGCAGAACCA +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTETFSST*ASLAEP
Trigger: TGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGT...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCATGCTTGGGAGGTATaGTGCAGCTGTCTGCATCTC +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEHAWEV*CSCLHL
Trigger: GAGATGCAGACAGCTGCACAATACCTCCCAAGCATG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 72 bp ATCGGGCCTGGTAGCCCCGCACGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGCGTAGGTACTTCTTTC +
Preference number: 3 (lower is better)
Translates to: IGPGSPARISAW*WLPSACVGTSF
Trigger: GAAAGAAGTACCTACGCATGCGGAAGGCAGCCATCACCATGCAGAGATACGTGCGGGGCTACCAGGCCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACTCTGGCTCCAGCACTaGACAGGACAAAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLWLQH*TGQRQE
Trigger: CTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGAG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCCTGGCGCTGAGCACTaGGTCTCCTTAAAACAAGTA +
Preference number: 3 (lower is better)
Translates to: ALEGKGARVKAALTAQPEPGAEH*VSLKQV
Trigger: TACTTGTTTTAAGGAGACCAAGTGCTCAGCGCCAGG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 72 bp CTTGGTAAGTCCACCGTGAGGGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGACACCACATGCTCTCA +
Preference number: 3 (lower is better)
Translates to: LGKSTVRGNRPH*FGWFPGHHMLS
Trigger: TGAGAGCATGTGGTGTCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCCCCTCACGGTGGACTTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGGGTGTGTCTGAAGTaGGGTGAGAAAGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRVCLK*GEKVWL
Trigger: CAGCCACACTTTCTCACCCAACTTCAGACACACCCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCTGCCCCACTGTTTTCTaGTGCTCTTTGGCCATTTGG +
Preference number: 3 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALCPTVF*CSLAIW
Trigger: CCAAATGGCCAAAGAGCACAAGAAAACAGTGGGGCA...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 72 bp GATGAAGCTGGGGGAGGTCTGGGAGATTTCCAGGGCTaGGGCGGACAGCCTGTACCACGTTGCATTTTCTTA +
Preference number: 3 (lower is better)
Translates to: DEAGGGLGDFQG*GGQPVPRCIFL
Trigger: TAAGAAAATGCAACGTGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCCCAGACCTCCCCCAGCTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 72 bp AGCCCTGGAATAGCAGAACCTTTGTGCCACCATCGCTaGACAGGAGAAACCACCAAGGGCAGCTGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: SPGIAEPLCHHR*TGETTKGSCRS
Trigger: GCTCCTACAGCTGCCCTTGGTGGTTTCTCCTGTTCAGCGATGGTGGCACAAAGGTTCTGCTATTCCAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 72 bp ATGTGCTTGGCCAAAGCATCGCGGGCATTCGTGGCCTaGAGCTTGGAGATGGGCTTGATGTATGTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: MCLAKASRAFVA*SLEMGLMYVSV
Trigger: CACAGAGACATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATGCTTTGGCCAAGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp TGCTCCAGGTCTTTCCGGAGCTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCAGTGGCAACTTTCGCT +
Preference number: 3 (lower is better)
Translates to: CSRSFRSLAISS*RLRTRPVATFA
Trigger: AGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAGCTCCGGAAAGACCTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 72 bp TGCGTAGGTACTTCTTTCTCAGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGCAGGCAGCTCTCAGTT +
Preference number: 3 (lower is better)
Translates to: CVGTSFSAATLG*SSGSGCRQLSV
Trigger: AACTGAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAAGAAGTACCTACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATCATTTACTGGGCCTaGGGGTTCCCTGGTTACAAG +
Preference number: 3 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGIIYWA*GFPGYK
Trigger: CTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTTCATCTCTGGCCATTaGCTTGTAAGCTTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEFISGH*LVSFFS
Trigger: GCTGAAGAAGCTTACAAGCAAATGGCCAGAGATGAA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCCAGAACCACTCACAGTaGCAAAGTATCGCATGGCAT +
Preference number: 3 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALQNHSQ*QSIAWH
Trigger: ATGCCATGCGATACTTTGCAACTGTGAGTGGTTCTG...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCACATTCTTGCATGTTaGCTTTCTGTCACTCAGCAC +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEHILAC*LSVTQH
Trigger: GTGCTGAGTGACAGAAAGCAAACATGCAAGAATGTG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 72 bp GCTTCTTATAGCGCTCCACTGAGCGAGCCTCGATTTTaGGCTTCTTTAGCTCACGCTTGGCCATCATCCGCC +
Preference number: 3 (lower is better)
Translates to: ASYSAPLSEPRF*ASLAHAWPSSA
Trigger: GGCGGATGATGGCCAAGCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTATCTTGCGATACCTATT +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDD*FVLTEYLAIPI
Trigger: AATAGGTATCGCAAGATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 72 bp GGCGCTGAGCACTTGGTCTCCTTAAAACAAGTAACTTaGTACGCAGCACTTGCTCGGTTCCCACATGCCAGC +
Preference number: 3 (lower is better)
Translates to: GAEHLVSLKQVT*YAALARFPHAS
Trigger: GCTGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACCAAGTGCTCAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CCA 72 bp TACTTCTTTCTCAGCAGCCACCCTCGGATGGTCTTCTaGATCCGGATGCAGGCAGCTCTCAGTTTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: YFFLSSHPRMVF*IRMQAALSLSA
Trigger: AGCTGACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTCTGGCTCCAGCACTaGACAGGACAAAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLWLQH*TGQRQE
Trigger: CTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGAG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR GCA 72 bp CAAAGTGCAGGCCTGCCTAGTATGTGCCATCTCCTTTaGATCATCCACTCCTTCAATCACAGGACTGCCTCC +
Preference number: 3 (lower is better)
Translates to: QSAGLPSMCHLL*IIHSFNHRTAS
Trigger: GGAGGCAGTCCTGTGATTGAAGGAGTGGATGATGCAAAGGAGATGGCACATACTAGGCAGGCCTGCACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 72 bp TGGAGGCCAAGACCTTTTCCTCCACATTGGCCTCACTaGCAGAACCACTCACAGTTGCAAAGTATCGCATGG +
Preference number: 3 (lower is better)
Translates to: WRPRPFPPHWPH*QNHSQLQSIAW
Trigger: CCATGCGATACTTTGCAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGTCTTGGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATTAATCCTAAGGAATaGACAGGCACTACACACTGG +
Preference number: 3 (lower is better)
Translates to: HTDLYMACPVTALGRHPVINPKE*TGTTHW
Trigger: CCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGCATTGAAAACCGCATaGACAACCAGGAAAAACTGG +
Preference number: 3 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGALKTA*TTRKNW
Trigger: CCAGTTTTTCCTGGTTGTCAATGCGGTTTTCAATGC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTTGTTCAAATGTGTGTaGTACAATTTTTGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTELFKCV*YNFWAQ
Trigger: CTGGGCCCAAAAATTGTACAACACACATTTGAACAA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTTCTCTAACACATTCTaGCATGTTTGCTTTCTGTCA +
Preference number: 3 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDFSNTF*HVCFLS
Trigger: TGACAGAAAGCAAACATGCAAGAATGTGTTAGAGAA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACGGGCAAGAAATGTATaGTCAATTTTTGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRARNV*SIFAWT
Trigger: TGTCCAGGCAAAAATTGACAATACATTTCTTGCCCG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGTCGGCAGAATCTTCTaGTACCTTCAAGAAAATGGT +
Preference number: 3 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASVGRIF*YLQENG
Trigger: ACCATTTTCTTGAAGGTACAAGAAGATTCTGCCGAC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGGGTGTGTCTGAAGTaGGGTGAGAAAGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRVCLK*GEKVWL
Trigger: CAGCCACACTTTCTCACCCAACTTCAGACACACCCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATTTCAGAGAGGCTTTaGCTGTTTCCTGTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: HTDLYMACPVTALGRHPVISERL*LFPVFL
Trigger: CAAAAAGACAGGAAACAGCAAAAGCCTCTCTGAAAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCTTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTAT +
Preference number: 3 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCFVACS*EMGLMY
Trigger: ATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAA...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp GACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCACTaGCCCTATCTCTATTCCCAAGCTATCATCAGAAAT +
Preference number: 3 (lower is better)
Translates to: DSQRAVRHQASH*PYLYSQAIIRN
Trigger: ATTTCTGATGATAGCTTGGGAATAGAGATAGGGGCAGTGACTTGCCTGATGTCGCACAGCCCTCTGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGAGAATTTGATGCAATaGGTAGTGTTTCTGGTTGAT +
Preference number: 3 (lower is better)
Translates to: HTDLYMACPVTALGRHPVENLMQ*VVFLVD
Trigger: ATCAACCAGAAACACTACCAATTGCATCAAATTCTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCGTGCCTTTAGGCATCTaGCATTCCTCATCCAGTAAA +
Preference number: 3 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFVPLGI*HSSSSK
Trigger: TTTACTGGATGAGGAATGCAAGATGCCTAAAGGCAC...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTaGTCGGTTCCCACATGCCAGCTGCCAACTCTGATA +
Preference number: 3 (lower is better)
Translates to: GLLKTSNLVRST*SVPTCQLPTLI
Trigger: TATCAGAGTTGGCAGCTGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCACAGCCTGTACCACGTaGCATTTTCTTAGCAACTCC +
Preference number: 3 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCTACTT*HFLSNS
Trigger: GGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 72 bp GCACATCTTTCTGCTTCATTAGGACACGGTAGCGGCTaGAAAATTCTTGGTAAGTCCACCGTGAGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: AHLSASLGHGSG*KILGKSTVRGN
Trigger: GTTTCCCCTCACGGTGGACTTACCAAGAATTTTTCAGCCGCTACCGTGTCCTAATGAAGCAGAAAGATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 72 bp GAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTaGACCCAGGTACTGTTTCTGCATTACTTTCAACAG +
Preference number: 3 (lower is better)
Translates to: EVTEESAAGKHI*TQVLFLHYFQQ
Trigger: CTGTTGAAAGTAATGCAGAAACAGTACCTGGGTCCAGATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCATAAAAGAGTGCTGTTaGACAGCAGAATGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCIKECC*TAEWRA
Trigger: GGCTCTCCATTCTGCTGTCAAACAGCACTCTTTTAT...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGTGGATGATGAAAGCTTaGTTTGATAGACGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVWMMKA*FDRRGF
Trigger: AAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCA...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCATTAATCCTAAGGAATaGACAGGCACTACACACTGG +
Preference number: 3 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCINPKE*TGTTHW
Trigger: CCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAAT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTGCCCAAACAGAGTATaGCATCCTCCCAGAGAGCAC +
Preference number: 3 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLCPNRV*HPPREH
Trigger: GTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGCA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGTCGGAAAATTCCCATTaGATGAGATTCACTAATTCC +
Preference number: 3 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPSENSH*MRFTNS
Trigger: GGAATTAGTGAATCTCATCAAATGGGAATTTTCCGA...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCCACTGGTATTCCACTTaGTCAGCAAAATGTTGGATG +
Preference number: 3 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAAGTGGAATACCAGTG...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCCACGGAAAAAGATCTTaGTCTTACCAAACTGGTATT +
Preference number: 3 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFHGKRS*SYQTGI
Trigger: AATACCAGTTTGGTAAGACAAAGATCTTTTTCCGTG...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 72 bp CGCCCAGTGGCAACTTTCGCTTCCTCTTCACTTAGTTaGAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTC +
Preference number: 3 (lower is better)
Translates to: RPVATFASSSLS*RRSKSLRSFSV
Trigger: GACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAGAGGAAGCGAAAGTTGCCACTGGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp CACATACATGCGCCAGTACTTTTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAACTTAGCATAGCATCG +
Preference number: 3 (lower is better)
Translates to: HIHAPVLLNDGC*LGSAQKLSIAS
Trigger: CGATGCTATGCTAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAGTACTGGCGCATGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp GACCACATACATGCGCCAGTACTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAGAAACTTAGCATAGCA +
Preference number: 3 (lower is better)
Translates to: DHIHAPVLLNDG*CLGSAQKLSIA
Trigger: TGCTATGCTAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTCAACAATAGCCACTTaGTCTAATCCTACCCCTAAA +
Preference number: 3 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSTIAT*SNPTPK
Trigger: TTTAGGGGTAGGATTAGACAAAGTGGCTATTGTTGA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGAAAACCTGTCAAGGTaGAAAATATGCACTGAAGGA +
Preference number: 3 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCENLSR*KICTEG
Trigger: TCCTTCAGTGCATATTTTCAACCTTGACAGGTTTTC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAGAGAGAAAGGGCATaGTGTGAGGACTTCTCAGGA +
Preference number: 3 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKRERA*CEDFSG
Trigger: TCCTGAGAAGTCCTCACACAATGCCCTTTCTCTCTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTACCCAGAGGATCCTaGACTATGCCTGCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLPRGS*TMPAKE
Trigger: TTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTTCTGCTCATCAACTTaGCGCTGCAGCTGCATGATC +
Preference number: 3 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSFCSST*RCSCMI
Trigger: GATCATGCAGCTGCAGCGCAAAGTTGATGAGCAGAA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 72 bp CTTTCCATTCTCCTGTTTAGTGCAGAGGAGGTTCTTTaGTGCCTTCCTAACAACAGCTCATCTATGGAAGTT +
Preference number: 3 (lower is better)
Translates to: LSILLFSAEEVL*CLPNNSSSMEV
Trigger: AACTTCCATAGATGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTCTGCACTAAACAGGAGAATGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCGGGCAAGAAATGTATaGTCAATTTTTGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDRARNV*SIFAWT
Trigger: TGTCCAGGCAAAAATTGACAATACATTTCTTGCCCG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGCATTGAAAACCGCATaGACAACCAGGAAAAACTGG +
Preference number: 3 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLALKTA*TTRKNW
Trigger: CCAGTTTTTCCTGGTTGTCAATGCGGTTTTCAATGC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSHAPVL*NDGCCL
Trigger: AAGGCAGCAACCATCATTCAAAAGTACTGGCGCATG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR TCA 72 bp TCCCCAACTTACAGCCTATCGGATGCTGTTAGATTCTaGCACATTTGGTACGAACCAAATGGCTATGACTTA +
Preference number: 3 (lower is better)
Translates to: SPTYSLSDAVRF*HIWYEPNGYDL
Trigger: TAAGTCATAGCCATTTGGTTCGTACCAAATGTGTCAGAATCTAACAGCATCCGATAGGCTGTAAGTTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 72 bp TCTGCATCTCGGGATGTAAATCCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATTCGGAAAATTCCCATT +
Preference number: 3 (lower is better)
Translates to: SASRDVNPTLPK*RMPASIRKIPI
Trigger: AATGGGAATTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCAATGTTGGATTTACATCCCGAGATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR GCA 72 bp TCCATTCTCCTGTTTAGTGCAGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCATCTATGGAAGTTATA +
Preference number: 3 (lower is better)
Translates to: SILLFSAEEVLW*LPNNSSSMEVI
Trigger: TATAACTTCCATAGATGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTCTGCACTAAACAGGAGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGTCGGCAGAATCTTCTaGTACCTTCAAGAAAATGGT +
Preference number: 3 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLVGRIF*YLQENG
Trigger: ACCATTTTCTTGAAGGTACAAGAAGATTCTGCCGAC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 72 bp GTGGCTGAAGTTGGACTGATGGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATCTTAAACTTGCTTGAT +
Preference number: 3 (lower is better)
Translates to: VAEVGLMAFSSS*NSSGSILNLLD
Trigger: ATCAAGCAAGTTTAAGATGCTACCAGAACTATTTCAAGATGATGAGAAGGCCATCAGTCCAACTTCAGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCACAGGACTGCCTCCTaGTTTTGTGTAATTAAAGTT +
Preference number: 3 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSHRTAS*FCVIKV
Trigger: AACTTTAATTACACAAAACAAGGAGGCAGTCCTGTG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATATGTGCCATCTCCTTaGCATCATCCACTCCTTCAA +
Preference number: 3 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSYVPSP*HHPLLQ
Trigger: TTGAAGGAGTGGATGATGCAAAGGAGATGGCACATA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTTACCAAACTGGTATTaGTCCTTGTCCAGTATCAGT +
Preference number: 3 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSLPNWY*SLSSIS
Trigger: ACTGATACTGGACAAGGACAAATACCAGTTTGGTAA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CCA 72 bp TTGATTAATCCTAAGGAATTGACAGGCACTACACACTaGTCTTTCCATCAGAGAATGGACTTACTGAGTAAC +
Preference number: 3 (lower is better)
Translates to: LINPKELTGTTH*SFHQRMDLLSN
Trigger: GTTACTCAGTAAGTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACGGGCAAGAAATGTATaGTCAATTTTTGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: MSVAIKITQHERAYLCFQRARNV*SIFAWT
Trigger: TGTCCAGGCAAAAATTGACAATACATTTCTTGCCCG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
3UTR CCA 72 bp CATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCTATAAAGATAACACAG +
Preference number: 3 (lower is better)
Translates to: HHSPVCKLTVPS*LRMSVAIKITQ
Trigger: CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
3UTR TCA 72 bp AGTAACTGCAGCTTTTTCTCTCTAGAATCTAAGGGCTaGGAAGAGAGAATTTTAAATGTGGAGGAGATGTTA +
Preference number: 3 (lower is better)
Translates to: SNCSFFSLESKG*EERILNVEEML
Trigger: TAACATCTCCTCCACATTTAAAATTCTCTCTTCTCAGCCCTTAGATTCTAGAGAGAAAAAGCTGCAGTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR TCA 72 bp ATTACACATAATTACTCACCCAGAAAGAGCCAACTATaGGCTATCCATGGAAATGAAGAAATAACACAGCAA +
Preference number: 3 (lower is better)
Translates to: ITHNYSPRKSQL*AIHGNEEITQQ
Trigger: TTGCTGTGTTATTTCTTCATTTCCATGGATAGCTCATAGTTGGCTCTTTCTGGGTGAGTAATTATGTGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTTGCAGGAGTTCGTGTaGGGGGTGTGCGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDLQEFV*GVCALR
Trigger: CCTCAGGGCGCACACCCCTCACACGAACTCCTGCAA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCGTTGGTCAGCCGGGTaGTCTCGTGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPERWSAG*SRAAGW
Trigger: CCAGCCTGCAGCACGAGATCACCCGGCTGACCAACG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTGCTGCGGAGCACCTaGTCCTCCTTGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPELLRST*SSLRSS
Trigger: GCTGGACCGCAAGGAGGAGCAGGTGCTCCGCAGCAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGTAGGCAGGTGCACCTaGGGCGGTCACCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGVGRCT*GGHLWG
Trigger: GCCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTAC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCCTCCTTCAGGCTCTaGATCTCCCCACGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPESSFRL*ISPRRA
Trigger: GGCCCTCCGTGGGGAGATCCAGAGCCTGAAGGAGGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCGTTGGTCAGCCGGGTaGTCTCGTGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASRWSAG*SRAAGW
Trigger: CCAGCCTGCAGCACGAGATCACCCGGCTGACCAACG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPESRVIS*CRLASM
Trigger: CATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTGCAGGAGTTCGTGTaGGGGGTGTGCGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLQEFV*GVCALR
Trigger: CCTCAGGGCGCACACCCCTCACACGAACTCCTGCAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTGGTAAGTCCACCGTaGGGGGAAACCGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLVSPP*GETGRT
Trigger: AGTGCGGCCGGTTTCCCCTCACGGTGGACTTACCAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGGAGATTTCCAGGGCTaGGGCGGACAGCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVGDFQG*GGQPVP
Trigger: TGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGGGGCAACTGAGGACTaGCTCCATCCACCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVGATED*LHPPAF
Trigger: GAAGGCAGGTGGATGGAGTCAGTCCTCAGTTGCCCC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCACCTGCTCCTCCTTaGGGTCCAGCTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVAPAPP*GPAHPA
Trigger: TGCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACGGGTGATCTCGTGCTaGAGGCTGGCCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRVISC*RLASMR
Trigger: CCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAGGCCTGTCCAGGCTaGACAGCTCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQACPG*TAHLVA
Trigger: AGCCACCAGGTGAGCTGTGCAGCCTGGACAGGCCTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVGNRPH*FGWFPG
Trigger: TCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGGTCAGCTGCTCCATaGGGACACGGTAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASRSAAP*GHGRQV
Trigger: CACCTGCCTACCGTGTCCTCATGGAGCAGCTGACCT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGACCCCAGACACGCCCTaGATCGTTTCATGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPETPDTP*IVSCSS
Trigger: GCTGGAACATGAAACGATTCAGGGCGTGTCTGGGGT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGGAGATTTCCAGGGCTaGGGCGGACAGCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASGDFQG*GGQPVP
Trigger: TGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACGGGCATTCGTGGCCTaGAGCTTGGAGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRAFVA*SLEMGL
Trigger: CAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCCTTTGGTGGGCTTTaGAGGAGTTCGTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVAFGGL*RSSCEG
Trigger: CCCCTCACACGAACTCCTGCAAAGCCCACCAAAGGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACCATGCTCTCAGCTGCTaGACTGCCCTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDHALSC*TALFSS
Trigger: TGATGAGAAGAGGGCAGTGCAGCAGCTGAGAGCATG...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAGTCCAGTGTGTAGGTaGCCTCATCGGCGATACTGG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPESPVCR*PHRRYW
Trigger: CCAGTATCGCCGATGAGGGCACCTACACACTGGACT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTGGAAGGAGTTGAGCTaGCGGAGGATGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEWKELS*RRMESS
Trigger: ACTGGACTCCATCCTCCGGCAGCTCAACTCCTTCCA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACCCTTTTCCTCCACATTaGCCTCACTGGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDPFPPH*PHWQNH
Trigger: GTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGG...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCATCGCGGGCATTCGTaGCCTGCAGCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASHRGHS*PAAWRW
Trigger: CCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCCTCGGATGGTCTTCTaGATCCGGATGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVPRMVF*IRMQAA
Trigger: AGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASAATLG*SSGSGC
Trigger: GCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTGGGGCGGTCACCTCTaGGGCACTTTTCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVWGGHL*GTFLTE
Trigger: CTCAGTGAGAAAAGTGCCCCAGAGGTGACCGCCCCA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGTAGGCAGGTGCACCTaGGGCGGTCACCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYVGRCT*GGHLWG
Trigger: GCCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTAC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGACCTGGGAGGAAGCTaGAGCCCTGGAATAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEDLGGS*SPGIAE
Trigger: TTCTGCTATTCCAGGGCTCCAGCTTCCTCCCAGGTC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGGACACGGTAGCGGCTaGAAAATTCTTGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDGHGSG*KILGKS
Trigger: GGACTTACCAAGAATTTTTCAGCCGCTACCGTGTCC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRISAW*WLPSAC
Trigger: GCATGCGGAAGGCAGCCATCACCATGCAGAGATACG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGGGTCCATGCCATGCTaGCACATGACCGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGGSMPC*HMTEWK
Trigger: CTTCCACTCGGTCATGTGTCAGCATGGCATGGACCC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCTGGCTCCAGCACTTaGCAGGACAAAGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPESGSST*QDKDRR
Trigger: TCTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCCCCGCACGTATCTCTaGATGGTGATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASPRTYL*MVMAAF
Trigger: GAAGGCAGCCATCACCATGCAGAGATACGTGCGGGG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATCACCTGCTTCTCCTaGTCCAGCTCTGTGACCCGC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGITCFS*SSSVTR
Trigger: GCGGGTCACAGAGCTGGAGCAGGAGAAGCAGGTGAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCTTCTTCCTTGGCCTTaGTGCGGAGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLLPWP*CGAPAP
Trigger: AGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGACTTGTATATGGCCTaGCCAGTGACAGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVDLYMA*PVTALG
Trigger: TCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCCACATTGGCCTCACTaGCAGAACCACTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEPHWPH*QNHSQL
Trigger: CAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGGCCTGGTCTGCCTTTaGTGGGCTTTGCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGGLVCL*WALQEF
Trigger: GAACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGTCTTTCTTCTTCCTTaGCCTTGCTGCGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEVFLLP*PCCGAP
Trigger: AGGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGAC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGCTTTCTCAACCCTGTaGGCTTCACCCCAGACACGC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASAFSTL*ASPQTR
Trigger: GCGTGTCTGGGGTGAAGCCCACAGGGTTGAGAAAGC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGCATCCATGAGCAGCTaGGGAGAGTCTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEASMSS*GESFLS
Trigger: AGACAGGAAAGACTCTCCCCAGCTGCTCATGGATGC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGCCCAGGCCGAGGCTaGCTGGAATCTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSPGRG*LESGWF
Trigger: AAACCATCCAGATTCCAGCCAGCCTCGGCCTGGGCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTCTGTGACTGCAGCTaGGATTCCAGGAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEFCDCS*DSRSLL
Trigger: CAACAGGCTCCTGGAATCCCAGCTGCAGTCACAGAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCTTGGTAAGTCCACCGTaGGGGGAAACCGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLLVSPP*GETGRT
Trigger: AGTGCGGCCGGTTTCCCCTCACGGTGGACTTACCAA...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACCCCGGACTCGCTTCTaGATGATGACTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGPRTRF*MMTALC
Trigger: GCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGAGCACTGAAGGTAGATaGTGGCATGCATGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTESTEGR*WHACSS
Trigger: AGAGGAGCATGCATGCCATCATCTACCTTCAGTGCT...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAGAACACTGTACCCTaGCGCAATATCCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQNTVP*RNIHPG
Trigger: CCCTGGGTGGATATTGCGTCAGGGTACAGTGTTCTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATTCAGGGTGCACGTTaGGTCGTGCTACACAGGATG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVIQGAR*VVLHRM
Trigger: CATCCTGTGTAGCACGACTCAACGTGCACCCTGAAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGCCAGCAGGGGCAACTaGGGACTGACTCCATCCACC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYASRGN*GLTPST
Trigger: GGTGGATGGAGTCAGTCCTCAGTTGCCCCTGCTGGC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCCTCCCAGAGAGCACTaGTTCATGACAGAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEPPREH*FMTEVK
Trigger: CTTGACTTCTGTCATGAATCAGTGCTCTCTGGGAGG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGCGGGCATTCGTGGCCTaGAGCTTGGAGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVRAFVA*SLEMGL
Trigger: CAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCG...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCATGCTCTCAGCTGCTaGACTGCCCTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVHALSC*TALFSS
Trigger: TGATGAGAAGAGGGCAGTGCAGCAGCTGAGAGCATG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTCCTCTTGTAGTGTGTaGGGGCCAGCCAGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSSCSV*GPASPG
Trigger: TCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPELAISS*RLRTRP
Trigger: TGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGATTCAGACTCGTTGCTaGTGTGGGTGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEIQTRC*CGWSLF
Trigger: GAACAGACTCCACCCACAGCAGCAACGAGTCTGAAT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGTCCAGTGTGTAGGTaGCCTCATCGGCGATACTGG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSPVCR*PHRRYW
Trigger: CCAGTATCGCCGATGAGGGCACCTACACACTGGACT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGGAAGGAGTTGAGCTaGCGGAGGATGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGWKELS*RRMESS
Trigger: ACTGGACTCCATCCTCCGGCAGCTCAACTCCTTCCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGCCCACACCACCACTaGTCCATATGGGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASCPHHH*SIWESR
Trigger: CCTGCTTTCCCATATGGAGCAGTGGTGGTGTGGGCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTGGTACGCAGCACTTaGTCGGTTCCCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLVRST*SVPTCQ
Trigger: CTGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGACTTGTATATGGCCTaGCCAGTGACAGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASDLYMA*PVTALG
Trigger: TCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTTGGCCATTTGGCCTaGTCTGCCTTTGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVFGHLA*SAFGGL
Trigger: AAGCCCACCAAAGGCAGACCAGGCCAAATGGCCAAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAGGCTGGCTGGAATCTaGATGGTTTCTAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVRLAGI*MVSSAR
Trigger: CCTCGCACTAGAAACCATCCAGATTCCAGCCAGCCT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCCTAAACTGGGAAGGTaGCCTATAGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASPKLGR*PIAAGL
Trigger: CAGGCCTGCAGCTATAGGCCACCTTCCCAGTTTAGG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGCTTGGAGATGGGCTTaGTGTATGTCTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASAWRWA*CMSLWQ
Trigger: CTGCCACAGAGACATACATCAAGCCCATCTCCAAGC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGCGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPRISAW*WLPSAC
Trigger: GCATGCGGAAGGCAGCCATCACCATGCAGAGATACG...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCACGATGCGGTGATTaGGGGCTTCTTTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVARCGD*GLLFLA
Trigger: AGCAAGAAAAAGAAGCCCTCAATCACCGCATCGTGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTCAGACCCGTGAAATaGAGCCCAGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYFRPVK*SPGRGW
Trigger: CCAGCCTCGGCCTGGGCTTCATTTCACGGGTCTGAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTGTGCCACCATCGCTaGACAGGAGAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLCHHR*TGETTK
Trigger: CTTGGTGGTTTCTCCTGTTCAGCGATGGTGGCACAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAGAAAGGGCATTGTGTaGGGACTTCTCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVRKGIV*GLLRMV
Trigger: CACCATCCTGAGAAGTCCTCACACAATGCCCTTTCT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCCTCCCAGAGAGCACTaGTTCATGACAGAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVPPREH*FMTEVK
Trigger: CTTGACTTCTGTCATGAATCAGTGCTCTCTGGGAGG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCCTCACAGCACAGCCTaGGAACAAATTACAATGCAC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEPHSTA*EQITMH
Trigger: GTGCATTGTAATTTGTTCTCAGGCTGTGCTGTGAGG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGTTTCTCTCCTCTTCTaGCTGGAATACCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEVSLLF*LEYHSG
Trigger: TCCAGAGTGGTATTCCAGGCAGAAGAGGAGAGAAAC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCGGCCTGCCTAGTATGTaGCATCTCCTTTGCATCATC +
Preference number: 4 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALGLPSM*HLLCII
Trigger: GATGATGCAAAGGAGATGGCACATACTAGGCAGGCC...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTATTGTGCAGCTGTCTaGATCTCGGGATGTAAATCC +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDYCAAV*ISGCKS
Trigger: GGATTTACATCCCGAGATGCAGACAGCTGCACAATA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCGGGCATTCGTGGCCTaGAGCTTGGAGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYRAFVA*SLEMGL
Trigger: CAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCTCTCAGCTGCTGCACTaGCCTCTTCTCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALSQLLH*PLLIKR
Trigger: ACGTTTGATGAGAAGAGGGCAGTGCAGCAGCTGAGA...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCTCCTCTTGTAGTGTGTaGGGGCCAGCCAGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCSSCSV*GPASPG
Trigger: TCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGA...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTCATCAACTTTGCGCTaGAGCTGCATGATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDSSTLR*SCMILF
Trigger: GAACAAGATCATGCAGCTGCAGCGCAAAGTTGATGA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLAISS*RLRTRP
Trigger: TGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTATATTCAGACTCGTTaGTGCTGTGGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEYIQTR*CCGWSL
Trigger: CAGACTCCACCCACAGCAGCAACGAGTCTGAATATA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTCATCCTGCATCACCTaGTTCTCCTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSSCIT*FSCSSS
Trigger: AGAGCTGGAGCAGGAGAAGCAGGTGATGCAGGATGA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTGCTGCGGAGCACCTaGTCCTCCTTGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLLRST*SSLRSS
Trigger: GCTGGACCGCAAGGAGGAGCAGGTGCTCCGCAGCAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCGGGTGATCTCGTGCTaGAGGCTGGCCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRVISC*RLASMR
Trigger: CCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEEEVLW*LPNNSS
Trigger: TGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCCACCTGCCTTCAGTaGACAGTCAAACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSTCLQ*TVKQQA
Trigger: TGCCTGCTGTTTGACTGTGCACTGAAGGCAGGTGGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCTGACTCCATCCACCTaGCTTCAGTGCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLTPST*LQCTVK
Trigger: TTTGACTGTGCACTGAAGGCAGGTGGATGGAGTCAG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTCCTGCATCACAGGTaGCCACACCACCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLLHHR*PHHHCS
Trigger: GGAGCAGTGGTGGTGTGGGCACCTGTGATGCAGGAG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCCACATTGGCCTCACTaGCAGAACCACTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASPHWPH*QNHSQL
Trigger: CAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCCTTTTCCTCCACATTaGCCTCACTGGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASPFPPH*PHWQNH
Trigger: GTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCTGTGACCCGCTTCTaGAGCTTAAGGAACAATGAC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPESVTRF*SLRNND
Trigger: GTCATTGTTCCTTAAGCTCCAGAAGCGGGTCACAGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCATCCTTGGGTTGGATaGCCTCTTTCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASHPWVG*PLSGSP
Trigger: TGGTGAGCCAGAAAGAGGCCATCCAACCCAAGGATG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGCATCCATGAGCAGCTaGGGAGAGTCTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGASMSS*GESFLS
Trigger: AGACAGGAAAGACTCTCCCCAGCTGCTCATGGATGC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTGGCTGGAATCTGGATaGTTTCTAGTGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVWLESG*FLVRGK
Trigger: CTTCCCTCGCACTAGAAACCATCCAGATTCCAGCCA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGGCCTTGGGGTTCCCTaGTTACAAGGTATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVGLGVP*LQGILV
Trigger: GACAAGAATACCTTGTAACCAGGGAACCCCAAGGCC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGGACTGTGCAAAGATTaGGCTGATGGTAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVGLCKD*ADGKHQ
Trigger: CTGGTGCTTACCATCAGCCCAATCTTTGCACAGTCC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGCAGGAAAGCATATCTaGACCCAGGTACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEAGKHI*TQVLFL
Trigger: CAGAAACAGTACCTGGGTCCAGATATGCTTTCCTGC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACACCACTGCTCCATATaGGAAAGCAGGACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGHHCSI*ESRTAR
Trigger: TCTGGCTGTCCTGCTTTCCCATATGGAGCAGTGGTG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTCTGTGACTGCAGCTaGGATTCCAGGAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGFCDCS*DSRSLL
Trigger: CAACAGGCTCCTGGAATCCCAGCTGCAGTCACAGAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp TTGGCCAAAGCATCGCGGGCATTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LAKASRAFVACS*EMGLMYVSVAV
Trigger: TACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATGCTTTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
3UTR CAA 72 bp TTCTTGTGCTCTTTGGCCATTTGGCCTGGTCTGCCTTaGGTGGGCTTTGCAGGAGTTCGTGTGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLCSLAIWPGLP*VGFAGVRVRGV
Trigger: CACACCCCTCACACGAACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTTCCTTCCTCGAGGTaGAGCAGGAGGACTTTATCT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVFPSSR*SRRTLS
Trigger: AGATAAAGTCCTCCTGCTTCACCTCGAGGAAGGAAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGCAGAATGGAGAGCCTaGTTGACATTATCTACAATC +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDAEWRA*LTLSTI
Trigger: GATTGTAGATAATGTCAATCAGGCTCTCCATTCTGC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTGGCTGAAGTTGGACTaGTGGCCTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVWLKLD*WPSHHL
Trigger: AAGATGATGAGAAGGCCATCAGTCCAACTTCAGCCA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGCGAGCCTCGATTTTaGGCTTCTTTAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSEPRF*ASLAHA
Trigger: AGCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGCACGATGCGGTGATTaGGGGCTTCTTTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGARCGD*GLLFLA
Trigger: AGCAAGAAAAAGAAGCCCTCAATCACCGCATCGTGC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGCTGCACGATGCGGTaGTTGAGGGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASCCTMR*LRASFS
Trigger: AGAAAAAGAAGCCCTCAATCACCGCATCGTGCAGCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGGAGATTTCCAGGGCTaGGGCGGACAGCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCGDFQG*GGQPVP
Trigger: TGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCTCC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCAAGTTGTAAGGGTGTaGGGTGAGTCTGCATGTAGT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVQVVRV*GESACS
Trigger: ACTACATGCAGACTCACCTCACACCCTTACAACTTG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAAACCACCTGGCGCTaGGCACTTGGTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGKTTWR*ALGLLK
Trigger: TTTAAGGAGACCAAGTGCTCAGCGCCAGGTGGTTTT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACACTTCCCAAAACGGCTaGTATTATCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDTSQNG*YYHSWL
Trigger: CAACCAGGAATGATAATAGCAGCCGTTTTGGGAAGT...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGGCCTGCCTAGTATGTaGCATCTCCTTTGCATCATC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGGLPSM*HLLCII
Trigger: GATGATGCAAAGGAGATGGCACATACTAGGCAGGCC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCTCAGCTGCTGCACTaGCCTCTTCTCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSQLLH*PLLIKR
Trigger: ACGTTTGATGAGAAGAGGGCAGTGCAGCAGCTGAGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTCTCTGAACGAGTTTaGTCCAGGTCTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASFSERV*SRSFRS
Trigger: GCTCCGGAAAGACCTGGAGCAAACTCGTTCAGAGAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTATATTCAGACTCGTTaGTGCTGTGGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVYIQTR*CCGWSL
Trigger: CAGACTCCACCCACAGCAGCAACGAGTCTGAATATA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCGGTCCAGCTCATCCTaGATCACCTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYRSSSS*ITCFSC
Trigger: GCAGGAGAAGCAGGTGATGCAGGATGAGCTGGACCG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACTGACTCCATCCACCTaGCTTCAGTGCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLTPST*LQCTVK
Trigger: TTTGACTGTGCACTGAAGGCAGGTGGATGGAGTCAG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGATTTTTAAAGTCTCCTaGATCACAGGTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEIFKVS*ITGAHT
Trigger: GGTGTGGGCACCTGTGATGCAGGAGACTTTAAAAAT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAGTGAGGCAGCTCCTTaGTCTTTGGATCTAGATGGT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVSEAAP*SLDLDG
Trigger: ACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCATCGCGGGCATTCGTaGCCTGCAGCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCHRGHS*PAAWRW
Trigger: CCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGGCCTGGTCTGCCTTTaGTGGGCTTTGCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYGLVCL*WALQEF
Trigger: GAACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGGCTGGAATCTGGATaGTTTCTAGTGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGWLESG*FLVRGK
Trigger: CTTCCCTCGCACTAGAAACCATCCAGATTCCAGCCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCATTTACTGGGCCTTaGGGTTCCCTGGTTACAAGG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSFTGP*GSLVTR
Trigger: CCTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTACAGAATCATTTACTaGGCCTTGGGGTTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVYRIIY*ALGFPG
Trigger: ACCAGGGAACCCCAAGGCCCAGTAAATGATTCTGTA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCAGGAAAGCATATCTaGACCCAGGTACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVAGKHI*TQVLFL
Trigger: CAGAAACAGTACCTGGGTCCAGATATGCTTTCCTGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAAGCATTCTCTAAGCTaGCCTCTCACTGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASKHSLS*PLTGSE
Trigger: CTCAGAGCCAGTGAGAGGCCAGCTTAGAGAATGCTT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCAGGATTTCGTAAGTaGGGCAGCTCCTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSGFRK*GSSLVF
Trigger: AAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGCAGAATGGAGAGCCTaGTTGACATTATCTACAATC +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEAEWRA*LTLSTI
Trigger: GATTGTAGATAATGTCAATCAGGCTCTCCATTCTGC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGGCTGAAGTTGGACTaGTGGCCTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASWLKLD*WPSHHL
Trigger: AAGATGATGAGAAGGCCATCAGTCCAACTTCAGCCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGCCAGTACTTTTGAATaGTGGTTGCTGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGASTFE*WLLPWF
Trigger: GAACCAAGGCAGCAACCATCATTCAAAAGTACTGGC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCCCCGGACTCGCTTCTaGATGATGACTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYPRTRF*MMTALC
Trigger: GCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGCTTATAGCGCTCCACTaGGCGAGCCTCGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVLIALH*ASLDFE
Trigger: CTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAG...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGAGCTTAAGGAACAATaGCATGTCCAGAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVELKEQ*HVQRYL
Trigger: AAGGTACCTCTGGACATGTCATTGTTCCTTAAGCTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGGGCACTTTTCTCACTaGGGGCCTTGCGCAACTCAT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYGHFSH*GPCATH
Trigger: ATGAGTTGCGCAAGGCCCTCAGTGAGAAAAGTGCCC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGGATGGGTTCATCAATaGTCTGTCCTGGGGATATGT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASGWVHQ*SVLGIC
Trigger: ACATATCCCCAGGACAGATCATTGATGAACCCATCC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGGATGGGTTCATCAATaGTCTGTCCTGGGGATATGT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGGWVHQ*SVLGIC
Trigger: ACATATCCCCAGGACAGATCATTGATGAACCCATCC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATCCTGGAATCAAATTaGCTGCTACACCACGTGGCT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGILESN*LLHHVA
Trigger: AGCCACGTGGTGTAGCAGTCAATTTGATTCCAGGAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTATCCTGGAATCAAATTaGCTGCTACACCACGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASILESN*LLHHVA
Trigger: AGCCACGTGGTGTAGCAGTCAATTTGATTCCAGGAT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCAGAACACTGTACCCTaGCGCAATATCCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYQNTVP*RNIHPG
Trigger: CCCTGGGTGGATATTGCGTCAGGGTACAGTGTTCTG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGATAGACGATTAAGTTaGGGGAAGGGGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVDRRLS*GKGKSE
Trigger: TTCACTCTTCCCCTTCCCTCAACTTAATCGTCTATC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAAGTTGTAAGGGTGTaGGGTGAGTCTGCATGTAGT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQVVRV*GESACS
Trigger: ACTACATGCAGACTCACCTCACACCCTTACAACTTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGATCAAAGCCTTAACCTaGGGAAAAGCTGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEIKALT*GKAAKR
Trigger: CCTTTTTGCAGCTTTTCCTCAGGTTAAGGCTTTGAT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAATGCACTCATCCATaGACAGAGGTCACGGCAATA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQCTHP*TEVTAI
Trigger: TATTGCCGTGACCTCTGTTCATGGATGAGTGCATTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGATGTGCCATCTCCTTTaGATCATCCACTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEMCHLL*IIHSFN
Trigger: ATTGAAGGAGTGGATGATGCAAAGGAGATGGCACAT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTGCCTAAGTGAAGGATaGCAGCAAGTATTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPECLSEG*QQVFGK
Trigger: TTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTGCCTAAGTGAAGGATaGCAGCAAGTATTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTECLSEG*QQVFGK
Trigger: TTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCGCCTTTGGTGGGCTTTaGAGGAGTTCGTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCAFGGL*RSSCEG
Trigger: CCCCTCACACGAACTCCTGCAAAGCCCACCAAAGGC...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCCCCGCACGTATCTCTaGATGGTGATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCPRTYL*MVMAAF
Trigger: GAAGGCAGCCATCACCATGCAGAGATACGTGCGGGG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTAT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPELLNDD*FVLTEY
Trigger: ATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTELLNDD*FVLTEY
Trigger: ATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCGGTCCAGCTCATCCTaGATCACCTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRSSSS*ITCFSC
Trigger: GCAGGAGAAGCAGGTGATGCAGGATGAGCTGGACCG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAGCCTGTACCACGTTaGATTTTCTTAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQPVPR*IFLATP
Trigger: GGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATTTTTAAAGTCTCCTaGATCACAGGTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVIFKVS*ITGAHT
Trigger: GGTGTGGGCACCTGTGATGCAGGAGACTTTAAAAAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAAGGTGGCCTATAGCTaGAGGCCTGTCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCKVAYS*RPVQAA
Trigger: TGCAGCCTGGACAGGCCTGCAGCTATAGGCCACCTT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCAGGTATCCAAACCCTaGCAAACTTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVQVSKP*QTLCRA
Trigger: AGCTCTACACAAAGTTTGCCAGGGTTTGGATACCTG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGATTTCGTTCATCTCTaGCCATTTGCTTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDDFVHL*PFACKL
Trigger: AAGCTTACAAGCAAATGGCCAGAGATGAACGAAATC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCTCTCCTCTTCTGCCTaGAATACCACTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLSSSA*NTTLDF
Trigger: GAAATCCAGAGTGGTATTCCAGGCAGAAGAGGAGAG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCGGCCTGGTCTGCCTTTaGTGGGCTTTGCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCGLVCL*WALQEF
Trigger: GAACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCC...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGTGCTCTTTGGCCATTTaGCCTGGTCTGCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPCSLAI*PGLPLV
Trigger: CACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCA...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTATTCTTGTCATCCTTaGGTTGGATGGCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEYSCHP*VGWPLS
Trigger: AGAAAGAGGCCATCCAACCCAAGGATGACAAGAATA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACCTGGGAATGTTGACTaGTCGGATGGGTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGPGNVD*SDGFIN
Trigger: ATTGATGAACCCATCCGACCAGTCAACATTCCCAGG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGGCAGTGTTCATTCTaGCGAGATGTGTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASRQCSF*RDVLCF
Trigger: GAAGCACAACACATCTCGCCAGAATGAACACTGCCT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGGCAGTGTTCATTCTaGCGAGATGTGTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRQCSF*RDVLCF
Trigger: GAAGCACAACACATCTCGCCAGAATGAACACTGCCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGCTTTCTCAACCCTGTaGGCTTCACCCCAGACACGC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCAFSTL*ASPQTR
Trigger: GCGTGTCTGGGGTGAAGCCCACAGGGTTGAGAAAGC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTACAGAATCATTTACTaGGCCTTGGGGTTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASYRIIY*ALGFPG
Trigger: ACCAGGGAACCCCAAGGCCCAGTAAATGATTCTGTA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCCTAAACTGGGAAGGTaGCCTATAGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYPKLGR*PIAAGL
Trigger: CAGGCCTGCAGCTATAGGCCACCTTCCCAGTTTAGG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp ATGATGGGGTTGGAGGCCAAGACCTTTTCCTCCACATaGGCCTCACTGGCAGAACCACTCACAGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: MMGLEAKTFSST*ASLAEPLTVAK
Trigger: CTTTGCAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGTCTTGGCCTCCAACCCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASPTLPK*RMPASI
Trigger: AATACTTGCTGGCATCCTTCACTTAGGCAATGTTGG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCAGAATGGAGAGCCTaGTTGACATTATCTACAATC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVAEWRA*LTLSTI
Trigger: GATTGTAGATAATGTCAATCAGGCTCTCCATTCTGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALAFSSS*NSSGSI
Trigger: GATGCTACCAGAACTATTTCAAGATGATGAGAAGGC...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCCCCGGACTCGCTTCTaGATGATGACTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCPRTRF*MMTALC
Trigger: GCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCCCCCGGACTCGCTTCTaGATGATGACTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCPRTRF*MMTALC
Trigger: GCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGG...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGGTTCCTCTGTCCTTaGTGGAATGTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGWFLCP*WNVFHF
Trigger: GAAATGGAAGACATTCCATCAAGGACAGAGGAACCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCATGTCGAACACACATaGACAGGATATATGCCGGTA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASHVEHT*TGYMPV
Trigger: TACCGGCATATATCCTGTTCATGTGTGTTCGACATG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACATGTCGAACACACATaGACAGGATATATGCCGGTA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGHVEHT*TGYMPV
Trigger: TACCGGCATATATCCTGTTCATGTGTGTTCGACATG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATATTCAGGGTGCACGTTaGGTCGTGCTACACAGGATG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYIQGAR*VVLHRM
Trigger: CATCCTGTGTAGCACGACTCAACGTGCACCCTGAAT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTGTGCTTCTGCACCTaGCAAAAGAAGCATCAGATA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLCFCT*QKKHQI
Trigger: TATCTGATGCTTCTTTTGTCAGGTGCAGAAGCACAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTATCACTAAGCAGCTaGCATTACCCAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLSLSS*HYPEDP
Trigger: AGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTATCACTAAGCAGCTaGCATTACCCAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLSLSS*HYPEDP
Trigger: AGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATATTGTGCAGCTGTCTaGATCTCGGGATGTAAATCC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGYCAAV*ISGCKS
Trigger: GGATTTACATCCCGAGATGCAGACAGCTGCACAATA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGACATTCTTGCATGTTTaGTTTCTGTCACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPETFLHV*FLSLST
Trigger: TGTGCTGAGTGACAGAAAGCAAACATGCAAGAATGT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCTCTTCTGGATCCGGATaGAGGCAGCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLSSGSG*RQLSVC
Trigger: ACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGA...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTATGATGACTGCTTTGTaGTCACGGAGTATCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASMMTAL*SRSILR
Trigger: TCGCAAGATACTCCGTGAGCACAAAGCAGTCATCAT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTCCTCTTGTAGTGTGTaGGGGCCAGCCAGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSSCSV*GPASPG
Trigger: TCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTTCTCTGAACGAGTTTaGTCCAGGTCTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFFSERV*SRSFRS
Trigger: GCTCCGGAAAGACCTGGAGCAAACTCGTTCAGAGAA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGACACGGTAGGCAGGTaGACCTGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLDTVGR*TWGGHL
Trigger: GAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAAGTCACTCAGCACCTaGCGATACTCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYKSLST*RYSARS
Trigger: TGACCTGGCTGAGTATCGGCAGGTGCTGAGTGACTT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGAACAACAAGGACTGTaGAAAGATTGGGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASEQQGL*KDWADG
Trigger: ACCATCAGCCCAATCTTTGCACAGTCCTTGTTGTTC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCACAGCCAGAGGGCTGTaGGACATCAGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCTARGL*DIRQVT
Trigger: AGTGACTTGCCTGATGTCGCACAGCCCTCTGGCTGT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTGCTCGGTTCCCACATaGCAGCTGCCAACTCTGATA +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYCSVPT*QLPTLI
Trigger: TATCAGAGTTGGCAGCTGGCATGTGGGAACCGAGCA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCAGGCCTGTCCAGGCTaGACAGCTCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDQACPG*TAHLVA
Trigger: AGCCACCAGGTGAGCTGTGCAGCCTGGACAGGCCTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGAGGACTTTATCTCCTaGCTTATAATCTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEEDFIS*LIIFEQ
Trigger: CTGCTCAAAGATTATAAGCCAGGAGATAAAGTCCTC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGGAGGACTTTATCTCCTaGCTTATAATCTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEEDFIS*LIIFEQ
Trigger: CTGCTCAAAGATTATAAGCCAGGAGATAAAGTCCTC...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTACTGCAAAGATATGTaGATCCATATCACCCATGTT +
Preference number: 4 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDYCKDM*IHITHV
Trigger: AACATGGGTGATATGGATCCACATATCTTTGCAGTA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCCACATTGGCCTCACTaGCAGAACCACTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYPHWPH*QNHSQL
Trigger: CAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCCTTTTCCTCCACATTaGCCTCACTGGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYPFPPH*PHWQNH
Trigger: GTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGACTCGTTGCTGCTGTaGGTGGAGTCTGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYDSLLL*VESVLL
Trigger: CAAGAGAACAGACTCCACCCACAGCAGCAACGAGTC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATCAATGATCTGTCCTaGGGATATGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVINDLS*GYVLHL
Trigger: CAGATGGAGAACATATCCCCAGGACAGATCATTGAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCCTTACGATGATGGACTaGTTTCGTTCATCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLLTMMD*FRSSLA
Trigger: GGCCAGAGATGAACGAAATCAGTCCATCATCGTAAG...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGCAGAATGGAGAGCCTaGTTGACATTATCTACAATC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGAEWRA*LTLSTI
Trigger: GATTGTAGATAATGTCAATCAGGCTCTCCATTCTGC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTGCAGGAGTTCGTGTaGGGGGTGTGCGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLQEFV*GVCALR
Trigger: CCTCAGGGCGCACACCCCTCACACGAACTCCTGCAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCATGCGCCAGTACTTTTaGATGATGGTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLMRQYF*MMVAAL
Trigger: CAAGGCAGCAACCATCATTCAAAAGTACTGGCGCAT...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAGCACTGAAGGTAGATaGTGGCATGCATGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSTEGR*WHACSS
Trigger: AGAGGAGCATGCATGCCATCATCTACCTTCAGTGCT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCTTATAGCGCTCCACTaGGCGAGCCTCGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLIALH*ASLDFE
Trigger: CTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTCTTCCTTCAGATTTaGTACCAGCTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASFFLQI*YQLLCF
Trigger: GAAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTCTTCCTTCAGATTTaGTACCAGCTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGFFLQI*YQLLCF
Trigger: GAAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCCGAGTGGAAGGAGTTaGGCTGCCGGAGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDPSGRS*AAGGWS
Trigger: ACTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGCTACTTGTGCAGGTaGATCTGTAGGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGCYLCR*ICRYLH
Trigger: ATGCAAATACCTACAGATTCACCTGCACAAGTAGCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCATTCAGGGTGCACGTTaGGTCGTGCTACACAGGATG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCIQGAR*VVLHRM
Trigger: CATCCTGTGTAGCACGACTCAACGTGCACCCTGAAT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTGTGCCACCATCGCTaGACAGGAGAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLCHHR*TGETTK
Trigger: CTTGGTGGTTTCTCCTGTTCAGCGATGGTGGCACAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAGGTATTCTTGTCAATaGCTAAAAATCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVRYSCQ*LKISRP
Trigger: TGGCCTGGAGATTTTTAGTCATTGACAAGAATACCT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGTGTCTGAAGTTGGGTaGGAAAGTGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYVSEVG*ESVADR
Trigger: TCTGTCAGCCACACTTTCTCACCCAACTTCAGACAC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAGAAAGGGCATTGTGTaGGGACTTCTCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYRKGIV*GLLRMV
Trigger: CACCATCCTGAGAAGTCCTCACACAATGCCCTTTCT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAAAACCACCTGGCGCTaGGCACTTGGTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYKTTWR*ALGLLK
Trigger: TTTAAGGAGACCAAGTGCTCAGCGCCAGGTGGTTTT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATATGGCCTGCCCAGTaGCAGCCCTCGGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLIWPAQ*QPSEGT
Trigger: GGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCATTTGCTTACTTGTaGCACAGAGTCCCACTAACT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSFAYL*HRVPLT
Trigger: AGTTAGTGGGACTCTGTGTCACAAGTAAGCAAATGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAAGGGAAATCCGATATaGTTGATACTTCTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVKGNPI*LILLRV
Trigger: GACCCTAAGAAGTATCAATCATATCGGATTTCCCTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGAACCACTCACAGTTaGAAAGTATCGCATGGCATA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASRTTHS*KVSHGI
Trigger: TATGCCATGCGATACTTTGCAACTGTGAGTGGTTCT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTACTTCCCAAAACGGCTaGTATTATCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASTSQNG*YYHSWL
Trigger: CAACCAGGAATGATAATAGCAGCCGTTTTGGGAAGT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAACTTCCCAAAACGGCTaGTATTATCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGTSQNG*YYHSWL
Trigger: CAACCAGGAATGATAATAGCAGCCGTTTTGGGAAGT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCGTTTCTCTCCTCTTCTaGCTGGAATACCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLVSLLF*LEYHSG
Trigger: TCCAGAGTGGTATTCCAGGCAGAAGAGGAGAGAAAC...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATGTGCCATCTCCTTTaGATCATCCACTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGMCHLL*IIHSFN
Trigger: ATTGAAGGAGTGGATGATGCAAAGGAGATGGCACAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGACACCAATAAAAGAGTaGTGTTTGACAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVTPIKE*CLTAEW
Trigger: CCATTCTGCTGTCAAACAGCACTCTTTTATTGGTGT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGACATTCTTGCATGTTTaGTTTCTGTCACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVTFLHV*FLSLST
Trigger: TGTGCTGAGTGACAGAAAGCAAACATGCAAGAATGT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTCTCTAACACATTCTTaGATGTTTGCTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTESLTHS*MFAFCH
Trigger: GTGACAGAAAGCAAACATGCAAGAATGTGTTAGAGA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTAT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLLNDD*FVLTEY
Trigger: ATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCCTCTTGTAGTGTGTaGGGGCCAGCCAGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSSCSV*GPASPG
Trigger: TCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGCTGCGGAGCACCTaGTCCTCCTTGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLLRST*SSLRSS
Trigger: GCTGGACCGCAAGGAGGAGCAGGTGCTCCGCAGCAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCTTCCTTGGCCTTGCTaGGGAGCACCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLPWPC*GAPAPP
Trigger: AGGAGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTGGGCCAGCAGCTGCTaGTGTCGGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDWASSC*CRLFSS
Trigger: GGAGGAGAACAACCGACAGCAGCAGCTGCTGGCCCA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCGGGTGATCTCGTGCTaGAGGCTGGCCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMRVISC*RLASMR
Trigger: CCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTTCATGTTCCAGCATaGCTGAGACAATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGFHVPA*LRQSLA
Trigger: AGCCAATGATTGTCTCAGGCATGCTGGAACATGAAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTGGTTGAGACAACCTaGTACCAATTAATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLVETT*YQLMPK
Trigger: TTTGGGCATTAATTGGTAGCAGGTTGTCTCAACCAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDAATLG*SSGSGC
Trigger: GCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCATATTCCTTCCAGATTaGTTAGTTTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALIFLPD*LVSPQG
Trigger: GCCTTGTGGAGAAACTAACCAATCTGGAAGGAATAT...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCCTCCTTCAGGCTCTaGATCTCCCCACGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSSFRL*ISPRRA
Trigger: GGCCCTCCGTGGGGAGATCCAGAGCCTGAAGGAGGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCCTCATCGGCGATACTaGAGGTTCGCTTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCPHRRY*RFAFST
Trigger: GGTTGAGAAAGCGAACCTCCAGTATCGCCGATGAGG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAACACTTTCACAATCTaGGCAGTAGTTAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPENTFTI*AVVKAL
Trigger: CAATGCTTTAACTACTGCCCAGATTGTGAAAGTGTT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTGTCAATTTTTGCCTaGACATCACTTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLSIFA*TSLSDP
Trigger: CGGGTCTGAAAGTGATGTCCAGGCAAAAATTGACAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTGTCAATTTTTGCCTaGACATCACTTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLSIFA*TSLSDP
Trigger: CGGGTCTGAAAGTGATGTCCAGGCAAAAATTGACAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp AGATTTCCAGGGCTGAGGCGGACAGCCTGTACCACGTaGCATTTTCTTAGCAACTCCCCAACTTACAGCCTA +
Preference number: 4 (lower is better)
Translates to: RFPGLRRTACTT*HFLSNSPTYSL
Trigger: TAGGCTGTAAGTTGGGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGTCCGCCTCAGCCCTGGAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp GTACCTCCTGCGGACCACATACATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTTGGTTCTGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VPPADHIHAPVL*NDGCCLGSAQK
Trigger: TTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATATCACCCATGTTCTaGCCACTGTATGCATTAATA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVISPMF*PLYALI
Trigger: TATTAATGCATACAGTGGTCAGAACATGGGTGATAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGGTAAGTCCACCGTaGGGGGAAACCGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLVSPP*GETGRT
Trigger: AGTGCGGCCGGTTTCCCCTCACGGTGGACTTACCAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDRISAW*WLPSAC
Trigger: GCATGCGGAAGGCAGCCATCACCATGCAGAGATACG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGCACTGAAGGTAGATaGTGGCATGCATGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSTEGR*WHACSS
Trigger: AGAGGAGCATGCATGCCATCATCTACCTTCAGTGCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGCGAGCCTCGATTTTaGGCTTCTTTAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSEPRF*ASLAHA
Trigger: AGCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCAGCGAGCCTCGATTTTaGGCTTCTTTAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCSEPRF*ASLAHA
Trigger: AGCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCT...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTCCTCTTCACTTAGTTaGAGACGTTCTAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSSSLS*RRSKSL
Trigger: AAGTGACTTAGAACGTCTTCAACTAAGTGAAGAGGA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGGTCAGCTGCTCCATaGGGACACGGTAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMRSAAP*GHGRQV
Trigger: CACCTGCCTACCGTGTCCTCATGGAGCAGCTGACCT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCGTTGGTCAGCCGGGTaGTCTCGTGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQRWSAG*SRAAGW
Trigger: CCAGCCTGCAGCACGAGATCACCCGGCTGACCAACG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCAGACCCGTGAAATaGAGCCCAGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFRPVK*SPGRGW
Trigger: CCAGCCTCGGCCTGGGCTTCATTTCACGGGTCTGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAAAACCTGTCAAGGTTaGAAATATGCACTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVKTCQG*KYALKE
Trigger: TTCCTTCAGTGCATATTTTCAACCTTGACAGGTTTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGAGAATGGACTTACTaGGTAACTGCAGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGREWTY*VTAAFS
Trigger: AGAAAAAGCTGCAGTTACTCAGTAAGTCCATTCTCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTCGTGCTACACAGGATaGAGCTGGGGGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSCYTG*SWGRSG
Trigger: CCCAGACCTCCCCCAGCTTCATCCTGTGTAGCACGA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGGTATTCTTGTCAATaGCTAAAAATCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASRYSCQ*LKISRP
Trigger: TGGCCTGGAGATTTTTAGTCATTGACAAGAATACCT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGAAAGGGCATTGTGTaGGGACTTCTCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRKGIV*GLLRMV
Trigger: CACCATCCTGAGAAGTCCTCACACAATGCCCTTTCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTAATACAACAGATTTaGACTTATAGCACGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVIQQI*TYSTLS
Trigger: GGAAAGCGTGCTATAAGTTCAAATCTGTTGTATTAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAGCTTCTTCAGCTACTaGAAAGATATGTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSFFSY*KDMWIH
Trigger: ATGGATCCACATATCTTTGCAGTAGCTGAAGAAGCT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACTTCAATCACAGGACTaGCTCCTTGTTTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLQSQD*LLVLCN
Trigger: ATTACACAAAACAAGGAGGCAGTCCTGTGATTGAAG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAACACCAATAAAAGAGTaGTGTTTGACAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGTPIKE*CLTAEW
Trigger: CCATTCTGCTGTCAAACAGCACTCTTTTATTGGTGT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTCTCTAACACATTCTTaGATGTTTGCTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVSLTHS*MFAFCH
Trigger: GTGACAGAAAGCAAACATGCAAGAATGTGTTAGAGA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFLNDGC*LGSAQK
Trigger: TTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCTCTGAACGAGTTTaGTCCAGGTCTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFSERV*SRSFRS
Trigger: GCTCCGGAAAGACCTGGAGCAAACTCGTTCAGAGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTATATTCAGACTCGTTaGTGCTGTGGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYYIQTR*CCGWSL
Trigger: CAGACTCCACCCACAGCAGCAACGAGTCTGAATATA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTTCCTTGGCCTTGCTaGGGAGCACCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLPWPC*GAPAPP
Trigger: AGGAGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTCCTTGGCCTTGCTaGGGAGCACCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLPWPC*GAPAPP
Trigger: AGGAGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGACACGGTAGGCAGGTaGACCTGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQDTVGR*TWGGHL
Trigger: GAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSRVIS*CRLASM
Trigger: CATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSRVIS*CRLASM
Trigger: CATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGTTAAGGATGAGTGTTaGTATAAAGATAACACAGCA +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEVKDEC*YKDNTA
Trigger: TGCTGTGTTATCTTTATAGCAACACTCATCCTTAAC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCAAGGTTGAAAATATaGACTGAAGGAATCAGATCT +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPESRLKI*TEGIRS
Trigger: AGATCTGATTCCTTCAGTGCATATTTTCAACCTTGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCAGCCTGTACCACGTTaGATTTTCTTAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYQPVPR*IFLATP
Trigger: GGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTCCTGCATCACAGGTaGCCACACCACCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLLHHR*PHHHCS
Trigger: GGAGCAGTGGTGGTGTGGGCACCTGTGATGCAGGAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGCCCAAACAGAGTATTaGATCCTCCCAGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCAQTEY*ILPEST
Trigger: AGTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCCAGGTATCCAAACCCTaGCAAACTTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLQVSKP*QTLCRA
Trigger: AGCTCTACACAAAGTTTGCCAGGGTTTGGATACCTG...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTCTTTGGATCTAGATaGTATTCCAAATCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVFGSR*YSKSFP
Trigger: AGGAAAGGATTTGGAATACCATCTAGATCCAAAGAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAGTGAGGCAGCTCCTTaGTCTTTGGATCTAGATGGT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSEAAP*SLDLDG
Trigger: ACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTCTCCTCTTCTGCCTaGAATACCACTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLSSSA*NTTLDF
Trigger: GAAATCCAGAGTGGTATTCCAGGCAGAAGAGGAGAG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTTGTCTTACCAAACTaGTATTTGTCCTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HTDLYMACPVTALGRHPVFVLPN*YLSLSS
Trigger: ACTGGACAAGGACAAATACCAGTTTGGTAAGACAAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMAATLG*SSGSGC
Trigger: GCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATATTCCTTCCAGATTaGTTAGTTTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGIFLPD*LVSPQG
Trigger: GCCTTGTGGAGAAACTAACCAATCTGGAAGGAATAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTAGGCAGGTGCACCTaGGGCGGTCACCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVGRCT*GGHLWG
Trigger: GCCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAAATTCCCTATCAGTTaGCTTCGGAATATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: ALEGKGARVKAALTAQPEKFPIS*LRNMFL
Trigger: CAAAAACATATTCCGAAGCCAACTGATAGGGAATTT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATATCACCCATGTTCTaGCCACTGTATGCATTAATA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGISPMF*PLYALI
Trigger: TATTAATGCATACAGTGGTCAGAACATGGGTGATAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCACTCTCCACTTACGATaGTGGACTGATTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLTLHLR*WTDFVH
Trigger: ATGAACGAAATCAGTCCATCATCGTAAGTGGAGAGT...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTGCAGGAGTTCGTGTaGGGGGTGTGCGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLQEFV*GVCALR
Trigger: CCTCAGGGCGCACACCCCTCACACGAACTCCTGCAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLGNRPH*FGWFPG
Trigger: TCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLRISAW*WLPSAC
Trigger: GCATGCGGAAGGCAGCCATCACCATGCAGAGATACG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCGCCAGTACTTTTGAATaGTGGTTGCTGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCASTFE*WLLPWF
Trigger: GAACCAAGGCAGCAACCATCATTCAAAAGTACTGGC...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCATGCGCCAGTACTTTTaGATGATGGTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCMRQYF*MMVAAL
Trigger: CAAGGCAGCAACCATCATTCAAAAGTACTGGCGCAT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTTCTTCCAGGCGACTaGACTCATTCAGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYFLPGD*THSEGS
Trigger: AGAACCTTCTGAATGAGTTCAGTCGCCTGGAAGAAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACGTTGGTCAGCCGGGTaGTCTCGTGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQRWSAG*SRAAGW
Trigger: CCAGCCTGCAGCACGAGATCACCCGGCTGACCAACG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGGGTCCATGCCATGCTaGCACATGACCGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMGSMPC*HMTEWK
Trigger: CTTCCACTCGGTCATGTGTCAGCATGGCATGGACCC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAAAGTTTCAAGACCTaGATCGTGAATATTCTGACA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQSFKT*IVNILT
Trigger: TGTCAGAATATTCACGATTCAGGTCTTGAAACTTTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATATAAACGAGGAACTTaGGGCCCATGTAAATTAACA +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGYKRGT*GPCKLT
Trigger: TGTTAATTTACATGGGCCTCAAGTTCCTCGTTTATA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTATAAACGAGGAACTTaGGGCCCATGTAAATTAACA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASYKRGT*GPCKLT
Trigger: TGTTAATTTACATGGGCCTCAAGTTCCTCGTTTATA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCGAACCAAATGGCTATaGCTTAATTGTGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASRTKWL*LNCALK
Trigger: TTTCAATGCACAATTAAGTCATAGCCATTTGGTTCG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTCCTAGGGTTACCATaGAAGTTATTTCTCACAACA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASFLGLP*KLFLTT
Trigger: TGTTGTGAGAAATAACTTTCATGGTAACCCTAGGAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGTAATACAACAGATTTaGACTTATAGCACGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASVIQQI*TYSTLS
Trigger: GGAAAGCGTGCTATAAGTTCAAATCTGTTGTATTAC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATATCTTAGCACTAGGTaGTATCTAGTGAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGYLSTR*YLVKTH
Trigger: ATGGGTTTTCACTAGATATCACCTAGTGCTAAGATA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCAGAACCACTCACAGTTaGAAAGTATCGCATGGCATA +
Preference number: 4 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFRTTHS*KVSHGI
Trigger: TATGCCATGCGATACTTTGCAACTGTGAGTGGTTCT...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCATGTGCCATCTCCTTTaGATCATCCACTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLMCHLL*IIHSFN
Trigger: ATTGAAGGAGTGGATGATGCAAAGGAGATGGCACAT...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCTCTAACACATTCTTaGATGTTTGCTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSLTHS*MFAFCH
Trigger: GTGACAGAAAGCAAACATGCAAGAATGTGTTAGAGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLNDGC*LGSAQK
Trigger: TTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTCATCAACTTTGCGCTaGAGCTGCATGATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSSTLR*SCMILF
Trigger: GAACAAGATCATGCAGCTGCAGCGCAAAGTTGATGA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTCTTCCTTGGCCTTaGTGCGGAGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLLPWP*CGAPAP
Trigger: AGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGACACGGTAGGCAGGTaGACCTGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQDTVGR*TWGGHL
Trigger: GAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCTGGGCCAGCAGCTaGTGCTGTCGGTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFWASS*CCRLFS
Trigger: GGAGAACAACCGACAGCAGCAGCTGCTGGCCCAGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACAGTCCAGTGTGTAGGTaGCCTCATCGGCGATACTGG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSPVCR*PHRRYW
Trigger: CCAGTATCGCCGATGAGGGCACCTACACACTGGACT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGACTTACTGAGTAACTaGAGCTTTTTCTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASDLLSN*SFFSLE
Trigger: TTCTAGAGAGAAAAAGCTGCAGTTACTCAGTAAGTC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATATTTTTAAAGTCTCCTaGATCACAGGTGCCCACACC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYIFKVS*ITGAHT
Trigger: GGTGTGGGCACCTGTGATGCAGGAGACTTTAAAAAT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAGGTGGCCTATAGCTaGAGGCCTGTCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKVAYS*RPVQAA
Trigger: TGCAGCCTGGACAGGCCTGCAGCTATAGGCCACCTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACCTGGAATACCACTCTaGATTTCTCTAAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGPGIPL*ISLKDK
Trigger: CTTATCTTTTAGAGAAATCCAGAGTGGTATTCCAGG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCATCGCGGGCATTCGTaGCCTGCAGCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSHRGHS*PAAWRW
Trigger: CCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCCTCGGATGGTCTTCTaGATCCGGATGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLPRMVF*IRMQAA
Trigger: AGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTGCAGCCACCCTCGGATaGTCTTCTGGATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSAATLG*SSGSGC
Trigger: GCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGC...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTCTGTGACCCGCTTCTaGAGCTTAAGGAACAATGAC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSVTRF*SLRNND
Trigger: GTCATTGTTCCTTAAGCTCCAGAAGCGGGTCACAGA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGGGGCGGTCACCTCTaGGGCACTTTTCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMWGGHL*GTFLTE
Trigger: CTCAGTGAGAAAAGTGCCCCAGAGGTGACCGCCCCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGTAGGCAGGTGCACCTaGGGCGGTCACCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQVGRCT*GGHLWG
Trigger: GCCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTAC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCTGTGACTGCAGCTaGGATTCCAGGAGCCTATTT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFCDCS*DSRSLF
Trigger: AAATAGGCTCCTGGAATCCCAGCTGCAGTCACAGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356338.10
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTCCTCCTTCAGGCTCTaGATCTCCCCACGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSSFRL*ISPRRA
Trigger: GGCCCTCCGTGGGGAGATCCAGAGCCTGAAGGAGGA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCCTGGGAATGTTGACTaGTCGGATGGGTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCPGNVD*SDGFIN
Trigger: ATTGATGAACCCATCCGACCAGTCAACATTCCCAGG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAACACTTTCACAATCTaGGCAGTAGTTAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGNTFTI*AVVKAL
Trigger: CAATGCTTTAACTACTGCCCAGATTGTGAAAGTGTT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGCCCAGGCCGAGGCTaGCTGGAATCTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSPGRG*LESGWF
Trigger: AAACCATCCAGATTCCAGCCAGCCTCGGCCTGGGCT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTTCCAATGGACTCCATaGTGGGGTTGGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDFQWTP*WGWRPR
Trigger: TCTTGGCCTCCAACCCCATCATGGAGTCCATTGGAA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCCCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCPTLPK*RMPASI
Trigger: AATACTTGCTGGCATCCTTCACTTAGGCAATGTTGG...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGAATGGAGAGCCTGATTaGCATTATCTACAATCCAGT +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVNGEPD*HYLQSS
Trigger: ACTGGATTGTAGATAATGTCAATCAGGCTCTCCATT...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYAFSSS*NSSGSI
Trigger: GATGCTACCAGAACTATTTCAAGATGATGAGAAGGC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGCAGGAGTTCGTGTaGGGGGTGTGCGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLQEFV*GVCALR
Trigger: CCTCAGGGCGCACACCCCTCACACGAACTCCTGCAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSGNRPH*FGWFPG
Trigger: TCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCC...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGGCCATCATCCGCCTaGAGCAGCACTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMWPSSA*SSTEGR
Trigger: TCTACCTTCAGTGCTGCTTCAGGCGGATGATGGCCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCTTATAGCGCTCCACTaGGCGAGCCTCGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLIALH*ASLDFE
Trigger: CTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGTCCTCTTCACTTAGTTaGAGACGTTCTAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVSSSLS*RRSKSL
Trigger: AAGTGACTTAGAACGTCTTCAACTAAGTGAAGAGGA...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTGGTTCCTCTGTCCTTaGTGGAATGTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCWFLCP*WNVFHF
Trigger: GAAATGGAAGACATTCCATCAAGGACAGAGGAACCA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGAGCTTAAGGAACAATaGCATGTCCAGAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCELKEQ*HVQRYL
Trigger: AAGGTACCTCTGGACATGTCATTGTTCCTTAAGCTC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGGGCACTTTTCTCACTaGGGGCCTTGCGCAACTCAT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMGHFSH*GPCATH
Trigger: ATGAGTTGCGCAAGGCCCTCAGTGAGAAAAGTGCCC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCATGTCGAACACACATaGACAGGATATATGCCGGTA +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCHVEHT*TGYMPV
Trigger: TACCGGCATATATCCTGTTCATGTGTGTTCGACATG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGACCCCAGACACGCCCTaGATCGTTTCATGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMTPDTP*IVSCSS
Trigger: GCTGGAACATGAAACGATTCAGGGCGTGTCTGGGGT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCCGAGTGGAAGGAGTTaGGCTGCCGGAGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQPSGRS*AAGGWS
Trigger: ACTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACATGACCTGGAAGACCTaGGAAGATTCAGGGTGCACG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDMTWKT*EDSGCT
Trigger: CGTGCACCCTGAATCTTCTCAGGTCTTCCAGGTCAT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGGGCAACTGAGGACTaGCTCCATCCACCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGATED*LHPPAF
Trigger: GAAGGCAGGTGGATGGAGTCAGTCCTCAGTTGCCCC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTCCTGTCTTTTTGGTTaGGACAACCTGCTACCAATT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSCLFG*DNLLPI
Trigger: AATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATATGGCCTGCCCAGTaGCAGCCCTCGGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQIWPAQ*QPSEGT
Trigger: GGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTCATTTGCTTACTTGTaGCACAGAGTCCCACTAACT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSFAYL*HRVPLT
Trigger: AGTTAGTGGGACTCTGTGTCACAAGTAAGCAAATGA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGTTCTGACCACTGTATaGATTAATAATATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASVLTTV*INNIFS
Trigger: GGAGAAGATATTATTAATGCATACAGTGGTCAGAAC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACAGCAAAGTGCAGGCCTaGCTAGTATGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSKVQA*LVCAIS
Trigger: GGAGATGGCACATACTAGGCAGGCCTGCACTTTGCT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTATTGTGCAGCTGTCTaGATCTCGGGATGTAAATCC +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCYCAAV*ISGCKS
Trigger: GGATTTACATCCCGAGATGCAGACAGCTGCACAATA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGACACCAATAAAAGAGTaGTGTTTGACAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVTPIKE*CLTAEW
Trigger: CCATTCTGCTGTCAAACAGCACTCTTTTATTGGTGT...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGACATTCTTGCATGTTTaGTTTCTGTCACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPTFLHV*FLSLST
Trigger: TGTGCTGAGTGACAGAAAGCAAACATGCAAGAATGT...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTAT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLLNDD*FVLTEY
Trigger: ATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCCTCTTGTAGTGTGTaGGGGCCAGCCAGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSSCSV*GPASPG
Trigger: TCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGACACGGTAGGCAGGTaGACCTGGGGCGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQDTVGR*TWGGHL
Trigger: GAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGGGCCAGCAGCTGCTaGTGTCGGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQWASSC*CRLFSS
Trigger: GGAGGAGAACAACCGACAGCAGCAGCTGCTGGCCCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACGGGTGATCTCGTGCTaGAGGCTGGCCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQRVISC*RLASMR
Trigger: CCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSRVIS*CRLASM
Trigger: CATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTCCAGTGTGTAGGTaGCCTCATCGGCGATACTGG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSPVCR*PHRRYW
Trigger: CCAGTATCGCCGATGAGGGCACCTACACACTGGACT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGTTAAGGATGAGTGTTaGTATAAAGATAACACAGCA +
Preference number: 4 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASVKDEC*YKDNTA
Trigger: TGCTGTGTTATCTTTATAGCAACACTCATCCTTAAC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTGCCCACACCACCACTaGTCCATATGGGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLCPHHH*SIWESR
Trigger: CCTGCTTTCCCATATGGAGCAGTGGTGGTGTGGGCA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTGCTCGGTTCCCACATaGCAGCTGCCAACTCTGATA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDCSVPT*QLPTLI
Trigger: TATCAGAGTTGGCAGCTGGCATGTGGGAACCGAGCA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTGGTACGCAGCACTTaGTCGGTTCCCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLVRST*SVPTCQ
Trigger: CTGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGACTTGTATATGGCCTaGCCAGTGACAGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLDLYMA*PVTALG
Trigger: TCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGGAGAAGGAGGGTCATaGAGGGCCACATCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMGEGGS*RATSSQ
Trigger: TTGACTGGATGTGGCCCTGCATGACCCTCCTTCTCC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCATCGCGGGCATTCGTaGCCTGCAGCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQHRGHS*PAAWRW
Trigger: CCATCTCCAAGCTGCAGGCCACGAATGCCCGCGATG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTGCTCTTTGGCCATTTaGCCTGGTCTGCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDCSLAI*PGLPLV
Trigger: CACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGCTCATCAAACGTGAATaGGAACTTGAAGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVLIKRE*ELEVIR
Trigger: CCTAATGACTTCAAGTTCCCATTCACGTTTGATGAG...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCGTTGCTGCTGTGGGTaGAGTCTGTTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDRCCCG*SLFSCV
Trigger: GACACAAGAGAACAGACTCCACCCACAGCAGCAACG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACAGGCTGGCTGGAATCTaGATGGTTTCTAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDRLAGI*MVSSAR
Trigger: CCTCGCACTAGAAACCATCCAGATTCCAGCCAGCCT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGACCTGGGAGGAAGCTaGAGCCCTGGAATAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMDLGGS*SPGIAE
Trigger: TTCTGCTATTCCAGGGCTCCAGCTTCCTCCCAGGTC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCCTAAACTGGGAAGGTaGCCTATAGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMPKLGR*PIAAGL
Trigger: CAGGCCTGCAGCTATAGGCCACCTTCCCAGTTTAGG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGATATCACCCATGTTCTaGCCACTGTATGCATTAATA +
Preference number: 4 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPISPMF*PLYALI
Trigger: TATTAATGCATACAGTGGTCAGAACATGGGTGATAT...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCACTCTCCACTTACGATaGTGGACTGATTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCTLHLR*WTDFVH
Trigger: ATGAACGAAATCAGTCCATCATCGTAAGTGGAGAGT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCCAATGGACTCCATaGTGGGGTTGGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFQWTP*WGWRPR
Trigger: TCTTGGCCTCCAACCCCATCATGGAGTCCATTGGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAATGGAGAGCCTGATTaGCATTATCTACAATCCAGT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYNGEPD*HYLQSS
Trigger: ACTGGATTGTAGATAATGTCAATCAGGCTCTCCATT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGNRPH*FGWFPG
Trigger: TCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGGTAAGTCCACCGTaGGGGGAAACCGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLVSPP*GETGRT
Trigger: AGTGCGGCCGGTTTCCCCTCACGGTGGACTTACCAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTGGTAAGTCCACCGTaGGGGGAAACCGGCCGCACT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLVSPP*GETGRT
Trigger: AGTGCGGCCGGTTTCCCCTCACGGTGGACTTACCAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTATAGCGCTCCACTaGGCGAGCCTCGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLIALH*ASLDFE
Trigger: CTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAGGTCAGCTGCTCCATaGGGACACGGTAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQRSAAP*GHGRQV
Trigger: CACCTGCCTACCGTGTCCTCATGGAGCAGCTGACCT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGTTGAGACCTTAAGATaGGGACTTCCTCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDVETLR*GLPPCG
Trigger: TCCGCAAGGAGGAAGTCCTCATCTTAAGGTCTCAAC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGGGGCAACTGAGGACTaGCTCCATCCACCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQGATED*LHPPAF
Trigger: GAAGGCAGGTGGATGGAGTCAGTCCTCAGTTGCCCC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGCCAGCAGGGGCAACTaGGGACTGACTCCATCCACC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQASRGN*GLTPST
Trigger: GGTGGATGGAGTCAGTCCTCAGTTGCCCCTGCTGGC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTACCCAGAGGATCCTTaGCTATGCCTGCTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDYPEDP*LCLLRN
Trigger: GTTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACAGGAGGGGCAGCACGTaGCCTCACGACATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDRRGST*PHDIFK
Trigger: TTTAAAAATGTCGTGAGGTCACGTGCTGCCCCTCCT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAATATGGCCTGCCCAGTaGCAGCCCTCGGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQIWPAQ*QPSEGT
Trigger: GGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATAT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGCCCACGCACACACTaGCTTGTATATGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQCPRTH*LVYGLP
Trigger: GGGCAGGCCATATACAAGTCAGTGTGTGCGTGGGCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACGGGCATTCGTGGCCTaGAGCTTGGAGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITRAFVA*SLEMGL
Trigger: CAAGCCCATCTCCAAGCTGCAGGCCACGAATGCCCG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGCCTTTGGTGGGCTTTaGAGGAGTTCGTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQAFGGL*RSSCEG
Trigger: CCCCTCACACGAACTCCTGCAAAGCCCACCAAAGGC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTCTCAGCTGCTGCACTaGCCTCTTCTCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSQLLH*PLLIKR
Trigger: ACGTTTGATGAGAAGAGGGCAGTGCAGCAGCTGAGA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCACCTGCTCCTCCTTaGGGTCCAGCTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAPAPP*GPAHPA
Trigger: TGCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTGCTGCGGAGCACCTaGTCCTCCTTGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLLRST*SSLRSS
Trigger: GCTGGACCGCAAGGAGGAGCAGGTGCTCCGCAGCAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTTCCTTGGCCTTGCTaGGGAGCACCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLPWPC*GAPAPP
Trigger: AGGAGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGGGCCAGCAGCTGCTaGTGTCGGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQWASSC*CRLFSS
Trigger: GGAGGAGAACAACCGACAGCAGCAGCTGCTGGCCCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTCTGGGCCAGCAGCTaGTGCTGTCGGTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQFWASS*CCRLFS
Trigger: GGAGAACAACCGACAGCAGCAGCTGCTGGCCCAGAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAAGTCACTCAGCACCTaGCGATACTCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMKSLST*RYSARS
Trigger: TGACCTGGCTGAGTATCGGCAGGTGCTGAGTGACTT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAGTCACTCAGCACCTaGCGATACTCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKSLST*RYSARS
Trigger: TGACCTGGCTGAGTATCGGCAGGTGCTGAGTGACTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTCCACCTGCCTTCAGTaGACAGTCAAACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSTCLQ*TVKQQA
Trigger: TGCCTGCTGTTTGACTGTGCACTGAAGGCAGGTGGA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCTGACTCCATCCACCTaGCTTCAGTGCACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLTPST*LQCTVK
Trigger: TTTGACTGTGCACTGAAGGCAGGTGGATGGAGTCAG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACAGGCCTGTCCAGGCTaGACAGCTCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQQACPG*TAHLVA
Trigger: AGCCACCAGGTGAGCTGTGCAGCCTGGACAGGCCTG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGTTTGTCTTACCAAACTaGTATTTGTCCTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPFVLPN*YLSLSS
Trigger: ACTGGACAAGGACAAATACCAGTTTGGTAAGACAAA...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCGTTGCTGCTGTGGGTaGAGTCTGTTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMRCCCG*SLFSCV
Trigger: GACACAAGAGAACAGACTCCACCCACAGCAGCAACG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGTCTTTCTTCTTCCTTaGCCTTGCTGCGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMVFLLP*PCCGAP
Trigger: AGGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGAC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTTGTCATCCTTGGGTTaGATGGCCTCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLSSLG*MASFWL
Trigger: GAGCCAGAAAGAGGCCATCCAACCCAAGGATGACAA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCCTCCTTCAGGCTCTaGATCTCCCCACGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSSFRL*ISPRRA
Trigger: GGCCCTCCGTGGGGAGATCCAGAGCCTGAAGGAGGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCCTCATCGGCGATACTaGAGGTTCGCTTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLPHRRY*RFAFST
Trigger: GGTTGAGAAAGCGAACCTCCAGTATCGCCGATGAGG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCCTCATCGGCGATACTaGAGGTTCGCTTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMPHRRY*RFAFST
Trigger: GGTTGAGAAAGCGAACCTCCAGTATCGCCGATGAGG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTGGCTGGAATCTGGATaGTTTCTAGTGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDWLESG*FLVRGK
Trigger: CTTCCCTCGCACTAGAAACCATCCAGATTCCAGCCA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGGACTGTGCAAAGATTaGGCTGATGGTAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDGLCKD*ADGKHQ
Trigger: CTGGTGCTTACCATCAGCCCAATCTTTGCACAGTCC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp TACTGGGCCTTGGGGTTCCCTGGTTACAAGGTATTCTaGTCAATGACTAAAAATCTCCAGGCCACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: YWALGFPGYKVF*SMTKNLQATKR
Trigger: TCTCTTGGTGGCCTGGAGATTTTTAGTCATTGACAAGAATACCTTGTAACCAGGGAACCCCAAGGCCCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTGCTTGGAGATGGGCTTaGTGTATGTCTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSAWRWA*CMSLWQ
Trigger: CTGCCACAGAGACATACATCAAGCCCATCTCCAAGC...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAATGGAGAGCCTGATTaGCATTATCTACAATCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCNGEPD*HYLQSS
Trigger: ACTGGATTGTAGATAATGTCAATCAGGCTCTCCATT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGGAAACCGGCCGCACTaGTTCGGATGGTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITGNRPH*FGWFPG
Trigger: TCCTGGAAACCATCCGAATCAGTGCGGCCGGTTTCC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACGTATCTCTGCATGGTaGTGGCTGCCTTCCGCATGC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQRISAW*WLPSAC
Trigger: GCATGCGGAAGGCAGCCATCACCATGCAGAGATACG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGCACTGAAGGTAGATaGTGGCATGCATGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSTEGR*WHACSS
Trigger: AGAGGAGCATGCATGCCATCATCTACCTTCAGTGCT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGCACGATGCGGTGATTaGGGGCTTCTTTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMARCGD*GLLFLA
Trigger: AGCAAGAAAAAGAAGCCCTCAATCACCGCATCGTGC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTCTGATTCTAGTTCTTaGCGCTTGAGTGACTCATAT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSDSSS*RLSDSY
Trigger: ATATGAGTCACTCAAGCGTCAAGAACTAGAATCAGA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGTTGAGACCTTAAGATaGGGACTTCCTCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMVETLR*GLPPCG
Trigger: TCCGCAAGGAGGAAGTCCTCATCTTAAGGTCTCAAC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTTTCCTGGGAATGTTaGCTGGTCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLSWEC*LVGWVH
Trigger: ATGAACCCATCCGACCAGTCAACATTCCCAGGAAAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACCGAGTGGAAGGAGTTaGGCTGCCGGAGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQPSGRS*AAGGWS
Trigger: ACTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTCAGACCCGTGAAATaGAGCCCAGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFRPVK*SPGRGW
Trigger: CCAGCCTCGGCCTGGGCTTCATTTCACGGGTCTGAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCAGAACACTGTACCCTaGCGCAATATCCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQQNTVP*RNIHPG
Trigger: CCCTGGGTGGATATTGCGTCAGGGTACAGTGTTCTG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGGTATTCTTGTCAATaGCTAAAAATCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRYSCQ*LKISRP
Trigger: TGGCCTGGAGATTTTTAGTCATTGACAAGAATACCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGTGTCTGAAGTTGGGTaGGAAAGTGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLVSEVG*ESVADR
Trigger: TCTGTCAGCCACACTTTCTCACCCAACTTCAGACAC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGGAGGGGCAGCACGTaGCCTCACGACATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLRRGST*PHDIFK
Trigger: TTTAAAAATGTCGTGAGGTCACGTGCTGCCCCTCCT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCCCACGCACACACTaGCTTGTATATGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCPRTH*LVYGLP
Trigger: GGGCAGGCCATATACAAGTCAGTGTGTGCGTGGGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCAATGCACTCATCCATaGACAGAGGTCACGGCAATA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDQCTHP*TEVTAI
Trigger: TATTGCCGTGACCTCTGTTCATGGATGAGTGCATTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCCTCACAGCACAGCCTaGGAACAAATTACAATGCAC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDPHSTA*EQITMH
Trigger: GTGCATTGTAATTTGTTCTCAGGCTGTGCTGTGAGG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTATCTTAGCACTAGGTaGTATCTAGTGAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYYLSTR*YLVKTH
Trigger: ATGGGTTTTCACTAGATATCACCTAGTGCTAAGATA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGGTTCTGACCACTGTATaGATTAATAATATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVVLTTV*INNIFS
Trigger: GGAGAAGATATTATTAATGCATACAGTGGTCAGAAC...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCCTTCAATCACAGGACTaGCTCCTTGTTTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCLQSQD*LLVLCN
Trigger: ATTACACAAAACAAGGAGGCAGTCCTGTGATTGAAG...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGGCCTGCCTAGTATGTaGCATCTCCTTTGCATCATC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLGLPSM*HLLCII
Trigger: GATGATGCAAAGGAGATGGCACATACTAGGCAGGCC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGCTTGGGAGGTATTGTaGAGCTGTCTGCATCTCGGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQAWEVL*SCLHLG
Trigger: CCCGAGATGCAGACAGCTGCACAATACCTCCCAAGC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACCCCGCACGTATCTCTaGATGGTGATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQPRTYL*MVMAAF
Trigger: GAAGGCAGCCATCACCATGCAGAGATACGTGCGGGG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACCCCGCACGTATCTCTaGATGGTGATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSPRTYL*MVMAAF
Trigger: GAAGGCAGCCATCACCATGCAGAGATACGTGCGGGG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLAISS*RLRTRP
Trigger: TGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCTTGTTTGTATCGATCTaGATGTTCCTCAATGCATTT +
Preference number: 4 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLLFVSI*MFLNAF
Trigger: AAATGCATTGAGGAACATGCAGATCGATACAAACAA...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATTCAGACTCGTTGCTaGTGTGGGTGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMIQTRC*CGWSLF
Trigger: GAACAGACTCCACCCACAGCAGCAACGAGTCTGAAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATCACCTGCTTCTCCTaGTCCAGCTCTGTGACCCGC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQITCFS*SSSVTR
Trigger: GCGGGTCACAGAGCTGGAGCAGGAGAAGCAGGTGAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATCACCTGCTTCTCCTaGTCCAGCTCTGTGACCCGC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITITCFS*SSSVTR
Trigger: GCGGGTCACAGAGCTGGAGCAGGAGAAGCAGGTGAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACGGTCCAGCTCATCCTaGATCACCTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITRSSSS*ITCFSC
Trigger: GCAGGAGAAGCAGGTGATGCAGGATGAGCTGGACCG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGCACCTGCTCCTCCTTaGGGTCCAGCTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQAPAPP*GPAHPA
Trigger: TGCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACTTCTTCCTTGGCCTTaGTGCGGAGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLLPWP*CGAPAP
Trigger: AGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGGGCCAGCAGCTGCTaGTGTCGGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQWASSC*CRLFSS
Trigger: GGAGGAGAACAACCGACAGCAGCAGCTGCTGGCCCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCTGGGCCAGCAGCTaGTGCTGTCGGTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFWASS*CCRLFS
Trigger: GGAGAACAACCGACAGCAGCAGCTGCTGGCCCAGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGGAAGGAGTTGAGCTaGCGGAGGATGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQWKELS*RRMESS
Trigger: ACTGGACTCCATCCTCCGGCAGCTCAACTCCTTCCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTACTTTCAACAGGATaGACTAGTTTTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLLSTG*TSFGSV
Trigger: AACAGAGCCAAAACTAGTGCATCCTGTTGAAAGTAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAAGGTGGCCTATAGCTaGAGGCCTGTCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITKVAYS*RPVQAA
Trigger: TGCAGCCTGGACAGGCCTGCAGCTATAGGCCACCTT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGAGAAGGAGGGTCATaGAGGGCCACATCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGEGGS*RATSSQ
Trigger: TTGACTGGATGTGGCCCTGCATGACCCTCCTTCTCC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGGCCTGGTCTGCCTTTaGTGGGCTTTGCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITGLVCL*WALQEF
Trigger: GAACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTTGTCTTACCAAACTaGTATTTGTCCTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYFVLPN*YLSLSS
Trigger: ACTGGACAAGGACAAATACCAGTTTGGTAAGACAAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACCTCGGATGGTCTTCTaGATCCGGATGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITPRMVF*IRMQAA
Trigger: AGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACCTCGGATGGTCTTCTaGATCCGGATGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSPRMVF*IRMQAA
Trigger: AGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGGGGCGGTCACCTCTaGGGCACTTTTCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQWGGHL*GTFLTE
Trigger: CTCAGTGAGAAAAGTGCCCCAGAGGTGACCGCCCCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTGTCATCCTTGGGTTaGATGGCCTCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLSSLG*MASFWL
Trigger: GAGCCAGAAAGAGGCCATCCAACCCAAGGATGACAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGTCATCCTTGGGTTaGATGGCCTCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLSSLG*MASFWL
Trigger: GAGCCAGAAAGAGGCCATCCAACCCAAGGATGACAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGCTTTCTCAACCCTGTaGGCTTCACCCCAGACACGC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITAFSTL*ASPQTR
Trigger: GCGTGTCTGGGGTGAAGCCCACAGGGTTGAGAAAGC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGGCTGGAATCTGGATaGTTTCTAGTGCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMWLESG*FLVRGK
Trigger: CTTCCCTCGCACTAGAAACCATCCAGATTCCAGCCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGCCCAGGCCGAGGCTaGCTGGAATCTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSPGRG*LESGWF
Trigger: AAACCATCCAGATTCCAGCCAGCCTCGGCCTGGGCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGCAGAGGAGGTTCTTTaGTGCCTTCCTAACAACAGC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMAEEVL*CLPNNS
Trigger: GCTGTTGTTAGGAAGGCACCAAAGAACCTCCTCTGC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGGCCTTGGGGTTCCCTaGTTACAAGGTATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMGLGVP*LQGILV
Trigger: GACAAGAATACCTTGTAACCAGGGAACCCCAAGGCC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAGCATTCTCTAAGCTaGCCTCTCACTGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKHSLS*PLTGSE
Trigger: CTCAGAGCCAGTGAGAGGCCAGCTTAGAGAATGCTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTGGCTTATAATCTTTaGGCAGCTCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLAYNL*AALLTS
Trigger: GGAAGTCAGCAGAGCTGCTCAAAGATTATAAGCCAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTTCCTTCCTCGAGGTaGAGCAGGAGGACTTTATCT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFPSSR*SRRTLS
Trigger: AGATAAAGTCCTCCTGCTTCACCTCGAGGAAGGAAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCAGGATTTCGTAAGTaGGGCAGCTCCTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSGFRK*GSSLVF
Trigger: AAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTTACGATGATGGACTaGTTTCGTTCATCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLTMMD*FRSSLA
Trigger: GGCCAGAGATGAACGAAATCAGTCCATCATCGTAAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTACGATGATGGACTaGTTTCGTTCATCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLTMMD*FRSSLA
Trigger: GGCCAGAGATGAACGAAATCAGTCCATCATCGTAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGCTTGGAGATGGGCTTaGTGTATGTCTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQAWRWA*CMSLWQ
Trigger: CTGCCACAGAGACATACATCAAGCCCATCTCCAAGC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGCCAGTACTTTTGAATaGTGGTTGCTGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMASTFE*WLLPWF
Trigger: GAACCAAGGCAGCAACCATCATTCAAAAGTACTGGC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGGCCATCATCCGCCTaGAGCAGCACTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQWPSSA*SSTEGR
Trigger: TCTACCTTCAGTGCTGCTTCAGGCGGATGATGGCCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATGGCCATCATCCGCCTaGAGCAGCACTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSWPSSA*SSTEGR
Trigger: TCTACCTTCAGTGCTGCTTCAGGCGGATGATGGCCA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTGGTTCCTCTGTCCTTaGTGGAATGTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDWFLCP*WNVFHF
Trigger: GAAATGGAAGACATTCCATCAAGGACAGAGGAACCA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGGGCACTTTTCTCACTaGGGGCCTTGCGCAACTCAT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITGHFSH*GPCATH
Trigger: ATGAGTTGCGCAAGGCCCTCAGTGAGAAAAGTGCCC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCTGGCTCACCAGTTaGGACCTTAAGATGAGGACT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFWLTS*DLKMRT
Trigger: AGTCCTCATCTTAAGGTCTCAACTGGTGAGCCAGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCTGGCTCACCAGTTaGGACCTTAAGATGAGGACT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFWLTS*DLKMRT
Trigger: AGTCCTCATCTTAAGGTCTCAACTGGTGAGCCAGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGGATGGGTTCATCAATaGTCTGTCCTGGGGATATGT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMGWVHQ*SVLGIC
Trigger: ACATATCCCCAGGACAGATCATTGATGAACCCATCC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATCCTGGAATCAAATTaGCTGCTACACCACGTGGCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMILESN*LLHHVA
Trigger: AGCCACGTGGTGTAGCAGTCAATTTGATTCCAGGAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGAGACAATCATTGGCTaGAGGATGTTCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDETIIG*RMFSNT
Trigger: GGTGTTAGAGAACATCCTTCAGCCAATGATTGTCTC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGGGTCCATGCCATGCTaGCACATGACCGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQGSMPC*HMTEWK
Trigger: CTTCCACTCGGTCATGTGTCAGCATGGCATGGACCC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATGACCTGGAAGACCTaGGAAGATTCAGGGTGCACG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQMTWKT*EDSGCT
Trigger: CGTGCACCCTGAATCTTCTCAGGTCTTCCAGGTCAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGATAGACGATTAAGTTaGGGGAAGGGGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDDRRLS*GKGKSE
Trigger: TTCACTCTTCCCCTTCCCTCAACTTAATCGTCTATC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCCTAGGGTTACCATaGAAGTTATTTCTCACAACA +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFLGLP*KLFLTT
Trigger: TGTTGTGAGAAATAACTTTCATGGTAACCCTAGGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCCTCACAGCACAGCCTaGGAACAAATTACAATGCAC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLPHSTA*EQITMH
Trigger: GTGCATTGTAATTTGTTCTCAGGCTGTGCTGTGAGG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGTTCTGACCACTGTATaGATTAATAATATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYVLTTV*INNIFS
Trigger: GGAGAAGATATTATTAATGCATACAGTGGTCAGAAC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGCTTGGGAGGTATTGTaGAGCTGTCTGCATCTCGGG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITAWEVL*SCLHLG
Trigger: CCCGAGATGCAGACAGCTGCACAATACCTCCCAAGC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCTTGGGAGGTATTGTaGAGCTGTCTGCATCTCGGG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAWEVL*SCLHLG
Trigger: CCCGAGATGCAGACAGCTGCACAATACCTCCCAAGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCAGCTTGGGAGGTATTGTaGAGCTGTCTGCATCTCGGG +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSAWEVL*SCLHLG
Trigger: CCCGAGATGCAGACAGCTGCACAATACCTCCCAAGC...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGCCTTTGGTGGGCTTTaGAGGAGTTCGTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQAFGGL*RSSCEG
Trigger: CCCCTCACACGAACTCCTGCAAAGCCCACCAAAGGC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACCCCGCACGTATCTCTaGATGGTGATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQPRTYL*MVMAAF
Trigger: GAAGGCAGCCATCACCATGCAGAGATACGTGCGGGG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLLNDG*CLGSAQ
Trigger: CTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACATGATGACTGCTTTGTaGTCACGGAGTATCTTGCGA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDMMTAL*SRSILR
Trigger: TCGCAAGATACTCCGTGAGCACAAAGCAGTCATCAT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSLAISS*RLRTRP
Trigger: TGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTCATCCTGCATCACCTaGTTCTCCTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSSCIT*FSCSSS
Trigger: AGAGCTGGAGCAGGAGAAGCAGGTGATGCAGGATGA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTCTTCCTTGGCCTTaGTGCGGAGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLLPWP*CGAPAP
Trigger: AGGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGGAAGGAGTTGAGCTaGCGGAGGATGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQWKELS*RRMESS
Trigger: ACTGGACTCCATCCTCCGGCAGCTCAACTCCTTCCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACACATTGTACCTGATCTaGATGCCTTTACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDTLYLI*MPLLQE
Trigger: CTCCTGGAGTAAAGGCATGCAGATCAGGTACAATGT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCAGCCTGTACCACGTTaGATTTTCTTAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMQPVPR*IFLATP
Trigger: GGGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCCCACACCACCACTaGTCCATATGGGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCPHHH*SIWESR
Trigger: CCTGCTTTCCCATATGGAGCAGTGGTGGTGTGGGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGCTCGGTTCCCACATaGCAGCTGCCAACTCTGATA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQCSVPT*QLPTLI
Trigger: TATCAGAGTTGGCAGCTGGCATGTGGGAACCGAGCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGGTACGCAGCACTTaGTCGGTTCCCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLVRST*SVPTCQ
Trigger: CTGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGTGAGGCAGCTCCTTaGTCTTTGGATCTAGATGGT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSEAAP*SLDLDG
Trigger: ACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGAGGCAGCTCCTTaGTCTTTGGATCTAGATGGT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSEAAP*SLDLDG
Trigger: ACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCCACATTGGCCTCACTaGCAGAACCACTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQPHWPH*QNHSQL
Trigger: CAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCCTGGAATACCACTCTaGATTTCTCTAAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCPGIPL*ISLKDK
Trigger: CTTATCTTTTAGAGAAATCCAGAGTGGTATTCCAGG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCCCTGGAATACCACTCTaGATTTCTCTAAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCPGIPL*ISLKDK
Trigger: CTTATCTTTTAGAGAAATCCAGAGTGGTATTCCAGG...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTCTCCTCTTCTGCCTaGAATACCACTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLSSSA*NTTLDF
Trigger: GAAATCCAGAGTGGTATTCCAGGCAGAAGAGGAGAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTTGGCCATTTGGCCTaGTCTGCCTTTGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQFGHLA*SAFGGL
Trigger: AAGCCCACCAAAGGCAGACCAGGCCAAATGGCCAAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGCTCTTTGGCCATTTaGCCTGGTCTGCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQCSLAI*PGLPLV
Trigger: CACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTTTCTTGTGCTCTTTaGCCATTTGGCCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFSCAL*PFGLVC
Trigger: GCAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTTTCTTGTGCTCTTTaGCCATTTGGCCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFSCAL*PFGLVC
Trigger: GCAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGTCTTTCTTCTTCCTTaGCCTTGCTGCGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQVFLLP*PCCGAP
Trigger: AGGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGAC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCATCCTTGGGTTGGATaGCCTCTTTCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQHPWVG*PLSGSP
Trigger: TGGTGAGCCAGAAAGAGGCCATCCAACCCAAGGATG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGATATGTTCTCCATCTaGCCCACTTCTAGTTCGCCA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMDMFSI*PTSSSP
Trigger: TGGCGAACTAGAAGTGGGCCAGATGGAGAACATATC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAACACTTTCACAATCTaGGCAGTAGTTAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCNTFTI*AVVKAL
Trigger: CAATGCTTTAACTACTGCCCAGATTGTGAAAGTGTT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACACAGGCACTACACACTaGTCTTTCCATCAGAGAATG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDTGTTH*SFHQRM
Trigger: CATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAAATTCCCTATCAGTTaGCTTCGGAATATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYKFPIS*LRNMFL
Trigger: CAAAAACATATTCCGAAGCCAACTGATAGGGAATTT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGCAGGAAAGCATATCTaGACCCAGGTACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMAGKHI*TQVLFL
Trigger: CAGAAACAGTACCTGGGTCCAGATATGCTTTCCTGC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCACCACTGCTCCATATaGGAAAGCAGGACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQHHCSI*ESRTAR
Trigger: TCTGGCTGTCCTGCTTTCCCATATGGAGCAGTGGTG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTCCAATGGACTCCATaGTGGGGTTGGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFQWTP*WGWRPR
Trigger: TCTTGGCCTCCAACCCCATCATGGAGTCCATTGGAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATTCCAATGGACTCCATaGTGGGGTTGGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSFQWTP*WGWRPR
Trigger: TCTTGGCCTCCAACCCCATCATGGAGTCCATTGGAA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLPTLPK*RMPASI
Trigger: AATACTTGCTGGCATCCTTCACTTAGGCAATGTTGG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCTTGGAGATGGGCTTaGTGTATGTCTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAWRWA*CMSLWQ
Trigger: CTGCCACAGAGACATACATCAAGCCCATCTCCAAGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDAFSSS*NSSGSI
Trigger: GATGCTACCAGAACTATTTCAAGATGATGAGAAGGC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACCCCGGACTCGCTTCTaGATGATGACTGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQPRTRF*MMTALC
Trigger: GCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGGCCATCATCCGCCTaGAGCAGCACTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQWPSSA*SSTEGR
Trigger: TCTACCTTCAGTGCTGCTTCAGGCGGATGATGGCCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTTCTTCCAGGCGACTaGACTCATTCAGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFLPGD*THSEGS
Trigger: AGAACCTTCTGAATGAGTTCAGTCGCCTGGAAGAAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTTCTTCCAGGCGACTaGACTCATTCAGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFLPGD*THSEGS
Trigger: AGAACCTTCTGAATGAGTTCAGTCGCCTGGAAGAAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCTTGACGCTTGAGTaGCTCATATTCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFLTLE*LIFQFC
Trigger: GCAGAACTGGAATATGAGTCACTCAAGCGTCAAGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCTTGACGCTTGAGTaGCTCATATTCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFLTLE*LIFQFC
Trigger: GCAGAACTGGAATATGAGTCACTCAAGCGTCAAGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGGGCACTTTTCTCACTaGGGGCCTTGCGCAACTCAT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQGHFSH*GPCATH
Trigger: ATGAGTTGCGCAAGGCCCTCAGTGAGAAAAGTGCCC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGAGACAATCATTGGCTaGAGGATGTTCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMETIIG*RMFSNT
Trigger: GGTGTTAGAGAACATCCTTCAGCCAATGATTGTCTC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACCCCAGACACGCCCTaGATCGTTTCATGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTPDTP*IVSCSS
Trigger: GCTGGAACATGAAACGATTCAGGGCGTGTCTGGGGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATGACCTGGAAGACCTaGGAAGATTCAGGGTGCACG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITMTWKT*EDSGCT
Trigger: CGTGCACCCTGAATCTTCTCAGGTCTTCCAGGTCAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCTGGCTCCAGCACTTaGCAGGACAAAGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSGSST*QDKDRR
Trigger: TCTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGGGAAGGGGAAGAGTaGATGAGTAGGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITREGEE*MSRGKA
Trigger: AGCCTTTCCCCTACTCATTCACTCTTCCCCTTCCCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTGCATGTAGTAAGGTaGATGGGGAGGGGATTATTA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLHVVR*MGRGLL
Trigger: TAATAATCCCCTCCCCATTCACCTTACTACATGCAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTTGTGCTTCTGCACCTaGCAAAAGAAGCATCAGATA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLCFCT*QKKHQI
Trigger: TATCTGATGCTTCTTTTGTCAGGTGCAGAAGCACAA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAAAACCACCTGGCGCTaGGCACTTGGTCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQKTTWR*ALGLLK
Trigger: TTTAAGGAGACCAAGTGCTCAGCGCCAGGTGGTTTT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGCCTGCCTAGTATGTaGCATCTCCTTTGCATCATC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGLPSM*HLLCII
Trigger: GATGATGCAAAGGAGATGGCACATACTAGGCAGGCC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCAAGCAAAGTGCAGGCCTaGCTAGTATGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSSKVQA*LVCAIS
Trigger: GGAGATGGCACATACTAGGCAGGCCTGCACTTTGCT...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTGCCTAAGTGAAGGATaGCAGCAAGTATTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDCLSEG*QQVFGK
Trigger: TTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTATTGTGCAGCTGTCTaGATCTCGGGATGTAAATCC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMYCAAV*ISGCKS
Trigger: GGATTTACATCCCGAGATGCAGACAGCTGCACAATA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACATGCTCTCAGCTGCTaGACTGCCCTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQHALSC*TALFSS
Trigger: TGATGAGAAGAGGGCAGTGCAGCAGCTGAGAGCATG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLNDGC*LGSAQK
Trigger: TTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLNDGC*LGSAQK
Trigger: TTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSLLNDG*CLGSAQ
Trigger: CTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATGATGACTGCTTTGTaGTCACGGAGTATCTTGCGA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLMMTAL*SRSILR
Trigger: TCGCAAGATACTCCGTGAGCACAAAGCAGTCATCAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTGGCAATTTCTTCCTaGAGACTAAGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLAISS*RLRTRP
Trigger: TGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTCTCTGAACGAGTTTaGTCCAGGTCTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQFSERV*SRSFRS
Trigger: GCTCCGGAAAGACCTGGAGCAAACTCGTTCAGAGAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTGTTTGTATCGATCTaGATGTTCCTCAATGCATTT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLFVSI*MFLNAF
Trigger: AAATGCATTGAGGAACATGCAGATCGATACAAACAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCATCCTGCATCACCTaGTTCTCCTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSSCIT*FSCSSS
Trigger: AGAGCTGGAGCAGGAGAAGCAGGTGATGCAGGATGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCATCCTGCATCACCTaGTTCTCCTGCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSSCIT*FSCSSS
Trigger: AGAGCTGGAGCAGGAGAAGCAGGTGATGCAGGATGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATCTGCTTGACCACCTaGTTGATCAGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQICLTT*LISSGS
Trigger: GGACCCTGAACTGATCAAGCAGGTGGTCAAGCAGAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGACATTGTACCTGATCTaGATGCCTTTACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMTLYLI*MPLLQE
Trigger: CTCCTGGAGTAAAGGCATGCAGATCAGGTACAATGT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTCAAGGTTGAAAATATaGACTGAAGGAATCAGATCT +
Preference number: 4 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSRLKI*TEGIRS
Trigger: AGATCTGATTCCTTCAGTGCATATTTTCAACCTTGA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGAACAACAAGGACTGTaGAAAGATTGGGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMEQQGL*KDWADG
Trigger: ACCATCAGCCCAATCTTTGCACAGTCCTTGTTGTTC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACAGCCAGAGGGCTGTaGGACATCAGGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTARGL*DIRQVT
Trigger: AGTGACTTGCCTGATGTCGCACAGCCCTCTGGCTGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGCCCAAACAGAGTATTaGATCCTCCCAGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQAQTEY*ILPEST
Trigger: AGTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCAGGTATCCAAACCCTaGCAAACTTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMQVSKP*QTLCRA
Trigger: AGCTCTACACAAAGTTTGCCAGGGTTTGGATACCTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACCTTTTCCTCCACATTaGCCTCACTGGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQPFPPH*PHWQNH
Trigger: GTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCTCTCCTCTTCTGCCTaGAATACCACTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSLSSSA*NTTLDF
Trigger: GAAATCCAGAGTGGTATTCCAGGCAGAAGAGGAGAG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATTTGGCCATTTGGCCTaGTCTGCCTTTGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSFGHLA*SAFGGL
Trigger: AAGCCCACCAAAGGCAGACCAGGCCAAATGGCCAAA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCTCTTTGGCCATTTaGCCTGGTCTGCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCSLAI*PGLPLV
Trigger: CACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGCTCTTTGGCCATTTaGCCTGGTCTGCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQCSLAI*PGLPLV
Trigger: CACCAAAGGCAGACCAGGCCAAATGGCCAAAGAGCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTTTTCTTGTGCTCTTTaGCCATTTGGCCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSFSCAL*PFGLVC
Trigger: GCAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGACTCGTTGCTGCTGTaGGTGGAGTCTGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQDSLLL*VESVLL
Trigger: CAAGAGAACAGACTCCACCCACAGCAGCAACGAGTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGTCTTTCTTCTTCCTTaGCCTTGCTGCGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQVFLLP*PCCGAP
Trigger: AGGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGAC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACATCCTTGGGTTGGATaGCCTCTTTCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITHPWVG*PLSGSP
Trigger: TGGTGAGCCAGAAAGAGGCCATCCAACCCAAGGATG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACATCAATGATCTGTCCTaGGGATATGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDINDLS*GYVLHL
Trigger: CAGATGGAGAACATATCCCCAGGACAGATCATTGAT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGACTGCTACACCACGTaGCTTCAGTTCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQDCYTT*LQFQNQ
Trigger: CTGATTCTGGAACTGAAGCCACGTGGTGTAGCAGTC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACCTCATCGGCGATACTaGAGGTTCGCTTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQPHRRY*RFAFST
Trigger: GGTTGAGAAAGCGAACCTCCAGTATCGCCGATGAGG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGGCTGGCTGGAATCTaGATGGTTTCTAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITRLAGI*MVSSAR
Trigger: CCTCGCACTAGAAACCATCCAGATTCCAGCCAGCCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLTVPS*LRMSVA
Trigger: AGCAACACTCATCCTTAACCAACTAGGTACCGTGAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGCAGAGGAGGTTCTTTaGTGCCTTCCTAACAACAGC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQAEEVL*CLPNNS
Trigger: GCTGTTGTTAGGAAGGCACCAAAGAACCTCCTCTGC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGGAAGCTGGAGCCCTaGAATAGCAGAACCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQRKLEP*NSRTFV
Trigger: CACAAAGGTTCTGCTATTCCAGGGCTCCAGCTTCCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGCCTTGGGGTTCCCTaGTTACAAGGTATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGLGVP*LQGILV
Trigger: GACAAGAATACCTTGTAACCAGGGAACCCCAAGGCC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGACTGTGCAAAGATTaGGCTGATGGTAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGLCKD*ADGKHQ
Trigger: CTGGTGCTTACCATCAGCCCAATCTTTGCACAGTCC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGAGGACTTCTCAGGATaGTGGCAGGTGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITEDFSG*WQVPIF
Trigger: GAAAATGGGCACCTGCCACCATCCTGAGAAGTCCTC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACACCACTGCTCCATATaGGAAAGCAGGACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITHHCSI*ESRTAR
Trigger: TCTGGCTGTCCTGCTTTCCCATATGGAGCAGTGGTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACATTCCAGGAGCCTGTTaGCTTGTTTTAACCCTTCAT +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDIPGAC*LVLTLH
Trigger: ATGAAGGGTTAAAACAAGCCAACAGGCTCCTGGAAT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp CTCCAAACTGACAATAATCCCCAAATTCCCTATCAGTaGGCTTCGGAATATGTTTTTGTGCTTCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: LQTDNNPQIPYQ*ASEYVFVLLHL
Trigger: CAGGTGCAGAAGCACAAAAACATATTCCGAAGCCAACTGATAGGGAATTTGGGGATTATTGTCAGTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCTTACGATGATGGACTaGTTTCGTTCATCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLTMMD*FRSSLA
Trigger: GGCCAGAGATGAACGAAATCAGTCCATCATCGTAAG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGACTCTCCACTTACGATaGTGGACTGATTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLTLHLR*WTDFVH
Trigger: ATGAACGAAATCAGTCCATCATCGTAAGTGGAGAGT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTCCAATGGACTCCATaGTGGGGTTGGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFQWTP*WGWRPR
Trigger: TCTTGGCCTCCAACCCCATCATGGAGTCCATTGGAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGCTTGGAGATGGGCTTaGTGTATGTCTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQAWRWA*CMSLWQ
Trigger: CTGCCACAGAGACATACATCAAGCCCATCTCCAAGC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGGACACGGTAGCGGCTaGAAAATTCTTGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITGHGSG*KILGKS
Trigger: GGACTTACCAAGAATTTTTCAGCCGCTACCGTGTCC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGGACACGGTAGCGGCTaGAAAATTCTTGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQGHGSG*KILGKS
Trigger: GGACTTACCAAGAATTTTTCAGCCGCTACCGTGTCC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGCACTGAAGGTAGATaGTGGCATGCATGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSTEGR*WHACSS
Trigger: AGAGGAGCATGCATGCCATCATCTACCTTCAGTGCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAGCGAGCCTCGATTTTaGGCTTCTTTAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSEPRF*ASLAHA
Trigger: AGCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTATAGCGCTCCACTaGGCGAGCCTCGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLIALH*ASLDFE
Trigger: CTCAAAATCGAGGCTCGCTCAGTGGAGCGCTATAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCTTCCTTCAGATTTaGTACCAGCTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFFLQI*YQLLCF
Trigger: GAAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCACGATGCGGTGATTaGGGGCTTCTTTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQARCGD*GLLFLA
Trigger: AGCAAGAAAAAGAAGCCCTCAATCACCGCATCGTGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGCTGCACGATGCGGTaGTTGAGGGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQCCTMR*LRASFS
Trigger: AGAAAAAGAAGCCCTCAATCACCGCATCGTGCAGCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCTGCACGATGCGGTaGTTGAGGGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCCTMR*LRASFS
Trigger: AGAAAAAGAAGCCCTCAATCACCGCATCGTGCAGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTCATTCAGAAGGTTCTaGTATCTCAGCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSFRRF*YLSLSS
Trigger: TGATGAAAGGCTGAGATATCAGAACCTTCTGAATGA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTCTGATTCTAGTTCTTaGCGCTTGAGTGACTCATAT +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSDSSS*RLSDSY
Trigger: ATATGAGTCACTCAAGCGTCAAGAACTAGAATCAGA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTTGAGACCTTAAGATaGGGACTTCCTCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVETLR*GLPPCG
Trigger: TCCGCAAGGAGGAAGTCCTCATCTTAAGGTCTCAAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGTTGAGACCTTAAGATaGGGACTTCCTCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQVETLR*GLPPCG
Trigger: TCCGCAAGGAGGAAGTCCTCATCTTAAGGTCTCAAC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTTTCCTGGGAATGTTaGCTGGTCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLSWEC*LVGWVH
Trigger: ATGAACCCATCCGACCAGTCAACATTCCCAGGAAAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACTTTCCTGGGAATGTTaGCTGGTCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLSWEC*LVGWVH
Trigger: ATGAACCCATCCGACCAGTCAACATTCCCAGGAAAG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATCCTGGAATCAAATTaGCTGCTACACCACGTGGCT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQILESN*LLHHVA
Trigger: AGCCACGTGGTGTAGCAGTCAATTTGATTCCAGGAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGCTACTTGTGCAGGTaGATCTGTAGGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMCYLCR*ICRYLH
Trigger: ATGCAAATACCTACAGATTCACCTGCACAAGTAGCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGGGAAGGGGAAGAGTaGATGAGTAGGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQREGEE*MSRGKA
Trigger: AGCCTTTCCCCTACTCATTCACTCTTCCCCTTCCCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCCTGTCTTTTTGGTTaGGACAACCTGCTACCAATT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSCLFG*DNLLPI
Trigger: AATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGAACCACTCACAGTTaGAAAGTATCGCATGGCATA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLRTTHS*KVSHGI
Trigger: TATGCCATGCGATACTTTGCAACTGTGAGTGGTTCT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGTTTCTCTCCTCTTCTaGCTGGAATACCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQVSLLF*LEYHSG
Trigger: TCCAGAGTGGTATTCCAGGCAGAAGAGGAGAGAAAC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGCAAAGTGCAGGCCTaGCTAGTATGTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSKVQA*LVCAIS
Trigger: GGAGATGGCACATACTAGGCAGGCCTGCACTTTGCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGCCTAAGTGAAGGATaGCAGCAAGTATTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMCLSEG*QQVFGK
Trigger: TTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCTCAGCTGCTGCACTaGCCTCTTCTCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSQLLH*PLLIKR
Trigger: ACGTTTGATGAGAAGAGGGCAGTGCAGCAGCTGAGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACATGCTCTCAGCTGCTaGACTGCCCTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQHALSC*TALFSS
Trigger: TGATGAGAAGAGGGCAGTGCAGCAGCTGAGAGCATG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCTTCTGGATCCGGATaGAGGCAGCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSSGSG*RQLSVC
Trigger: ACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCTTCTGGATCCGGATaGAGGCAGCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSSGSG*RQLSVC
Trigger: ACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTCTGAATGATGACTaGTTTGTGCTCACGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLLNDD*FVLTEY
Trigger: ATACTCCGTGAGCACAAAGCAGTCATCATTCAGAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAAGTCACTCAGCACCTaGCGATACTCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQKSLST*RYSARS
Trigger: TGACCTGGCTGAGTATCGGCAGGTGCTGAGTGACTT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATCTGCTTGACCACCTaGTTGATCAGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITICLTT*LISSGS
Trigger: GGACCCTGAACTGATCAAGCAGGTGGTCAAGCAGAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATCTGCTTGACCACCTaGTTGATCAGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQICLTT*LISSGS
Trigger: GGACCCTGAACTGATCAAGCAGGTGGTCAAGCAGAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCCCAAACAGAGTATTaGATCCTCCCAGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAQTEY*ILPEST
Trigger: AGTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACCACATTGGCCTCACTaGCAGAACCACTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQPHWPH*QNHSQL
Trigger: CAACTGTGAGTGGTTCTGCCAGTGAGGCCAATGTGG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACCTTTTCCTCCACATTaGCCTCACTGGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQPFPPH*PHWQNH
Trigger: GTGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTTGGCCATTTGGCCTaGTCTGCCTTTGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFGHLA*SAFGGL
Trigger: AAGCCCACCAAAGGCAGACCAGGCCAAATGGCCAAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACGTTGCTGCTGTGGGTaGAGTCTGTTCTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRCCCG*SLFSCV
Trigger: GACACAAGAGAACAGACTCCACCCACAGCAGCAACG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACATCCTTGGGTTGGATaGCCTCTTTCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQHPWVG*PLSGSP
Trigger: TGGTGAGCCAGAAAGAGGCCATCCAACCCAAGGATG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGTCATCCTTGGGTTaGATGGCCTCTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLSSLG*MASFWL
Trigger: GAGCCAGAAAGAGGCCATCCAACCCAAGGATGACAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTATTCTTGTCATCCTTaGGTTGGATGGCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLYSCHP*VGWPLS
Trigger: AGAAAGAGGCCATCCAACCCAAGGATGACAAGAATA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCCTGGGAATGTTGACTaGTCGGATGGGTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQPGNVD*SDGFIN
Trigger: ATTGATGAACCCATCCGACCAGTCAACATTCCCAGG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGACTGCTACACCACGTaGCTTCAGTTCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQDCYTT*LQFQNQ
Trigger: CTGATTCTGGAACTGAAGCCACGTGGTGTAGCAGTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGCATCCATGAGCAGCTaGGGAGAGTCTTTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQASMSS*GESFLS
Trigger: AGACAGGAAAGACTCTCCCCAGCTGCTCATGGATGC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGGCTGGCTGGAATCTaGATGGTTTCTAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRLAGI*MVSSAR
Trigger: CCTCGCACTAGAAACCATCCAGATTCCAGCCAGCCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGGAAGCTGGAGCCCTaGAATAGCAGAACCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITRKLEP*NSRTFV
Trigger: CACAAAGGTTCTGCTATTCCAGGGCTCCAGCTTCCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGAGGACTTCTCAGGATaGTGGCAGGTGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQEDFSG*WQVPIF
Trigger: GAAAATGGGCACCTGCCACCATCCTGAGAAGTCCTC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTAAAACAAGTAACTTaGTACGCAGCACTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLKQVT*YAALAR
Trigger: CCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATTCCAGGAGCCTGTTaGCTTGTTTTAACCCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLIPGAC*LVLTLH
Trigger: ATGAAGGGTTAAAACAAGCCAACAGGCTCCTGGAAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp TTTATCACTAAGCAGCTGACATTACCCAGAGGATCCTaGACTATGCCTGCTAAGGAACTCTATGAATTAGTG +
Preference number: 4 (lower is better)
Translates to: FITKQLTLPRGS*TMPAKELYELV
Trigger: CACTAATTCATAGAGTTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACTGGCTTATAATCTTTaGGCAGCTCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSLAYNL*AALLTS
Trigger: GGAAGTCAGCAGAGCTGCTCAAAGATTATAAGCCAG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCAGGATTTCGTAAGTaGGGCAGCTCCTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSGFRK*GSSLVF
Trigger: AAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTTACGATGATGGACTaGTTTCGTTCATCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLTMMD*FRSSLA
Trigger: GGCCAGAGATGAACGAAATCAGTCCATCATCGTAAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQPTLPK*RMPASI
Trigger: AATACTTGCTGGCATCCTTCACTTAGGCAATGTTGG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGGCTGAAGTTGGACTaGTGGCCTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQWLKLD*WPSHHL
Trigger: AAGATGATGAGAAGGCCATCAGTCCAACTTCAGCCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATGGCTGAAGTTGGACTaGTGGCCTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSWLKLD*WPSHHL
Trigger: AAGATGATGAGAAGGCCATCAGTCCAACTTCAGCCA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGCCAGTACTTTTGAATaGTGGTTGCTGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITASTFE*WLLPWF
Trigger: GAACCAAGGCAGCAACCATCATTCAAAAGTACTGGC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATGCGCCAGTACTTTTaGATGATGGTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQMRQYF*MMVAAL
Trigger: CAAGGCAGCAACCATCATTCAAAAGTACTGGCGCAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATGCGCCAGTACTTTTaGATGATGGTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITMRQYF*MMVAAL
Trigger: CAAGGCAGCAACCATCATTCAAAAGTACTGGCGCAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGCGAGCCTCGATTTTaGGCTTCTTTAGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSEPRF*ASLAHA
Trigger: AGCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTCCTCTTCACTTAGTTaGAGACGTTCTAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSSSLS*RRSKSL
Trigger: AAGTGACTTAGAACGTCTTCAACTAAGTGAAGAGGA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCCTCTTCACTTAGTTaGAGACGTTCTAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSSSLS*RRSKSL
Trigger: AAGTGACTTAGAACGTCTTCAACTAAGTGAAGAGGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTTCTTCCTTCAGATTTaGTACCAGCTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSFFLQI*YQLLCF
Trigger: GAAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGCTGCACGATGCGGTaGTTGAGGGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQCCTMR*LRASFS
Trigger: AGAAAAAGAAGCCCTCAATCACCGCATCGTGCAGCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTCATTCAGAAGGTTCTaGTATCTCAGCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSFRRF*YLSLSS
Trigger: TGATGAAAGGCTGAGATATCAGAACCTTCTGAATGA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCATTCAGAAGGTTCTaGTATCTCAGCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSFRRF*YLSLSS
Trigger: TGATGAAAGGCTGAGATATCAGAACCTTCTGAATGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCTGATTCTAGTTCTTaGCGCTTGAGTGACTCATAT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSDSSS*RLSDSY
Trigger: ATATGAGTCACTCAAGCGTCAAGAACTAGAATCAGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTCTGGCTCACCAGTTaGGACCTTAAGATGAGGACT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFWLTS*DLKMRT
Trigger: AGTCCTCATCTTAAGGTCTCAACTGGTGAGCCAGAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTTCCTGGGAATGTTaGCTGGTCGGATGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLSWEC*LVGWVH
Trigger: ATGAACCCATCCGACCAGTCAACATTCCCAGGAAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTGTCATATTACTACATaGCTTTCCAGTGTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLCHITT*LSSVCY
Trigger: GTAGCAGACACTGGAAAGTCATGTAGTAATATGACA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGAGAATGGACTTACTaGGTAACTGCAGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMREWTY*VTAAFS
Trigger: AGAAAAAGCTGCAGTTACTCAGTAAGTCCATTCTCT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCGAACCAAATGGCTATaGCTTAATTGTGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDRTKWL*LNCALK
Trigger: TTTCAATGCACAATTAAGTCATAGCCATTTGGTTCG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGATAGACGATTAAGTTaGGGGAAGGGGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQDRRLS*GKGKSE
Trigger: TTCACTCTTCCCCTTCCCTCAACTTAATCGTCTATC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATACCCAGAGGATCCTTaGCTATGCCTGCTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQYPEDP*LCLLRN
Trigger: GTTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACCTCCCAGAGAGCACTaGTTCATGACAGAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQPPREH*FMTEVK
Trigger: CTTGACTTCTGTCATGAATCAGTGCTCTCTGGGAGG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAATGCACTCATCCATaGACAGAGGTCACGGCAATA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITQCTHP*TEVTAI
Trigger: TATTGCCGTGACCTCTGTTCATGGATGAGTGCATTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGTTTCTCTCCTCTTCTaGCTGGAATACCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQVSLLF*LEYHSG
Trigger: TCCAGAGTGGTATTCCAGGCAGAAGAGGAGAGAAAC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTTTCTCTCCTCTTCTaGCTGGAATACCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVSLLF*LEYHSG
Trigger: TCCAGAGTGGTATTCCAGGCAGAAGAGGAGAGAAAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGGCCTGCCTAGTATGTaGCATCTCCTTTGCATCATC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQGLPSM*HLLCII
Trigger: GATGATGCAAAGGAGATGGCACATACTAGGCAGGCC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCTCAGCTGCTGCACTaGCCTCTTCTCATCAAACGT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSQLLH*PLLIKR
Trigger: ACGTTTGATGAGAAGAGGGCAGTGCAGCAGCTGAGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGACATTCTTGCATGTTTaGTTTCTGTCACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMTFLHV*FLSLST
Trigger: TGTGCTGAGTGACAGAAAGCAAACATGCAAGAATGT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCTTCTGGATCCGGATaGAGGCAGCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSSGSG*RQLSVC
Trigger: ACAAACTGAGAGCTGCCTGCATCCGGATCCAGAAGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLLNDG*CLGSAQ
Trigger: CTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTCATCAACTTTGCGCTaGAGCTGCATGATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSSTLR*SCMILF
Trigger: GAACAAGATCATGCAGCTGCAGCGCAAAGTTGATGA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTCTCTGAACGAGTTTaGTCCAGGTCTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFSERV*SRSFRS
Trigger: GCTCCGGAAAGACCTGGAGCAAACTCGTTCAGAGAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAATTCAGACTCGTTGCTaGTGTGGGTGGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQIQTRC*CGWSLF
Trigger: GAACAGACTCCACCCACAGCAGCAACGAGTCTGAAT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATATATTCAGACTCGTTaGTGCTGTGGGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITYIQTR*CCGWSL
Trigger: CAGACTCCACCCACAGCAGCAACGAGTCTGAATATA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTCATATTCCAGTTCTaGACCTCTAATTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLIFQF*TSNLWS
Trigger: AGACCACAAATTAGAGGTGCAGAACTGGAATATGAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGAGGAGGTTCTTTGGTaGCTTCCTAACAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITEEVLW*LPNNSS
Trigger: TGAGCTGTTGTTAGGAAGGCACCAAAGAACCTCCTC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGAGGACTTTATCTCCTaGCTTATAATCTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMEDFIS*LIIFEQ
Trigger: CTGCTCAAAGATTATAAGCCAGGAGATAAAGTCCTC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTTTCTTGTGCTCTTTaGCCATTTGGCCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFSCAL*PFGLVC
Trigger: GCAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCTCATCAAACGTGAATaGGAACTTGAAGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLLIKRE*ELEVIR
Trigger: CCTAATGACTTCAAGTTCCCATTCACGTTTGATGAG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATATTCCTTCCAGATTaGTTAGTTTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLIFLPD*LVSPQG
Trigger: GCCTTGTGGAGAAACTAACCAATCTGGAAGGAATAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCTGTGACTGCAGCTaGGATTCCAGGAGCCTATTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFCDCS*DSRSLF
Trigger: AAATAGGCTCCTGGAATCCCAGCTGCAGTCACAGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356338.10
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGATATGTTCTCCATCTaGCCCACTTCTAGTTCGCCA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITDMFSI*PTSSSP
Trigger: TGGCGAACTAGAAGTGGGCCAGATGGAGAACATATC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACCTGGGAATGTTGACTaGTCGGATGGGTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITPGNVD*SDGFIN
Trigger: ATTGATGAACCCATCCGACCAGTCAACATTCCCAGG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGACTGCTACACCACGTaGCTTCAGTTCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQDCYTT*LQFQNQ
Trigger: CTGATTCTGGAACTGAAGCCACGTGGTGTAGCAGTC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGGAAGCTGGAGCCCTaGAATAGCAGAACCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRKLEP*NSRTFV
Trigger: CACAAAGGTTCTGCTATTCCAGGGCTCCAGCTTCCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCATTTACTGGGCCTTaGGGTTCCCTGGTTACAAGG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSFTGP*GSLVTR
Trigger: CCTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATACAGAATCATTTACTaGGCCTTGGGGTTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQYRIIY*ALGFPG
Trigger: ACCAGGGAACCCCAAGGCCCAGTAAATGATTCTGTA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAAGCAATCCTCAAACTaGCCCAAAGATCCCCATAGT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQKQSSN*PKDPHS
Trigger: ACTATGGGGATCTTTGGGCCAGTTTGAGGATTGCTT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTGGCTTATAATCTTTaGGCAGCTCTGCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLAYNL*AALLTS
Trigger: GGAAGTCAGCAGAGCTGCTCAAAGATTATAAGCCAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATATCACCCATGTTCTaGCCACTGTATGCATTAATA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLISPMF*PLYALI
Trigger: TATTAATGCATACAGTGGTCAGAACATGGGTGATAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATATCACCCATGTTCTaGCCACTGTATGCATTAATA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMISPMF*PLYALI
Trigger: TATTAATGCATACAGTGGTCAGAACATGGGTGATAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACCAACATTGCCTAAGTaGAGGATGCCAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQPTLPK*RMPASI
Trigger: AATACTTGCTGGCATCCTTCACTTAGGCAATGTTGG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQAFSSS*NSSGSI
Trigger: GATGCTACCAGAACTATTTCAAGATGATGAGAAGGC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAATGCGCCAGTACTTTTaGATGATGGTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQMRQYF*MMVAAL
Trigger: CAAGGCAGCAACCATCATTCAAAAGTACTGGCGCAT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTCTTCCTTCAGATTTaGTACCAGCTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQFFLQI*YQLLCF
Trigger: GAAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGGTTCCTCTGTCCTTaGTGGAATGTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQWFLCP*WNVFHF
Trigger: GAAATGGAAGACATTCCATCAAGGACAGAGGAACCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGAGCTTAAGGAACAATaGCATGTCCAGAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITELKEQ*HVQRYL
Trigger: AAGGTACCTCTGGACATGTCATTGTTCCTTAAGCTC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTCTTGACGCTTGAGTaGCTCATATTCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFLTLE*LIFQFC
Trigger: GCAGAACTGGAATATGAGTCACTCAAGCGTCAAGAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCTTGACGCTTGAGTaGCTCATATTCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFLTLE*LIFQFC
Trigger: GCAGAACTGGAATATGAGTCACTCAAGCGTCAAGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTCTGGCTCACCAGTTaGGACCTTAAGATGAGGACT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFWLTS*DLKMRT
Trigger: AGTCCTCATCTTAAGGTCTCAACTGGTGAGCCAGAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGGATGGGTTCATCAATaGTCTGTCCTGGGGATATGT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQGWVHQ*SVLGIC
Trigger: ACATATCCCCAGGACAGATCATTGATGAACCCATCC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGAGACAATCATTGGCTaGAGGATGTTCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITETIIG*RMFSNT
Trigger: GGTGTTAGAGAACATCCTTCAGCCAATGATTGTCTC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGAGACAATCATTGGCTaGAGGATGTTCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQETIIG*RMFSNT
Trigger: GGTGTTAGAGAACATCCTTCAGCCAATGATTGTCTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAAACCTGTCAAGGTTaGAAATATGCACTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKTCQG*KYALKE
Trigger: TTCCTTCAGTGCATATTTTCAACCTTGACAGGTTTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCAAAGTTTCAAGACCTaGATCGTGAATATTCTGACA +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLQSFKT*IVNILT
Trigger: TGTCAGAATATTCACGATTCAGGTCTTGAAACTTTG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCGAACCAAATGGCTATaGCTTAATTGTGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMRTKWL*LNCALK
Trigger: TTTCAATGCACAATTAAGTCATAGCCATTTGGTTCG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTGCATGTAGTAAGGTaGATGGGGAGGGGATTATTA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLHVVR*MGRGLL
Trigger: TAATAATCCCCTCCCCATTCACCTTACTACATGCAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACAAGTTGTAAGGGTGTaGGGTGAGTCTGCATGTAGT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQQVVRV*GESACS
Trigger: ACTACATGCAGACTCACCTCACACCCTTACAACTTG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTGTGCTTCTGCACCTaGCAAAAGAAGCATCAGATA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLCFCT*QKKHQI
Trigger: TATCTGATGCTTCTTTTGTCAGGTGCAGAAGCACAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTATCACTAAGCAGCTaGCATTACCCAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLSLSS*HYPEDP
Trigger: AGGATCCTCTGGGTAATGTCAGCTGCTTAGTGATAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGTAATACAACAGATTTaGACTTATAGCACGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLVIQQI*TYSTLS
Trigger: GGAAAGCGTGCTATAAGTTCAAATCTGTTGTATTAC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGCAAGCATTACAATACTaGGGAAACGTTAGTCATATG +
Preference number: 4 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLQALQY*GNVSHM
Trigger: CATATGACTAACGTTTCCTCAGTATTGTAATGCTTG...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCAAGCATTACAATACTaGGGAAACGTTAGTCATATG +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMQALQY*GNVSHM
Trigger: CATATGACTAACGTTTCCTCAGTATTGTAATGCTTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGAAATCCGATATGATTaGTACTTCTTAGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMEIRYD*YFLGSS
Trigger: AGATGACCCTAAGAAGTATCAATCATATCGGATTTC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGAACCACTCACAGTTaGAAAGTATCGCATGGCATA +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQRTTHS*KVSHGI
Trigger: TATGCCATGCGATACTTTGCAACTGTGAGTGGTTCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATGTGCCATCTCCTTTaGATCATCCACTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQMCHLL*IIHSFN
Trigger: ATTGAAGGAGTGGATGATGCAAAGGAGATGGCACAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATATTGTGCAGCTGTCTaGATCTCGGGATGTAAATCC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQYCAAV*ISGCKS
Trigger: GGATTTACATCCCGAGATGCAGACAGCTGCACAATA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTGAATGATGGTTGCTaGCTTGGTTCTGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLNDGC*LGSAQK
Trigger: TTTCTGCGCAGAACCAAGGCAGCAACCATCATTCAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTTTGAATGATGGTTaGTGCCTTGGTTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLLNDG*CLGSAQ
Trigger: CTGCGCAGAACCAAGGCAGCAACCATCATTCAAAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCAATGATGACTGCTTTGTaGTCACGGAGTATCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSMMTAL*SRSILR
Trigger: TCGCAAGATACTCCGTGAGCACAAAGCAGTCATCAT...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCATCAACTTTGCGCTaGAGCTGCATGATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSSTLR*SCMILF
Trigger: GAACAAGATCATGCAGCTGCAGCGCAAAGTTGATGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAACATTGTACCTGATCTaGATGCCTTTACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITTLYLI*MPLLQE
Trigger: CTCCTGGAGTAAAGGCATGCAGATCAGGTACAATGT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGTTAAGGATGAGTGTTaGTATAAAGATAACACAGCA +
Preference number: 4 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDVKDEC*YKDNTA
Trigger: TGCTGTGTTATCTTTATAGCAACACTCATCCTTAAC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGTATCCAAACCCTaGCAAACTTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITQVSKP*QTLCRA
Trigger: AGCTCTACACAAAGTTTGCCAGGGTTTGGATACCTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTCCAGACTTCCTCTaGATCAGGTATCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLPDFL*IRYPNP
Trigger: AGGGTTTGGATACCTGATCCAGAGGAAGTCTGGAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTTTCTTGTGCTCTTTaGCCATTTGGCCTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFSCAL*PFGLVC
Trigger: GCAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCTGTGACCCGCTTCTaGAGCTTAAGGAACAATGAC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSVTRF*SLRNND
Trigger: GTCATTGTTCCTTAAGCTCCAGAAGCGGGTCACAGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGATATGTTCTCCATCTaGCCCACTTCTAGTTCGCCA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQDMFSI*PTSSSP
Trigger: TGGCGAACTAGAAGTGGGCCAGATGGAGAACATATC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGGCAGTGTTCATTCTaGCGAGATGTGTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRQCSF*RDVLCF
Trigger: GAAGCACAACACATCTCGCCAGAATGAACACTGCCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTCACGGTACCTAGTTaGTTAAGGATGAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLTVPS*LRMSVA
Trigger: AGCAACACTCATCCTTAACCAACTAGGTACCGTGAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAACAGGCACTACACACTaGTCTTTCCATCAGAGAATG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITTGTTH*SFHQRM
Trigger: CATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAAGCAATCCTCAAACTaGCCCAAAGATCCCCATAGT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITKQSSN*PKDPHS
Trigger: ACTATGGGGATCTTTGGGCCAGTTTGAGGATTGCTT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGTTTCCTGTCTTTTTaGTTGAGACAACCTGCTACC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQCFLSF*LRQPAT
Trigger: GGTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp ACTGGCCCAAAGATCCCCATAGTCGGCAGAATCTTCTaGTACCTTCAAGAAAATGGTATACAGAATCATTTA +
Preference number: 4 (lower is better)
Translates to: TGPKIPIVGRIF*YLQENGIQNHL
Trigger: TAAATGATTCTGTATACCATTTTCTTGAAGGTACAAGAAGATTCTGCCGACTATGGGGATCTTTGGGCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
3UTR CAA 72 bp CGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTaGTATATTCCTTCCAGATTGGTTAGTTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: RSKSLRSFSVSE*YIPSRLVSFST
Trigger: TGTGGAGAAACTAACCAATCTGGAAGGAATATACAACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAACTCTCCACTTACGATaGTGGACTGATTTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQTLHLR*WTDFVH
Trigger: ATGAACGAAATCAGTCCATCATCGTAAGTGGAGAGT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAATGGAGAGCCTGATTaGCATTATCTACAATCCAGT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQNGEPD*HYLQSS
Trigger: ACTGGATTGTAGATAATGTCAATCAGGCTCTCCATT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGCAGAATGGAGAGCCTaGTTGACATTATCTACAATC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITAEWRA*LTLSTI
Trigger: GATTGTAGATAATGTCAATCAGGCTCTCCATTCTGC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCCTTCTCATCATCTTaGAATAGTTCTGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAFSSS*NSSGSI
Trigger: GATGCTACCAGAACTATTTCAAGATGATGAGAAGGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACATGTCGAACACACATaGACAGGATATATGCCGGTA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQHVEHT*TGYMPV
Trigger: TACCGGCATATATCCTGTTCATGTGTGTTCGACATG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCTACTTGTGCAGGTaGATCTGTAGGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCYLCR*ICRYLH
Trigger: ATGCAAATACCTACAGATTCACCTGCACAAGTAGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTAATCCTAAGGAATTaGCAGGCACTACACACTGGT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLILRN*QALHTG
Trigger: ACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTAATCCTAAGGAATTaGCAGGCACTACACACTGGT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLILRN*QALHTG
Trigger: ACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGATGCTGTTAGATTCTaGCACATTTGGTACGAACCA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQDAVRF*HIWYEP
Trigger: TGGTTCGTACCAAATGTGTCAGAATCTAACAGCATC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTGCATGTAGTAAGGTaGATGGGGAGGGGATTATTA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLHVVR*MGRGLL
Trigger: TAATAATCCCCTCCCCATTCACCTTACTACATGCAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATCAAAGCCTTAACCTaGGGAAAAGCTGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQIKALT*GKAAKR
Trigger: CCTTTTTGCAGCTTTTCCTCAGGTTAAGGCTTTGAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCCTGTCTTTTTGGTTaGGACAACCTGCTACCAATT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSCLFG*DNLLPI
Trigger: AATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCTTCAATCACAGGACTaGCTCCTTGTTTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLQSQD*LLVLCN
Trigger: ATTACACAAAACAAGGAGGCAGTCCTGTGATTGAAG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATGTGCCATCTCCTTTaGATCATCCACTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQMCHLL*IIHSFN
Trigger: ATTGAAGGAGTGGATGATGCAAAGGAGATGGCACAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGCCTAAGTGAAGGATaGCAGCAAGTATTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQCLSEG*QQVFGK
Trigger: TTTTCCGAATACTTGCTGGCATCCTTCACTTAGGCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAATGATGACTGCTTTGTaGTCACGGAGTATCTTGCGA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQMMTAL*SRSILR
Trigger: TCGCAAGATACTCCGTGAGCACAAAGCAGTCATCAT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGTTTGTATCGATCTaGATGTTCCTCAATGCATTT +
Preference number: 4 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLFVSI*MFLNAF
Trigger: AAATGCATTGAGGAACATGCAGATCGATACAAACAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCTCATATTCCAGTTCTaGACCTCTAATTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLIFQF*TSNLWS
Trigger: AGACCACAAATTAGAGGTGCAGAACTGGAATATGAG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTTCATGTTCCAGCATaGCTGAGACAATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFHVPA*LRQSLA
Trigger: AGCCAATGATTGTCTCAGGCATGCTGGAACATGAAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACATTGTACCTGATCTaGATGCCTTTACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTLYLI*MPLLQE
Trigger: CTCCTGGAGTAAAGGCATGCAGATCAGGTACAATGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGAACAACAAGGACTGTaGAAAGATTGGGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQEQQGL*KDWADG
Trigger: ACCATCAGCCCAATCTTTGCACAGTCCTTGTTGTTC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGAGGACTTTATCTCCTaGCTTATAATCTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQEDFIS*LIIFEQ
Trigger: CTGCTCAAAGATTATAAGCCAGGAGATAAAGTCCTC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGATTTCGTTCATCTCTaGCCATTTGCTTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQDFVHL*PFACKL
Trigger: AAGCTTACAAGCAAATGGCCAGAGATGAACGAAATC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCTCATCAAACGTGAATaGGAACTTGAAGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLIKRE*ELEVIR
Trigger: CCTAATGACTTCAAGTTCCCATTCACGTTTGATGAG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATATTCCTTCCAGATTaGTTAGTTTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQIFLPD*LVSPQG
Trigger: GCCTTGTGGAGAAACTAACCAATCTGGAAGGAATAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATATTCTTGTCATCCTTaGGTTGGATGGCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITYSCHP*VGWPLS
Trigger: AGAAAGAGGCCATCCAACCCAAGGATGACAAGAATA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATCAATGATCTGTCCTaGGGATATGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITINDLS*GYVLHL
Trigger: CAGATGGAGAACATATCCCCAGGACAGATCATTGAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAATCAATGATCTGTCCTaGGGATATGTTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQINDLS*GYVLHL
Trigger: CAGATGGAGAACATATCCCCAGGACAGATCATTGAT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGTCAATTTTTGCCTaGACATCACTTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLSIFA*TSLSDP
Trigger: CGGGTCTGAAAGTGATGTCCAGGCAAAAATTGACAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTGTCAATTTTTGCCTaGACATCACTTTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLSIFA*TSLSDP
Trigger: CGGGTCTGAAAGTGATGTCCAGGCAAAAATTGACAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCATTCAGAAGGTTCTaGTATCTCAGCCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSFRRF*YLSLSS
Trigger: TGATGAAAGGCTGAGATATCAGAACCTTCTGAATGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGTCATATTACTACATaGCTTTCCAGTGTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQCHITT*LSSVCY
Trigger: GTAGCAGACACTGGAAAGTCATGTAGTAATATGACA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGATGCTGTTAGATTCTaGCACATTTGGTACGAACCA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQDAVRF*HIWYEP
Trigger: TGGTTCGTACCAAATGTGTCAGAATCTAACAGCATC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCATTTGCTTACTTGTaGCACAGAGTCCCACTAACT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSFAYL*HRVPLT
Trigger: AGTTAGTGGGACTCTGTGTCACAAGTAAGCAAATGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGAACCACTCACAGTTaGAAAGTATCGCATGGCATA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRTTHS*KVSHGI
Trigger: TATGCCATGCGATACTTTGCAACTGTGAGTGGTTCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACTTCCCAAAACGGCTaGTATTATCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTSQNG*YYHSWL
Trigger: CAACCAGGAATGATAATAGCAGCCGTTTTGGGAAGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACTTCAATCACAGGACTaGCTCCTTGTTTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLQSQD*LLVLCN
Trigger: ATTACACAAAACAAGGAGGCAGTCCTGTGATTGAAG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACTCATATTCCAGTTCTaGACCTCTAATTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLIFQF*TSNLWS
Trigger: AGACCACAAATTAGAGGTGCAGAACTGGAATATGAG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACTCATATTCCAGTTCTaGACCTCTAATTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLIFQF*TSNLWS
Trigger: AGACCACAAATTAGAGGTGCAGAACTGGAATATGAG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTTCATGTTCCAGCATaGCTGAGACAATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFHVPA*LRQSLA
Trigger: AGCCAATGATTGTCTCAGGCATGCTGGAACATGAAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTACTGCAAAGATATGTaGATCCATATCACCCATGTT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQYCKDM*IHITHV
Trigger: AACATGGGTGATATGGATCCACATATCTTTGCAGTA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGATTTCGTTCATCTCTaGCCATTTGCTTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQDFVHL*PFACKL
Trigger: AAGCTTACAAGCAAATGGCCAGAGATGAACGAAATC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCCTGGAATACCACTCTaGATTTCTCTAAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQPGIPL*ISLKDK
Trigger: CTTATCTTTTAGAGAAATCCAGAGTGGTATTCCAGG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACTCATCAAACGTGAATaGGAACTTGAAGTCATTAGG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLIKRE*ELEVIR
Trigger: CCTAATGACTTCAAGTTCCCATTCACGTTTGATGAG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATATTCCTTCCAGATTaGTTAGTTTCTCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITIFLPD*LVSPQG
Trigger: GCCTTGTGGAGAAACTAACCAATCTGGAAGGAATAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGTCATATTACTACATaGCTTTCCAGTGTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQCHITT*LSSVCY
Trigger: GTAGCAGACACTGGAAAGTCATGTAGTAATATGACA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATATCTTAGCACTAGGTaGTATCTAGTGAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQYLSTR*YLVKTH
Trigger: ATGGGTTTTCACTAGATATCACCTAGTGCTAAGATA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR TCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGAAATCCGATATGATTaGTACTTCTTAGGGTCATCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQEIRYD*YFLGSS
Trigger: AGATGACCCTAAGAAGTATCAATCATATCGGATTTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAAGGGAAATCCGATATaGTTGATACTTCTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQKGNPI*LILLRV
Trigger: GACCCTAAGAAGTATCAATCATATCGGATTTCCCTT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTCAATCACAGGACTaGCTCCTTGTTTTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLQSQD*LLVLCN
Trigger: ATTACACAAAACAAGGAGGCAGTCCTGTGATTGAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACACCAATAAAAGAGTaGTGTTTGACAGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTPIKE*CLTAEW
Trigger: CCATTCTGCTGTCAAACAGCACTCTTTTATTGGTGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACATTCTTGCATGTTTaGTTTCTGTCACTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTFLHV*FLSLST
Trigger: TGTGCTGAGTGACAGAAAGCAAACATGCAAGAATGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCTCTAACACATTCTTaGATGTTTGCTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSLTHS*MFAFCH
Trigger: GTGACAGAAAGCAAACATGCAAGAATGTGTTAGAGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTGTTTGTATCGATCTaGATGTTCCTCAATGCATTT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLFVSI*MFLNAF
Trigger: AAATGCATTGAGGAACATGCAGATCGATACAAACAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAACCTGAGGAAAAGCTaGAAAAAGGGAAATTACTTT +
Preference number: 4 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQNLRKS*KKGNYF
Trigger: AAAGTAATTTCCCTTTTTGCAGCTTTTCCTCAGGTT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTACTTTCAACAGGATaGACTAGTTTTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLLSTG*TSFGSV
Trigger: AACAGAGCCAAAACTAGTGCATCCTGTTGAAAGTAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTGGTTGAGACAACCTaGTACCAATTAATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLVETT*YQLMPK
Trigger: TTTGGGCATTAATTGGTAGCAGGTTGTCTCAACCAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGTCTTTGGATCTAGATaGTATTCCAAATCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQVFGSR*YSKSFP
Trigger: AGGAAAGGATTTGGAATACCATCTAGATCCAAAGAC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATACTGCAAAGATATGTaGATCCATATCACCCATGTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITYCKDM*IHITHV
Trigger: AACATGGGTGATATGGATCCACATATCTTTGCAGTA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGATTTCGTTCATCTCTaGCCATTTGCTTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQDFVHL*PFACKL
Trigger: AAGCTTACAAGCAAATGGCCAGAGATGAACGAAATC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACCTGGAATACCACTCTaGATTTCTCTAAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQPGIPL*ISLKDK
Trigger: CTTATCTTTTAGAGAAATCCAGAGTGGTATTCCAGG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTTGTCTTACCAAACTaGTATTTGTCCTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFVLPN*YLSLSS
Trigger: ACTGGACAAGGACAAATACCAGTTTGGTAAGACAAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAACACTTTCACAATCTaGGCAGTAGTTAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQNTFTI*AVVKAL
Trigger: CAATGCTTTAACTACTGCCCAGATTGTGAAAGTGTT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR TCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAAAACCTGTCAAGGTTaGAAATATGCACTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQKTCQG*KYALKE
Trigger: TTCCTTCAGTGCATATTTTCAACCTTGACAGGTTTT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTTCTGACCACTGTATaGATTAATAATATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVLTTV*INNIFS
Trigger: GGAGAAGATATTATTAATGCATACAGTGGTCAGAAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCTCTAACACATTCTTaGATGTTTGCTTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSLTHS*MFAFCH
Trigger: GTGACAGAAAGCAAACATGCAAGAATGTGTTAGAGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGTTAAGGATGAGTGTTaGTATAAAGATAACACAGCA +
Preference number: 4 (lower is better)
Translates to: MSVAIKITQHERAYLCFQVKDEC*YKDNTA
Trigger: TGCTGTGTTATCTTTATAGCAACACTCATCCTTAAC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAACCTGAGGAAAAGCTaGAAAAAGGGAAATTACTTT +
Preference number: 4 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITNLRKS*KKGNYF
Trigger: AAAGTAATTTCCCTTTTTGCAGCTTTTCCTCAGGTT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGTCTTTGGATCTAGATaGTATTCCAAATCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQVFGSR*YSKSFP
Trigger: AGGAAAGGATTTGGAATACCATCTAGATCCAAAGAC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATACTGCAAAGATATGTaGATCCATATCACCCATGTT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQYCKDM*IHITHV
Trigger: AACATGGGTGATATGGATCCACATATCTTTGCAGTA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCAAGGTTGAAAATATaGACTGAAGGAATCAGATCT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSRLKI*TEGIRS
Trigger: AGATCTGATTCCTTCAGTGCATATTTTCAACCTTGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR GCA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAACCTGAGGAAAAGCTaGAAAAAGGGAAATTACTTT +
Preference number: 4 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQNLRKS*KKGNYF
Trigger: AAAGTAATTTCCCTTTTTGCAGCTTTTCCTCAGGTT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS CCA 90 bp CAGCCGGGTGATCTCGTGCTGCAGGCTGGCCTCAATGCGGGCCTCTaGGGGCAGCTGCAGGTTCTGGGCCAGCAGCTGCTGCTGTCGGTT +
Preference number: 5 (lower is better)
Translates to: QPGDLVLQAGLNAGL*GQLQVLGQQLLLSV
Trigger: AACCGACAGCAGCAGCTGCTGGCCCAGAACCTGCAGCTGCCCCCAGAGGCCCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356338.10
ENST00000399228.5
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS TCA 90 bp CCTTGCGGACATCAAGCTCCTCGCTCACAGAGGTCAGCTGCTCCATaGGGACACGGTAGGCAGGTGCACCTGGGGCGGTCACCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: PCGHQAPRSQRSAAP*GHGRQVHLGRSPLG
Trigger: CCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTCCTCATGGAGCAGCTGACCTCTGTGAGCGAGGAGCTTGATGTCCGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399228.5
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 90 bp CACAGAGGTCAGCTGCTCCATGAGGACACGGTAGGCAGGTGCACCTaGGGCGGTCACCTCTGGGGCACTTTTCTCACTGAGGGCCTTGCG +
Preference number: 5 (lower is better)
Translates to: HRGQLLHEDTVGRCT*GGHLWGTFLTEGLA
Trigger: CGCAAGGCCCTCAGTGAGAAAAGTGCCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTCCTCATGGAGCAGCTGACCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399228.5
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACTGGCCTGGTCTGCCTTaGGTGGGCTTTGCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDWPGLP*VGFAGV
Trigger: AACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCCA...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS GCA 90 bp TGTTCCATCAAATCCAAGTTTTCGTTGGTCAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATGCGGGCCTCTGGGGGCAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: CSIKSKFSLVSRVIS*CRLASMRASGGSCR
Trigger: CCTGCAGCTGCCCCCAGAGGCCCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCTGACCAACGAAAACTTGGATTTGATGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
CDS CCA 90 bp TTCAGGCTCTGGATCTCCCCACGGAGGGCCTCGGCCTCATTCTCATaGCTCCTCTTCTGTGACTGCAGCTGGGATTCCAGGAGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FRLWISPRRASASFS*LLFCDCSWDSRSLL
Trigger: CAACAGGCTCCTGGAATCCCAGCTGCAGTCACAGAAGAGGAGCCATGAGAATGAGGCCGAGGCCCTCCGTGGGGAGATCCAGAGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399228.5
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGGCACCCAGTGACTaGGGCTCCCCTGTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGKAPSD*GSPVLR
Trigger: CCTCAGCACAGGGGAGCCCAAGTCACTGGGTGCCTT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGAGCGAGCCTCGATTTaGAGCTTCTTTAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDERASI*SFFSSR
Trigger: GCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCTC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS CCA 90 bp TTCAGGCTCTGGATCTCCCCACGGAGGGCCTCGGCCTCATTCTCATaGCTCCTCTTCTGTGACTGCAGCTGGGATTCCAGGAGCCTATTT +
Preference number: 5 (lower is better)
Translates to: FRLWISPRRASASFS*LLFCDCSWDSRSLF
Trigger: AAATAGGCTCCTGGAATCCCAGCTGCAGTCACAGAAGAGGAGCCATGAGAATGAGGCCGAGGCCCTCCGTGGGGAGATCCAGAGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000553916.5
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAAACCCTGGCAAACTTaGTGTAGAGCTCCGACGCAG +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEKPWQT*CRAPTQ
Trigger: CTGCGTCGGAGCTCTACACAAAGTTTGCCAGGGTTT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCATGCTTGGGAGGTATaGTGCAGCTGTCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEHAWEV*CSCLHL
Trigger: GAGATGCAGACAGCTGCACAATACCTCCCAAGCATG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGGCCTGGTCTGCCTTaGGTGGGCTTTGCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGWPGLP*VGFAGV
Trigger: AACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACAGGTCTTTCCGGAGCTaGGCAATTTCTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDRSFRS*AISSCR
Trigger: TCTGCAGGAAGAAATTGCCAAGCTCCGGAAAGACCT...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGCTGCTGCTGTCGGTaGTTCTCCTCCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSCCCR*FSSFRL
Trigger: GAGCCTGAAGGAGGAGAACAACCGACAGCAGCAGCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTCCGCAGGAGAAGGTaGTTCAGGGTGATGGCCCCT +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASFRRRR*FRVMAP
Trigger: AGGGGCCATCACCCTGAACAACCTTCTCCTGCGGAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS CCA 90 bp AGGTGCCCTCATCGGCGATACTGGAGGTTCGCTTTCTCAACCCTGTaGGCTTCACCCCAGACACGCCCTGAATCGTTTCATGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RCPHRRYWRFAFSTL*ASPQTRPESFHVPA
Trigger: TGCTGGAACATGAAACGATTCAGGGCGTGTCTGGGGTGAAGCCCACAGGGTTGAGAAAGCGAACCTCCAGTATCGCCGATGAGGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACCAGAACCACTCACAGTaGCAAAGTATCGCATGGCAT +
Preference number: 5 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDQNHSQ*QSIAWH
Trigger: ATGCCATGCGATACTTTGCAACTGTGAGTGGTTCTG...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAGCTTGGAGATGGGCTaGATGTATGTCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPESLEMG*MYVSVA
Trigger: TGCCACAGAGACATACATCAAGCCCATCTCCAAGCT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGCAGCTCGTCTAATCTaGTACCTCCTGCGGACCACA +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASAARLI*YLLRTT
Trigger: TGTGGTCCGCAGGAGGTACAAGATTAGACGAGCTGC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCTTCTTTAGCTCACGCTaGGCCATCATCCGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALFFSSR*AIIRLK
Trigger: CTTCAGGCGGATGATGGCCAAGCGTGAGCTAAAGAA...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTCTGCTCATCAACTTaGCGCTGCAGCTGCATGATC +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEFCSST*RCSCMI
Trigger: GATCATGCAGCTGCAGCGCAAAGTTGATGAGCAGAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGATTCAGGGTGCACGTaGAGTCGTGCTACACAGGAT +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVDSGCT*SRATQD
Trigger: ATCCTGTGTAGCACGACTCAACGTGCACCCTGAATC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACACGCACACACTGACTaGTATATGGCCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGHAHTD*YMACPV
Trigger: CACTGGGCAGGCCATATACAAGTCAGTGTGTGCGTG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS TCA 90 bp ATCTGCTTGACCACCTGCTTGATCAGTTCAGGGTCCATGCCATGCTaGCACATGACCGAGTGGAAGGAGTTGAGCTGCCGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: ICLTTCLISSGSMPC*HMTEWKELSCRRME
Trigger: CTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGGTCATGTGTCAGCATGGCATGGACCCTGAACTGATCAAGCAGGTGGTCAAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTAAACCCTGGCAAACTTaGTGTAGAGCTCCGACGCAG +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASKPWQT*CRAPTQ
Trigger: CTGCGTCGGAGCTCTACACAAAGTTTGCCAGGGTTT...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGCAGCTCCTTGGTCTTaGGATCTAGATGGTATTCCA +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEAAPWS*DLDGIP
Trigger: TGGAATACCATCTAGATCCAAAGACCAAGGAGCTGC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCAGAACCACTCACAGTaGCAAAGTATCGCATGGCAT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEQNHSQ*QSIAWH
Trigger: ATGCCATGCGATACTTTGCAACTGTGAGTGGTTCTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACATGCTTGGGAGGTATaGTGCAGCTGTCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGHAWEV*CSCLHL
Trigger: GAGATGCAGACAGCTGCACAATACCTCCCAAGCATG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACGTGCCTTTAGGCATCTaGCATTCCTCATCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDVPLGI*HSSSSK
Trigger: TTTACTGGATGAGGAATGCAAGATGCCTAAAGGCAC...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTTTTCTTGTGCTCTTaGGCCATTTGGCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVFLCS*AIWPGL
Trigger: CAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEHAPVL*NDGCCL
Trigger: AAGGCAGCAACCATCATTCAAAAGTACTGGCGCATG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTCTTTAGCTCACGCTaGGCCATCATCCGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGFFSSR*AIIRLK
Trigger: CTTCAGGCGGATGATGGCCAAGCGTGAGCTAAAGAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGAGCGAGCCTCGATTTaGAGCTTCTTTAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASERASI*SFFSSR
Trigger: GCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCTC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGCAGCTGCATGATCTaGTTCTCCATGCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASCSCMI*FSMPMC
Trigger: GCACATCGGCATGGAGAACAAGATCATGCAGCTGCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGCAGCTGCATGATCTaGTTCTCCATGCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGCSCMI*FSMPMC
Trigger: GCACATCGGCATGGAGAACAAGATCATGCAGCTGCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTCTCACTGAGGGCCTaGCGCAACTCATTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVFSLRA*RNSFSS
Trigger: TGAGCTAAATGAGTTGCGCAAGGCCCTCAGTGAGAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAAATCCAAGTTTTCGTaGGTCAGCCGGGTGATCTCG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVKSKFS*VSRVIS
Trigger: CGAGATCACCCGGCTGACCAACGAAAACTTGGATTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356338.10
ENST00000399231.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTCTTTCCTGGGAATGTaGACTGGTCGGATGGGTTCA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVSFLGM*TGRMGS
Trigger: TGAACCCATCCGACCAGTCAACATTCCCAGGAAAGA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTCAGCCAGGTCAAAATaGGTGAGGCAGTGTTCATTC +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPESARSK*VRQCSF
Trigger: GAATGAACACTGCCTCACCAATTTTGACCTGGCTGA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATACCGAGTGGAAGGAGTaGAGCTGCCGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYTEWKE*SCRRME
Trigger: CTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGGT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGCTTGACCACCTGCTaGATCAGTTCAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGCLTTC*ISSGSM
Trigger: CATGGACCCTGAACTGATCAAGCAGGTGGTCAAGCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGCTTGACCACCTGCTaGATCAGTTCAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASCLTTC*ISSGSM
Trigger: CATGGACCCTGAACTGATCAAGCAGGTGGTCAAGCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGATTCAGGGTGCACGTaGAGTCGTGCTACACAGGAT +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASDSGCT*SRATQD
Trigger: ATCCTGTGTAGCACGACTCAACGTGCACCCTGAATC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATCATTTACTGGGCCTaGGGGTTCCCTGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVIIYWA*GFPGYK
Trigger: CTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAAGAGAGAAAGGGCATaGTGTGAGGACTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEKRERA*CEDFSG
Trigger: TCCTGAGAAGTCCTCACACAATGCCCTTTCTCTCTT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCCTGGCGCTGAGCACTaGGTCTCCTTAAAACAAGTA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVPGAEH*VSLKQV
Trigger: TACTTGTTTTAAGGAGACCAAGTGCTCAGCGCCAGG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGCCCAAACAGAGTATaGCATCCTCCCAGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASCPNRV*HPPREH
Trigger: GTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCTGGCTCTGAGACTGTaGCTGCCCCACAGTTCTAAT +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLALRL*LPHSSN
Trigger: ATTAGAACTGTGGGGCAGCAACAGTCTCAGAGCCAG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGGCATGAACTCATTTTaGCGCAACACTGTTAGCGCA +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEGMNSF*RNTVSA
Trigger: TGCGCTAACAGTGTTGCGCAAAAATGAGTTCATGCC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGCAGCTCCTTGGTCTTaGGATCTAGATGGTATTCCA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVAAPWS*DLDGIP
Trigger: TGGAATACCATCTAGATCCAAAGACCAAGGAGCTGC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTGGCCTGGTCTGCCTTaGGTGGGCTTTGCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYWPGLP*VGFAGV
Trigger: AACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCCA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGTTTTCTTGTGCTCTTaGGCCATTTGGCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGVFLCS*AIWPGL
Trigger: CAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAAC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCACATTCTTGCATGTTaGCTTTCTGTCACTCAGCAC +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEHILAC*LSVTQH
Trigger: GTGCTGAGTGACAGAAAGCAAACATGCAAGAATGTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCAGGCAGCTCTCAGTTaGTCAGCTCTCAATTTTTCT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEQAALS*SALNFS
Trigger: AGAAAAATTGAGAGCTGACAAACTGAGAGCTGCCTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVHAPVL*NDGCCL
Trigger: AAGGCAGCAACCATCATTCAAAAGTACTGGCGCATG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTCTGCTCATCAACTTaGCGCTGCAGCTGCATGATC +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASFCSST*RCSCMI
Trigger: GATCATGCAGCTGCAGCGCAAAGTTGATGAGCAGAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAGGTCTTTCCGGAGCTaGGCAATTTCTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGRSFRS*AISSCR
Trigger: TCTGCAGGAAGAAATTGCCAAGCTCCGGAAAGACCT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATATATTCAGACTCGTaGCTGCTGTGGGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVIYSDS*LLWVES
Trigger: AGACTCCACCCACAGCAGCAACGAGTCTGAATATAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTACCTTCTTCTCACTaGGTTCCTCTGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVPSSH*VPLSLM
Trigger: CATCAAGGACAGAGGAACCAAGTGAGAAGAAGGTAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTATTCTTGTCATCCTaGGGTTGGATGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVFLSS*GWMASF
Trigger: GAAAGAGGCCATCCAACCCAAGGATGACAAGAATAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTCTTTCCTGGGAATGTaGACTGGTCGGATGGGTTCA +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASSFLGM*TGRMGS
Trigger: TGAACCCATCCGACCAGTCAACATTCCCAGGAAAGA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAATCCTGGAATCAAATaGACTGCTACACCACGTGGC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVNPGIK*TATPRG
Trigger: GCCACGTGGTGTAGCAGTCAATTTGATTCCAGGATT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTGCCTGAGACAATCATaGGCTGAAGGATGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPECLRQS*AEGCSL
Trigger: TAGAGAACATCCTTCAGCCAATGATTGTCTCAGGCA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAAGAGAGAAAGGGCATaGTGTGAGGACTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVKRERA*CEDFSG
Trigger: TCCTGAGAAGTCCTCACACAATGCCCTTTCTCTCTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCTTAAAACAAGTAACTaGGTACGCAGCACTTGCTCG +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPELKTSN*VRSTCS
Trigger: CGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCTGTTTCCTGTCTTTTaGGTTGAGACAACCTGCTAC +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPELFPVF*VETTCY
Trigger: GTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACAG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS CCA 90 bp TTTCAGACCCGTGAAATGAAGCCCAGGCCGAGGCTGGCTGGAATCTaGATGGTTTCTAGTGCGAGGGAAGATGGGTTGAAAGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: FQTREMKPRPRLAGI*MVSSAREDGLKGKV
Trigger: CACCTTTCCTTTCAACCCATCTTCCCTCGCACTAGAAACCATCCAGATTCCAGCCAGCCTCGGCCTGGGCTTCATTTCACGGGTCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCAAACCCTGGCAAACTTaGTGTAGAGCTCCGACGCAG +
Preference number: 5 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLKPWQT*CRAPTQ
Trigger: CTGCGTCGGAGCTCTACACAAAGTTTGCCAGGGTTT...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GATGATGGCATGCATGCTCCTCTTGTAGTGTGTGCGGGCCAGCCAGCCCCGGACCACAGGACTGCCTCCTaGTTTTGTGTAATTAAAGTT +
Preference number: 5 (lower is better)
Translates to: DDGMHAPLVVCAGQPAPDHRTAS*FCVIKV
Trigger: AACTTTAATTACACAAAACAAGGAGGCAGTCCTGTG...GTCCGGGGCTGGCTGGCCCGCACACACTACAAGAGGAGCATGCATGCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTAT +
Preference number: 5 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFFVACS*EMGLMY
Trigger: ATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGCACTGGTATTCCACTTaGTCAGCAAAATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAAGTGGAATACCAGTG...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTGCAGCTGCATGATCTaGTTCTCCATGCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFCSCMI*FSMPMC
Trigger: GCACATCGGCATGGAGAACAAGATCATGCAGCTGCA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATATATTCAGACTCGTaGCTGCTGTGGGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGIYSDS*LLWVES
Trigger: AGACTCCACCCACAGCAGCAACGAGTCTGAATATAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGTACCTTCTTCTCACTaGGTTCCTCTGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASVPSSH*VPLSLM
Trigger: CATCAAGGACAGAGGAACCAAGTGAGAAGAAGGTAC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATATGAGGACTTCCTCCTaGCGGACATCAAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYMRTSS*RTSSSS
Trigger: CGAGGAGCTTGATGTCCGCAAGGAGGAAGTCCTCAT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCTATTCATCAGATTCTaGTCACGCAGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLFIRF*SRSHSS
Trigger: GGAAGAATGGCTGCGTGACAAGAATCTGATGAATAG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGATTAATCCTAAGGAATaGACAGGCACTACACACTGG +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEINPKE*TGTTHW
Trigger: CCAGTGTGTAGTGCCTGTCAATTCCTTAGGATTAAT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTACCCAGAGGATCCTaGACTATGCCTGCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASLPRGS*TMPAKE
Trigger: TTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCTGTTTCCTGTCTTTTaGGTTGAGACAACCTGCTAC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVLFPVF*VETTCY
Trigger: GTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACAG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTCATCTCTGGCCATTaGCTTGTAAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGFISGH*LVSFFS
Trigger: GCTGAAGAAGCTTACAAGCAAATGGCCAGAGATGAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCACAGGACTGCCTCCTaGTTTTGTGTAATTAAAGTT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEHRTAS*FCVIKV
Trigger: AACTTTAATTACACAAAACAAGGAGGCAGTCCTGTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTATGTGCCATCTCCTTaGCATCATCCACTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASYVPSP*HHPLLQ
Trigger: TTGAAGGAGTGGATGATGCAAAGGAGATGGCACATA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCAGCTTGGAGATGGGCTaGATGTATGTCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFSLEMG*MYVSVA
Trigger: TGCCACAGAGACATACATCAAGCCCATCTCCAAGCT...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAATAAAAGAGTGCTGTTaGACAGCAGAATGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGIKECC*TAEWRA
Trigger: GGCTCTCCATTCTGCTGTCAAACAGCACTCTTTTAT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCACTGGTATTCCACTTaGTCAGCAAAATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAAGTGGAATACCAGTG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGGTTTTCTTGTGCTCTTaGGCCATTTGGCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPVFLCS*AIWPGL
Trigger: CAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAAC...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACACATTCTTGCATGTTaGCTTTCTGTCACTCAGCAC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGHILAC*LSVTQH
Trigger: GTGCTGAGTGACAGAAAGCAAACATGCAAGAATGTG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGAACTGGTATTTGTCCTaGTCCAGTATCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPENWYLS*SSISFS
Trigger: AGAGAAACTGATACTGGACAAGGACAAATACCAGTT...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTACCAAACTGGTATTaGTCCTTGTCCAGTATCAGT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPELPNWY*SLSSIS
Trigger: ACTGATACTGGACAAGGACAAATACCAGTTTGGTAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGCAGCTCGTCTAATCTaGTACCTCCTGCGGACCACA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCAARLI*YLLRTT
Trigger: TGTGGTCCGCAGGAGGTACAAGATTAGACGAGCTGC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCTGCTCACGGAGTATCTaGCGATACCTATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLCSRSI*RYLFLA
Trigger: GGCCAGAAATAGGTATCGCAAGATACTCCGTGAGCA...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTCTTTAGCTCACGCTaGGCCATCATCCGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYFFSSR*AIIRLK
Trigger: CTTCAGGCGGATGATGGCCAAGCGTGAGCTAAAGAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGAGCGAGCCTCGATTTaGAGCTTCTTTAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYERASI*SFFSSR
Trigger: GCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCTC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGTTCTGCTCATCAACTTaGCGCTGCAGCTGCATGATC +
Preference number: 5 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPFCSST*RCSCMI
Trigger: GATCATGCAGCTGCAGCGCAAAGTTGATGAGCAGAA...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTGCTCTGTTTCTTGTTaGTATCGATCTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVCSVSC*YRSACS
Trigger: GGAACATGCAGATCGATACAAACAAGAAACAGAGCA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTCAGCTGCTCTGTTTCTaGTTTGTATCGATCTGCATG +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASQLLCF*FVSICM
Trigger: CATGCAGATCGATACAAACAAGAAACAGAGCAGCTG...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGCCAGCCAGCCCCGGACTCGCTTCTGAATGATGACTGCTTTGTGCTCACGGAGTTTCTTCCTTCAGATTaGATACCAGCTGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: GQPAPDSLLNDDCFVLTEFLPSD*IPAALF
Trigger: AAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAAA...CTCCGTGAGCACAAAGCAGTCATCATTCAGAAGCGAGTCCGGGGCTGGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAGGGTCATCTCTTCCTaGAGGTCATCATATCTTTCT +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVRVISS*RSSYLS
Trigger: AGAAAGATATGATGACCTCAAGGAAGAGATGACCCT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGTTGTGGAATCTGTCATaGTATTCTTGTCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPELWNLS*YSCHPW
Trigger: CCAAGGATGACAAGAATACAATGACAGATTCCACAA...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGTCGGCAGAATCTTCTaGTACCTTCAAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVVGRIF*YLQENG
Trigger: ACCATTTTCTTGAAGGTACAAGAAGATTCTGCCGAC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGACTGTTTCCTGTCTTTTaGGTTGAGACAACCTGCTAC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLFPVF*VETTCY
Trigger: GTAGCAGGTTGTCTCAACCAAAAAGACAGGAAACAG...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTGGCTCTGAGACTGTaGCTGCCCCACAGTTCTAAT +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLALRL*LPHSSN
Trigger: ATTAGAACTGTGGGGCAGCAACAGTCTCAGAGCCAG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCACCTTTTCCTCCACATaGGCCTCACTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCTFSST*ASLAEP
Trigger: TGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGCACAGGACTGCCTCCTaGTTTTGTGTAATTAAAGTT +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVHRTAS*FCVIKV
Trigger: AACTTTAATTACACAAAACAAGGAGGCAGTCCTGTG...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGAACGTGAATGGGAACTaGAAGTCATTAGGCTTGATA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVNVNGN*KSLGLI
Trigger: TATCAAGCCTAATGACTTCAAGTTCCCATTCACGTT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCTTACCAAACTGGTATTaGTCCTTGTCCAGTATCAGT +
Preference number: 5 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALLPNWY*SLSSIS
Trigger: ACTGATACTGGACAAGGACAAATACCAGTTTGGTAA...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGCACGGAAAAAGATCTTaGTCTTACCAAACTGGTATT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEHGKRS*SYQTGI
Trigger: AATACCAGTTTGGTAAGACAAAGATCTTTTTCCGTG...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCCATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLHAPVL*NDGCCL
Trigger: AAGGCAGCAACCATCATTCAAAAGTACTGGCGCATG...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTGCTCACGGAGTATCTaGCGATACCTATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYCSRSI*RYLFLA
Trigger: GGCCAGAAATAGGTATCGCAAGATACTCCGTGAGCA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCTTTAGCTCACGCTaGGCCATCATCCGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFFSSR*AIIRLK
Trigger: CTTCAGGCGGATGATGGCCAAGCGTGAGCTAAAGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGAGCGAGCCTCGATTTaGAGCTTCTTTAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCERASI*SFFSSR
Trigger: GCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCTC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTATATTCCTTCCAGATaGGTTAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVYIPSR*VSFSTR
Trigger: CCTTGTGGAGAAACTAACCAATCTGGAAGGAATATA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TTTCTCAGCAGCCACCCTCGGATGGTCTTCTGGATCCGGATGCAGGCAGCTCTCTATATTCCTTCCAGATaGGTTAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: FLSSHPRMVFWIRMQAALYIPSR*VSFSTR
Trigger: CCTTGTGGAGAAACTAACCAATCTGGAAGGAATATA...GAGAGCTGCCTGCATCCGGATCCAGAAGACCATCCGAGGGTGGCTGCTGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTGCTCTGTTTCTTGTTaGTATCGATCTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASCSVSC*YRSACS
Trigger: GGAACATGCAGATCGATACAAACAAGAAACAGAGCA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATGCTCTGTTTCTTGTTaGTATCGATCTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGCSVSC*YRSACS
Trigger: GGAACATGCAGATCGATACAAACAAGAAACAGAGCA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGCACCTGCTCCTCCTaGCGGTCCAGCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLSTCSS*RSSSSC
Trigger: GCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGCT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCTGTCATTGTATTCTaGTCATCCTTGGGTTGGATG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSVIVF*SSLGWM
Trigger: CATCCAACCCAAGGATGACAAGAATACAATGACAGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGTTCTTAACAAGTTTTaGCTCATCCTCCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEVLNKF*LILLLV
Trigger: TACAAGAAGGAGGATGAGCAAAAACTTGTTAAGAAC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACACCGAGTGGAAGGAGTaGAGCTGCCGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDTEWKE*SCRRME
Trigger: CTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGGT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTCAACAATAGCCACTTaGTCTAATCCTACCCCTAAA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVSTIAT*SNPTPK
Trigger: TTTAGGGGTAGGATTAGACAAAGTGGCTATTGTTGA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGAAAACCTGTCAAGGTaGAAAATATGCACTGAAGGA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVENLSR*KICTEG
Trigger: TCCTTCAGTGCATATTTTCAACCTTGACAGGTTTTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTCTAGAAGGGAAGGGAGCAAGGGTTAAGGCGGCCCTCACAGCACAGCCTGAGGAGAATTTGATGCAATaGGTAGTGTTTCTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: ALEGKGARVKAALTAQPEENLMQ*VVFLVD
Trigger: ATCAACCAGAAACACTACCAATTGCATCAAATTCTC...CTCAGGCTGTGCTGTGAGGGCCGCCTTAACCCTTGCTCCCTTCCCTTCTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCCTGGCGCTGAGCACTaGGTCTCCTTAAAACAAGTA +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYPGAEH*VSLKQV
Trigger: TACTTGTTTTAAGGAGACCAAGTGCTCAGCGCCAGG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS TCA 90 bp CCTCGAGGTGAAGCAGGAGGACTTTATCTCCTGGCTTATAATCTTTaGGCAGCTCTGCTGACTTCCAGACTTCCTCTGGATCAGGTATCC +
Preference number: 5 (lower is better)
Translates to: PRGEAGGLYLLAYNL*AALLTSRLPLDQVS
Trigger: GGATACCTGATCCAGAGGAAGTCTGGAAGTCAGCAGAGCTGCTCAAAGATTATAAGCCAGGAGATAAAGTCCTCCTGCTTCACCTCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
ENST00000556196.5
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTCGGAAAATTCCCATTaGATGAGATTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVSENSH*MRFTNS
Trigger: GGAATTAGTGAATCTCATCAAATGGGAATTTTCCGA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGCTTGGAGATGGGCTaGATGTATGTCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSLEMG*MYVSVA
Trigger: TGCCACAGAGACATACATCAAGCCCATCTCCAAGCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGGAGTGTCCATGGAATTaGTTCCTTCATATATTCTTC +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVECPWN*FLHIFF
Trigger: GAAGAATATATGAAGGAACAAATTCCATGGACACTC...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTGCCCCACTGTTTTCTaGTGCTCTTTGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCCPTVF*CSLAIW
Trigger: CCAAATGGCCAAAGAGCACAAGAAAACAGTGGGGCA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAACGTGAATGGGAACTaGAAGTCATTAGGCTTGATA +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGNVNGN*KSLGLI
Trigger: TATCAAGCCTAATGACTTCAAGTTCCCATTCACGTT...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCCACATTCTTGCATGTTaGCTTTCTGTCACTCAGCAC +
Preference number: 5 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFHILAC*LSVTQH
Trigger: GTGCTGAGTGACAGAAAGCAAACATGCAAGAATGTG...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGTTCTCTAACACATTCTaGCATGTTTGCTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVFSNTF*HVCFLS
Trigger: TGACAGAAAGCAAACATGCAAGAATGTGTTAGAGAA...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATTACCAAACTGGTATTaGTCCTTGTCCAGTATCAGT +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGLPNWY*SLSSIS
Trigger: ACTGATACTGGACAAGGACAAATACCAGTTTGGTAA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATATGATGGTTGCTGCCTaGGTTCTGCGCAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYMMVAA*VLRRNL
Trigger: TAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCAT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTGCTCACGGAGTATCTaGCGATACCTATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCCSRSI*RYLFLA
Trigger: GGCCAGAAATAGGTATCGCAAGATACTCCGTGAGCA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCTGCTCATCAACTTaGCGCTGCAGCTGCATGATC +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFCSST*RCSCMI
Trigger: GATCATGCAGCTGCAGCGCAAAGTTGATGAGCAGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATATATTCCTTCCAGATaGGTTAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGYIPSR*VSFSTR
Trigger: CCTTGTGGAGAAACTAACCAATCTGGAAGGAATATA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTTTTCTTCCTTCAGATTaGATACCAGCTGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASFLPSD*IPAALF
Trigger: AAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAAA...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCTCACTGAGGGCCTaGCGCAACTCATTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFSLRA*RNSFSS
Trigger: TGAGCTAAATGAGTTGCGCAAGGCCCTCAGTGAGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGTATTCTTGTCATCCTaGGGTTGGATGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYVFLSS*GWMASF
Trigger: GAAAGAGGCCATCCAACCCAAGGATGACAAGAATAC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACAGCTGCTGCTGTCGGTaGTTCTCCTCCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDSCCCR*FSSFRL
Trigger: GAGCCTGAAGGAGGAGAACAACCGACAGCAGCAGCT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CACACTGACTTGTATATGGCCTGCCCAGTGACAGCCCTCGGAAGGCACCCAGTGATGTATTGTCAATTTTaGCCTGGACATCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: HTDLYMACPVTALGRHPVMYCQF*PGHHFQ
Trigger: CTGAAAGTGATGTCCAGGCAAAAATTGACAATACAT...CACTGGGTGCCTTCCGAGGGCTGTCACTGGGCAGGCCATATACAAGTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCTCCATATGGGAAAGCAGGACAGCCAGAGGGCTGTGCGACATCAGGCAAGTGAAAACCTGTCAAGGTaGAAAATATGCACTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LLHMGKQDSQRAVRHQASENLSR*KICTEG
Trigger: TCCTTCAGTGCATATTTTCAACCTTGACAGGTTTTC...ACTTGCCTGATGTCGCACAGCCCTCTGGCTGTCCTGCTTTCCCATATGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATACAGCCTGTACCACGTaGCATTTTCTTAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYTACTT*HFLSNS
Trigger: GGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCTTGGTACGCAGCACTaGCTCGGTTCCCACATGCCA +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLGTQH*LGSHMP
Trigger: TGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAAG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGATCGGAAAATTCCCATTaGATGAGATTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGSENSH*MRFTNS
Trigger: GGAATTAGTGAATCTCATCAAATGGGAATTTTCCGA...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATGTGCCTTTAGGCATCTaGCATTCCTCATCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYVPLGI*HSSSSK
Trigger: TTTACTGGATGAGGAATGCAAGATGCCTAAAGGCAC...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCATGATGGTTGCTGCCTaGGTTCTGCGCAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCMMVAA*VLRRNL
Trigger: TAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCAT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCATGATGGTTGCTGCCTaGGTTCTGCGCAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCMMVAA*VLRRNL
Trigger: TAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCAT...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGCAGCTCGTCTAATCTaGTACCTCCTGCGGACCACA +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDAARLI*YLLRTT
Trigger: TGTGGTCCGCAGGAGGTACAAGATTAGACGAGCTGC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGCACCTGCTCCTCCTaGCGGTCCAGCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSTCSS*RSSSSC
Trigger: GCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGGTCTTTCTTCTTCCTaGGCCTTGCTGCGGAGCACC +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMGLSSS*ALLRST
Trigger: GGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGACC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTCAGCCAGGTCAAAATaGGTGAGGCAGTGTTCATTC +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCSARSK*VRQCSF
Trigger: GAATGAACACTGCCTCACCAATTTTGACCTGGCTGA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCCGCAGGAGAAGGTaGTTCAGGGTGATGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFRRRR*FRVMAP
Trigger: AGGGGCCATCACCCTGAACAACCTTCTCCTGCGGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GCGACCCCACCTACCGTCCATGCTGCTGTGAGGATGAAACGAGGTAACAGAGGAGAGAATTTGATGCAATaGGTAGTGTTTCTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: ATPPTVHAAVRMKRGNRGENLMQ*VVFLVD
Trigger: ATCAACCAGAAACACTACCAATTGCATCAAATTCTC...TCCTCTGTTACCTCGTTTCATCCTCACAGCAGCATGGACGGTAGGTGGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCTCTGGCTCCAGCACTaGACAGGACAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLWLQH*TGQRQE
Trigger: CTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGAG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCTTGGTACGCAGCACTaGCTCGGTTCCCACATGCCA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLGTQH*LGSHMP
Trigger: TGGCATGTGGGAACCGAGCAAGTGCTGCGTACCAAG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCTTAAAACAAGTAACTaGGTACGCAGCACTTGCTCG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYLKTSN*VRSTCS
Trigger: CGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAAGGCACCCAGTGACTaGGGCTCCCCTGTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQKAPSD*GSPVLR
Trigger: CCTCAGCACAGGGGAGCCCAAGTCACTGGGTGCCTT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCACGCACACACTGACTaGTATATGGCCTGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDHAHTD*YMACPV
Trigger: CACTGGGCAGGCCATATACAAGTCAGTGTGTGCGTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGATTCCAGGAGCCTGTaGGCTTGTTTTAACCCTTCA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCDSRSL*ACFNPS
Trigger: TGAAGGGTTAAAACAAGCCAACAGGCTCCTGGAATC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAAATACAAGTTTTCGTaGGTCAGCCGGGTGATCTCG +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCKYKFS*VSRVIS
Trigger: CGAGATCACCCGGCTGACCAACGAAAACTTGTATTT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCTTCATCTCTGGCCATTaGCTTGTAAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCFISGH*LVSFFS
Trigger: GCTGAAGAAGCTTACAAGCAAATGGCCAGAGATGAA...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCTATGTGCCATCTCCTTaGCATCATCCACTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCYVPSP*HHPLLQ
Trigger: TTGAAGGAGTGGATGATGCAAAGGAGATGGCACATA...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCACTGGTATTCCACTTaGTCAGCAAAATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAAGTGGAATACCAGTG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCAACGTGAATGGGAACTaGAAGTCATTAGGCTTGATA +
Preference number: 5 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFNVNGN*KSLGLI
Trigger: TATCAAGCCTAATGACTTCAAGTTCCCATTCACGTT...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GTATGTCTCTGTGGCAGTAGCCAGTTTCCGATGGCAGAGCCAGTGACACATCTCAACTGGTATTTGTCCTaGTCCAGTATCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VCLCGSSQFPMAEPVTHLNWYLS*SSISFS
Trigger: AGAGAAACTGATACTGGACAAGGACAAATACCAGTT...GAGATGTGTCACTGGCTCTGCCATCGGAAACTGGCTACTGCCACAGAGACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCAGGCAGCTCTCAGTTaGTCAGCTCTCAATTTTTCT +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCQAALS*SALNFS
Trigger: AGAAAAATTGAGAGCTGACAAACTGAGAGCTGCCTG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CCGCCTGAAGCAGCACTGAAGGTAGATGATGGCATGCATGCTCCTCTTGTAGTGTTCTCAGTCTCAGAGTaGTATATTCCTTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: PPEAALKVDDGMHAPLVVFSVSE*YIPSRL
Trigger: CAATCTGGAAGGAATATACAACTCTGAGACTGAGAA...CACTACAAGAGGAGCATGCATGCCATCATCTACCTTCAGTGCTGCTTCAGGCGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAGGGTCATCTCTTCCTaGAGGTCATCATATCTTTCT +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYRVISS*RSSYLS
Trigger: AGAAAGATATGATGACCTCAAGGAAGAGATGACCCT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGCACCTGCTCCTCCTaGCGGTCCAGCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSTCSS*RSSSSC
Trigger: GCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAGCACCTGCTCCTCCTaGCGGTCCAGCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSTCSS*RSSSSC
Trigger: GCAGGATGAGCTGGACCGCAAGGAGGAGCAGGTGCT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTCTTCTTCCTTGGCCTaGCTGCGGAGCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSSSLA*LRSTCS
Trigger: GGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAGA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATGAGGACTTCCTCCTaGCGGACATCAAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMMRTSS*RTSSSS
Trigger: CGAGGAGCTTGATGTCCGCAAGGAGGAAGTCCTCAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTGCCTGAGACAATCATaGGCTGAAGGATGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCCLRQS*AEGCSL
Trigger: TAGAGAACATCCTTCAGCCAATGATTGTCTCAGGCA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCCTATTCATCAGATTCTaGTCACGCAGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLFIRF*SRSHSS
Trigger: GGAAGAATGGCTGCGTGACAAGAATCTGATGAATAG...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAAACCCTGGCAAACTTaGTGTAGAGCTCCGACGCAG +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLKPWQT*CRAPTQ
Trigger: CTGCGTCGGAGCTCTACACAAAGTTTGCCAGGGTTT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGACCTTTTCCTCCACATaGGCCTCACTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMTFSST*ASLAEP
Trigger: TGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCATGCTTGGGAGGTATaGTGCAGCTGTCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMHAWEV*CSCLHL
Trigger: GAGATGCAGACAGCTGCACAATACCTCCCAAGCATG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTAT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFVACS*EMGLMY
Trigger: ATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTAT +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFVACS*EMGLMY
Trigger: ATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTGCAGCTTGGAGATGGGCTTGATGTATGTCTCTGTGGCAGTAGCCAGTTTCCGGAGTGTCCATGGAATTaGTTCCTTCATATATTCTTC +
Preference number: 5 (lower is better)
Translates to: LQLGDGLDVCLCGSSQFPECPWN*FLHIFF
Trigger: GAAGAATATATGAAGGAACAAATTCCATGGACACTC...CGGAAACTGGCTACTGCCACAGAGACATACATCAAGCCCATCTCCAAGCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTGGATGATGAAAGCTTaGTTTGATAGACGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYWMMKA*FDRRGF
Trigger: AAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGGCCTGGTCTGCCTTaGGTGGGCTTTGCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQWPGLP*VGFAGV
Trigger: AACTCCTGCAAAGCCCACCAAAGGCAGACCAGGCCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp CTTGGCAATTTCTTCCTGCAGACTAAGGACCCGCCCAGTGGCAACTTTCGCTTCTTCTCTAACACATTCTaGCATGTTTGCTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LGNFFLQTKDPPSGNFRFFSNTF*HVCFLS
Trigger: TGACAGAAAGCAAACATGCAAGAATGTGTTAGAGAA...GAAGCGAAAGTTGCCACTGGGCGGGTCCTTAGTCTGCAGGAAGAAATTGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATAACTGGTATTTGTCCTaGTCCAGTATCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYNWYLS*SSISFS
Trigger: AGAGAAACTGATACTGGACAAGGACAAATACCAGTT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTGCAGCTCGTCTAATCTaGTACCTCCTGCGGACCACA +
Preference number: 5 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSAARLI*YLLRTT
Trigger: TGTGGTCCGCAGGAGGTACAAGATTAGACGAGCTGC...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTATATTCCTTCCAGATaGGTTAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYYIPSR*VSFSTR
Trigger: CCTTGTGGAGAAACTAACCAATCTGGAAGGAATATA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTGTACCTCCTGCGGACCACATACATGCGCCAGTACTTTTGAATGATGGTTGCTGCTCTGTTTCTTGTTaGTATCGATCTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: LVPPADHIHAPVLLNDGCCSVSC*YRSACS
Trigger: GGAACATGCAGATCGATACAAACAAGAAACAGAGCA...GCAACCATCATTCAAAAGTACTGGCGCATGTATGTGGTCCGCAGGAGGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTTTCTTCCTTCAGATTaGATACCAGCTGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYFLPSD*IPAALF
Trigger: AAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAAA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAGGGTCATCTCTTCCTaGAGGTCATCATATCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCRVISS*RSSYLS
Trigger: AGAAAGATATGATGACCTCAAGGAAGAGATGACCCT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGTGGAGTCTGTTCTCTaGTGTCCAGGCTTAGGCACA +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLVESVL*CPGLGT
Trigger: TGTGCCTAAGCCTGGACACAAGAGAACAGACTCCAC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCTTCTTCCTTGGCCTaGCTGCGGAGCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSSSLA*LRSTCS
Trigger: GGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGGTCTTTCTTCTTCCTaGGCCTTGCTGCGGAGCACC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQGLSSS*ALLRST
Trigger: GGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGACC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGCTGCTGCTGTCGGTaGTTCTCCTCCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSCCCR*FSSFRL
Trigger: GAGCCTGAAGGAGGAGAACAACCGACAGCAGCAGCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAACCGAGTGGAAGGAGTaGAGCTGCCGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQTEWKE*SCRRME
Trigger: CTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGGT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGCTTGACCACCTGCTaGATCAGTTCAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMCLTTC*ISSGSM
Trigger: CATGGACCCTGAACTGATCAAGCAGGTGGTCAAGCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACATCATTTACTGGGCCTaGGGGTTCCCTGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDIIYWA*GFPGYK
Trigger: CTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGAT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCGTCGGCAGAATCTTCTaGTACCTTCAAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCVGRIF*YLQENG
Trigger: ACCATTTTCTTGAAGGTACAAGAAGATTCTGCCGAC...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGAGGGTGTGTCTGAAGTaGGGTGAGAAAGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLRVCLK*GEKVWL
Trigger: CAGCCACACTTTCTCACCCAACTTCAGACACACCCT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGCCCAAACAGAGTATaGCATCCTCCCAGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMCPNRV*HPPREH
Trigger: GTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAAGGCACCCAGTGACTaGGGCTCCCCTGTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQKAPSD*GSPVLR
Trigger: CCTCAGCACAGGGGAGCCCAAGTCACTGGGTGCCTT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS CCA 90 bp AAAGGAAAGGTGACAGGAAAGATGTGTTTAGCATCCATGAGCAGCTaGGGAGAGTCTTTCCTGTCTCGTAAACGCATCTGTATAGTACGA +
Preference number: 5 (lower is better)
Translates to: KGKVTGKMCLASMSS*GESFLSRKRICIVR
Trigger: TCGTACTATACAGATGCGTTTACGAGACAGGAAAGACTCTCCCCAGCTGCTCATGGATGCTAAACACATCTTTCCTGTCACCTTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATTCGGAAAATTCCCATTaGATGAGATTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYSENSH*MRFTNS
Trigger: GGAATTAGTGAATCTCATCAAATGGGAATTTTCCGA...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTGGATGATGAAAGCTTaGTTTGATAGACGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCWMMKA*FDRRGF
Trigger: AAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGTTTTCTTGTGCTCTTaGGCCATTTGGCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMVFLCS*AIWPGL
Trigger: CAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAAC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGCCCCACTGTTTTCTaGTGCTCTTTGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMCPTVF*CSLAIW
Trigger: CCAAATGGCCAAAGAGCACAAGAAAACAGTGGGGCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCAACTGGTATTTGTCCTaGTCCAGTATCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCNWYLS*SSISFS
Trigger: AGAGAAACTGATACTGGACAAGGACAAATACCAGTT...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTACCAAACTGGTATTaGTCCTTGTCCAGTATCAGT +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCLPNWY*SLSSIS
Trigger: ACTGATACTGGACAAGGACAAATACCAGTTTGGTAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTGCTCACGGAGTATCTaGCGATACCTATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLCSRSI*RYLFLA
Trigger: GGCCAGAAATAGGTATCGCAAGATACTCCGTGAGCA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp GGTCTCCTTAAAACAAGTAACTTGGTACGCAGCACTTGCTCGGTTCCCACATGCTTCTCAGTCTCAGAGTaGTATATTCCTTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: GLLKTSNLVRSTCSVPTCFSVSE*YIPSRL
Trigger: CAATCTGGAAGGAATATACAACTCTGAGACTGAGAA...GCATGTGGGAACCGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCTTCTTCCTTGGCCTaGCTGCGGAGCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSSSLA*LRSTCS
Trigger: GGAGCAGGTGCTCCGCAGCAAGGCCAAGGAAGAAGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGGTCTTTCTTCTTCCTaGGCCTTGCTGCGGAGCACC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQGLSSS*ALLRST
Trigger: GGTGCTCCGCAGCAAGGCCAAGGAAGAAGAAAGACC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCTCACTGAGGGCCTaGCGCAACTCATTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFSLRA*RNSFSS
Trigger: TGAGCTAAATGAGTTGCGCAAGGCCCTCAGTGAGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATGAGGACTTCCTCCTaGCGGACATCAAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQMRTSS*RTSSSS
Trigger: CGAGGAGCTTGATGTCCGCAAGGAGGAAGTCCTCAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATCAAACCAATGTATGCTaGTGCTATTTCACCTTTATC +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYQTNVC*CYFTFI
Trigger: GATAAAGGTGAAATAGCACAAGCATACATTGGTTTG...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGCTGCTGCTGTCGGTaGTTCTCCTCCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSCCCR*FSSFRL
Trigger: GAGCCTGAAGGAGGAGAACAACCGACAGCAGCAGCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAACCGAGTGGAAGGAGTaGAGCTGCCGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQTEWKE*SCRRME
Trigger: CTCCATCCTCCGGCAGCTCAACTCCTTCCACTCGGT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTCCGCAGGAGAAGGTaGTTCAGGGTGATGGCCCCT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFRRRR*FRVMAP
Trigger: AGGGGCCATCACCCTGAACAACCTTCTCCTGCGGAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCCGCAGGAGAAGGTaGTTCAGGGTGATGGCCCCT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFRRRR*FRVMAP
Trigger: AGGGGCCATCACCCTGAACAACCTTCTCCTGCGGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp GCTGCTGTGAGGATGAAACGAGGTAACAGAGGAAAGCGCCGCAGGAAAGCATATATGTATTGTCAATTTTaGCCTGGACATCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: AAVRMKRGNRGKRRRKAYMYCQF*PGHHFQ
Trigger: CTGAAAGTGATGTCCAGGCAAAAATTGACAATACAT...ATATGCTTTCCTGCGGCGCTTTCCTCTGTTACCTCGTTTCATCCTCACAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGGCATGAACTCATTTTaGCGCAACACTGTTAGCGCA +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDGMNSF*RNTVSA
Trigger: TGCGCTAACAGTGTTGCGCAAAAATGAGTTCATGCC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAAACCCTGGCAAACTTaGTGTAGAGCTCCGACGCAG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQKPWQT*CRAPTQ
Trigger: CTGCGTCGGAGCTCTACACAAAGTTTGCCAGGGTTT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCATGCTTGGGAGGTATaGTGCAGCTGTCTGCATCTC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQHAWEV*CSCLHL
Trigger: GAGATGCAGACAGCTGCACAATACCTCCCAAGCATG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACGTGCCTTTAGGCATCTaGCATTCCTCATCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDVPLGI*HSSSSK
Trigger: TTTACTGGATGAGGAATGCAAGATGCCTAAAGGCAC...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATGATGGTTGCTGCCTaGGTTCTGCGCAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMMMVAA*VLRRNL
Trigger: TAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCAGCTCGTCTAATCTaGTACCTCCTGCGGACCACA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAARLI*YLLRTT
Trigger: TGTGGTCCGCAGGAGGTACAAGATTAGACGAGCTGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGCAGCTGCATGATCTaGTTCTCCATGCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQCSCMI*FSMPMC
Trigger: GCACATCGGCATGGAGAACAAGATCATGCAGCTGCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGATATATTCAGACTCGTaGCTGCTGTGGGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLIYSDS*LLWVES
Trigger: AGACTCCACCCACAGCAGCAACGAGTCTGAATATAT...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATATATTCAGACTCGTaGCTGCTGTGGGTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMIYSDS*LLWVES
Trigger: AGACTCCACCCACAGCAGCAACGAGTCTGAATATAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATGAGGACTTCCTCCTaGCGGACATCAAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITMRTSS*RTSSSS
Trigger: CGAGGAGCTTGATGTCCGCAAGGAGGAAGTCCTCAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCTGGCGAGATGTGTaGTGCTTCATAAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFWRDV*CFIKPS
Trigger: AGAGGGCTTTATGAAGCACAACACATCTCGCCAGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTCAGCCAGGTCAAAATaGGTGAGGCAGTGTTCATTC +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMSARSK*VRQCSF
Trigger: GAATGAACACTGCCTCACCAATTTTGACCTGGCTGA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCAGCCATTCTTCCAGTaGACTGACATTGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDQPFFQ*TDIVPD
Trigger: ATCAGGTACAATGTCAGTCAACTGGAAGAATGGCTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTTTCACTTGCAAAAGTaGAGCAGCCTGAATGAGAGG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDFHLQK*SSLNER
Trigger: CCTCTCATTCAGGCTGCTCAACTTTTGCAAGTGAAA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGGGTGTGTCTGAAGTaGGGTGAGAAAGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQRVCLK*GEKVWL
Trigger: CAGCCACACTTTCTCACCCAACTTCAGACACACCCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCTGGCTCTGAGACTGTaGCTGCCCCACAGTTCTAAT +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLALRL*LPHSSN
Trigger: ATTAGAACTGTGGGGCAGCAACAGTCTCAGAGCCAG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGGCATGAACTCATTTTaGCGCAACACTGTTAGCGCA +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLGMNSF*RNTVSA
Trigger: TGCGCTAACAGTGTTGCGCAAAAATGAGTTCATGCC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS CCA 90 bp TTTCACCAACAAGTATGTCAGGATTTCGTAAGTGAGGCAGCTCCTTaGTCTTTGGATCTAGATGGTATTCCAAATCCTTTCCTTCCTCGA +
Preference number: 5 (lower is better)
Translates to: FHQQVCQDFVSEAAP*SLDLDGIPNPFLPR
Trigger: TCGAGGAAGGAAAGGATTTGGAATACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGACATACTTGTTGGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCATCTCTGGCCATTaGCTTGTAAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFISGH*LVSFFS
Trigger: GCTGAAGAAGCTTACAAGCAAATGGCCAGAGATGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAACCTTTTCCTCCACATaGGCCTCACTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQTFSST*ASLAEP
Trigger: TGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAACCTTTTCCTCCACATaGGCCTCACTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITTFSST*ASLAEP
Trigger: TGGTTCTGCCAGTGAGGCCAATGTGGAGGAAAAGGT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTAT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFVACS*EMGLMY
Trigger: ATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCACTGGTATTCCACTTaGTCAGCAAAATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAAGTGGAATACCAGTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCAGGCAGCTCTCAGTTaGTCAGCTCTCAATTTTTCT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMQAALS*SALNFS
Trigger: AGAAAAATTGAGAGCTGACAAACTGAGAGCTGCCTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCTTTAGCTCACGCTaGGCCATCATCCGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFFSSR*AIIRLK
Trigger: CTTCAGGCGGATGATGGCCAAGCGTGAGCTAAAGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGAGCGAGCCTCGATTTaGAGCTTCTTTAGCTCACGC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQERASI*SFFSSR
Trigger: GCGTGAGCTAAAGAAGCTCAAAATCGAGGCTCGCTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAGGTCTTTCCGGAGCTaGGCAATTTCTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQRSFRS*AISSCR
Trigger: TCTGCAGGAAGAAATTGCCAAGCTCCGGAAAGACCT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCAGCTGCTCTGTTTCTaGTTTGTATCGATCTGCATG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMQLLCF*FVSICM
Trigger: CATGCAGATCGATACAAACAAGAAACAGAGCAGCTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTGGAGTCTGTTCTCTaGTGTCCAGGCTTAGGCACA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVESVL*CPGLGT
Trigger: TGTGCCTAAGCCTGGACACAAGAGAACAGACTCCAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGTGGAGTCTGTTCTCTaGTGTCCAGGCTTAGGCACA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQVESVL*CPGLGT
Trigger: TGTGCCTAAGCCTGGACACAAGAGAACAGACTCCAC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGCCTGAGACAATCATaGGCTGAAGGATGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMCLRQS*AEGCSL
Trigger: TAGAGAACATCCTTCAGCCAATGATTGTCTCAGGCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGCATTGAAAACCGCATaGACAACCAGGAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMALKTA*TTRKNW
Trigger: CCAGTTTTTCCTGGTTGTCAATGCGGTTTTCAATGC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTCTGGCTCCAGCACTaGACAGGACAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLWLQH*TGQRQE
Trigger: CTCCTGTCTTTGTCCTGTCAAGTGCTGGAGCCAGAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATCATTTACTGGGCCTaGGGGTTCCCTGGTTACAAG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQIIYWA*GFPGYK
Trigger: CTTGTAACCAGGGAACCCCAAGGCCCAGTAAATGAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAGCTTGGAGATGGGCTaGATGTATGTCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSLEMG*MYVSVA
Trigger: TGCCACAGAGACATACATCAAGCCCATCTCCAAGCT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTCGTGGCCTGCAGCTaGGAGATGGGCTTGATGTAT +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFVACS*EMGLMY
Trigger: ATACATCAAGCCCATCTCCAAGCTGCAGGCCACGAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATGCCCCACTGTTTTCTaGTGCTCTTTGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSCPTVF*CSLAIW
Trigger: CCAAATGGCCAAAGAGCACAAGAAAACAGTGGGGCA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACAACGTGAATGGGAACTaGAAGTCATTAGGCTTGATA +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDNVNGN*KSLGLI
Trigger: TATCAAGCCTAATGACTTCAAGTTCCCATTCACGTT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTCAGGCAGCTCTCAGTTaGTCAGCTCTCAATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSQAALS*SALNFS
Trigger: AGAAAAATTGAGAGCTGACAAACTGAGAGCTGCCTG...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQHAPVL*NDGCCL
Trigger: AAGGCAGCAACCATCATTCAAAAGTACTGGCGCATG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCTCACGGAGTATCTaGCGATACCTATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCSRSI*RYLFLA
Trigger: GGCCAGAAATAGGTATCGCAAGATACTCCGTGAGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGCAGCTGCATGATCTaGTTCTCCATGCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQCSCMI*FSMPMC
Trigger: GCACATCGGCATGGAGAACAAGATCATGCAGCTGCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTCTGCTCATCAACTTaGCGCTGCAGCTGCATGATC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFCSST*RCSCMI
Trigger: GATCATGCAGCTGCAGCGCAAAGTTGATGAGCAGAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTGGTTCCTCTGTCCTaGATGGAATGTCTTCCATTT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMLVPLS*MECLPF
Trigger: AAATGGAAGACATTCCATCAAGGACAGAGGAACCAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTCTCACTGAGGGCCTaGCGCAACTCATTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFSLRA*RNSFSS
Trigger: TGAGCTAAATGAGTTGCGCAAGGCCCTCAGTGAGAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACTTGTGGAATCTGTCATaGTATTCTTGTCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDLWNLS*YSCHPW
Trigger: CCAAGGATGACAAGAATACAATGACAGATTCCACAA...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAAATCCAAGTTTTCGTaGGTCAGCCGGGTGATCTCG +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQKSKFS*VSRVIS
Trigger: CGAGATCACCCGGCTGACCAACGAAAACTTGGATTT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356338.10
ENST00000399231.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCTTTCCTGGGAATGTaGACTGGTCGGATGGGTTCA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSFLGM*TGRMGS
Trigger: TGAACCCATCCGACCAGTCAACATTCCCAGGAAAGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGCTCATCCTCCTTCTaGTATTCCAGCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQCSSSF*YSSIPW
Trigger: CCAAGGGATGCTGGAATACAAGAAGGAGGATGAGCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATGCTCATCCTCCTTCTaGTATTCCAGCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITCSSSF*YSSIPW
Trigger: CCAAGGGATGCTGGAATACAAGAAGGAGGATGAGCA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAATCCTGGAATCAAATaGACTGCTACACCACGTGGC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQNPGIK*TATPRG
Trigger: GCCACGTGGTGTAGCAGTCAATTTGATTCCAGGATT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTCTGGCGAGATGTGTaGTGCTTCATAAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQFWRDV*CFIKPS
Trigger: AGAGGGCTTTATGAAGCACAACACATCTCGCCAGAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCGGGCAAGAAATGTATaGTCAATTTTTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMRARNV*SIFAWT
Trigger: TGTCCAGGCAAAAATTGACAATACATTTCTTGCCCG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGACAGCCTGTACCACGTaGCATTTTCTTAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQTACTT*HFLSNS
Trigger: GGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGATTCAGGGTGCACGTaGAGTCGTGCTACACAGGAT +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQDSGCT*SRATQD
Trigger: ATCCTGTGTAGCACGACTCAACGTGCACCCTGAATC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACCTGGCGCTGAGCACTaGGTCTCCTTAAAACAAGTA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITPGAEH*VSLKQV
Trigger: TACTTGTTTTAAGGAGACCAAGTGCTCAGCGCCAGG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGCCCAAACAGAGTATaGCATCCTCCCAGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQCPNRV*HPPREH
Trigger: GTGCTCTCTGGGAGGATGCAATACTCTGTTTGGGCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGTTCCTGTCTTTTTGGTaGAGACAACCTGCTACCAAT +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLFLSFW*RQPATN
Trigger: ATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGAA...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCCTGTCTTTTTGGTaGAGACAACCTGCTACCAAT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFLSFW*RQPATN
Trigger: ATTGGTAGCAGGTTGTCTCAACCAAAAAGACAGGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS TCA 90 bp TCATCATATCTTTCTTCCAGGCGACTGAACTCATTCAGAAGGTTCTaGTATCTCAGCCTTTCATCATTAAGGTCGAGTTCCAGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: SSYLSSRRLNSFRRF*YLSLSSLRSSSSCF
Trigger: GAAACAACTGGAACTCGACCTTAATGATGAAAGGCTGAGATATCAGAACCTTCTGAATGAGTTCAGTCGCCTGGAAGAAAGATATGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGCAGCTCCTTGGTCTTaGGATCTAGATGGTATTCCA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITAAPWS*DLDGIP
Trigger: TGGAATACCATCTAGATCCAAAGACCAAGGAGCTGC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGCAGCTCCTTGGTCTTaGGATCTAGATGGTATTCCA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQAAPWS*DLDGIP
Trigger: TGGAATACCATCTAGATCCAAAGACCAAGGAGCTGC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGAACCACTCACAGTaGCAAAGTATCGCATGGCAT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITQNHSQ*QSIAWH
Trigger: ATGCCATGCGATACTTTGCAACTGTGAGTGGTTCTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCACAGGACTGCCTCCTaGTTTTGTGTAATTAAAGTT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMHRTAS*FCVIKV
Trigger: AACTTTAATTACACAAAACAAGGAGGCAGTCCTGTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTATGTGCCATCTCCTTaGCATCATCCACTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQYVPSP*HHPLLQ
Trigger: TTGAAGGAGTGGATGATGCAAAGGAGATGGCACATA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGCTTGGAGATGGGCTaGATGTATGTCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSLEMG*MYVSVA
Trigger: TGCCACAGAGACATACATCAAGCCCATCTCCAAGCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTGGATGATGAAAGCTTaGTTTGATAGACGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMWMMKA*FDRRGF
Trigger: AAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGTTTTCTTGTGCTCTTaGGCCATTTGGCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQVFLCS*AIWPGL
Trigger: CAGACCAGGCCAAATGGCCAAAGAGCACAAGAAAAC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGCCCCACTGTTTTCTaGTGCTCTTTGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQCPTVF*CSLAIW
Trigger: CCAAATGGCCAAAGAGCACAAGAAAACAGTGGGGCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCACATTCTTGCATGTTaGCTTTCTGTCACTCAGCAC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQHILAC*LSVTQH
Trigger: GTGCTGAGTGACAGAAAGCAAACATGCAAGAATGTG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACCACGGAAAAAGATCTTaGTCTTACCAAACTGGTATT +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDHGKRS*SYQTGI
Trigger: AATACCAGTTTGGTAAGACAAAGATCTTTTTCCGTG...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACATGCGCCAGTACTTTaGAATGATGGTTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQHAPVL*NDGCCL
Trigger: AAGGCAGCAACCATCATTCAAAAGTACTGGCGCATG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGGTCTTTCCGGAGCTaGGCAATTTCTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRSFRS*AISSCR
Trigger: TCTGCAGGAAGAAATTGCCAAGCTCCGGAAAGACCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTTCTTCCTTCAGATTaGATACCAGCTGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFLPSD*IPAALF
Trigger: AAACAGAGCAGCTGGTATCAAATCTGAAGGAAGAAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTACCTTCTTCTCACTaGGTTCCTCTGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVPSSH*VPLSLM
Trigger: CATCAAGGACAGAGGAACCAAGTGAGAAGAAGGTAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTATTCTTGTCATCCTaGGGTTGGATGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVFLSS*GWMASF
Trigger: GAAAGAGGCCATCCAACCCAAGGATGACAAGAATAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AATCCTAAGGAATTGACAGGCACTACACACTGGTCTTTCCATCAGAGAATGGACATTCCAGGAGCCTATTaGTTTCTTTCAAACCAATGT +
Preference number: 5 (lower is better)
Translates to: NPKELTGTTHWSFHQRMDIPGAY*FLSNQC
Trigger: ACATTGGTTTGAAAGAAACAAATAGGCTCCTGGAAT...GTCCATTCTCTGATGGAAAGACCAGTGTGTAGTGCCTGTCAATTCCTTAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356338.10
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCTTTCCTGGGAATGTaGACTGGTCGGATGGGTTCA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSFLGM*TGRMGS
Trigger: TGAACCCATCCGACCAGTCAACATTCCCAGGAAAGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAATCCTGGAATCAAATaGACTGCTACACCACGTGGC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQNPGIK*TATPRG
Trigger: GCCACGTGGTGTAGCAGTCAATTTGATTCCAGGATT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCTGGCGAGATGTGTaGTGCTTCATAAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFWRDV*CFIKPS
Trigger: AGAGGGCTTTATGAAGCACAACACATCTCGCCAGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAACAGCCTGTACCACGTaGCATTTTCTTAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITTACTT*HFLSNS
Trigger: GGAGTTGCTAAGAAAATGCAACGTGGTACAGGCTGT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAAGAGAGAAAGGGCATaGTGTGAGGACTTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITKRERA*CEDFSG
Trigger: TCCTGAGAAGTCCTCACACAATGCCCTTTCTCTCTT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTACCCAGAGGATCCTaGACTATGCCTGCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLPRGS*TMPAKE
Trigger: TTCCTTAGCAGGCATAGTCAAGGATCCTCTGGGTAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATTTCAGAGAGGCTTTaGCTGTTTCCTGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMISERL*LFPVFL
Trigger: CAAAAAGACAGGAAACAGCAAAAGCCTCTCTGAAAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGATTCCAGGAGCCTGTaGGCTTGTTTTAACCCTTCA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITDSRSL*ACFNPS
Trigger: TGAAGGGTTAAAACAAGCCAACAGGCTCCTGGAATC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAAAATACAAGTTTTCGTaGGTCAGCCGGGTGATCTCG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITKYKFS*VSRVIS
Trigger: CGAGATCACCCGGCTGACCAACGAAAACTTGTATTT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCATCTCTGGCCATTaGCTTGTAAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFISGH*LVSFFS
Trigger: GCTGAAGAAGCTTACAAGCAAATGGCCAGAGATGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACAGAACCACTCACAGTaGCAAAGTATCGCATGGCAT +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQQNHSQ*QSIAWH
Trigger: ATGCCATGCGATACTTTGCAACTGTGAGTGGTTCTG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATATGTGCCATCTCCTTaGCATCATCCACTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQYVPSP*HHPLLQ
Trigger: TTGAAGGAGTGGATGATGCAAAGGAGATGGCACATA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATAAAAGAGTGCTGTTaGACAGCAGAATGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITIKECC*TAEWRA
Trigger: GGCTCTCCATTCTGCTGTCAAACAGCACTCTTTTAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ACAGGGCAAGATATCCCTTCCAGGCAAGATATCCTTTACAGAAGAAAAGTTCTGGAGTGTCCATGGAATTaGTTCCTTCATATATTCTTC +
Preference number: 5 (lower is better)
Translates to: TGQDIPSRQDILYRRKVLECPWN*FLHIFF
Trigger: GAAGAATATATGAAGGAACAAATTCCATGGACACTC...CAGAACTTTTCTTCTGTAAAGGATATCTTGCCTGGAAGGGATATCTTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTGCCTTTAGGCATCTaGCATTCCTCATCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVPLGI*HSSSSK
Trigger: TTTACTGGATGAGGAATGCAAGATGCCTAAAGGCAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp CTTCACTTAGTTGAAGACGTTCTAAGTCACTTCGTAGTTTCTCAGTCTCAGAGTTGGATGATGAAAGCTTaGTTTGATAGACGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LHLVEDVLSHFVVSQSQSWMMKA*FDRRGF
Trigger: AAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCA...ACTCTGAGACTGAGAAACTACGAAGTGACTTAGAACGTCTTCAACTAAGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACACATTCTTGCATGTTaGCTTTCTGTCACTCAGCAC +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITHILAC*LSVTQH
Trigger: GTGCTGAGTGACAGAAAGCAAACATGCAAGAATGTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGTTCTCTAACACATTCTaGCATGTTTGCTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMFSNTF*HVCFLS
Trigger: TGACAGAAAGCAAACATGCAAGAATGTGTTAGAGAA...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAATGATGGTTGCTGCCTaGGTTCTGCGCAGAAACTTA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQMMVAA*VLRRNL
Trigger: TAAGTTTCTGCGCAGAACCAAGGCAGCAACCATCAT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCTGCTCTGTTTCTaGTTTGTATCGATCTGCATG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITQLLCF*FVSICM
Trigger: CATGCAGATCGATACAAACAAGAAACAGAGCAGCTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACAGCTGCTCTGTTTCTaGTTTGTATCGATCTGCATG +
Preference number: 5 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSQLLCF*FVSICM
Trigger: CATGCAGATCGATACAAACAAGAAACAGAGCAGCTG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGTACCTTCTTCTCACTaGGTTCCTCTGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQVPSSH*VPLSLM
Trigger: CATCAAGGACAGAGGAACCAAGTGAGAAGAAGGTAC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGTATTCTTGTCATCCTaGGGTTGGATGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQVFLSS*GWMASF
Trigger: GAAAGAGGCCATCCAACCCAAGGATGACAAGAATAC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTCTGTCATTGTATTCTaGTCATCCTTGGGTTGGATG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSVIVF*SSLGWM
Trigger: CATCCAACCCAAGGATGACAAGAATACAATGACAGA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGCAAACCAATGTATGCTaGTGCTATTTCACCTTTATC +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMQTNVC*CYFTFI
Trigger: GATAAAGGTGAAATAGCACAAGCATACATTGGTTTG...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATGCCTGAGACAATCATaGGCTGAAGGATGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQCLRQS*AEGCSL
Trigger: TAGAGAACATCCTTCAGCCAATGATTGTCTCAGGCA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCCATTCTTCCAGTaGACTGACATTGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITQPFFQ*TDIVPD
Trigger: ATCAGGTACAATGTCAGTCAACTGGAAGAATGGCTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACAGCCATTCTTCCAGTaGACTGACATTGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQQPFFQ*TDIVPD
Trigger: ATCAGGTACAATGTCAGTCAACTGGAAGAATGGCTG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACTATTCATCAGATTCTaGTCACGCAGCCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLFIRF*SRSHSS
Trigger: GGAAGAATGGCTGCGTGACAAGAATCTGATGAATAG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTTCACTTGCAAAAGTaGAGCAGCCTGAATGAGAGG +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQFHLQK*SSLNER
Trigger: CCTCTCATTCAGGCTGCTCAACTTTTGCAAGTGAAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTTCACTTGCAAAAGTaGAGCAGCCTGAATGAGAGG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFHLQK*SSLNER
Trigger: CCTCTCATTCAGGCTGCTCAACTTTTGCAAGTGAAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGATGTATTGTCAATTTTaGCCTGGACATCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMMYCQF*PGHHFQ
Trigger: CTGAAAGTGATGTCCAGGCAAAAATTGACAATACAT...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCGGGCAAGAAATGTATaGTCAATTTTTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQRARNV*SIFAWT
Trigger: TGTCCAGGCAAAAATTGACAATACATTTCTTGCCCG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TCCTTCCATCATTCTCCTGTATGTAAACTCACGGTACCTAGTTGGTTAAGGATGGAGAATTTGATGCAATaGGTAGTGTTTCTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: SFHHSPVCKLTVPSWLRMENLMQ*VVFLVD
Trigger: ATCAACCAGAAACACTACCAATTGCATCAAATTCTC...CATCCTTAACCAACTAGGTACCGTGAGTTTACATACAGGAGAATGATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGCATTGAAAACCGCATaGACAACCAGGAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITALKTA*TTRKNW
Trigger: CCAGTTTTTCCTGGTTGTCAATGCGGTTTTCAATGC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATATGTGCCATCTCCTTaGCATCATCCACTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQYVPSP*HHPLLQ
Trigger: TTGAAGGAGTGGATGATGCAAAGGAGATGGCACATA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAATAAAAGAGTGCTGTTaGACAGCAGAATGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQIKECC*TAEWRA
Trigger: GGCTCTCCATTCTGCTGTCAAACAGCACTCTTTTAT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTGTTCAAATGTGTGTaGTACAATTTTTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQLFKCV*YNFWAQ
Trigger: CTGGGCCCAAAAATTGTACAACACACATTTGAACAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTGGATGATGAAAGCTTaGTTTGATAGACGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQWMMKA*FDRRGF
Trigger: AAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTATATTCCTTCCAGATaGGTTAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQYIPSR*VSFSTR
Trigger: CCTTGTGGAGAAACTAACCAATCTGGAAGGAATATA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTTCTCAGTCTCAGAGTaGTATATTCCTTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQFSVSE*YIPSRL
Trigger: CAATCTGGAAGGAATATACAACTCTGAGACTGAGAA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACAGCTGCTCTGTTTCTaGTTTGTATCGATCTGCATG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQQLLCF*FVSICM
Trigger: CATGCAGATCGATACAAACAAGAAACAGAGCAGCTG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTGGTTCCTCTGTCCTaGATGGAATGTCTTCCATTT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITLVPLS*MECLPF
Trigger: AAATGGAAGACATTCCATCAAGGACAGAGGAACCAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGGTTCCTCTGTCCTaGATGGAATGTCTTCCATTT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLVPLS*MECLPF
Trigger: AAATGGAAGACATTCCATCAAGGACAGAGGAACCAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATCTGTCATTGTATTCTaGTCATCCTTGGGTTGGATG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITSVIVF*SSLGWM
Trigger: CATCCAACCCAAGGATGACAAGAATACAATGACAGA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACAGCCATTCTTCCAGTaGACTGACATTGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQQPFFQ*TDIVPD
Trigger: ATCAGGTACAATGTCAGTCAACTGGAAGAATGGCTG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTTCACTTGCAAAAGTaGAGCAGCCTGAATGAGAGG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFHLQK*SSLNER
Trigger: CCTCTCATTCAGGCTGCTCAACTTTTGCAAGTGAAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACGGGCAAGAAATGTATaGTCAATTTTTGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITRARNV*SIFAWT
Trigger: TGTCCAGGCAAAAATTGACAATACATTTCTTGCCCG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGTCAACAATAGCCACTTaGTCTAATCCTACCCCTAAA +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQSTIAT*SNPTPK
Trigger: TTTAGGGGTAGGATTAGACAAAGTGGCTATTGTTGA...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACTTAAAACAAGTAACTaGGTACGCAGCACTTGCTCG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLKTSN*VRSTCS
Trigger: CGAGCAAGTGCTGCGTACCAAGTTACTTGTTTTAAG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGATTTCAGAGAGGCTTTaGCTGTTTCCTGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQISERL*LFPVFL
Trigger: CAAAAAGACAGGAAACAGCAAAAGCCTCTCTGAAAT...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACACAGGACTGCCTCCTaGTTTTGTGTAATTAAAGTT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQHRTAS*FCVIKV
Trigger: AACTTTAATTACACAAAACAAGGAGGCAGTCCTGTG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGGAGTGTCCATGGAATTaGTTCCTTCATATATTCTTC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQECPWN*FLHIFF
Trigger: GAAGAATATATGAAGGAACAAATTCCATGGACACTC...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGTTCAAATGTGTGTaGTACAATTTTTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLFKCV*YNFWAQ
Trigger: CTGGGCCCAAAAATTGTACAACACACATTTGAACAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAACACTGGTATTCCACTTaGTCAGCAAAATGTTGGATG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQHWYST*SAKCWM
Trigger: CATCCAACATTTTGCTGACAAAGTGGAATACCAGTG...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAACGTGAATGGGAACTaGAAGTCATTAGGCTTGATA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQNVNGN*KSLGLI
Trigger: TATCAAGCCTAATGACTTCAAGTTCCCATTCACGTT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAAACTGGTATTTGTCCTaGTCCAGTATCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQNWYLS*SSISFS
Trigger: AGAGAAACTGATACTGGACAAGGACAAATACCAGTT...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTACCAAACTGGTATTaGTCCTTGTCCAGTATCAGT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLPNWY*SLSSIS
Trigger: ACTGATACTGGACAAGGACAAATACCAGTTTGGTAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACATTCTCAGTCTCAGAGTaGTATATTCCTTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITFSVSE*YIPSRL
Trigger: CAATCTGGAAGGAATATACAACTCTGAGACTGAGAA...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATGCTCTGTTTCTTGTTaGTATCGATCTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQCSVSC*YRSACS
Trigger: GGAACATGCAGATCGATACAAACAAGAAACAGAGCA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAAGGGTCATCTCTTCCTaGAGGTCATCATATCTTTCT +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQRVISS*RSSYLS
Trigger: AGAAAGATATGATGACCTCAAGGAAGAGATGACCCT...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATTGTGGAATCTGTCATaGTATTCTTGTCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQLWNLS*YSCHPW
Trigger: CCAAGGATGACAAGAATACAATGACAGATTCCACAA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACAGCAAACCAATGTATGCTaGTGCTATTTCACCTTTATC +
Preference number: 5 (lower is better)
Translates to: KLTVPSWLRMSVAIKITQQTNVC*CYFTFI
Trigger: GATAAAGGTGAAATAGCACAAGCATACATTGGTTTG...CTGTGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAAGAAAACCTGTCAAGGTaGAAAATATGCACTGAAGGA +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQENLSR*KICTEG
Trigger: TCCTTCAGTGCATATTTTCAACCTTGACAGGTTTTC...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATTTCAGAGAGGCTTTaGCTGTTTCCTGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITISERL*LFPVFL
Trigger: CAAAAAGACAGGAAACAGCAAAAGCCTCTCTGAAAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAATCGGAAAATTCCCATTaGATGAGATTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQSENSH*MRFTNS
Trigger: GGAATTAGTGAATCTCATCAAATGGGAATTTTCCGA...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCATCGGAAAATTCCCATTaGATGAGATTCACTAATTCC +
Preference number: 5 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSSENSH*MRFTNS
Trigger: GGAATTAGTGAATCTCATCAAATGGGAATTTTCCGA...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACACACGGAAAAAGATCTTaGTCTTACCAAACTGGTATT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITHGKRS*SYQTGI
Trigger: AATACCAGTTTGGTAAGACAAAGATCTTTTTCCGTG...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACACGGAAAAAGATCTTaGTCTTACCAAACTGGTATT +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQHGKRS*SYQTGI
Trigger: AATACCAGTTTGGTAAGACAAAGATCTTTTTCCGTG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TTGTCAGCAAAATGTTGGATGATGAAAGCTTTGTTTGATAGACGAGGCTTTTCACACGGAAAAAGATCTTaGTCTTACCAAACTGGTATT +
Preference number: 5 (lower is better)
Translates to: LSAKCWMMKALFDRRGFSHGKRS*SYQTGI
Trigger: AATACCAGTTTGGTAAGACAAAGATCTTTTTCCGTG...TGAAAAGCCTCGTCTATCAAACAAAGCTTTCATCATCCAACATTTTGCTGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556196.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTGTGGAATCTGTCATaGTATTCTTGTCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQLWNLS*YSCHPW
Trigger: CCAAGGATGACAAGAATACAATGACAGATTCCACAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp ATGAGTGTTGCTATAAAGATAACACAGCACGAAAGAGCCTATCTTTGTTTCCAACAAACCAATGTATGCTaGTGCTATTTCACCTTTATC +
Preference number: 5 (lower is better)
Translates to: MSVAIKITQHERAYLCFQQTNVC*CYFTFI
Trigger: GATAAAGGTGAAATAGCACAAGCATACATTGGTTTG...TTGGAAACAAAGATAGGCTCTTTCGTGCTGTGTTATCTTTATAGCAACACTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAATTCCAGGAGCCTATTaGTTTCTTTCAAACCAATGT +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITIPGAY*FLSNQC
Trigger: ACATTGGTTTGAAAGAAACAAATAGGCTCCTGGAAT...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356338.10
ENST00000553916.5
CDS-3UTR CAA 90 bp TGTAAACTCACGGTACCTAGTTGGTTAAGGATGAGTGTTGCTATAAAGATAACAGTTCTTAACAAGTTTTaGCTCATCCTCCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: CKLTVPSWLRMSVAIKITVLNKF*LILLLV
Trigger: TACAAGAAGGAGGATGAGCAAAAACTTGTTAAGAAC...TGTTATCTTTATAGCAACACTCATCCTTAACCAACTAGGTACCGTGAGTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATCAACAATAGCCACTTaGTCTAATCCTACCCCTAAA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQSTIAT*SNPTPK
Trigger: TTTAGGGGTAGGATTAGACAAAGTGGCTATTGTTGA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAATTCTCTAACACATTCTaGCATGTTTGCTTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQFSNTF*HVCFLS
Trigger: TGACAGAAAGCAAACATGCAAGAATGTGTTAGAGAA...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS-3UTR CAA 90 bp AGTAACTCACTGGAAATAATGGGTTCTTATTTCGGGCAAGAAATGTATTGTCAAGTTCTTAACAAGTTTTaGCTCATCCTCCTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: SNSLEIMGSYFGQEMYCQVLNKF*LILLLV
Trigger: TACAAGAAGGAGGATGAGCAAAAACTTGTTAAGAAC...TTGACAATACATTTCTTGCCCGAAATAAGAACCCATTATTTCCAGTGAGTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp CAGCTGCTCCATGAGGACACGGTAGGCAGGTGCACCTaGGGCGGTCACCTCTGGGGCACTTTTCTCACTGAG +
Preference number: 6 (lower is better)
Translates to: QLLHEDTVGRCT*GGHLWGTFLTE
Trigger: CTCAGTGAGAAAAGTGCCCCAGAGGTGACCGCCCCAGGTGCACCTGCCTACCGTGTCCTCATGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399228.5
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS GCA 72 bp AAATCCAAGTTTTCGTTGGTCAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATGCGGGCCTCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: KSKFSLVSRVIS*CRLASMRASGG
Trigger: GCCCCCAGAGGCCCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCTGACCAACGAAAACTTGGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
CDS CCA 72 bp AGCTGCTGCTGTCGGTTGTTCTCCTCCTTCAGGCTCTaGATCTCCCCACGGAGGGCCTCGGCCTCATTCTCA +
Preference number: 6 (lower is better)
Translates to: SCCCRLFSSFRL*ISPRRASASFS
Trigger: TGAGAATGAGGCCGAGGCCCTCCGTGGGGAGATCCAGAGCCTGAAGGAGGAGAACAACCGACAGCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356338.10
ENST00000399228.5
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS GCA 72 bp AAATACAAGTTTTCGTTGGTCAGCCGGGTGATCTCGTaGTGCAGGCTGGCCTCAATGCGGGCCTCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: KYKFSLVSRVIS*CRLASMRASGG
Trigger: GCCCCCAGAGGCCCGCATTGAGGCCAGCCTGCAGCACGAGATCACCCGGCTGACCAACGAAAACTTGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399228.5
ENST00000399233.7
ENST00000553916.5
CDS TCA 72 bp ACCACCTGCTTGATCAGTTCAGGGTCCATGCCATGCTaGCACATGACCGAGTGGAAGGAGTTGAGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: TTCLISSGSMPC*HMTEWKELSCR
Trigger: CCGGCAGCTCAACTCCTTCCACTCGGTCATGTGTCAGCATGGCATGGACCCTGAACTGATCAAGCAGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp CATCGGCGATACTGGAGGTTCGCTTTCTCAACCCTGTaGGCTTCACCCCAGACACGCCCTGAATCGTTTCAT +
Preference number: 6 (lower is better)
Translates to: HRRYWRFAFSTL*ASPQTRPESFH
Trigger: ATGAAACGATTCAGGGCGTGTCTGGGGTGAAGCCCACAGGGTTGAGAAAGCGAACCTCCAGTATCGCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp CGTGAAATGAAGCCCAGGCCGAGGCTGGCTGGAATCTaGATGGTTTCTAGTGCGAGGGAAGATGGGTTGAAA +
Preference number: 6 (lower is better)
Translates to: REMKPRPRLAGI*MVSSAREDGLK
Trigger: TTTCAACCCATCTTCCCTCGCACTAGAAACCATCCAGATTCCAGCCAGCCTCGGCCTGGGCTTCATTTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 72 bp TCAGACTCGTTGCTGCTGTGGGTGGAGTCTGTTCTCTaGTGTCCAGGCTTAGGCACATGCACCATAAGGGTC +
Preference number: 6 (lower is better)
Translates to: SDSLLLWVESVL*CPGLGTCTIRV
Trigger: GACCCTTATGGTGCATGTGCCTAAGCCTGGACACAAGAGAACAGACTCCACCCACAGCAGCAACGAGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS TCA 72 bp CAGCTCTGTGACCCGCTTCTGGAGCTTAAGGAACAATaGCATGTCCAGAGGTACCTTCTTCTCACTTGGTTC +
Preference number: 6 (lower is better)
Translates to: QLCDPLLELKEQ*HVQRYLLLTWF
Trigger: GAACCAAGTGAGAAGAAGGTACCTCTGGACATGTCATTGTTCCTTAAGCTCCAGAAGCGGGTCACAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 90 bp AAGATATATTCAGACTCGTTGCTGCTGTGGGTGGAGTCTGTTCTCTaGTGTCCAGGCTTAGGCACATGCACCATAAGGGTCATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: KIYSDSLLLWVESVL*CPGLGTCTIRVISS
Trigger: GGAAGAGATGACCCTTATGGTGCATGTGCCTAAGCCTGGACACAAGAGAACAGACTCCACCCACAGCAGCAACGAGTCTGAATATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp TCAGAGCTAAAGATATATTCAGACTCGTTGCTGCTGTaGGTGGAGTCTGTTCTCTTGTGTCCAGGCTTAGGC +
Preference number: 6 (lower is better)
Translates to: SELKIYSDSLLL*VESVLLCPGLG
Trigger: GCCTAAGCCTGGACACAAGAGAACAGACTCCACCCACAGCAGCAACGAGTCTGAATATATCTTTAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp CCCTTGGAAATCCTTTTCTTTCCTGGGAATGTTGACTaGTCGGATGGGTTCATCAATGATCTGTCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: PLEILFFPGNVD*SDGFINDLSWG
Trigger: TCCCCAGGACAGATCATTGATGAACCCATCCGACCAGTCAACATTCCCAGGAAAGAAAAGGATTTCCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp GTGACAGGAAAGATGTGTTTAGCATCCATGAGCAGCTaGGGAGAGTCTTTCCTGTCTCGTAAACGCATCTGT +
Preference number: 6 (lower is better)
Translates to: VTGKMCLASMSS*GESFLSRKRIC
Trigger: ACAGATGCGTTTACGAGACAGGAAAGACTCTCCCCAGCTGCTCATGGATGCTAAACACATCTTTCCTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 72 bp GGCTTAGGCACATGCACCATAAGGGTCATCTCTTCCTaGAGGTCATCATATCTTTCTTCCAGGCGACTGAAC +
Preference number: 6 (lower is better)
Translates to: GLGTCTIRVISS*RSSYLSSRRLN
Trigger: GTTCAGTCGCCTGGAAGAAAGATATGATGACCTCAAGGAAGAGATGACCCTTATGGTGCATGTGCCTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 90 bp TTGTGTCCAGGCTTAGGCACATGCACCATAAGGGTCATCTCTTCCTaGAGGTCATCATATCTTTCTTCCAGGCGACTGAACTCATTCAGA +
Preference number: 6 (lower is better)
Translates to: LCPGLGTCTIRVISS*RSSYLSSRRLNSFR
Trigger: TCTGAATGAGTTCAGTCGCCTGGAAGAAAGATATGATGACCTCAAGGAAGAGATGACCCTTATGGTGCATGTGCCTAAGCCTGGACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS TCA 72 bp GTTTCTGTCATCTCCTTAGCCTGCTGCACGATGCGGTaGTTGAGGGCTTCTTTTTCTTGCTTCAGCAAAGTA +
Preference number: 6 (lower is better)
Translates to: VSVISLACCTMR*LRASFSCFSKV
Trigger: TACTTTGCTGAAGCAAGAAAAAGAAGCCCTCAATCACCGCATCGTGCAGCAGGCTAAGGAGATGACAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 90 bp CAACAAGTATGTCAGGATTTCGTAAGTGAGGCAGCTCCTTGGTCTTaGGATCTAGATGGTATTCCAAATCCTTTCCTTCCTCGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: QQVCQDFVSEAAPWS*DLDGIPNPFLPRGE
Trigger: TTCACCTCGAGGAAGGAAAGGATTTGGAATACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGACATACTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS TCA 72 bp CTTTCTTCCAGGCGACTGAACTCATTCAGAAGGTTCTaGTATCTCAGCCTTTCATCATTAAGGTCGAGTTCC +
Preference number: 6 (lower is better)
Translates to: LSSRRLNSFRRF*YLSLSSLRSSS
Trigger: GGAACTCGACCTTAATGATGAAAGGCTGAGATATCAGAACCTTCTGAATGAGTTCAGTCGCCTGGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CCA 72 bp CAAGTATGTCAGGATTTCGTAAGTGAGGCAGCTCCTTaGTCTTTGGATCTAGATGGTATTCCAAATCCTTTC +
Preference number: 6 (lower is better)
Translates to: QVCQDFVSEAAP*SLDLDGIPNPF
Trigger: GAAAGGATTTGGAATACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGACATACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 72 bp TGGCTTCAGTTCCAGAATCAGGTTCTTAACAAGTTTTaGCTCATCCTCCTTCTTGTATTCCAGCATCCCTTG +
Preference number: 6 (lower is better)
Translates to: WLQFQNQVLNKF*LILLLVFQHPL
Trigger: CAAGGGATGCTGGAATACAAGAAGGAGGATGAGCAAAAACTTGTTAAGAACCTGATTCTGGAACTGAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS TCA 72 bp TCATTTTCACCAACAAGTATGTCAGGATTTCGTAAGTaGGGCAGCTCCTTGGTCTTTGGATCTAGATGGTAT +
Preference number: 6 (lower is better)
Translates to: SFSPTSMSGFRK*GSSLVFGSRWY
Trigger: ATACCATCTAGATCCAAAGACCAAGGAGCTGCCTCACTTACGAAATCCTGACATACTTGTTGGTGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS TCA 72 bp GATCATCATTCAGGTAGTCAGCATGTCGAACACACATaGACAGGATATATGCCGGTAATCCTGGAATCAAAT +
Preference number: 6 (lower is better)
Translates to: DHHSGSQHVEHT*TGYMPVILESN
Trigger: ATTTGATTCCAGGATTACCGGCATATATCCTGTTCATGTGTGTTCGACATGCTGACTACCTGAATGATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 72 bp TTTCAGTTTACGGACCGTCTTATCCTGTTTTTCAAGTaGTTCCATCAAATCCAAGTTTTCGTTGGTCAGCCG +
Preference number: 6 (lower is better)
Translates to: FQFTDRLILFFK*FHQIQVFVGQP
Trigger: CGGCTGACCAACGAAAACTTGGATTTGATGGAACAACTTGAAAAACAGGATAAGACGGTCCGTAAACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356338.10
ENST00000399229.6
ENST00000399231.7
CDS CAA 72 bp TTTGTACATCTTCCAAAAGTATTGTGGAATCTGTCATaGTATTCTTGTCATCCTTGGGTTGGATGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: FVHLPKVLWNLS*YSCHPWVGWPL
Trigger: AAGAGGCCATCCAACCCAAGGATGACAAGAATACAATGACAGATTCCACAATACTTTTGGAAGATGTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356338.10
ENST00000399231.7
ENST00000399233.7
ENST00000553916.5
CDS CAA 90 bp GCTTTGCATACATCCTGGATTAGAGTAAGCCTATCCATAGTTACCTaGCTTGATTTAAGAACTTTAATTTGTTCTTCAAAAACGGTGTCT +
Preference number: 6 (lower is better)
Translates to: ALHTSWIRVSLSIVT*LDLRTLICSSKTVS
Trigger: AGACACCGTTTTTGAAGAACAAATTAAAGTTCTTAAATCAAGCAAGGTAACTATGGATAGGCTTACTCTAATCCAGGATGTATGCAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469611.1