RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO3B (Homo sapiens)

Ensembl gene IDs: ENSG00000071909

Ensembl transcript IDs: ENST00000317935.10, ENST00000408978.9, ENST00000409044.7, ENST00000409940.6, ENST00000438642.6, ENST00000442690.1, ENST00000469359.1, ENST00000484338.6, ENST00000602629.1

Found 651 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATaGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGT +
Preference number: 1 (lower is better)
Translates to: GNYPVLGDLGANPPG*GTQQWSPDSGGGGS
Trigger: ACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR TCA 90 bp AGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTaGCCCCATATCAGTGCTTTCTTACGCAATGACAGACAGTCGATT +
Preference number: 1 (lower is better)
Translates to: SGSVRFRHGPYVQRS*PHISAFLRNDRQSI
Trigger: AATCGACTGTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR CCA 90 bp GGGAGAGTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTaGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTG +
Preference number: 1 (lower is better)
Translates to: GRVVEDRIRCFGICK*FSKVQAWTICPKKL
Trigger: CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCACTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR TCA 90 bp ATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATaGCAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATT +
Preference number: 1 (lower is better)
Translates to: ICPKKLTPYQCFLTQ*QTVDYHECSYSGQI
Trigger: AATCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR CCA 90 bp ATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCAGGCATaGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: IRCFGICKWFSKVQA*TICPKKLTPYQCFL
Trigger: AAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGATTCCAAAACATCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCAGGGCCCCATGGGATaGGAAAGGAAGGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: PILQDGALSNGALTLGEVQGPMG*ERKAAP
Trigger: GGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGAAAGGAAGGGTGGGCTaGGTTGTTCTCCTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: PILQDGALSNGALTLGEVKGRVG*VVLLRD
Trigger: ATCCCTGAGGAGAACAACTCAGCCCACCCTTCCTTT...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR-3UTR GCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCGCGCCCAGCTCAGGCTaGACAACACATGTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGAPSSG*TTHVGE
Trigger: CTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGC...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTATGTCCAAAGAAGCTaGCCCCATATCAGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDYVQRS*PHISAF
Trigger: GAAAGCACTGATATGGGGTCAGCTTCTTTGGACATA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAGGAAAGGAACTCCTaGGTCTCCACTGGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGQERNS*VSTGAD
Trigger: ATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR GCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGCGCCCAGCTCAGGCTaGACAACACATGTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: WTRSGPSTVATDSLMELFAPSSG*TTHVGE
Trigger: CTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGTATGTCCAAAGAAGCTaGCCCCATATCAGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLYVQRS*PHISAF
Trigger: GAAAGCACTGATATGGGGTCAGCTTCTTTGGACATA...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTATGATTAGACTGGGGTaGGACTGGCTGTTATCTTCC +
Preference number: 2 (lower is better)
Translates to: RVQERNSWVSTGADSEWIMIRLG*DWLLSS
Trigger: GGAAGATAACAGCCAGTCTCACCCCAGTCTAATCAT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGACAGTCGATTACCATaGATGTTCCTACTCTGGACA +
Preference number: 2 (lower is better)
Translates to: RVQERNSWVSTGADSEWIDSRLP*MFLLWT
Trigger: TGTCCAGAGTAGGAACATTCATGGTAATCGACTGTC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGTGCTTTCTTACGCAATaGCAGACAGTCGATTACCAT +
Preference number: 2 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLCFLTQ*QTVDYH
Trigger: ATGGTAATCGACTGTCTGTCATTGCGTAAGAAAGCA...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGGATACAGTCCACTGGTaGCAGAGATTTGTAATATTC +
Preference number: 2 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGDTVHW*QRFVIF
Trigger: GAATATTACAAATCTCTGTCACCAGTGGACTGTATC...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGATCCCACAGGGCCCCATaGGATGAGAAAGGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRSHRAP*DEKGRQ
Trigger: CTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGA...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR GCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTAGATGTTTTGGAATCTaGAAGTGGTTCAGTAAGGTT +
Preference number: 2 (lower is better)
Translates to: RVQERNSWVSTGADSEWIRCFGI*KWFSKV
Trigger: AACCTTACTGAACCACTTGCAGATTCCAAAACATCT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTATGTCCAAAGAAGCTaGCCCCATATCAGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLYVQRS*PHISAF
Trigger: GAAAGCACTGATATGGGGTCAGCTTCTTTGGACATA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCCAACTGAATGCTCCCTaGACTTCATCCCATAGCTAC +
Preference number: 2 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSQLNAP*TSSHSY
Trigger: GTAGCTATGGGATGAAGTTCAGGGAGCATTCAGTTG...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
3UTR-3UTR GCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTTTCTTGGCTTCCTCTTaGTCCCTTGATATTCTAGAG +
Preference number: 2 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPFLASS*SLDILE
Trigger: CTCTAGAATATCAAGGGAGCAAGAGGAAGCCAAGAA...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTAGTAAGGTTCAGGCATaGACCATATGTCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFSKVQA*TICPKK
Trigger: CTTCTTTGGACATATGGTCCATGCCTGAACCTTACT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR TCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTTTCCTCTTGCTCCCTTaGTATTCTAGAGTTCCATTT +
Preference number: 2 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPFLLLP*YSRVPF
Trigger: AAATGGAACTCTAGAATATCAAGGGAGCAAGAGGAA...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR-3UTR TCA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCCATAGTCACAGCAACTaGATGCTCCCTGAACTTCAT +
Preference number: 2 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSHSHSN*MLPELH
Trigger: ATGAAGTTCAGGGAGCATTCAGTTGCTGTGACTATG...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
3UTR-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTTTGGAATCTGCAAGTaGTTCAGTAAGGTTCAGGCA +
Preference number: 2 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLFGICK*FSKVQA
Trigger: TGCCTGAACCTTACTGAACCACTTGCAGATTCCAAA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGATGTTCTAGGAGATCTTaGGGCCAATCCTCCAGGATG +
Preference number: 2 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRCSRRS*GQSSRM
Trigger: CATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACA...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTCAAGTACTTTGATTTaGCCAAGTTTTCTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLSSTLI*PSFLGF
Trigger: GAAGCCAAGAAAACTTGGCCAAATCAAAGTACTTGA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACCCCATCAAGTACTTTaGTTTGGCCAAGTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRPHQVL*FGQVFL
Trigger: CAAGAAAACTTGGCCAAATCAAAGTACTTGATGGGG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTAGATGTTTTGGAATCTaGAAGTGGTTCAGTAAGGTT +
Preference number: 2 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSRCFGI*KWFSKV
Trigger: AACCTTACTGAACCACTTGCAGATTCCAAAACATCT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTAGACCTTAGGAGGACATaGTCTACAACAGAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLDLRRT*STTESS
Trigger: TGAACTTTCTGTTGTAGACCATGTCCTCCTAAGGTC...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
3UTR CCA 72 bp CCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATaGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGA +
Preference number: 3 (lower is better)
Translates to: PVLGDLGANPPG*GTQQWSPDSGG
Trigger: TCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR CCA 72 bp ATTGTAAAGGTGTTCTCAGTGTCCCACAGGGCCCCATaGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCT +
Preference number: 3 (lower is better)
Translates to: IVKVFSVSHRAP*DEKGRQRPAQA
Trigger: AGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCTTTACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGAAGGGTGGGCTGAGTaGTTCTCCTCAGGGATACAG +
Preference number: 3 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLEGWAE*FSSGIQ
Trigger: CTGTATCCCTGAGGAGAACAACTCAGCCCACCCTTC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR CCA 72 bp CCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTaGGGCCAATCCTCCAGGATGGGGCACTCAGCAATG +
Preference number: 3 (lower is better)
Translates to: PKHRQLSCSRRS*GQSSRMGHSAM
Trigger: CATTGCTGAGTGCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR CCA 72 bp TTTGGAATCTGCAAGTGGTTCAGTAAGGTTCAGGCATaGACCATATGTCCAAAGAAGCTGACCCCATATCAG +
Preference number: 3 (lower is better)
Translates to: FGICKWFSKVQA*TICPKKLTPYQ
Trigger: CTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTCCCCATCAAGTACTTaGATTTGGCCAAGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: WTRSGPSTVATDSLMELFSPSST*IWPSFL
Trigger: AAGAAAACTTGGCCAAATCAAAGTACTTGATGGGGA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317935.10
3UTR TCA 72 bp AAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATaGCAGACAGTCGATTACCATGAATGTTCCTACTCT +
Preference number: 3 (lower is better)
Translates to: KKLTPYQCFLTQ*QTVDYHECSYS
Trigger: AGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR CCA 72 bp TCCTTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTaGCAAGGTGAAATAAAGAGACAGAGGCTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: SFLFITKVVWVS*QGEIKRQRLSQ
Trigger: CTGAGAAAGCCTCTGTCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR TCA 72 bp TTGATAGGAAAAATCAAGCAATATTATCAGGGTCCATaGTTAGACTGGGGTGAGACTGGCTGTTATCTTCCT +
Preference number: 3 (lower is better)
Translates to: LIGKIKQYYQGP*LDWGETGCYLP
Trigger: AGGAAGATAACAGCCAGTCTCACCCCAGTCTAATCATGGACCCTGATAATATTGCTTGATTTTTCCTATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
3UTR-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTATCAAGTACTTTGATTaGGCCAAGTTTTCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSIKYFD*AKFSWL
Trigger: AAGCCAAGAAAACTTGGCCAAATCAAAGTACTTGAT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317935.10
CDS-3UTR CCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCCTGTGGAGCGGAGCTaGGCCAGCACCCTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVPVERS*ASTLSR
Trigger: TCGAGAGAGGGTGCTGGCCCAGCTCCGCTCCACAGG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGGGCCCCATGGGATaGGAAAGGAAGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAQGPMG*ERKAAP
Trigger: GGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACTCGCCCAGGCTGGAGTaGAGTGGTGCGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNSPRLE*SGALSA
Trigger: AGCTGAGAGCGCACCACTGCACTCCAGCCTGGGCGA...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR TCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGGCTCGCTGCAGTCTTaGACCTCGGCACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAGSLQS*TSALPL
Trigger: GAGGGGAAGTGCCGAGGTTCAAGACTGCAGCGAGCC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGTCACCAGGCTCGCTaGAGTCTTGAACCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVGHQAR*SLEPRH
Trigger: GTGCCGAGGTTCAAGACTGCAGCGAGCCTGGTGACC...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGAACTCCTGACTTCATaGTCCGCCCATCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVELLTS*SAHLGL
Trigger: GAGGCCAAGATGGGCGGATCATGAAGTCAGGAGTTC...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACCTCTCTCGAGAGAACTaGAGGGCCTCTCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNLSREN*RASRSS
Trigger: TGATGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAG...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGGTCAAGGAGATGTGTaGCGGAAGGTCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNGQGDV*RKVAFQ
Trigger: TTGAAAGGCGACCTTCCGTCACACATCTCCTTGACC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGTCAAGGAGATGTGTaGCGGAAGGTCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVGQGDV*RKVAFQ
Trigger: TTGAAAGGCGACCTTCCGTCACACATCTCCTTGACC...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACAAAGGAAGGGTGGGCTaGGTTGTTCTCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNKGRVG*VVLLRD
Trigger: ATCCCTGAGGAGAACAACTCAGCCCACCCTTCCTTT...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCCATCCAGAACGGGGTaGCAACAGATGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDPSRTG*QQMCFS
Trigger: GGAGAAACACATCTGTTGGCACCCCGTTCTGGATGG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCCATCCAGAACGGGGTaGCAACAGATGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVPSRTG*QQMCFS
Trigger: GGAGAAACACATCTGTTGGCACCCCGTTCTGGATGG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCAGGGTCTGGTCAGTTaGTTGGGGAAACCGACTTTC +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDQGLVS*LGKPTF
Trigger: GAAAGTCGGTTTCCCCAAGCAACTGACCAGACCCTG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCCCTTGGTATATGCCTaGAGCACAACCACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDPLVYA*STTTLP
Trigger: AGGCAGAGTGGTTGTGCTGCAGGCATATACCAAGGG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGCTTCATCCAACCGCTaGCCACATCTGAGTAGACCT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNASSNR*PHLSRP
Trigger: AGGTCTACTCAGATGTGGCCAGCGGTTGGATGAAGC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACATGCAGCGCACAAAGTaGGGCTGTCCAACCACCATT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNMQRTK*GCPTTI
Trigger: AATGGTGGTTGGACAGCCCCACTTTGTGCGCTGCAT...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGGAAAGGAACTCCTaGGTCTCCACTGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAQERNS*VSTGAD
Trigger: ATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGGACAAGCTCAGTGACTaGGCCCCCATTACACAGCTC +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEDKLSD*APITQL
Trigger: GAGCTGTGTAATGGGGGCTCAGTCACTGAGCTTGTC...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGATGTACAGAGCCCCTaGGAACTTTATGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNDVQSP*ELYGHQ
Trigger: CTGGTGACCATAAAGTTCTCAGGGGCTCTGTACATC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGCCCATTTTTCTCTGTaGCAGCAGGAGAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNAHFSL*QQESCL
Trigger: CAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGGC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGAGCATTTTGGGCTGCTaGCATCGTCGGCGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVESILGC*HRRRGV
Trigger: AACACCTCGCCGACGATGTCAGCAGCCCAAAATGCT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTCCCTGTCACCAAAGTaGCAGGTCCAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDSLSPK*QVQTFP
Trigger: AGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGTGGTTTCTTCCGGATaGCGTATCACCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAVVSSG*RITSRV
Trigger: CACTCTGGAGGTGATACGGCATCCGGAAGAAACCAC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCCTGTGGAGCGGAGCTaGGCCAGCACCCTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIPVERS*ASTLSR
Trigger: TCGAGAGAGGGTGCTGGCCCAGCTCCGCTCCACAGG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACCAATCCTTGCTGATCTaGAGCAGGATGGCATATCCG +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNQSLLI*SRMAYP
Trigger: CGGATATGCCATCCTGCTCCAGATCAGCAAGGATTG...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGGGCTACTCAGCATTTTaGGCTGCTGACATCGTCGGC +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEGYSAF*AADIVG
Trigger: GCCGACGATGTCAGCAGCCCAAAATGCTGAGTAGCC...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACTGTTCTAGGAGATCTTaGGGCCAATCCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNCSRRS*GQSSRM
Trigger: CATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACA...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTGTTCTAGGAGATCTTaGGGCCAATCCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDCSRRS*GQSSRM
Trigger: CATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATACTGGTGAGTTGAGCTaGAACACCAAAGTCAACGAG +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDTGELS*NTKVNE
Trigger: CTCGTTGACTTTGGTGTTTCAGCTCAACTCACCAGT...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACTTTGGTCAGAGGGATTaGGAAGAGCTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNFGQRD*EELLKK
Trigger: CTTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAA...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCAACCACTCTGCCTATaGCTTCTCGAAGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDQPLCL*LLEAAN
Trigger: ATTTGCTGCTTCGAGAAGTCATAGGCAGAGTGGTTG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGCCCATTTTTCTCTGTaGCAGCAGGAGAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAAHFSL*QQESCL
Trigger: CAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGGC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATGGTGTCTTGGCAAGGTaGAATAAAGAGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDGVLAR*NKETEA
Trigger: AGCCTCTGTCTCTTTATTTCACCTTGCCAAGACACC...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCTCCCTGTCACCAAAGTaGCAGGTCCAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSASLSPK*QVQTFP
Trigger: AGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGA...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACAGAGGCAGCATTTTaGAAAGCTTCAGCATTGGGC +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNTEAAF*KASALG
Trigger: GCCCAATGCTGAAGCTTTGCAAAATGCTGCCTCTGT...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGACTTCCCCTCGTACCTaGTGCGACGGGGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLTSPRT*CDGGMW
Trigger: CCACATTCCCCCGTCGCAGCAGGTACGAGGGGAAGT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGCGCCCAGCTCAGGCTaGACAACACATGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLAPSSG*TTHVGE
Trigger: CTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATGGTCTTGGAGAACCTTaGCCAGCTGTTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDGLGEP*PAVFAE
Trigger: TTCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACC...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGTGTACGGCCATTGTTaGATTCTGCTTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNVYGHC*ILLVNG
Trigger: GCCATTCACAAGCAGAATCCAACAATGGCCGTACAC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGTGGGGCACTCAGCAATaGAGCCCTGACTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGWGTQQ*SPDSGG
Trigger: TCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCA...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACTGTGGGATCTGGAAGTaGTTCAAGTCCAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNCGIWK*FKSKHH
Trigger: ATGATGCTTGGACTTGAATCACTTCCAGATCCCACA...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGTTGTTGTGCAAATGCTaGAGGCCCAAGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGLLCKC*RPKRAP
Trigger: CGGGGCCCTCTTGGGCCTTCAGCATTTGCACAACAA...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGTCACATCACGGTGGATaGTTCGGTTGTTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVSHHGG*FGCCAN
Trigger: ATTTGCACAACAACCGAATCATCCACCGTGATGTGA...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTGCTCACAGGCAATaGCCTCAGGGGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIAAHRQ*PQGPSR
Trigger: TCTGGATGGCCCCTGAGGTCATTGCCTGTGAGCAGC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATAAGAAAGTCAAATGCTaGACAATCAGGTGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDKKVKC*TIRWAL
Trigger: AAGCGCCCACCTGATTGTTCAGCATTTGACTTTCTT...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACCTTCCACCAGGGAGTTaGCTTGTAGAATTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNLPPGS*LVEFSL
Trigger: GAGAGAAAATTCTACAAGTCAACTCCCTGGTGGAAG...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCAAAATTCTGTACACTaGGTGCACCTCTTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVQNSVH*VHLFVR
Trigger: ACGGACAAAGAGGTGCACTCAGTGTACAGAATTTTG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTTTCCCAGTACCCAGTaGTCTAATCTGGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDFPSTQ*SNLDFS
Trigger: GGAAAAGTCCAGATTAGATCACTGGGTACTGGGAAA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGACAGTCGATTACCATaGATGTTCCTACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNDSRLP*MFLLWT
Trigger: TGTCCAGAGTAGGAACATTCATGGTAATCGACTGTC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCACAGAGGCAGCATTTTaGAAAGCTTCAGCATTGGGC +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSATEAAF*KASALG
Trigger: GCCCAATGCTGAAGCTTTGCAAAATGCTGCCTCTGT...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACCTGATGACAATGCACTaGTCTTTGCTGAGAGTAACC +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNLMTMH*SLLRVT
Trigger: GGTTACTCTCAGCAAAGACCAGTGCATTGTCATCAG...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCTGATGACAATGCACTaGTCTTTGCTGAGAGTAACC +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDLMTMH*SLLRVT
Trigger: GGTTACTCTCAGCAAAGACCAGTGCATTGTCATCAG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATACTGGTTATAGTACATaGTGTCCTCAGGGCTACTCA +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDTGYST*CPQGYS
Trigger: TGAGTAGCCCTGAGGACACCATGTACTATAACCAGT...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTCCCACAGGGCCCCATaGGATGAGAAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSHRAP*DEKGRQ
Trigger: CTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCTGTGCACACAAAGATaGACAAGATCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSALCTQR*TRSGPS
Trigger: GGAAGGACCTGATCTTGTCCATCTTTGTGTGCACAG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTTAGCAACAGGATTTTaGTGCTTCTGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDLATGF*CFWSWR
Trigger: TCTCCAAGACCAGAAGCATCAAAATCCTGTTGCTAA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCTTCTCTCTCAAGGTCTaGTTATTGGCCTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAFSLKV*LLAFPK
Trigger: CTTGGGAAAGGCCAATAATCAGACCTTGAGAGAGAA...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGAGCATTTTGGGCTGCTaGCATCGTCGGCGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLSILGC*HRRRGV
Trigger: AACACCTCGCCGACGATGTCAGCAGCCCAAAATGCT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCAGGGCCCCATGGGATaGGAAAGGAAGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLQGPMG*ERKAAP
Trigger: GGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGAGTGTTTTCACAGGATaGATGTCAAAGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVESVFTG*MSKRGG
Trigger: CCCTCCCCTCTTTGACATGCATCCTGTGAAAACACT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGTTGGAAGTTATGTCGTaGATCACCCTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVLEVMS*ITLPVS
Trigger: TGAAACTGGAAGGGTGATGCACGACATAACTTCCAA...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGATTCTTCAAAAAGGATaGGGTGGGAATAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEILQKG*GGNSPG
Trigger: GCCAGGGCTATTCCCACCGCATCCTTTTTGAAGAAT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGGGTCTTGGAGAACCTTaGCCAGCTGTTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEGLGEP*PAVFAE
Trigger: TTCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACC...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCATGATAAGGTCTTCTaGTATGCATCCTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAHDKVF*YASSHA
Trigger: GGCATGAGAGGATGCATACCAGAAGACCTTATCATG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTACAGGGCTTTGGACATaGCGTCTCGAACGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWITGLWT*RLERPQ
Trigger: CTGCGGACGTTCGAGACGCCATGTCCAAAGCCCTGT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACTGGATTTGCTCATTaGCGATGTTTATGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNTGFAH*RCLCRA
Trigger: AGCTCTGCATAAACATCGCCAATGAGCAAATCCAGT...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCTGTGGAGCGGAGCTaGGCCAGCACCCTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPPVERS*ASTLSR
Trigger: TCGAGAGAGGGTGCTGGCCCAGCTCCGCTCCACAGG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCCCTGAGAACTTTATaGTCACCAGGCTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGPLRTL*SPGSLQ
Trigger: CTGCAGCGAGCCTGGTGACCATAAAGTTCTCAGGGG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCCCCTGAGAACTTTATaGTCACCAGGCTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGPLRTL*SPGSLQ
Trigger: CTGCAGCGAGCCTGGTGACCATAAAGTTCTCAGGGG...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCGGCTACTCAGCATTTTaGGCTGCTGACATCGTCGGC +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGGYSAF*AADIVG
Trigger: GCCGACGATGTCAGCAGCCCAAAATGCTGAGTAGCC...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCAGGAAAGGAACTCCTaGGTCTCCACTGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLQERNS*VSTGAD
Trigger: ATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCCAATCCTCCAGGATaGGGCACTCAGCAATGGAGC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIANPPG*GTQQWS
Trigger: GCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGGC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTCCAGGCTGACTGGATaGCAATGGCTCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSRLTG*QWLPSL
Trigger: GAGAGAAGGGAGCCATTGCCATCCAGTCAGCCTGGA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGACAAGCTCAGTGACTaGGCCCCCATTACACAGCTC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIDKLSD*APITQL
Trigger: GAGCTGTGTAATGGGGGCTCAGTCACTGAGCTTGTC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGTTCTCTCTCAAGGTCTaGTTATTGGCCTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEFSLKV*LLAFPK
Trigger: CTTGGGAAAGGCCAATAATCAGACCTTGAGAGAGAA...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGGGCTCGAGTTGTCATTaGTGGCAGTGCATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGGSSCH*WQCMSS
Trigger: GGAACTCATGCACTGCCATCAATGACAACTCGAGCC...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGGCTCGAGTTGTCATTaGTGGCAGTGCATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLGSSCH*WQCMSS
Trigger: GGAACTCATGCACTGCCATCAATGACAACTCGAGCC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGGATTCACAATCCAGCTaGAGAGCCTCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGDSQSS*RASHTG
Trigger: CCCTGTATGGGAGGCTCTTCAGCTGGATTGTGAATC...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGATACAGTCCACTGGTaGCAGAGATTTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVDTVHW*QRFVIF
Trigger: GAATATTACAAATCTCTGTCACCAGTGGACTGTATC...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGAAAGGAAGGGTGGGCTaGGTTGTTCTCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGKGRVG*VVLLRD
Trigger: ATCCCTGAGGAGAACAACTCAGCCCACCCTTCCTTT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGGACAGTCGATTACCATaGATGTTCCTACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEDSRLP*MFLLWT
Trigger: TGTCCAGAGTAGGAACATTCATGGTAATCGACTGTC...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGTATGTCCAAAGAAGCTaGCCCCATATCAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEYVQRS*PHISAF
Trigger: GAAAGCACTGATATGGGGTCAGCTTCTTTGGACATA...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTTGAGAGGAAATAGCTaGGAACTCAATGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDLRGNS*ELNVPN
Trigger: ATTGGGAACATTGAGTTCGCAGCTATTTCCTCTCAA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCGTGGTTTCTTCCGGATaGCGTATCACCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGVVSSG*RITSRV
Trigger: CACTCTGGAGGTGATACGGCATCCGGAAGAAACCAC...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACTTCTGTAAGACTCCTTaGAAGTTATGTCGTGCATCA +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNFCKTP*KLCRAS
Trigger: TGATGCACGACATAACTTCCAAGGAGTCTTACAGAA...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGATGCAGCGCACAAAGTaGGGCTGTCCAACCACCATT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLMQRTK*GCPTTI
Trigger: AATGGTGGTTGGACAGCCCCACTTTGTGCGCTGCAT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTGTCCCCTGACTGGATaGCAATGGCTCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWICPLTG*QWLPSL
Trigger: GAGAGAAGGGAGCCATTGCCATCCAGTCAGGGGACA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGCCTTTTGGAGAACTCTaGGCTTGTGAATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEPFGEL*ACECPF
Trigger: AAATGGGCATTCACAAGCCCAGAGTTCTCCAAAAGG...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCCACTGATAGCCTCATaGAGTTATTTGACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAPLIAS*SYLTSE
Trigger: TTCACTGGTCAAATAACTCCATGAGGCTATCAGTGG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGCTGCTCACAGGCAATaGCCTCAGGGGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFAAHRQ*PQGPSR
Trigger: TCTGGATGGCCCCTGAGGTCATTGCCTGTGAGCAGC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGTCAAGGAGATGTGTaGCGGAAGGTCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIGQGDV*RKVAFQ
Trigger: TTGAAAGGCGACCTTCCGTCACACATCTCCTTGACC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGTTAGCAACAGGATTTTaGTGCTTCTGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVELATGF*CFWSWR
Trigger: TCTCCAAGACCAGAAGCATCAAAATCCTGTTGCTAA...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCATCCTGAAGCAATGCTaGATTGCTTCGAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAILKQC*IASNCL
Trigger: AAGACAATTCGAAGCAATTCAGCATTGCTTCAGGAT...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAGCAGGAGAGTTGCTTaGAGTCTGTGTACGGCCATT +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSRRVA*SLCTAI
Trigger: AATGGCCGTACACAGACTTCAAGCAACTCTCCTGCT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGAGCAGGAGAGTTGCTTaGAGTCTGTGTACGGCCATT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLSRRVA*SLCTAI
Trigger: AATGGCCGTACACAGACTTCAAGCAACTCTCCTGCT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACAGGGCCCCATGGGATaGGAAAGGAAGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRQGPMG*ERKAAP
Trigger: GGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTCCCTGTCACCAAAGTaGCAGGTCCAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSLSPK*QVQTFP
Trigger: AGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGAGTTACAGAATAAAGTaGCCTGGACTTTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVESYRIK*PGLSLS
Trigger: TGACAGGGAAAGTCCAGGTCACTTTATTCTGTAACT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGATGTTTTCGTCTGGCTaGAGGAGTGTATTAATGCGA +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEMFSSG*RSVLMR
Trigger: TCGCATTAATACACTCCTGCAGCCAGACGAAAACAT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTACTTCCCCTCGTACCTaGTGCGACGGGGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPTSPRT*CDGGMW
Trigger: CCACATTCCCCCGTCGCAGCAGGTACGAGGGGAAGT...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTACTTCCCCTCGTACCTaGTGCGACGGGGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFTSPRT*CDGGMW
Trigger: CCACATTCCCCCGTCGCAGCAGGTACGAGGGGAAGT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCGGCGAGGTGTTCGATaGTTCTGTGCAAGACCATTT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLRRGVR*FCARPF
Trigger: AAATGGTCTTGCACAGAAGCATCGAACACCTCGCCG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGCGCCCAGCTCAGGCTaGACAACACATGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFAPSSG*TTHVGE
Trigger: CTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCCCTTCACATCACGGTaGATGATTCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGPFTSR*MIRLLC
Trigger: GCACAACAACCGAATCATCCACCGTGATGTGAAGGG...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCCTTCACATCACGGTaGATGATTCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGPFTSR*MIRLLC
Trigger: GCACAACAACCGAATCATCCACCGTGATGTGAAGGG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTACTCCTTTAATAAATaGGTGGTCAAGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDYSFNK*VVKEMC
Trigger: ACACATCTCCTTGACCACCCATTTATTAAAGGAGTA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCATCACAACTCCAGTTaGTGTAAACATCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAHHNSS*CKHHFQ
Trigger: CTGGAAATGATGTTTACACCAACTGGAGTTGTGATG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGATCCTAGCTCTTGTCTaGGCCAAATTACCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEILALV*AKLPVL
Trigger: CAAAACAGGTAATTTGGCCCAGACAAGAGCTAGGAT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTCTCCAGAATCCCTGTaGAGCGGAGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLSPESL*SGAGPA
Trigger: TGCTGGCCCAGCTCCGCTCCACAGGGATTCTGGAGA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTTCTCCAGAATCCCTGTaGAGCGGAGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPSPESL*SGAGPA
Trigger: TGCTGGCCCAGCTCCGCTCCACAGGGATTCTGGAGA...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCAATCCTTGCTGATCTaGAGCAGGATGGCATATCCG +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLQSLLI*SRMAYP
Trigger: CGGATATGCCATCCTGCTCCAGATCAGCAAGGATTG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTTGGGGCACTCAGCAATaGAGCCCTGACTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFWGTQQ*SPDSGG
Trigger: TCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCA...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGGGGCACTCAGCAATaGAGCCCTGACTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQWGTQQ*SPDSGG
Trigger: TCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTCTGTTCTAGAGAAATaGTCTTATAGGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDSVLEK*SYRASL
Trigger: CAAAGAAGCCCTATAAGACCATTTCTCTAGAACAGA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTTTGTTGTGCAAATGCTaGAGGCCCAAGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPLLCKC*RPKRAP
Trigger: CGGGGCCCTCTTGGGCCTTCAGCATTTGCACAACAA...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCACTGGTGAGTTGAGCTaGAACACCAAAGTCAACGAG +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGTGELS*NTKVNE
Trigger: CTCGTTGACTTTGGTGTTTCAGCTCAACTCACCAGT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCCAGAACCTCTAGGTTaGCCAAATCATCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIPEPLG*PNHPQG
Trigger: GCCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGTTTGGTCAGAGGGATTaGGAAGAGCTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLFGQRD*EELLKK
Trigger: CTTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAA...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCTAGCAAGAGGTGTTTaGTGTGCTGTGAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGLARGV*CAVNAK
Trigger: CTTGGCATTCACAGCACATCAAACACCTCTTGCTAG...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAACCACTCTGCCTATaGCTTCTCGAAGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGQPLCL*LLEAAN
Trigger: ATTTGCTGCTTCGAGAAGTCATAGGCAGAGTGGTTG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTCTCTCTCTTCTCTCTaGCCCTTTTGTATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSLSSL*PFCISW
Trigger: CCAGGAGATACAAAAGGGTCAGAGAGAAGAGAGAGA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAGGCTCGCTGCAGTCTTaGACCTCGGCACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRGSLQS*TSALPL
Trigger: GAGGGGAAGTGCCGAGGTTCAAGACTGCAGCGAGCC...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGATGATTAGACTGGGGTaGGACTGGCTGTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGMIRLG*DWLLSS
Trigger: GGAAGATAACAGCCAGTCTCACCCCAGTCTAATCAT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGGTGTCTTGGCAAGGTaGAATAAAGAGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLGVLAR*NKETEA
Trigger: AGCCTCTGTCTCTTTATTTCACCTTGCCAAGACACC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGGAAGAGTCATACTGCTaGTCACAGGCAATGACCTCA +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGEESYC*SQAMTS
Trigger: TGAGGTCATTGCCTGTGAGCAGCAGTATGACTCTTC...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGAAGCAATGCTGAATTaGTTCGAATTGTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAEAMLN*FELSSV
Trigger: TACAGAAGACAATTCGAAGCAATTCAGCATTGCTTC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCAAGAGGTGTTTGATGTaGTGTGAATGCCAAGTAATA +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAKRCLM*CECQVI
Trigger: TATTACTTGGCATTCACAGCACATCAAACACCTCTT...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTTCCCCTCGTACCTGCTaGGACGGGGGAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVSPRTC*DGGMWP
Trigger: GGGCCACATTCCCCCGTCGCAGCAGGTACGAGGGGA...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTCCCCTCGTACCTGCTaGGACGGGGGAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSSPRTC*DGGMWP
Trigger: GGGCCACATTCCCCCGTCGCAGCAGGTACGAGGGGA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTGGTCACCAGGCTCGCTaGAGTCTTGAACCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLGHQAR*SLEPRH
Trigger: GTGCCGAGGTTCAAGACTGCAGCGAGCCTGGTGACC...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCATTCCTGTCAGATATaGTTGTGTAACTTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVHSCQI*LCNLVK
Trigger: CTTAACTAAGTTACACAAGCATATCTGACAGGAATG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACAGGTGGAGGATTTCTTaGAATCTTAAAGAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNRWRIS*NLKECF
Trigger: AAAACACTCTTTAAGATTCCAAGAAATCCTCCACCT...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCACTGTGAAATAAAGTaGTTGAATTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: PILQDGALSNGALTLGEVHCEIK*LNSSHH
Trigger: ATGGTGTGAAGAATTCAACCACTTTATTTCACAGTG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCTACTCCTTTAATAAATaGGTGGTCAAGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAYSFNK*VVKEMC
Trigger: ACACATCTCCTTGACCACCCATTTATTAAAGGAGTA...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTACAGGGCTTTGGACATaGCGTCTCGAACGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPTGLWT*RLERPQ
Trigger: CTGCGGACGTTCGAGACGCCATGTCCAAAGCCCTGT...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGTTTGCCTCTTCATGTTaGTGGTTTCTTCCGGATGCC +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLFASSC*WFLPDA
Trigger: GGCATCCGGAAGAAACCACCAACATGAAGAGGCAAA...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTCTCCAGAATCCCTGTaGAGCGGAGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDSPESL*SGAGPA
Trigger: TGCTGGCCCAGCTCCGCTCCACAGGGATTCTGGAGA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTGTGCACACAAAGATaGACAAGATCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLLCTQR*TRSGPS
Trigger: GGAAGGACCTGATCTTGTCCATCTTTGTGTGCACAG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCTCTCCAGGCTGACTaGATGGCAATGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPPLQAD*MAMAPF
Trigger: GAAGGGAGCCATTGCCATCCAGTCAGCCTGGAGAGG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGACAAGCTCAGTGACTaGGCCCCCATTACACAGCTC +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFDKLSD*APITQL
Trigger: GAGCTGTGTAATGGGGGCTCAGTCACTGAGCTTGTC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTGCTGCTCACAGGCAATaGCCTCAGGGGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LKVTIPRVRLSINRSSAIAAHRQ*PQGPSR
Trigger: TCTGGATGGCCCCTGAGGTCATTGCCTGTGAGCAGC...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGAAGAAAGTCAAATGCTaGACAATCAGGTGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGKKVKC*TIRWAL
Trigger: AAGCGCCCACCTGATTGTTCAGCATTTGACTTTCTT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGAAGAAGCTTGTTTTCTaGCGTTCTCAGGACCACAAC +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGKKLVF*RSQDHN
Trigger: GTTGTGGTCCTGAGAACGTCAGAAAACAAGCTTCTT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGAGAACTCTGGGCTTGTaGATGCCCATTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGRTLGL*MPIFLC
Trigger: ACAGAGAAAAATGGGCATTCACAAGCCCAGAGTTCT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGTGTCTTGGCAAGGTaGAATAAAGAGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIGVLAR*NKETEA
Trigger: AGCCTCTGTCTCTTTATTTCACCTTGCCAAGACACC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTAGTGTTTTCACAGGATaGATGTCAAAGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWISVFTG*MSKRGG
Trigger: CCCTCCCCTCTTTGACATGCATCCTGTGAAAACACT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTCTCTCGAGAGAACTaGAGGGCCTCTCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFLSREN*RASRSS
Trigger: TGATGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAG...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTCCCCTCGTACCTGCTaGGACGGGGGAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVSPRTC*DGGMWP
Trigger: GGGCCACATTCCCCCGTCGCAGCAGGTACGAGGGGA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTCTGGGCTTGTGAATaGCCATTTTTCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLLWACE*PFFSVT
Trigger: TGTCACAGAGAAAAATGGGCATTCACAAGCCCAGAG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTTGTTTGCATGTCCTaGGAAGATATCGCACCCTTT +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGLVCMS*EDIAPF
Trigger: AAAGGGTGCGATATCTTCGCAGGACATGCAAACAAG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTTGTTTGCATGTCCTaGGAAGATATCGCACCCTTT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLLVCMS*EDIAPF
Trigger: AAAGGGTGCGATATCTTCGCAGGACATGCAAACAAG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGAGATGTTTTGGAATCTaGAAGTGGTTCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVERCFGI*KWFSKV
Trigger: AACCTTACTGAACCACTTGCAGATTCCAAAACATCT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTTTCCCAGGTGTCTGTaGGATCTGGAAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGFPRCL*DLEVIQ
Trigger: TTGAATCACTTCCAGATCCCACAGACACCTGGGAAA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTGATGACAATGCACTaGTCTTTGCTGAGAGTAACC +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGLMTMH*SLLRVT
Trigger: GGTTACTCTCAGCAAAGACCAGTGCATTGTCATCAG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGAAGTGTCCCCTGACTaGATGGCAATGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQEVSPD*MAMAPF
Trigger: GAAGGGAGCCATTGCCATCCAGTCAGGGGACACTTC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTGAAGTGTCCCCTGACTaGATGGCAATGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPEVSPD*MAMAPF
Trigger: GAAGGGAGCCATTGCCATCCAGTCAGGGGACACTTC...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCCCCTGAGAACTTTATaGTCACCAGGCTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFPLRTL*SPGSLQ
Trigger: CTGCAGCGAGCCTGGTGACCATAAAGTTCTCAGGGG...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCACTGGTTATAGTACATaGTGTCCTCAGGGCTACTCA +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGTGYST*CPQGYS
Trigger: TGAGTAGCCCTGAGGACACCATGTACTATAACCAGT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGATCACCAAAGTAGTGTaGGTGTCTTGGCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLITKVV*VSWQGE
Trigger: TTCACCTTGCCAAGACACCCACACTACTTTGGTGAT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCTGTGCACACAAAGATaGACAAGATCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWILCTQR*TRSGPS
Trigger: GGAAGGACCTGATCTTGTCCATCTTTGTGTGCACAG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCCGTACAAGATGTATaGGATCATTGCTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGPVQDV*DHCFIQ
Trigger: TTGGATGAAGCAATGATCTCATACATCTTGTACGGG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCTTGTTGTGCAAATGCTaGAGGCCCAAGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSLLCKC*RPKRAP
Trigger: CGGGGCCCTCTTGGGCCTTCAGCATTTGCACAACAA...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGATTCACAATCCAGCTaGAGAGCCTCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFDSQSS*RASHTG
Trigger: CCCTGTATGGGAGGCTCTTCAGCTGGATTGTGAATC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTAAGAAGCTTGTTTTCTaGCGTTCTCAGGACCACAAC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIKKLVF*RSQDHN
Trigger: GTTGTGGTCCTGAGAACGTCAGAAAACAAGCTTCTT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTGGCTCGCTGCAGTCTTaGACCTCGGCACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVGSLQS*TSALPL
Trigger: GAGGGGAAGTGCCGAGGTTCAAGACTGCAGCGAGCC...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTAGAACTCTGGGCTTGTaGATGCCCATTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIRTLGL*MPIFLC
Trigger: ACAGAGAAAAATGGGCATTCACAAGCCCAGAGTTCT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAGCATTTTGGGCTGCTaGCATCGTCGGCGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLSILGC*HRRRGV
Trigger: AACACCTCGCCGACGATGTCAGCAGCCCAAAATGCT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCCCCATCAAGTACTTTaGTTTGGCCAAGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGPHQVL*FGQVFL
Trigger: CAAGAAAACTTGGCCAAATCAAAGTACTTGATGGGG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTAAAGGAAGGGTGGGCTaGGTTGTTCTCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPKGRVG*VVLLRD
Trigger: ATCCCTGAGGAGAACAACTCAGCCCACCCTTCCTTT...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTGCTTTCTTACGCAATaGCAGACAGTCGATTACCAT +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGCFLTQ*QTVDYH
Trigger: ATGGTAATCGACTGTCTGTCATTGCGTAAGAAAGCA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAGTTACAGAATAAAGTaGCCTGGACTTTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSYRIK*PGLSLS
Trigger: TGACAGGGAAAGTCCAGGTCACTTTATTCTGTAACT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTGAACTCCTGACTTCATaGTCCGCCCATCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLELLTS*SAHLGL
Trigger: GAGGCCAAGATGGGCGGATCATGAAGTCAGGAGTTC...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCCCTTGGTATATGCCTaGAGCACAACCACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFPLVYA*STTTLP
Trigger: AGGCAGAGTGGTTGTGCTGCAGGCATATACCAAGGG...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTCCACCCCTTGGTATATaGCTGCAGCACAACCACTCT +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFPPLGI*LQHNHS
Trigger: AGAGTGGTTGTGCTGCAGGCATATACCAAGGGGTGG...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGGGAATGTGGCCCACTaGTTTGGTTTGAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFGNVAH*FGLKCP
Trigger: GGGACACTTCAAACCAAAGCAGTGGGCCACATTCCC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGGGAATGTGGCCCACTaGTTTGGTTTGAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFGNVAH*FGLKCP
Trigger: GGGACACTTCAAACCAAAGCAGTGGGCCACATTCCC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTAACCGAGTGCTTGTTTaGATGTCCTGCGAAGATATC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWINRVLV*MSCEDI
Trigger: GATATCTTCGCAGGACATGCAAACAAGCACTCGGTT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAGCGCTCTCAGCTGACTaGAACCTTTGCTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRALSAD*NLCFPG
Trigger: ACCCGGGAAGCAAAGGTTGCAGTCAGCTGAGAGCGC...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGCTTCATCCAACCGCTaGCCACATCTGAGTAGACCT +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQASSNR*PHLSRP
Trigger: AGGTCTACTCAGATGTGGCCAGCGGTTGGATGAAGC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCATGATAAGGTCTTCTaGTATGCATCCTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIHDKVF*YASSHA
Trigger: GGCATGAGAGGATGCATACCAGAAGACCTTATCATG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTTCCCATACAGGGCTTTaGACATGGCGTCTCGAACGT +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFSHTGL*TWRLER
Trigger: ACGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGA...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTAGTCCCAGGGGTTTCTaGAGGAACATGTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFSPRGF*RNMSKS
Trigger: GCTCTTGGACATGTTCCTCCAGAAACCCCTGGGACT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTGTCCCCTGACTGGATaGCAATGGCTCCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLCPLTG*QWLPSL
Trigger: GAGAGAAGGGAGCCATTGCCATCCAGTCAGGGGACA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGTGGCCCACTGCTTTaGTTTGAAGTGTCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQCGPLL*FEVSPD
Trigger: GTCAGGGGACACTTCAAACCAAAGCAGTGGGCCACA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCCTTTTGGAGAACTCTaGGCTTGTGAATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIPFGEL*ACECPF
Trigger: AAATGGGCATTCACAAGCCCAGAGTTCTCCAAAAGG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGTAGTGTGGGTGTCTTaGCAAGGTGAAATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLVVWVS*QGEIKR
Trigger: TCTCTTTATTTCACCTTGCCAAGACACCCACACTAC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTATCACCAAAGTAGTGTaGGTGTCTTGGCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIITKVV*VSWQGE
Trigger: TTCACCTTGCCAAGACACCCACACTACTTTGGTGAT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTTCATCCATATCACTaGCTGGATCCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLLHPYH*LDPEFS
Trigger: TGAAAATTCTGGATCCAGTCAGTGATATGGATGAAG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCGACAAGCTCAGTGACTaGGCCCCCATTACACAGCTC +
Preference number: 4 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSDKLSD*APITQL
Trigger: GAGCTGTGTAATGGGGGCTCAGTCACTGAGCTTGTC...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGGCAGACGTGTACTGGTaGGTTGAGCTGAAACACCAA +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLADVYW*VELKHQ
Trigger: TTGGTGTTTCAGCTCAACTCACCAGTACACGTCTGC...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTGCTGCTCACAGGCAATaGCCTCAGGGGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVAAHRQ*PQGPSR
Trigger: TCTGGATGGCCCCTGAGGTCATTGCCTGTGAGCAGC...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAATTGATGGCAGTGCATaGGTTCCCAAAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQIDGSA*VPKGFH
Trigger: GTGGAAGCCTTTGGGAACTCATGCACTGCCATCAAT...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGATCCTGAAGCAATGCTaGATTGCTTCGAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLILKQC*IASNCL
Trigger: AAGACAATTCGAAGCAATTCAGCATTGCTTCAGGAT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTGGCTTTCCCAGCACTaGAATGTGGAGGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLWLSQH*NVEAKN
Trigger: GTTCTTTGCCTCCACATTTCAGTGCTGGGAAAGCCA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGATGTACAGAGCCCCTaGGAACTTTATGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQDVQSP*ELYGHQ
Trigger: CTGGTGACCATAAAGTTCTCAGGGGCTCTGTACATC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGAGCAGGAGAGTTGCTTaGAGTCTGTGTACGGCCATT +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLSRRVA*SLCTAI
Trigger: AATGGCCGTACACAGACTTCAAGCAACTCTCCTGCT...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGCCCATTTTTCTCTGTaGCAGCAGGAGAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFAHFSL*QQESCL
Trigger: CAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGGC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAGAACTCCTGACTTCATaGTCCGCCCATCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRELLTS*SAHLGL
Trigger: GAGGCCAAGATGGGCGGATCATGAAGTCAGGAGTTC...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCCCACTGCTTTGGTTTaGAGTGTCCCCTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFPTALV*SVPCLI
Trigger: AATCAAGCAGGGGACACTTCAAACCAAAGCAGTGGG...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR GCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGTTACCTTGTAGACTTTaGCATAGGTGCCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGLPCRL*HRCLYQ
Trigger: TTGGTAAAGGCACCTATGGCAAAGTCTACAAGGTAA...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTTGGCCAGCTGTTTTTaGAGAAACAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGLASCF*RNRTFP
Trigger: TGGAAAAGTTCTGTTTCTGCAAAAACAGCTGGCCAA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGTTGAGAGGAAATAGCTaGGAACTCAATGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLLRGNS*ELNVPN
Trigger: ATTGGGAACATTGAGTTCGCAGCTATTTCCTCTCAA...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCAGGGTCTGGTCAGTTaGTTGGGGAAACCGACTTTC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLQGLVS*LGKPTF
Trigger: GAAAGTCGGTTTCCCCAAGCAACTGACCAGACCCTG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACTCTCTCGAGAGAACTaGAGGGCCTCTCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRLSREN*RASRSS
Trigger: TGATGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTCGGCGAGGTGTTCGATaGTTCTGTGCAAGACCATTT +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFRRGVR*FCARPF
Trigger: AAATGGTCTTGCACAGAAGCATCGAACACCTCGCCG...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCGGCGAGGTGTTCGATaGTTCTGTGCAAGACCATTT +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPRRGVR*FCARPF
Trigger: AAATGGTCTTGCACAGAAGCATCGAACACCTCGCCG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTACAGGGCTTTGGACATaGCGTCTCGAACGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSTGLWT*RLERPQ
Trigger: CTGCGGACGTTCGAGACGCCATGTCCAAAGCCCTGT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTATCCTAGCTCTTGTCTaGGCCAAATTACCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIILALV*AKLPVL
Trigger: CAAAACAGGTAATTTGGCCCAGACAAGAGCTAGGAT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTGTGGCCCACTGCTTTaGTTTGAAGTGTCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLCGPLL*FEVSPD
Trigger: GTCAGGGGACACTTCAAACCAAAGCAGTGGGCCACA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTCAATCCTTGCTGATCTaGAGCAGGATGGCATATCCG +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFQSLLI*SRMAYP
Trigger: CGGATATGCCATCCTGCTCCAGATCAGCAAGGATTG...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAGGCTACTCAGCATTTTaGGCTGCTGACATCGTCGGC +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRGYSAF*AADIVG
Trigger: GCCGACGATGTCAGCAGCCCAAAATGCTGAGTAGCC...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTCCCACAGGGCCCCATaGGATGAGAAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSSHRAP*DEKGRQ
Trigger: CTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCTTCATCCATATCACTaGCTGGATCCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWILHPYH*LDPEFS
Trigger: TGAAAATTCTGGATCCAGTCAGTGATATGGATGAAG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACGTGTACTGGTGAGTTaGGCTGAAACACCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQRVLVS*AETPKS
Trigger: TGACTTTGGTGTTTCAGCTCAACTCACCAGTACACG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACGCAGACGTGTACTGGTaGGTTGAGCTGAAACACCAA +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDADVYW*VELKHQ
Trigger: TTGGTGTTTCAGCTCAACTCACCAGTACACGTCTGC...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCGGTCAAGGAGATGTGTaGCGGAAGGTCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSGQGDV*RKVAFQ
Trigger: TTGAAAGGCGACCTTCCGTCACACATCTCCTTGACC...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCCAGAACCTCTAGGTTaGCCAAATCATCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLPEPLG*PNHPQG
Trigger: GCCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCAACCACTCTGCCTATaGCTTCTCGAAGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFQPLCL*LLEAAN
Trigger: ATTTGCTGCTTCGAGAAGTCATAGGCAGAGTGGTTG...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTTCTCTCTCTTCTCTCTaGCCCTTTTGTATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFSLSSL*PFCISW
Trigger: CCAGGAGATACAAAAGGGTCAGAGAGAAGAGAGAGA...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATCTCTCTCTTCTCTCTaGCCCTTTTGTATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQSLSSL*PFCISW
Trigger: CCAGGAGATACAAAAGGGTCAGAGAGAAGAGAGAGA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGTTGGATTCTGCTTGTaGATGGCTCCTACGATGTAC +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFVGFCL*MAPTMY
Trigger: GTACATCGTAGGAGCCATTCACAAGCAGAATCCAAC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGATGATTAGACTGGGGTaGGACTGGCTGTTATCTTCC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLMIRLG*DWLLSS
Trigger: GGAAGATAACAGCCAGTCTCACCCCAGTCTAATCAT...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGAAGAGTCATACTGCTaGTCACAGGCAATGACCTCA +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFEESYC*SQAMTS
Trigger: TGAGGTCATTGCCTGTGAGCAGCAGTATGACTCTTC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAAGTGTTTTCACAGGATaGATGTCAAAGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQSVFTG*MSKRGG
Trigger: CCCTCCCCTCTTTGACATGCATCCTGTGAAAACACT...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGATTCTTCAAAAAGGATaGGGTGGGAATAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLILQKG*GGNSPG
Trigger: GCCAGGGCTATTCCCACCGCATCCTTTTTGAAGAAT...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAGATTTAGGCCTATCTaGCTAAACACAGGCAATTAT +
Preference number: 4 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGRFRPI*LNTGNY
Trigger: ATAATTGCCTGTGTTTAGGCAGATAGGCCTAAATCT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCGCTTCATCCAACCGCTaGCCACATCTGAGTAGACCT +
Preference number: 4 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSASSNR*PHLSRP
Trigger: AGGTCTACTCAGATGTGGCCAGCGGTTGGATGAAGC...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCATCACAACTCCAGTTaGTGTAAACATCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIHHNSS*CKHHFQ
Trigger: CTGGAAATGATGTTTACACCAACTGGAGTTGTGATG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATTTGCCTCTTCATGTTaGTGGTTTCTTCCGGATGCC +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQFASSC*WFLPDA
Trigger: GGCATCCGGAAGAAACCACCAACATGAAGAGGCAAA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACCTGACTGGATGGCAATaGCTCCCTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDLTGWQ*LPSLSS
Trigger: AGAAGAGAGAGAAGGGAGCCATTGCCATCCAGTCAG...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTGTGTACGGCCATTGTTaGATTCTGCTTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPVYGHC*ILLVNG
Trigger: GCCATTCACAAGCAGAATCCAACAATGGCCGTACAC...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGGTGTACGGCCATTGTTaGATTCTGCTTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLVYGHC*ILLVNG
Trigger: GCCATTCACAAGCAGAATCCAACAATGGCCGTACAC...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGCCAATCCTCCAGGATaGGGCACTCAGCAATGGAGC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRANPPG*GTQQWS
Trigger: GCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGGC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTGCAGACGTGTACTGGTaGGTTGAGCTGAAACACCAA +
Preference number: 4 (lower is better)
Translates to: LKVTIPRVRLSINRSSAIADVYW*VELKHQ
Trigger: TTGGTGTTTCAGCTCAACTCACCAGTACACGTCTGC...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGAAGAAAGTCAAATGCTaGACAATCAGGTGGGCGCTT +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLKKVKC*TIRWAL
Trigger: AAGCGCCCACCTGATTGTTCAGCATTTGACTTTCTT...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTTCTCTCTCAAGGTCTaGTTATTGGCCTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFFSLKV*LLAFPK
Trigger: CTTGGGAAAGGCCAATAATCAGACCTTGAGAGAGAA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACTTCCACCAGGGAGTTaGCTTGTAGAATTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQLPPGS*LVEFSL
Trigger: GAGAGAAAATTCTACAAGTCAACTCCCTGGTGGAAG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTGGCTCGAGTTGTCATTaGTGGCAGTGCATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVGSSCH*WQCMSS
Trigger: GGAACTCATGCACTGCCATCAATGACAACTCGAGCC...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCAAAATTCTGTACACTaGGTGCACCTCTTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPQNSVH*VHLFVR
Trigger: ACGGACAAAGAGGTGCACTCAGTGTACAGAATTTTG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACAAAATTCTGTACACTaGGTGCACCTCTTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQQNSVH*VHLFVR
Trigger: ACGGACAAAGAGGTGCACTCAGTGTACAGAATTTTG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTGATTCACAATCCAGCTaGAGAGCCTCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSDSQSS*RASHTG
Trigger: CCCTGTATGGGAGGCTCTTCAGCTGGATTGTGAATC...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGAAGAAGCTTGTTTTCTaGCGTTCTCAGGACCACAAC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLKKLVF*RSQDHN
Trigger: GTTGTGGTCCTGAGAACGTCAGAAAACAAGCTTCTT...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCTAGCAAGAGGTGTTTaGTGTGCTGTGAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLLARGV*CAVNAK
Trigger: CTTGGCATTCACAGCACATCAAACACCTCTTGCTAG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTTTTCCCAGTACCCAGTaGTCTAATCTGGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFFPSTQ*SNLDFS
Trigger: GGAAAAGTCCAGATTAGATCACTGGGTACTGGGAAA...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACGTTGGATTCTGCTTGTaGATGGCTCCTACGATGTAC +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDVGFCL*MAPTMY
Trigger: GTACATCGTAGGAGCCATTCACAAGCAGAATCCAAC...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTAGAACTCTGGGCTTGTaGATGCCCATTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFRTLGL*MPIFLC
Trigger: ACAGAGAAAAATGGGCATTCACAAGCCCAGAGTTCT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGAGTTATTTGACCAGTaGATGGAGAGTTACAGAATA +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWIELFDQ*MESYRI
Trigger: TATTCTGTAACTCTCCATTCACTGGTCAAATAACTC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTCCATCCAGAACGGGGTaGCAACAGATGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSPSRTG*QQMCFS
Trigger: GGAGAAACACATCTGTTGGCACCCCGTTCTGGATGG...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCCCTTGGTATATGCCTaGAGCACAACCACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVPLVYA*STTTLP
Trigger: AGGCAGAGTGGTTGTGCTGCAGGCATATACCAAGGG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCCACCCCTTGGTATATaGCTGCAGCACAACCACTCT +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVPPLGI*LQHNHS
Trigger: AGAGTGGTTGTGCTGCAGGCATATACCAAGGGGTGG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTAACCGAGTGCTTGTTTaGATGTCCTGCGAAGATATC +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFNRVLV*MSCEDI
Trigger: GATATCTTCGCAGGACATGCAAACAAGCACTCGGTT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCATTCCTGTCAGATATaGTTGTGTAACTTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGHSCQI*LCNLVK
Trigger: CTTAACTAAGTTACACAAGCATATCTGACAGGAATG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTTTCCCAGGTGTCTGTaGGATCTGGAAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFFPRCL*DLEVIQ
Trigger: TTGAATCACTTCCAGATCCCACAGACACCTGGGAAA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTGCTTCATCCAACCGCTaGCCACATCTGAGTAGACCT +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSASSNR*PHLSRP
Trigger: AGGTCTACTCAGATGTGGCCAGCGGTTGGATGAAGC...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCATGATAAGGTCTTCTaGTATGCATCCTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLHDKVF*YASSHA
Trigger: GGCATGAGAGGATGCATACCAGAAGACCTTATCATG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTAGTCCCAGGGGTTTCTaGAGGAACATGTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSSPRGF*RNMSKS
Trigger: GCTCTTGGACATGTTCCTCCAGAAACCCCTGGGACT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTATGCAGCGCACAAAGTaGGGCTGTCCAACCACCATT +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVMQRTK*GCPTTI
Trigger: AATGGTGGTTGGACAGCCCCACTTTGTGCGCTGCAT...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACTGACTGGATGGCAATaGCTCCCTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRLTGWQ*LPSLSS
Trigger: AGAAGAGAGAGAAGGGAGCCATTGCCATCCAGTCAG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCCTTTTGGAGAACTCTaGGCTTGTGAATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLPFGEL*ACECPF
Trigger: AAATGGGCATTCACAAGCCCAGAGTTCTCCAAAAGG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGTTACATCCGTAATGTaGAAAGGCAGGCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFVTSVM*KGRLLR
Trigger: CCTCAAAAGCCTGCCTTTCCACATTACGGATGTAAC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317935.10
CDS-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTACTGGTTATAGTACATaGTGTCCTCAGGGCTACTCA +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFTGYST*CPQGYS
Trigger: TGAGTAGCCCTGAGGACACCATGTACTATAACCAGT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTCAAGTACTTTGATTTaGCCAAGTTTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWISSTLI*PSFLGF
Trigger: GAAGCCAAGAAAACTTGGCCAAATCAAAGTACTTGA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCAGGAAAGGAACTCCTaGGTCTCCACTGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVQERNS*VSTGAD
Trigger: ATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTG...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTCTGTTCTAGAGAAATaGTCTTATAGGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RVQERNSWVSTGADSEWISVLEK*SYRASL
Trigger: CAAAGAAGCCCTATAAGACCATTTCTCTAGAACAGA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTGTGGCCCACTGCTTTaGTTTGAAGTGTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSCGPLL*FEVSPA
Trigger: AGCAGGGGACACTTCAAACCAAAGCAGTGGGCCACA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTCTGAATCCGGCTTATaGGAGATTGGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFSESGL*EIGFSF
Trigger: GAATGAGAATCCAATCTCTCATAAGCCGGATTCAGA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTCACATCACGGTGGATaGTTCGGTTGTTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDSHHGG*FGCCAN
Trigger: ATTTGCACAACAACCGAATCATCCACCGTGATGTGA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTCACATCACGGTGGATaGTTCGGTTGTTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLSHHGG*FGCCAN
Trigger: ATTTGCACAACAACCGAATCATCCACCGTGATGTGA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAACTGGTGAGTTGAGCTaGAACACCAAAGTCAACGAG +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRTGELS*NTKVNE
Trigger: CTCGTTGACTTTGGTGTTTCAGCTCAACTCACCAGT...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACGTGTACTGGTGAGTTaGGCTGAAACACCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRRVLVS*AETPKS
Trigger: TGACTTTGGTGTTTCAGCTCAACTCACCAGTACACG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCCAGAACCTCTAGGTTaGCCAAATCATCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVPEPLG*PNHPQG
Trigger: GCCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTATTGATGGCAGTGCATaGGTTCCCAAAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSIDGSA*VPKGFH
Trigger: GTGGAAGCCTTTGGGAACTCATGCACTGCCATCAAT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACTAGCAAGAGGTGTTTaGTGTGCTGTGAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRLARGV*CAVNAK
Trigger: CTTGGCATTCACAGCACATCAAACACCTCTTGCTAG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTGACAGTCGATTACCATaGATGTTCCTACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLDSRLP*MFLLWT
Trigger: TGTCCAGAGTAGGAACATTCATGGTAATCGACTGTC...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGCTTTCTTACGCAATaGCAGACAGTCGATTACCAT +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQCFLTQ*QTVDYH
Trigger: ATGGTAATCGACTGTCTGTCATTGCGTAAGAAAGCA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTAGACTTTGCCATAGGTaGCTTTACCAATGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFRLCHR*LYQWSL
Trigger: TAGAGACCATTGGTAAAGGCACCTATGGCAAAGTCT...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTACTGTGGAGAGTATATaGTTAGATTCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFTVESI*LDSGRG
Trigger: ACCCCTTCCAGAATCTAAGCATATACTCTCCACAGT...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAATATTCAGAGATTCTTaGCCCCATCACAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQIFRDS*PHHNSS
Trigger: ACTGGAGTTGTGATGGGGGCAAGAATCTCTGAATAT...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACAGGGTCTGGTCAGTTaGTTGGGGAAACCGACTTTC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRQGLVS*LGKPTF
Trigger: GAAAGTCGGTTTCCCCAAGCAACTGACCAGACCCTG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACCACCCCTTGGTATATaGCTGCAGCACAACCACTCT +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRPPLGI*LQHNHS
Trigger: AGAGTGGTTGTGCTGCAGGCATATACCAAGGGGTGG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGGGAATGTGGCCCACTaGTTTGGTTTGAAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRGNVAH*FGLKCP
Trigger: GGGACACTTCAAACCAAAGCAGTGGGCCACATTCCC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACCTTGTTTGCATGTCCTaGGAAGATATCGCACCCTTT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDLVCMS*EDIAPF
Trigger: AAAGGGTGCGATATCTTCGCAGGACATGCAAACAAG...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTTCTTGGCTTCCTCTTaGTCCCTTGATATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLFLASS*SLDILE
Trigger: CTCTAGAATATCAAGGGAGCAAGAGGAAGCCAAGAA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGCACCCGGCTTTTCTTaGATACTATCTACCACATAT +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQAPGFS*ILSTTY
Trigger: ATATGTGGTAGATAGTATGCAAGAAAAGCCGGGTGC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTTTCCCAGGTGTCTGTaGGATCTGGAAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLFPRCL*DLEVIQ
Trigger: TTGAATCACTTCCAGATCCCACAGACACCTGGGAAA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCTTTAATAAATGGGTaGTCAAGGAGATGTGTGACG +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPPLING*SRRCVT
Trigger: CGTCACACATCTCCTTGACCACCCATTTATTAAAGG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTCCCATACAGGGCTTTaGACATGGCGTCTCGAACGT +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVSHTGL*TWRLER
Trigger: ACGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGATCCTAGCTCTTGTCTaGGCCAAATTACCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLILALV*AKLPVL
Trigger: CAAAACAGGTAATTTGGCCCAGACAAGAGCTAGGAT...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATTTGCCTCTTCATGTTaGTGGTTTCTTCCGGATGCC +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRFASSC*WFLPDA
Trigger: GGCATCCGGAAGAAACCACCAACATGAAGAGGCAAA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCTGACTGGATGGCAATaGCTCCCTTCTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVLTGWQ*LPSLSS
Trigger: AGAAGAGAGAGAAGGGAGCCATTGCCATCCAGTCAG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATTTGGAATCTGCAAGTaGTTCAGTAAGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQFGICK*FSKVQA
Trigger: TGCCTGAACCTTACTGAACCACTTGCAGATTCCAAA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGTAGTGTGGGTGTCTTaGCAAGGTGAAATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFVVWVS*QGEIKR
Trigger: TCTCTTTATTTCACCTTGCCAAGACACCCACACTAC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCCACTGATAGCCTCATaGAGTTATTTGACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLPLIAS*SYLTSE
Trigger: TTCACTGGTCAAATAACTCCATGAGGCTATCAGTGG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTCTGAATCCGGCTTATaGGAGATTGGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLSESGL*EIGFSF
Trigger: GAATGAGAATCCAATCTCTCATAAGCCGGATTCAGA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATGTGGGATCTGGAAGTaGTTCAAGTCCAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRCGIWK*FKSKHH
Trigger: ATGATGCTTGGACTTGAATCACTTCCAGATCCCACA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGCAGACGTGTACTGGTaGGTTGAGCTGAAACACCAA +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRADVYW*VELKHQ
Trigger: TTGGTGTTTCAGCTCAACTCACCAGTACACGTCTGC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTATTGATGGCAGTGCATaGGTTCCCAAAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVIDGSA*VPKGFH
Trigger: GTGGAAGCCTTTGGGAACTCATGCACTGCCATCAAT...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTGGCTTTCCCAGCACTaGAATGTGGAGGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVWLSQH*NVEAKN
Trigger: GTTCTTTGCCTCCACATTTCAGTGCTGGGAAAGCCA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGATGTACAGAGCCCCTaGGAACTTTATGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRDVQSP*ELYGHQ
Trigger: CTGGTGACCATAAAGTTCTCAGGGGCTCTGTACATC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTGTTGGATTCTGCTTGTaGATGGCTCCTACGATGTAC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSVGFCL*MAPTMY
Trigger: GTACATCGTAGGAGCCATTCACAAGCAGAATCCAAC...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTTTCCTCTTGCTCCCTTaGTATTCTAGAGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFFLLLP*YSRVPF
Trigger: AAATGGAACTCTAGAATATCAAGGGAGCAAGAGGAA...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGGATACAGTCCACTGGTaGCAGAGATTTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLDTVHW*QRFVIF
Trigger: GAATATTACAAATCTCTGTCACCAGTGGACTGTATC...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCAGCCCAAACTTGAGTaGAAAATCAGAGGTTATAGT +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLQPKLE*KIRGYS
Trigger: ACTATAACCTCTGATTTTTCACTCAAGTTTGGGCTG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTCATAGTCACAGCAACTaGATGCTCCCTGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: LKVTIPRVRLSINRSSAIHSHSN*MLPELH
Trigger: ATGAAGTTCAGGGAGCATTCAGTTGCTGTGACTATG...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAGACTTTGCCATAGGTaGCTTTACCAATGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLRLCHR*LYQWSL
Trigger: TAGAGACCATTGGTAAAGGCACCTATGGCAAAGTCT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCCATCCAGAACGGGGTaGCAACAGATGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISPSRTG*QQMCFS
Trigger: GGAGAAACACATCTGTTGGCACCCCGTTCTGGATGG...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTGAAGAGTCATACTGCTaGTCACAGGCAATGACCTCA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVEESYC*SQAMTS
Trigger: TGAGGTCATTGCCTGTGAGCAGCAGTATGACTCTTC...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTTGGCCAGCTGTTTTTaGAGAAACAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLLASCF*RNRTFP
Trigger: TGGAAAAGTTCTGTTTCTGCAAAAACAGCTGGCCAA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACATATTCAGAGATTCTTaGCCCCATCACAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDIFRDS*PHHNSS
Trigger: ACTGGAGTTGTGATGGGGGCAAGAATCTCTGAATAT...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTTGGAAGTTATGTCGTaGATCACCCTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDLEVMS*ITLPVS
Trigger: TGAAACTGGAAGGGTGATGCACGACATAACTTCCAA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTTGAGAGGAAATAGCTaGGAACTCAATGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLLRGNS*ELNVPN
Trigger: ATTGGGAACATTGAGTTCGCAGCTATTTCCTCTCAA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTATTCTTCAAAAAGGATaGGGTGGGAATAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSILQKG*GGNSPG
Trigger: GCCAGGGCTATTCCCACCGCATCCTTTTTGAAGAAT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACTCTGGGCTTGTGAATaGCCATTTTTCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRLWACE*PFFSVT
Trigger: TGTCACAGAGAAAAATGGGCATTCACAAGCCCAGAG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTTCTTGGCTTCCTCTTaGTCCCTTGATATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDFLASS*SLDILE
Trigger: CTCTAGAATATCAAGGGAGCAAGAGGAAGCCAAGAA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACCCTTCACATCACGGTaGATGATTCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRPFTSR*MIRLLC
Trigger: GCACAACAACCGAATCATCCACCGTGATGTGAAGGG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACCCTTTAATAAATGGGTaGTCAAGGAGATGTGTGACG +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDPLING*SRRCVT
Trigger: CGTCACACATCTCCTTGACCACCCATTTATTAAAGG...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACATCACAACTCCAGTTaGTGTAAACATCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQHHNSS*CKHHFQ
Trigger: CTGGAAATGATGTTTACACCAACTGGAGTTGTGATG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTTCTGTAAGACTCCTTaGAAGTTATGTCGTGCATCA +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFFCKTP*KLCRAS
Trigger: TGATGCACGACATAACTTCCAAGGAGTCTTACAGAA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACACTGGATTTGCTCATTaGCGATGTTTATGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDTGFAH*RCLCRA
Trigger: AGCTCTGCATAAACATCGCCAATGAGCAAATCCAGT...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAAATTACCTGTTTTaGTCAGAGGGATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPPNYLF*SEGLRR
Trigger: TCTTCTCAATCCCTCTGACCAAAACAGGTAATTTGG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACCAAATTACCTGTTTTaGTCAGAGGGATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQPNYLF*SEGLRR
Trigger: TCTTCTCAATCCCTCTGACCAAAACAGGTAATTTGG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAGTAAGGTTCAGGCATaGACCATATGTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLSKVQA*TICPKK
Trigger: CTTCTTTGGACATATGGTCCATGCCTGAACCTTACT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACAGTAAGGTTCAGGCATaGACCATATGTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDSKVQA*TICPKK
Trigger: CTTCTTTGGACATATGGTCCATGCCTGAACCTTACT...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTGTTCTAGGAGATCTTaGGGCCAATCCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVCSRRS*GQSSRM
Trigger: CATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTGTAGTGTGGGTGTCTTaGCAAGGTGAAATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLVVWVS*QGEIKR
Trigger: TCTCTTTATTTCACCTTGCCAAGACACCCACACTAC...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATCTGAATCCGGCTTATaGGAGATTGGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRSESGL*EIGFSF
Trigger: GAATGAGAATCCAATCTCTCATAAGCCGGATTCAGA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTTTACAACATTGGGATaGTTAGGAAGGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLFTTLG*LGRNCK
Trigger: TTTGCAGTTCCTTCCTAATCATCCCAATGTTGTAAA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTTTACAACATTGGGATaGTTAGGAAGGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFFTTLG*LGRNCK
Trigger: TTTGCAGTTCCTTCCTAATCATCCCAATGTTGTAAA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATTAGCAACAGGATTTTaGTGCTTCTGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRLATGF*CFWSWR
Trigger: TCTCCAAGACCAGAAGCATCAAAATCCTGTTGCTAA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTCTTCCACCAGGGAGTTaGCTTGTAGAATTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSLPPGS*LVEFSL
Trigger: GAGAGAAAATTCTACAAGTCAACTCCCTGGTGGAAG...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGATTTGGTCAGAGGGATTaGGAAGAGCTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRFGQRD*EELLKK
Trigger: CTTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAA...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTTCCTCTTGCTCCCTTaGTATTCTAGAGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDFLLLP*YSRVPF
Trigger: AAATGGAACTCTAGAATATCAAGGGAGCAAGAGGAA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATGCTTTCTTACGCAATaGCAGACAGTCGATTACCAT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRCFLTQ*QTVDYH
Trigger: ATGGTAATCGACTGTCTGTCATTGCGTAAGAAAGCA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGAGTTATTTGACCAGTaGATGGAGAGTTACAGAATA +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQELFDQ*MESYRI
Trigger: TATTCTGTAACTCTCCATTCACTGGTCAAATAACTC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCAGCCCAAACTTGAGTaGAAAATCAGAGGTTATAGT +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLQPKLE*KIRGYS
Trigger: ACTATAACCTCTGATTTTTCACTCAAGTTTGGGCTG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTTGGCCAGCTGTTTTTaGAGAAACAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLLASCF*RNRTFP
Trigger: TGGAAAAGTTCTGTTTCTGCAAAAACAGCTGGCCAA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATTGGAAGTTATGTCGTaGATCACCCTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRLEVMS*ITLPVS
Trigger: TGAAACTGGAAGGGTGATGCACGACATAACTTCCAA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTGAAGCAATGCTGAATTaGTTCGAATTGTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPEAMLN*FELSSV
Trigger: TACAGAAGACAATTCGAAGCAATTCAGCATTGCTTC...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTAAGAGGTGTTTGATGTaGTGTGAATGCCAAGTAATA +
Preference number: 4 (lower is better)
Translates to: WTRSGPSTVATDSLMELFKRCLM*CECQVI
Trigger: TATTACTTGGCATTCACAGCACATCAAACACCTCTT...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTCTCTGGGCTTGTGAATaGCCATTTTTCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSLWACE*PFFSVT
Trigger: TGTCACAGAGAAAAATGGGCATTCACAAGCCCAGAG...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAAGATGTTTTGGAATCTaGAAGTGGTTCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQRCFGI*KWFSKV
Trigger: AACCTTACTGAACCACTTGCAGATTCCAAAACATCT...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTAGATTTAGGCCTATCTaGCTAAACACAGGCAATTAT +
Preference number: 4 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPRFRPI*LNTGNY
Trigger: ATAATTGCCTGTGTTTAGGCAGATAGGCCTAAATCT...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTTTAGAATTACATTGTaGACGGACAAGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: HMSKEADPISVLSYAMTDFRITL*TDKQGV
Trigger: AACTCCCTGCTTGTCCGTGCACAATGTAATTCTAAA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR CCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACCTTTAATAAATGGGTaGTCAAGGAGATGTGTGACG +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRPLING*SRRCVT
Trigger: CGTCACACATCTCCTTGACCACCCATTTATTAAAGG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCCCGTACAAGATGTATaGGATCATTGCTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVPVQDV*DHCFIQ
Trigger: TTGGATGAAGCAATGATCTCATACATCTTGTACGGG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTACTGGTGAGTTGAGCTaGAACACCAAAGTCAACGAG +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISTGELS*NTKVNE
Trigger: CTCGTTGACTTTGGTGTTTCAGCTCAACTCACCAGT...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCGTGTACTGGTGAGTTaGGCTGAAACACCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISRVLVS*AETPKS
Trigger: TGACTTTGGTGTTTCAGCTCAACTCACCAGTACACG...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp CACTTTGTATTACACTTTAGTGATTTAGACATTGAAGGTAACAATCCCCAGAGTCCAGAACCTCTAGGTTaGCCAAATCATCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: HFVLHFSDLDIEGNNPQSPEPLG*PNHPQG
Trigger: GCCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGG...ACTCTGGGGATTGTTACCTTCAATGTCTAAATCACTAAAGTGTAATACAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGATTTCCCAGTACCCAGTaGTCTAATCTGGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRFPSTQ*SNLDFS
Trigger: GGAAAAGTCCAGATTAGATCACTGGGTACTGGGAAA...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATTCCTCTTGCTCCCTTaGTATTCTAGAGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRFLLLP*YSRVPF
Trigger: AAATGGAACTCTAGAATATCAAGGGAGCAAGAGGAA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACAGCCCAAACTTGAGTaGAAAATCAGAGGTTATAGT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRQPKLE*KIRGYS
Trigger: ACTATAACCTCTGATTTTTCACTCAAGTTTGGGCTG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAACTGAATGCTCCCTaGACTTCATCCCATAGCTAC +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISQLNAP*TSSHSY
Trigger: GTAGCTATGGGATGAAGTTCAGGGAGCATTCAGTTG...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTAGACTTTGCCATAGGTaGCTTTACCAATGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVRLCHR*LYQWSL
Trigger: TAGAGACCATTGGTAAAGGCACCTATGGCAAAGTCT...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTACTGTGGAGAGTATATaGTTAGATTCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSTVESI*LDSGRG
Trigger: ACCCCTTCCAGAATCTAAGCATATACTCTCCACAGT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTATTTTTCTCTCTCGCTaGCTGTTTTATAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLIFLSR*LFYNSG
Trigger: TCCAGAGTTATAAAACAGGCAGCGAGAGAGAAAAAT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAAGAGGTGTTTGATGTaGTGTGAATGCCAAGTAATA +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLKRCLM*CECQVI
Trigger: TATTACTTGGCATTCACAGCACATCAAACACCTCTT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAAACCGAGTGCTTGTTTaGATGTCCTGCGAAGATATC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRNRVLV*MSCEDI
Trigger: GATATCTTCGCAGGACATGCAAACAAGCACTCGGTT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTTTCTTGGCTTCCTCTTaGTCCCTTGATATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVFLASS*SLDILE
Trigger: CTCTAGAATATCAAGGGAGCAAGAGGAAGCCAAGAA...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAAGGTATGCACCACCATaGTGGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRRYAPP*WANFCI
Trigger: AATACAAAAATTAGCCCAGCATGGTGGTGCATACCT...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR CCA 90 bp CACTTTGTATTACACTTTAGTGATTTAGACATTGAAGGTAACAATCCCCAGAGTCCCTTCACATCACGGTaGATGATTCGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HFVLHFSDLDIEGNNPQSPFTSR*MIRLLC
Trigger: GCACAACAACCGAATCATCCACCGTGATGTGAAGGG...ACTCTGGGGATTGTTACCTTCAATGTCTAAATCACTAAAGTGTAATACAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTACTGGATTTGCTCATTaGCGATGTTTATGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVTGFAH*RCLCRA
Trigger: AGCTCTGCATAAACATCGCCAATGAGCAAATCCAGT...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAATCACCAAAGTAGTGTaGGTGTCTTGGCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRITKVV*VSWQGE
Trigger: TTCACCTTGCCAAGACACCCACACTACTTTGGTGAT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTCTTCATCCATATCACTaGCTGGATCCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSLHPYH*LDPEFS
Trigger: TGAAAATTCTGGATCCAGTCAGTGATATGGATGAAG...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTTTTACAACATTGGGATaGTTAGGAAGGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: LKVTIPRVRLSINRSSAIFTTLG*LGRNCK
Trigger: TTTGCAGTTCCTTCCTAATCATCCCAATGTTGTAAA...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTTCACATCACGGTGGATaGTTCGGTTGTTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISSHHGG*FGCCAN
Trigger: ATTTGCACAACAACCGAATCATCCACCGTGATGTGA...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAAGTTACAGAATAAAGTaGCCTGGACTTTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRSYRIK*PGLSLS
Trigger: TGACAGGGAAAGTCCAGGTCACTTTATTCTGTAACT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CACTTTGTATTACACTTTAGTGATTTAGACATTGAAGGTAACAATCCCCAGAGTGAAGAGTCATACTGCTaGTCACAGGCAATGACCTCA +
Preference number: 4 (lower is better)
Translates to: HFVLHFSDLDIEGNNPQSEESYC*SQAMTS
Trigger: TGAGGTCATTGCCTGTGAGCAGCAGTATGACTCTTC...ACTCTGGGGATTGTTACCTTCAATGTCTAAATCACTAAAGTGTAATACAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTAAGTGTTTTCACAGGATaGATGTCAAAGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLSVFTG*MSKRGG
Trigger: CCCTCCCCTCTTTGACATGCATCCTGTGAAAACACT...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTACTGTGGAGAGTATATaGTTAGATTCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVTVESI*LDSGRG
Trigger: ACCCCTTCCAGAATCTAAGCATATACTCTCCACAGT...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAATTTTTCTCTCTCGCTaGCTGTTTTATAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRIFLSR*LFYNSG
Trigger: TCCAGAGTTATAAAACAGGCAGCGAGAGAGAAAAAT...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTATGTTTTCGTCTGGCTaGAGGAGTGTATTAATGCGA +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVMFSSG*RSVLMR
Trigger: TCGCATTAATACACTCCTGCAGCCAGACGAAAACAT...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTGCACCCGGCTTTTCTTaGATACTATCTACCACATAT +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVAPGFS*ILSTTY
Trigger: ATATGTGGTAGATAGTATGCAAGAAAAGCCGGGTGC...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTTTTCCCAGGTGTCTGTaGGATCTGGAAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISFPRCL*DLEVIQ
Trigger: TTGAATCACTTCCAGATCCCACAGACACCTGGGAAA...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAGGTGGAGGATTTCTTaGAATCTTAAAGAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLRWRIS*NLKECF
Trigger: AAAACACTCTTTAAGATTCCAAGAAATCCTCCACCT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGATACTCCTTTAATAAATaGGTGGTCAAGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRYSFNK*VVKEMC
Trigger: ACACATCTCCTTGACCACCCATTTATTAAAGGAGTA...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTTACTCCTTTAATAAATaGGTGGTCAAGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: LKVTIPRVRLSINRSSAIYSFNK*VVKEMC
Trigger: ACACATCTCCTTGACCACCCATTTATTAAAGGAGTA...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTAGGTCTTGGAGAACCTTaGCCAGCTGTTTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLGLGEP*PAVFAE
Trigger: TTCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACC...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCCAAATTACCTGTTTTaGTCAGAGGGATTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVPNYLF*SEGLRR
Trigger: TCTTCTCAATCCCTCTGACCAAAACAGGTAATTTGG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTTTGGAATCTGCAAGTaGTTCAGTAAGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVFGICK*FSKVQA
Trigger: TGCCTGAACCTTACTGAACCACTTGCAGATTCCAAA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCCACTGATAGCCTCATaGAGTTATTTGACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVPLIAS*SYLTSE
Trigger: TTCACTGGTCAAATAACTCCATGAGGCTATCAGTGG...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTTTTACAACATTGGGATaGTTAGGAAGGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVFTTLG*LGRNCK
Trigger: TTTGCAGTTCCTTCCTAATCATCCCAATGTTGTAAA...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCCCGTACAAGATGTATaGGATCATTGCTTCATCCAA +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISPVQDV*DHCFIQ
Trigger: TTGGATGAAGCAATGATCTCATACATCTTGTACGGG...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGATACAGTCCACTGGTaGCAGAGATTTGTAATATTC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRDTVHW*QRFVIF
Trigger: GAATATTACAAATCTCTGTCACCAGTGGACTGTATC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTGAGTTATTTGACCAGTaGATGGAGAGTTACAGAATA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVELFDQ*MESYRI
Trigger: TATTCTGTAACTCTCCATTCACTGGTCAAATAACTC...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTATTTTTCTCTCTCGCTaGCTGTTTTATAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVIFLSR*LFYNSG
Trigger: TCCAGAGTTATAAAACAGGCAGCGAGAGAGAAAAAT...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTGAAGCAATGCTGAATTaGTTCGAATTGTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSEAMLN*FELSSV
Trigger: TACAGAAGACAATTCGAAGCAATTCAGCATTGCTTC...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR GCA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTAGATTTAGGCCTATCTaGCTAAACACAGGCAATTAT +
Preference number: 4 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVRFRPI*LNTGNY
Trigger: ATAATTGCCTGTGTTTAGGCAGATAGGCCTAAATCT...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAATCCATATCACTGACTaGATCCAGAATTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRIHITD*IQNFHC
Trigger: GCAGTGAAAATTCTGGATCCAGTCAGTGATATGGAT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACACTGTGAAATAAAGTaGTTGAATTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRHCEIK*LNSSHH
Trigger: ATGGTGTGAAGAATTCAACCACTTTATTTCACAGTG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTACATGATAAGGTCTTCTaGTATGCATCCTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLHDKVF*YASSHA
Trigger: GGCATGAGAGGATGCATACCAGAAGACCTTATCATG...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTATGCACCACCATGCTaGGCTAATTTTTGTATTATC +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSYAPPC*ANFCII
Trigger: GATAATACAAAAATTAGCCCAGCATGGTGGTGCATA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR CCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTGACCTTAGGAGGACATaGTCTACAACAGAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISDLRRT*STTESS
Trigger: TGAACTTTCTGTTGTAGACCATGTCCTCCTAAGGTC...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp CACTTTGTATTACACTTTAGTGATTTAGACATTGAAGGTAACAATCCCCAGAGTTTAGCAACAGGATTTTaGTGCTTCTGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: HFVLHFSDLDIEGNNPQSLATGF*CFWSWR
Trigger: TCTCCAAGACCAGAAGCATCAAAATCCTGTTGCTAA...ACTCTGGGGATTGTTACCTTCAATGTCTAAATCACTAAAGTGTAATACAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR TCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAACAAGCAGGGAGTTATaGACATTTCCATTCAACAAT +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRTSREL*TFPFNN
Trigger: ATTGTTGAATGGAAATGTTCATAACTCCCTGCTTGT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS-3UTR GCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTAAGACTTTGCCATAGGTaGCTTTACCAATGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLRLCHR*LYQWSL
Trigger: TAGAGACCATTGGTAAAGGCACCTATGGCAAAGTCT...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTAGATGTTTTGGAATCTaGAAGTGGTTCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVRCFGI*KWFSKV
Trigger: AACCTTACTGAACCACTTGCAGATTCCAAAACATCT...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTCACTGTGAAATAAAGTaGTTGAATTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSHCEIK*LNSSHH
Trigger: ATGGTGTGAAGAATTCAACCACTTTATTTCACAGTG...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp CACTTTGTATTACACTTTAGTGATTTAGACATTGAAGGTAACAATCCCCAGAGTCCTTTAATAAATGGGTaGTCAAGGAGATGTGTGACG +
Preference number: 4 (lower is better)
Translates to: HFVLHFSDLDIEGNNPQSPLING*SRRCVT
Trigger: CGTCACACATCTCCTTGACCACCCATTTATTAAAGG...ACTCTGGGGATTGTTACCTTCAATGTCTAAATCACTAAAGTGTAATACAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CCA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTCAAGTACTTTGATTTaGCCAAGTTTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVSSTLI*PSFLGF
Trigger: GAAGCCAAGAAAACTTGGCCAAATCAAAGTACTTGA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGATCTGTTCTAGAGAAATaGTCTTATAGGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRSVLEK*SYRASL
Trigger: CAAAGAAGCCCTATAAGACCATTTCTCTAGAACAGA...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR TCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTACTTCATCCATATCACTaGCTGGATCCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLLHPYH*LDPEFS
Trigger: TGAAAATTCTGGATCCAGTCAGTGATATGGATGAAG...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTATTGGCCAGCTGTTTTTaGAGAAACAGAACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLLASCF*RNRTFP
Trigger: TGGAAAAGTTCTGTTTCTGCAAAAACAGCTGGCCAA...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR GCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACATTCCTGTCAGATATaGTTGTGTAACTTAGTTAAG +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRHSCQI*LCNLVK
Trigger: CTTAACTAAGTTACACAAGCATATCTGACAGGAATG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAAGGTGGAGGATTTCTTaGAATCTTAAAGAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRRWRIS*NLKECF
Trigger: AAAACACTCTTTAAGATTCCAAGAAATCCTCCACCT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp TTTAATAGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCACTGTGAAATAAAGTaGTTGAATTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: FNRLFLLIEHRQNGKLISHCEIK*LNSSHH
Trigger: ATGGTGTGAAGAATTCAACCACTTTATTTCACAGTG...AGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCTATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
3UTR CAA 72 bp ACATCTGTTCTAGAGAAATGGTCTTATAGGGCTTCTTaGTTTTTGATTACATCACACTGCAATTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: TSVLEKWSYRAS*FLITSHCNLSC
Trigger: ACATGACAAATTGCAGTGTGATGTAATCAAAAACAAAGAAGCCCTATAAGACCATTTCTCTAGAACAGATGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CCA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTAAGGTGGAGGATTTCTTaGAATCTTAAAGAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLRWRIS*NLKECF
Trigger: AAAACACTCTTTAAGATTCCAAGAAATCCTCCACCT...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS CCA 90 bp TGGCGGCGGATGCTGACTGTCTCCAGAATCCCTGTGGAGCGGAGCTaGGCCAGCACCCTCTCTCGAGAGAACTGCAGGGCCTCTCGGTCA +
Preference number: 5 (lower is better)
Translates to: WRRMLTVSRIPVERS*ASTLSRENCRASRS
Trigger: TGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAGGGTGCTGGCCCAGCTCCGCTCCACAGGGATTCTGGAGACAGTCAGCATCCGCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGAGGCTCGCTGCAGTCTaGAACCTCGGCACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVRLAAV*NLGTSP
Trigger: AGGGGAAGTGCCGAGGTTCAAGACTGCAGCGAGCCT...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATAGGCTCGCTGCAGTCTaGAACCTCGGCACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDRLAAV*NLGTSP
Trigger: AGGGGAAGTGCCGAGGTTCAAGACTGCAGCGAGCCT...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTCCAAGAGCGGGCGGTaGTCCTCATATTCCACGGGT +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDSKSGR*SSYSTG
Trigger: ACCCGTGGAATATGAGGACAACCGCCCGCTCTTGGA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS TCA 90 bp ATTCTTCAAAAAGGATGCGGTGGGAATAGCCCTGGCGGCGGATGCTaGCTGTCTCCAGAATCCCTGTGGAGCGGAGCTGGGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: ILQKGCGGNSPGGGC*LSPESLWSGAGPAP
Trigger: GGGTGCTGGCCCAGCTCCGCTCCACAGGGATTCTGGAGACAGTCAGCATCCGCCGCCAGGGCTATTCCCACCGCATCCTTTTTGAAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS GCA 90 bp ATCCCTGTGGAGCGGAGCTGGGCCAGCACCCTCTCTCGAGAGAACTaGAGGGCCTCTCGGTCATCATTGGGTTTAATGCAGCGCACAAAG +
Preference number: 5 (lower is better)
Translates to: IPVERSWASTLSREN*RASRSSLGLMQRTK
Trigger: CTTTGTGCGCTGCATTAAACCCAATGATGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAGGGTGCTGGCCCAGCTCCGCTCCACAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTTGATGCTTCTGGTCTaGGAGAACCTTGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDLMLLV*ENLGQL
Trigger: CAGCTGGCCAAGGTTCTCCAAGACCAGAAGCATCAA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCAGCAGGAGAGTTGCTaGAAGTCTGTGTACGGCCAT +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDQQESC*KSVYGH
Trigger: ATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACCAGCAGGAGAGTTGCTaGAAGTCTGTGTACGGCCAT +
Preference number: 5 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNQQESC*KSVYGH
Trigger: ATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTG...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTGGTCTTGGAGAACCTaGGCCAGCTGTTTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDWSWRT*ASCFCR
Trigger: TCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACCA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATCCAAAACGGCTCGAGTaGTCATTGATGGCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDPKRLE*SLMAVH
Trigger: ATGCACTGCCATCAATGACAACTCGAGCCGTTTTGG...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGTTTGCCTCTTCATGTaGGTGGTTTCTTCCGGATGC +
Preference number: 5 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNVCLFM*VVSSGC
Trigger: GCATCCGGAAGAAACCACCAACATGAAGAGGCAAAC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACTGTCCAACCACCATTTaGGAGAGCAGGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNCPTTI*ESRSIR
Trigger: TCTGATGGACCTGCTCTCCAAAATGGTGGTTGGACA...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGCCTCTCGGTCATCATaGGGTTTAATGCAGCGCACA +
Preference number: 5 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAASRSS*GLMQRT
Trigger: TGTGCGCTGCATTAAACCCAATGATGACCGAGAGGC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGCCCACTGCTTTGGTTaGAAGTGTCCCCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAAHCFG*KCPLLD
Trigger: ATCAAGCAGGGGACACTTCAAACCAAAGCAGTGGGC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS TCA 90 bp CTGTGGCTGCCTCCTTTTACCACAAGGTCACTGAGAACCTTGCAGTaGGAGTGTGCCTCTCAGGCACAGGCAGCTCCACAGCCAGATGCA +
Preference number: 5 (lower is better)
Translates to: LWLPPFTTRSLRTLQ*ECASQAQAAPQPDA
Trigger: TGCATCTGGCTGTGGAGCTGCCTGTGCCTGAGAGGCACACTCTCACTGCAAGGTTCTCAGTGACCTTGTGGTAAAAGGAGGCAGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGAGATGTATGAGATCATaGCTTCATCCAACCGCTGGC +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVRCMRS*LHPTAG
Trigger: GCCAGCGGTTGGATGAAGCAATGATCTCATACATCT...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGATATTCAGAGATTCTaGCCCCCATCACAACTCCAG +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVDIQRF*PPSQLQ
Trigger: CTGGAGTTGTGATGGGGGCAAGAATCTCTGAATATC...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCGTTTGCCTCTTCATGTaGGTGGTTTCTTCCGGATGC +
Preference number: 5 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAVCLFM*VVSSGC
Trigger: GCATCCGGAAGAAACCACCAACATGAAGAGGCAAAC...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCTGTCCAACCACCATTTaGGAGAGCAGGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSACPTTI*ESRSIR
Trigger: TCTGATGGACCTGCTCTCCAAAATGGTGGTTGGACA...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGCTAGCAAGAGGTGTTaGATGTGCTGTGAATGCCAA +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVASKRC*MCCECQ
Trigger: TTGGCATTCACAGCACATCAAACACCTCTTGCTAGC...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATGTCTGTGTACGGCCATaGTTGGATTCTGCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDVCVRP*LDSACE
Trigger: TTCACAAGCAGAATCCAACAATGGCCGTACACAGAC...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGGTGTTCTCAGTGTCCCACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCATCTGAGTAGACCTTaGACAAGCTCAGTGACTGAG +
Preference number: 5 (lower is better)
Translates to: RCSQCPTGPHGMRKEGSAHLSRP*TSSVTE
Trigger: CTCAGTCACTGAGCTTGTCAAAGGTCTACTCAGATG...GGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGTGGGACACTGAGAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTCCCATACAGGGCTTaGGACATGGCGTCTCGAACG +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGLPYRA*DMASRT
Trigger: CGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGAG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGAGATATCGCACCCTTTaGGAGAACTCTGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVERYRTL*ENSGLV
Trigger: CACAAGCCCAGAGTTCTCCAAAAGGGTGCGATATCT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCGCCCACTGCTTTGGTTaGAAGTGTCCCCTGACTGGA +
Preference number: 5 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGAHCFG*KCPLTG
Trigger: TCCAGTCAGGGGACACTTCAAACCAAAGCAGTGGGC...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CAA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGTGTGTACGGCCATTGTaGGATTCTGCTTGTGAATGG +
Preference number: 5 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVECVRPL*DSACEW
Trigger: CCATTCACAAGCAGAATCCAACAATGGCCGTACACA...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGGTCTGTGTACGGCCATaGTTGGATTCTGCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEVCVRP*LDSACE
Trigger: TTCACAAGCAGAATCCAACAATGGCCGTACACAGAC...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCAAGAGAGGGGTTATTaGCCTTGTAGAAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVQERGY*PCRKNL
Trigger: CAGATTCTTTCTACAAGGCAAATAACCCCTCTCTTG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCGGCTCGAGTTGTCATaGATGGCAGTGCATGAGTTC +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGRLELS*MAVHEF
Trigger: GAACTCATGCACTGCCATCAATGACAACTCGAGCCG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGCTGAATTGCTTCGAATaGTCTTCTGTAAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVLNCFE*SSVRLL
Trigger: AAGGAGTCTTACAGAAGACAATTCGAAGCAATTCAG...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAATCCTCCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGTTTATCAGTCTGATGTaGAGAGGAAATAGCTGCGAA +
Preference number: 5 (lower is better)
Translates to: PILQDGALSNGALTLGEVFISLM*RGNSCE
Trigger: TTCGCAGCTATTTCCTCTCAACATCAGACTGATAAA...CACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGGAGGATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTTTATCAGTCTGATGTaGAGAGGAAATAGCTGCGAA +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDFISLM*RGNSCE
Trigger: TTCGCAGCTATTTCCTCTCAACATCAGACTGATAAA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CCAGGATGGGGCACTCAGCAATGGAGCCCTGACTCTGGGGGAGGTGGGAGTGATTCCCCATCAAGTACTTaGATTTGGCCAAGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PGWGTQQWSPDSGGGGSDSPSST*IWPSFL
Trigger: AAGAAAACTTGGCCAAATCAAAGTACTTGATGGGGA...ATCACTCCCACCTCCCCCAGAGTCAGGGCTCCATTGCTGAGTGCCCCATCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGAAGGGTGGGCTGAGTaGTTCTCCTCAGGGATACAG +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWIEGWAE*FSSGIQ
Trigger: CTGTATCCCTGAGGAGAACAACTCAGCCCACCCTTC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS CCA 90 bp AGGGCCCCGTACAAGATGTATGAGATCATTGCTTCATCCAACCGCTaGCCACATCTGAGTAGACCTTTGACAAGCTCAGTGACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: RAPYKMYEIIASSNR*PHLSRPLTSSVTEP
Trigger: GGGCTCAGTCACTGAGCTTGTCAAAGGTCTACTCAGATGTGGCCAGCGGTTGGATGAAGCAATGATCTCATACATCTTGTACGGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000442690.1
ENST00000484338.6
ENST00000602629.1
CDS-3UTR CAA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTGGTCTTGGAGAACCTaGGCCAGCTGTTTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGWSWRT*ASCFCR
Trigger: TCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACCA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCCAAAACGGCTCGAGTaGTCATTGATGGCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLPKRLE*SLMAVH
Trigger: ATGCACTGCCATCAATGACAACTCGAGCCGTTTTGG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGGCCCCATGGGATGAGAAAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACGAAATAGTACTGGATTaGCTCATTGGCGATGTTTAT +
Preference number: 5 (lower is better)
Translates to: TGPHGMRKEGSAQLRLHNEIVLD*LIGDVY
Trigger: ATAAACATCGCCAATGAGCAAATCCAGTACTATTTC...GTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTTTCTCATCCCATGGGGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTCCAGAGTGTCCACCTaGGCTTTCCCAGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWISRVST*AFPALK
Trigger: TTTCAGTGCTGGGAAAGCCAAGGTGGACACTCTGGA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGG +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWIVTAGE*LEVCVR
Trigger: CCGTACACAGACTTCAAGCAACTCTCCTGCTGTCAC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS TCA 90 bp AGAATTCATATTGACTGTGGCTGCCTCCTTTTACCACAAGGTCACTaGGAACCTTGCAGTGAGAGTGTGCCTCTCAGGCACAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RIHIDCGCLLLPQGH*EPCSESVPLRHRQL
Trigger: GAGCTGCCTGTGCCTGAGAGGCACACTCTCACTGCAAGGTTCTCAGTGACCTTGTGGTAAAAGGAGGCAGCCACAGTCAATATGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS CCA 90 bp GAGAATACCGGAAGTAAGAAGCCACAGTTTGCCTCTTCATGTTGGTaGTTTCTTCCGGATGCCGTATCACCTCCAGAGTGTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: ENTGSKKPQFASSCW*FLPDAVSPPECPPW
Trigger: CCAAGGTGGACACTCTGGAGGTGATACGGCATCCGGAAGAAACCACCAACATGAAGAGGCAAACTGTGGCTTCTTACTTCCGGTATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS-3UTR CAA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAGATGTATGAGATCATaGCTTCATCCAACCGCTGGC +
Preference number: 5 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGRCMRS*LHPTAG
Trigger: GCCAGCGGTTGGATGAAGCAATGATCTCATACATCT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTCCAGAACCTCTAGGTaGACCAAATCATCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGSRTSR*TKSSSR
Trigger: CCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGGA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTCCAAAACGGCTCGAGTaGTCATTGATGGCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWIPKRLE*SLMAVH
Trigger: ATGCACTGCCATCAATGACAACTCGAGCCGTTTTGG...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGATCAGAAAGCTTCTTTaGGTGATGAAGACCAGCATA +
Preference number: 5 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEIRKLL*VMKTSI
Trigger: TATGCTGGTCTTCATCACCAAAAGAAGCTTTCTGAT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGACTGAGTGCACCTCTTaGTCCGTGAACCCTATAATC +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGTECTS*SVNPII
Trigger: GATTATAGGGTTCACGGACAAAGAGGTGCACTCAGT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGAACAGAGGCAGCATTTaGCAAAGCTTCAGCATTGGG +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGNRGSI*QSFSIG
Trigger: CCCAATGCTGAAGCTTTGCAAAATGCTGCCTCTGTT...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAACAGAGGCAGCATTTaGCAAAGCTTCAGCATTGGG +
Preference number: 5 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGNRGSI*QSFSIG
Trigger: CCCAATGCTGAAGCTTTGCAAAATGCTGCCTCTGTT...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGCCCTGTCTACAGTGTaGGCACGGATGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFALSTV*ARMMVS
Trigger: CGAGACCATCATCCGTGCCAACACTGTAGACAGGGC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGCTCCAAGCCACCCCTaGGTATATGCCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFAPSHP*VYACST
Trigger: TGTGCTGCAGGCATATACCAAGGGGTGGCTTGGAGC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCGCACCCGGCTTTTCTaGCATACTATCTACCACATA +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGRTRLF*HTIYHI
Trigger: TATGTGGTAGATAGTATGCAAGAAAAGCCGGGTGCG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS CCA 90 bp TCAGAGAATACCGGAAGTAAGAAGCCACAGTTTGCCTCTTCATGTTaGTGGTTTCTTCCGGATGCCGTATCACCTCCAGAGTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: SENTGSKKPQFASSC*WFLPDAVSPPECPP
Trigger: AGGTGGACACTCTGGAGGTGATACGGCATCCGGAAGAAACCACCAACATGAAGAGGCAAACTGTGGCTTCTTACTTCCGGTATTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS CCA 90 bp TTAACTGGTTATAGTACATGGTGTCCTCAGGGCTACTCAGCATTTTaGGCTGCTGACATCGTCGGCGAGGTGTTCGATGCTTCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: LTGYSTWCPQGYSAF*AADIVGEVFDASVQ
Trigger: TTGCACAGAAGCATCGAACACCTCGCCGACGATGTCAGCAGCCCAAAATGCTGAGTAGCCCTGAGGACACCATGTACTATAACCAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCCGGCTTATGAGAGATaGGATTCTCATTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLPAYER*DSHSSK
Trigger: TTTGGAGGAATGAGAATCCAATCTCTCATAAGCCGG...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTCCAGAACCTCTAGGTaGACCAAATCATCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWISRTSR*TKSSSR
Trigger: CCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGGA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGCTTCCACCAGGGAGTaGACTTGTAGAATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLASTRE*TCRIFS
Trigger: AGAGAAAATTCTACAAGTCAACTCCCTGGTGGAAGC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTACTGAGTGCACCTCTTaGTCCGTGAACCCTATAATC +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWITECTS*SVNPII
Trigger: GATTATAGGGTTCACGGACAAAGAGGTGCACTCAGT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTAACAGAGGCAGCATTTaGCAAAGCTTCAGCATTGGG +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWINRGSI*QSFSIG
Trigger: CCCAATGCTGAAGCTTTGCAAAATGCTGCCTCTGTT...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACGCCCTGTCTACAGTGTaGGCACGGATGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: HMSKEADPISVLSYAMTDALSTV*ARMMVS
Trigger: CGAGACCATCATCCGTGCCAACACTGTAGACAGGGC...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCTCCCATACAGGGCTTaGGACATGGCGTCTCGAACG +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLLPYRA*DMASRT
Trigger: CGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGAG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGTACTGGATTTGCTCATaGGCGATGTTTATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGYWICS*AMFMQS
Trigger: GCTCTGCATAAACATCGCCAATGAGCAAATCCAGTA...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCTACTGGATTTGCTCATaGGCGATGTTTATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: TGNYPVLGDLGANPPGWGYWICS*AMFMQS
Trigger: GCTCTGCATAAACATCGCCAATGAGCAAATCCAGTA...GCCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTAGCAAGAGGTGTTaGATGTGCTGTGAATGCCAA +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWIASKRC*MCCECQ
Trigger: TTGGCATTCACAGCACATCAAACACCTCTTGCTAGC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGAAACCGAGTGCTTGTTaGCATGTCCTGCGAAGATAT +
Preference number: 5 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLKPSAC*HVLRRY
Trigger: ATATCTTCGCAGGACATGCAAACAAGCACTCGGTTT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AAGGAAGGCAGCGCCCAGCTCAGGCTGCACAACACATGTGGGAGAGTGGTAGAGATCAAGTACTTTGATTaGGCCAAGTTTTCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: KEGSAQLRLHNTCGRVVEIKYFD*AKFSWL
Trigger: AAGCCAAGAAAACTTGGCCAAATCAAAGTACTTGAT...CTCTACCACTCTCCCACATGTGTTGTGCAGCCTGAGCTGGGCGCTGCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGAAGGGTGGGCTGAGTaGTTCTCCTCAGGGATACAG +
Preference number: 5 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFEGWAE*FSSGIQ
Trigger: CTGTATCCCTGAGGAGAACAACTCAGCCCACCCTTC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS TCA 90 bp TGGAAAGTGGGAGCTGTTTTGGTCAGAGGGATTGAGAAGAGCTGCTaGAGAAGCTTGTTTTCTGACGTTCTCAGGACCACAACCACATCG +
Preference number: 5 (lower is better)
Translates to: WKVGAVLVRGIEKSC*RSLFSDVLRTTTTS
Trigger: CGATGTGGTTGTGGTCCTGAGAACGTCAGAAAACAAGCTTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAAACAGCTCCCACTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGCTTCCACCAGGGAGTaGACTTGTAGAATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWIASTRE*TCRIFS
Trigger: AGAGAAAATTCTACAAGTCAACTCCCTGGTGGAAGC...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTGCAAAGCTTCAGCATaGGGCACCTCACTTTTATCA +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWICKASA*GTSLLS
Trigger: TGATAAAAGTGAGGTGCCCAATGCTGAAGCTTTGCA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGGGCCTCCAGAAGTATTaGCATCGTAGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLGLQKY*HRRLSS
Trigger: TGAAGATAATCTACGATGCAAATACTTCTGGAGGCC...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATCCAGAGTGTCCACCTaGGCTTTCCCAGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQSRVST*AFPALK
Trigger: TTTCAGTGCTGGGAAAGCCAAGGTGGACACTCTGGA...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGCCTCTCGGTCATCATaGGGTTTAATGCAGCGCACA +
Preference number: 5 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFASRSS*GLMQRT
Trigger: TGTGCGCTGCATTAAACCCAATGATGACCGAGAGGC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACCAGAAACCGAGTGCTaGTTTGCATGTCCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQPETEC*FACPAK
Trigger: CTTCGCAGGACATGCAAACAAGCACTCGGTTTCTGG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCCAGAAACCGAGTGCTaGTTTGCATGTCCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLPETEC*FACPAK
Trigger: CTTCGCAGGACATGCAAACAAGCACTCGGTTTCTGG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAACCAGAGACTCAATCCTaGCTGATCTGGAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQPETQS*LIWSRM
Trigger: CATCCTGCTCCAGATCAGCAAGGATTGAGTCTCTGG...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTCCAGAGACTCAATCCTaGCTGATCTGGAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFPETQS*LIWSRM
Trigger: CATCCTGCTCCAGATCAGCAAGGATTGAGTCTCTGG...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGCAAGAGAGGGGTTATTaGCCTTGTAGAAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGQERGY*PCRKNL
Trigger: CAGATTCTTTCTACAAGGCAAATAACCCCTCTCTTG...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS TCA 90 bp TGGGCCAAATTACCTGTTTTGGTCAGAGGGATTGAGAAGAGCTGCTaGAGAAGCTTGTTTTCTGACGTTCTCAGGACCACAACCACATCG +
Preference number: 5 (lower is better)
Translates to: WAKLPVLVRGIEKSC*RSLFSDVLRTTTTS
Trigger: CGATGTGGTTGTGGTCCTGAGAACGTCAGAAAACAAGCTTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAAACAGGTAATTTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CCA 90 bp TTGCTTGAAGTCTGTGTACGGCCATTGTTGGATTCTGCTTGTGAATaGCTCCTACGATGTACAGAGCCCCTGAGAACTTTATGGTCACCA +
Preference number: 5 (lower is better)
Translates to: LLEVCVRPLLDSACE*LLRCTEPLRTLWSP
Trigger: TGGTGACCATAAAGTTCTCAGGGGCTCTGTACATCGTAGGAGCCATTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000602629.1
CDS-3UTR CAA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGTGGTCTTGGAGAACCTaGGCCAGCTGTTTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLWSWRT*ASCFCR
Trigger: TCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACCA...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTGATCAGAAAGCTTCTTTaGGTGATGAAGACCAGCATA +
Preference number: 5 (lower is better)
Translates to: ECRKGTPGSPLGQILNGLIRKLL*VMKTSI
Trigger: TATGCTGGTCTTCATCACCAAAAGAAGCTTTCTGAT...CAATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCTCCCATACAGGGCTTaGGACATGGCGTCTCGAACG +
Preference number: 5 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVLPYRA*DMASRT
Trigger: CGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGAG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTCCAGAGTGTCCACCTaGGCTTTCCCAGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: HMSKEADPISVLSYAMTDSRVST*AFPALK
Trigger: TTTCAGTGCTGGGAAAGCCAAGGTGGACACTCTGGA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTGCCTCTCGGTCATCATaGGGTTTAATGCAGCGCACA +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLASRSS*GLMQRT
Trigger: TGTGCGCTGCATTAAACCCAATGATGACCGAGAGGC...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTGCTCCAAGCCACCCCTaGGTATATGCCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSAPSHP*VYACST
Trigger: TGTGCTGCAGGCATATACCAAGGGGTGGCTTGGAGC...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCAGGATGGGGTCCCCATCAAGTACTTaGATTTGGCCAAGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: HRQLSCSRRSWGQSSRMGSPSST*IWPSFL
Trigger: AAGAAAACTTGGCCAAATCAAAGTACTTGATGGGGA...CCCCATCCTGGAGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTTTGATGCTTCTGGTCTaGGAGAACCTTGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LKVTIPRVRLSINRSSAILMLLV*ENLGQL
Trigger: CAGCTGGCCAAGGTTCTCCAAGACCAGAAGCATCAA...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTCCAGAACCTCTAGGTaGACCAAATCATCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFSRTSR*TKSSSR
Trigger: CCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGGA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTGATATTCAGAGATTCTaGCCCCCATCACAACTCCAG +
Preference number: 5 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFDIQRF*PPSQLQ
Trigger: CTGGAGTTGTGATGGGGGCAAGAATCTCTGAATATC...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTACTGAGTGCACCTCTTaGTCCGTGAACCCTATAATC +
Preference number: 5 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPTECTS*SVNPII
Trigger: GATTATAGGGTTCACGGACAAAGAGGTGCACTCAGT...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTGCCCTGTCTACAGTGTaGGCACGGATGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVALSTV*ARMMVS
Trigger: CGAGACCATCATCCGTGCCAACACTGTAGACAGGGC...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGATCCAAGAGCGGGCGGTaGTCCTCATATTCCACGGGT +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRSKSGR*SSYSTG
Trigger: ACCCGTGGAATATGAGGACAACCGCCCGCTCTTGGA...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTCCAAGAGCGGGCGGTaGTCCTCATATTCCACGGGT +
Preference number: 5 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVSKSGR*SSYSTG
Trigger: ACCCGTGGAATATGAGGACAACCGCCCGCTCTTGGA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGTAAGAAGCCACAGTTaGCCTCTTCATGTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFVRSHS*PLHVGG
Trigger: ACCACCAACATGAAGAGGCAAACTGTGGCTTCTTAC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGGTAAGAAGCCACAGTTaGCCTCTTCATGTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLVRSHS*PLHVGG
Trigger: ACCACCAACATGAAGAGGCAAACTGTGGCTTCTTAC...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTGTCCAACCACCATTTaGGAGAGCAGGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLCPTTI*ESRSIR
Trigger: TCTGATGGACCTGCTCTCCAAAATGGTGGTTGGACA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGCTAGCAAGAGGTGTTaGATGTGCTGTGAATGCCAA +
Preference number: 5 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQASKRC*MCCECQ
Trigger: TTGGCATTCACAGCACATCAAACACCTCTTGCTAGC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTGCCCACTGCTTTGGTTaGAAGTGTCCCCTGACTGGA +
Preference number: 5 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVAHCFG*KCPLTG
Trigger: TCCAGTCAGGGGACACTTCAAACCAAAGCAGTGGGC...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTGTGTACGGCCATTGTaGGATTCTGCTTGTGAATGG +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFCVRPL*DSACEW
Trigger: CCATTCACAAGCAGAATCCAACAATGGCCGTACACA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGACAGCAGGAGAGTTGCTaGAAGTCTGTGTACGGCCAT +
Preference number: 5 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRQQESC*KSVYGH
Trigger: ATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTG...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAGATATCGCACCCTTTaGGAGAACTCTGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLRYRTL*ENSGLV
Trigger: CACAAGCCCAGAGTTCTCCAAAAGGGTGCGATATCT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp AGAGTGCAGGAAAGGAACTCCTGGGTCTCCACTGGGGCAGATTCTGAATGGATTTCCCCATCAAGTACTTaGATTTGGCCAAGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: RVQERNSWVSTGADSEWISPSST*IWPSFL
Trigger: AAGAAAACTTGGCCAAATCAAAGTACTTGATGGGGA...AATCCATTCAGAATCTGCCCCAGTGGAGACCCAGGAGTTCCTTTCCTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTCGCACCCGGCTTTTCTaGCATACTATCTACCACATA +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFRTRLF*HTIYHI
Trigger: TATGTGGTAGATAGTATGCAAGAAAAGCCGGGTGCG...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTGCAAGTGGTTCAGTAAGGTTCAGGCATGGACCATATGTCCAAAGAAGCTGCCGGCTTATGAGAGATaGGATTCTCATTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ICKWFSKVQAWTICPKKLPAYER*DSHSSK
Trigger: TTTGGAGGAATGAGAATCCAATCTCTCATAAGCCGG...CAGCTTCTTTGGACATATGGTCCATGCCTGAACCTTACTGAACCACTTGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTCCGGCTTATGAGAGATaGGATTCTCATTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPPAYER*DSHSSK
Trigger: TTTGGAGGAATGAGAATCCAATCTCTCATAAGCCGG...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCATCTGAGTAGACCTTaGACAAGCTCAGTGACTGAG +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLHLSRP*TSSVTE
Trigger: CTCAGTCACTGAGCTTGTCAAAGGTCTACTCAGATG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTGAAGGTAACAATCCCCAGAGTTAGACTCAGCATAAACAGGTCCAGTGCAATTTGGTCTTGGAGAACCTaGGCCAGCTGTTTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LKVTIPRVRLSINRSSAIWSWRT*ASCFCR
Trigger: TCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACCA...AATTGCACTGGACCTGTTTATGCTGAGTCTAACTCTGGGGATTGTTACCTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTTGATGCTTCTGGTCTaGGAGAACCTTGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSLMLLV*ENLGQL
Trigger: CAGCTGGCCAAGGTTCTCCAAGACCAGAAGCATCAA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGCTTCCACCAGGGAGTaGACTTGTAGAATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFASTRE*TCRIFS
Trigger: AGAGAAAATTCTACAAGTCAACTCCCTGGTGGAAGC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTCGGCTCGAGTTGTCATaGATGGCAGTGCATGAGTTC +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSRLELS*MAVHEF
Trigger: GAACTCATGCACTGCCATCAATGACAACTCGAGCCG...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTTTTTGGTCAGAGGGATaGAGAAGAGCTGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFFWSEG*RRAAEE
Trigger: TTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAAA...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTAAACCGAGTGCTTGTTaGCATGTCCTGCGAAGATAT +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFKPSAC*HVLRRY
Trigger: ATATCTTCGCAGGACATGCAAACAAGCACTCGGTTT...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACCGCACCCGGCTTTTCTaGCATACTATCTACCACATA +
Preference number: 5 (lower is better)
Translates to: HMSKEADPISVLSYAMTDRTRLF*HTIYHI
Trigger: TATGTGGTAGATAGTATGCAAGAAAAGCCGGGTGCG...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTAGGTTTAGAATTACATaGTGCACGGACAAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFRFRIT*CTDKQG
Trigger: TCCCTGCTTGTCCGTGCACAATGTAATTCTAAACCT...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408978.9
CDS TCA 90 bp CAAGCCACCCCTTGGTATATGCCTGCAGCACAACCACTCTGCCTATaGCTTCTCGAAGCAGCAAATTTAATTGCTCAACATGGTAATATT +
Preference number: 5 (lower is better)
Translates to: QATPWYMPAAQPLCL*LLEAANLIAQHGNI
Trigger: AATATTACCATGTTGAGCAATTAAATTTGCTGCTTCGAGAAGTCATAGGCAGAGTGGTTGTGCTGCAGGCATATACCAAGGGGTGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS GCA 90 bp GGAAGTATTACAAAGAACATTTCATCATGTCTGAAGTGGCCCATCTaGAGGCAAAAGGCTGGCTGCATAAGCATGAGAAGAGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: GSITKNISSCLKWPI*RQKAGCISMRREQR
Trigger: TCTCTGTTCTCTTCTCATGCTTATGCAGCCAGCCTTTTGCCTGCAGATGGGCCACTTCAGACATGATGAAATGTTCTTTGTAATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS-3UTR CAA 90 bp AGGCTGTTCCTACTGATAGAGCACCGACAGAATGGTAAGTTAATTTCTCAAAGCAGATGTATGAGATCATaGCTTCATCCAACCGCTGGC +
Preference number: 5 (lower is better)
Translates to: RLFLLIEHRQNGKLISQSRCMRS*LHPTAG
Trigger: GCCAGCGGTTGGATGAAGCAATGATCTCATACATCT...GCTTTGAGAAATTAACTTACCATTCTGTCGGTGCTCTATCAGTAGGAACAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CAA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTTTGATGCTTCTGGTCTaGGAGAACCTTGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVLMLLV*ENLGQL
Trigger: CAGCTGGCCAAGGTTCTCCAAGACCAGAAGCATCAA...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACTGCAAAGCTTCAGCATaGGGCACCTCACTTTTATCA +
Preference number: 5 (lower is better)
Translates to: HMSKEADPISVLSYAMTDCKASA*GTSLLS
Trigger: TGATAAAAGTGAGGTGCCCAATGCTGAAGCTTTGCA...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GCATGGACCATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAAGGCCTCCAGAAGTATTaGCATCGTAGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: AWTICPKKLTPYQCFLTQGLQKY*HRRLSS
Trigger: TGAAGATAATCTACGATGCAAATACTTCTGGAGGCC...TTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATGGTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTTTTTGGTCAGAGGGATaGAGAAGAGCTGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLFWSEG*RRAAEE
Trigger: TTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAAA...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTCTTACGCAATGACAGACAGTCGATTACCATGAATGTTCCTACTCTGGACAGAGTAAGAAGCCACAGTTaGCCTCTTCATGTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: FLRNDRQSITMNVPTLDRVRSHS*PLHVGG
Trigger: ACCACCAACATGAAGAGGCAAACTGTGGCTTCTTAC...TCTGTCCAGAGTAGGAACATTCATGGTAATCGACTGTCTGTCATTGCGTAAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGG +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRVTAGE*LEVCVR
Trigger: CCGTACACAGACTTCAAGCAACTCTCCTGCTGTCAC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGG +
Preference number: 5 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVVTAGE*LEVCVR
Trigger: CCGTACACAGACTTCAAGCAACTCTCCTGCTGTCAC...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTAGATATCGCACCCTTTaGGAGAACTCTGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSRYRTL*ENSGLV
Trigger: CACAAGCCCAGAGTTCTCCAAAAGGGTGCGATATCT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CATATGTCCAAAGAAGCTGACCCCATATCAGTGCTTTCTTACGCAATGACAGACAAACCGAGTGCTTGTTaGCATGTCCTGCGAAGATAT +
Preference number: 5 (lower is better)
Translates to: HMSKEADPISVLSYAMTDKPSAC*HVLRRY
Trigger: ATATCTTCGCAGGACATGCAAACAAGCACTCGGTTT...GTCTGTCATTGCGTAAGAAAGCACTGATATGGGGTCAGCTTCTTTGGACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACCAGAAACCGAGTGCTaGTTTGCATGTCCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRPETEC*FACPAK
Trigger: CTTCGCAGGACATGCAAACAAGCACTCGGTTTCTGG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGACCAGAGACTCAATCCTaGCTGATCTGGAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRPETQS*LIWSRM
Trigger: CATCCTGCTCCAGATCAGCAAGGATTGAGTCTCTGG...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCATCTGAGTAGACCTTaGACAAGCTCAGTGACTGAG +
Preference number: 5 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVHLSRP*TSSVTE
Trigger: CTCAGTCACTGAGCTTGTCAAAGGTCTACTCAGATG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTGAATTGCTTCGAATaGTCTTCTGTAAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: WTFPVTKVTGPNFPSHSFLNCFE*SSVRLL
Trigger: AAGGAGTCTTACAGAAGACAATTCGAAGCAATTCAG...AAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTTGTGTACGGCCATTGTaGGATTCTGCTTGTGAATGG +
Preference number: 5 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVCVRPL*DSACEW
Trigger: CCATTCACAAGCAGAATCCAACAATGGCCGTACACA...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS CCA 90 bp CTATCAATAGGAAGTATTACAAAGAACATTTCATCATGTCTGAAGTaGCCCATCTGCAGGCAAAAGGCTGGCTGCATAAGCATGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LSIGSITKNISSCLK*PICRQKAGCISMRR
Trigger: TCTTCTCATGCTTATGCAGCCAGCCTTTTGCCTGCAGATGGGCCACTTCAGACATGATGAAATGTTCTTTGTAATACTTCCTATTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAAGATGTATGAGATCATaGCTTCATCCAACCGCTGGC +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRRCMRS*LHPTAG
Trigger: GCCAGCGGTTGGATGAAGCAATGATCTCATACATCT...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGATATTCAGAGATTCTaGCCCCCATCACAACTCCAG +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRDIQRF*PPSQLQ
Trigger: CTGGAGTTGTGATGGGGGCAAGAATCTCTGAATATC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTCTGAATTGCTTCGAATaGTCTTCTGTAAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLLNCFE*SSVRLL
Trigger: AAGGAGTCTTACAGAAGACAATTCGAAGCAATTCAG...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTGCAAAGCTTCAGCATaGGGCACCTCACTTTTATCA +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSCKASA*GTSLLS
Trigger: TGATAAAAGTGAGGTGCCCAATGCTGAAGCTTTGCA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTACTGGATTTGCTCATaGGCGATGTTTATGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSYWICS*AMFMQS
Trigger: GCTCTGCATAAACATCGCCAATGAGCAAATCCAGTA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTGCCTAAACACAGGCAATTATCCTGTTCTAGGAGATCTTGGGGCCAATCCTGAAATAGTACTGGATTaGCTCATTGGCGATGTTTAT +
Preference number: 5 (lower is better)
Translates to: ICLNTGNYPVLGDLGANPEIVLD*LIGDVY
Trigger: ATAAACATCGCCAATGAGCAAATCCAGTACTATTTC...AGGATTGGCCCCAAGATCTCCTAGAACAGGATAATTGCCTGTGTTTAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTGAAATAGTACTGGATTaGCTCATTGGCGATGTTTAT +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFEIVLD*LIGDVY
Trigger: ATAAACATCGCCAATGAGCAAATCCAGTACTATTTC...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TTTCTTTTCATCACCAAAGTAGTGTGGGTGTCTTGGCAAGGTGAAATAAAGAGAGTCTGTGTACGGCCATaGTTGGATTCTGCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: FLFITKVVWVSWQGEIKRVCVRP*LDSACE
Trigger: TTCACAAGCAGAATCCAACAATGGCCGTACACAGAC...TCTCTTTATTTCACCTTGCCAAGACACCCACACTACTTTGGTGATGAAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp TGGACAAGATCAGGTCCTTCCACTGTAGCCACTGATAGCCTCATGGAGTTATTTATCAAGTACTTTGATTaGGCCAAGTTTTCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: WTRSGPSTVATDSLMELFIKYFD*AKFSWL
Trigger: AAGCCAAGAAAACTTGGCCAAATCAAAGTACTTGAT...AAATAACTCCATGAGGCTATCAGTGGCTACAGTGGAAGGACCTGATCTTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS TCA 90 bp CCATACAGATGTTTCATCGATGACCTATTTTCTGAATCCGGCTTATaGGAGATTGGATTCTCATTCCTCCAAAAACCAGCAGAACACTTC +
Preference number: 5 (lower is better)
Translates to: PYRCFIDDLFSESGL*EIGFSFLQKPAEHF
Trigger: GAAGTGTTCTGCTGGTTTTTGGAGGAATGAGAATCCAATCTCTCATAAGCCGGATTCAGAAAATAGGTCATCGATGAAACATCTGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
CDS-3UTR CAA 90 bp ACTTTCCCTGTCACCAAAGTGACAGGTCCAAACTTTCCCTCTCATTCCTTTCTTAGGAACTGCAAAATGTaGTATTCTGCCTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: TFPVTKVTGPNFPSHSFLRNCKM*YSASIS
Trigger: AGAAATTGAGGCAGAATACAACATTTTGCAGTTCCT...AAGAAAGGAATGAGAGGGAAAGTTTGGACCTGTCACTTTGGTGACAGGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp GTGGTAGAGGATAGGATAAGATGTTTTGGAATCTGCAAGTGGTTCAGTAAGGTTCAAGAGAGGGGTTATTaGCCTTGTAGAAAGAATCTG +
Preference number: 5 (lower is better)
Translates to: VVEDRIRCFGICKWFSKVQERGY*PCRKNL
Trigger: CAGATTCTTTCTACAAGGCAAATAACCCCTCTCTTG...AACCTTACTGAACCACTTGCAGATTCCAAAACATCTTATCCTATCCTCTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CACTTTGTATTACACTTTAGTGATTTAGACATTGAAGGTAACAATCCCCAGAGTCATCTGAGTAGACCTTaGACAAGCTCAGTGACTGAG +
Preference number: 5 (lower is better)
Translates to: HFVLHFSDLDIEGNNPQSHLSRP*TSSVTE
Trigger: CTCAGTCACTGAGCTTGTCAAAGGTCTACTCAGATG...ACTCTGGGGATTGTTACCTTCAATGTCTAAATCACTAAAGTGTAATACAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CAA 90 bp GCACTGCACTTAAAACCTAGGTGGCATAAATACAGAATTAACCACTTTGTATTATCCAGAACCTCTAGGTaGACCAAATCATCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: ALHLKPRWHKYRINHFVLSRTSR*TKSSSR
Trigger: CCTTGAGGATGATTTGGTCAACCTAGAGGTTCTGGA...TAATACAAAGTGGTTAATTCTGTATTTATGCCACCTAGGTTTTAAGTGCAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442690.1
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTATCAGAAAGCTTCTTTaGGTGATGAAGACCAGCATA +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSIRKLL*VMKTSI
Trigger: TATGCTGGTCTTCATCACCAAAAGAAGCTTTCTGAT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTTTTATCAGTCTGATGTaGAGAGGAAATAGCTGCGAA +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSFISLM*RGNSCE
Trigger: TTCGCAGCTATTTCCTCTCAACATCAGACTGATAAA...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp ATCTTCCTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTGGCCTCCAGAAGTATTaGCATCGTAGATTATCTTCA +
Preference number: 5 (lower is better)
Translates to: IFLDTGGMNDCLNYCKGVGLQKY*HRRLSS
Trigger: TGAAGATAATCTACGATGCAAATACTTCTGGAGGCC...AACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS-3UTR CAA 90 bp CTAGACACTGGGGGCATGAATGACTGTTTAAACTATTGTAAAGGTGTTCTCAGTAGGAACTGCAAAATGTaGTATTCTGCCTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: LDTGGMNDCLNYCKGVLSRNCKM*YSASIS
Trigger: AGAAATTGAGGCAGAATACAACATTTTGCAGTTCCT...ACTGAGAACACCTTTACAATAGTTTAAACAGTCATTCATGCCCCCAGTGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
CDS TCA 90 bp TTGCATTATCCATTACCATTTCATTATCCATTAGAATGGAGCACCTaGGTTTACAACAGGGAACTCTTAGCAGATAATGCTCACCCATTT +
Preference number: 5 (lower is better)
Translates to: LHYPLPFHYPLEWST*VYNRELLADNAHPF
Trigger: AAATGGGTGAGCATTATCTGCTAAGAGTTCCCTGTTGTAAACTCAGGTGCTCCATTCTAATGGATAATGAAATGGTAATGGATAATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409940.6
CDS TCA 72 bp AAAGGATGCGGTGGGAATAGCCCTGGCGGCGGATGCTaGCTGTCTCCAGAATCCCTGTGGAGCGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: KGCGGNSPGGGC*LSPESLWSGAG
Trigger: CCCAGCTCCGCTCCACAGGGATTCTGGAGACAGTCAGCATCCGCCGCCAGGGCTATTCCCACCGCATCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS CCA 72 bp ATGCTGACTGTCTCCAGAATCCCTGTGGAGCGGAGCTaGGCCAGCACCCTCTCTCGAGAGAACTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: MLTVSRIPVERS*ASTLSRENCRA
Trigger: GGCCCTGCAGTTCTCTCGAGAGAGGGTGCTGGCCCAGCTCCGCTCCACAGGGATTCTGGAGACAGTCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS CAA 72 bp ATGGCGTCTCGAACGTCCGCAGCCCTGTCTACAGTGTaGGCACGGATGATGGTCTCGCCCCGGGTGACCACA +
Preference number: 6 (lower is better)
Translates to: MASRTSAALSTV*ARMMVSPRVTT
Trigger: TGTGGTCACCCGGGGCGAGACCATCATCCGTGCCAACACTGTAGACAGGGCTGCGGACGTTCGAGACGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS GCA 72 bp GCTGCAGTCTTGAACCTCGGCACTTCCCCTCGTACCTaGTGCGACGGGGGAATGTGGCCCACTGCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: AAVLNLGTSPRT*CDGGMWPTALV
Trigger: AACCAAAGCAGTGGGCCACATTCCCCCGTCGCAGCAGGTACGAGGGGAAGTGCCGAGGTTCAAGACTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000602629.1
CDS GCA 72 bp GAGCGGAGCTGGGCCAGCACCCTCTCTCGAGAGAACTaGAGGGCCTCTCGGTCATCATTGGGTTTAATGCAG +
Preference number: 6 (lower is better)
Translates to: ERSWASTLSREN*RASRSSLGLMQ
Trigger: CTGCATTAAACCCAATGATGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAGGGTGCTGGCCCAGCTCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS TCA 72 bp CTGAGAACTTTATGGTCACCAGGCTCGCTGCAGTCTTaGACCTCGGCACTTCCCCTCGTACCTGCTGCGACG +
Preference number: 6 (lower is better)
Translates to: LRTLWSPGSLQS*TSALPLVPAAT
Trigger: CGTCGCAGCAGGTACGAGGGGAAGTGCCGAGGTTCAAGACTGCAGCGAGCCTGGTGACCATAAAGTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000602629.1
CDS CCA 72 bp GTACCTGCTGCGACGGGGGAATGTGGCCCACTGCTTTaGTTTGAAGTGTCCCCTGACTGGATGGCAATGGCT +
Preference number: 6 (lower is better)
Translates to: VPAATGECGPLL*FEVSPDWMAMA
Trigger: AGCCATTGCCATCCAGTCAGGGGACACTTCAAACCAAAGCAGTGGGCCACATTCCCCCGTCGCAGCAGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317935.10
ENST00000409044.7
CDS CAA 90 bp GCCAGCACCCTCTCTCGAGAGAACTGCAGGGCCTCTCGGTCATCATaGGGTTTAATGCAGCGCACAAAGTGGGGCTGTCCAACCACCATT +
Preference number: 6 (lower is better)
Translates to: ASTLSRENCRASRSS*GLMQRTKWGCPTTI
Trigger: AATGGTGGTTGGACAGCCCCACTTTGTGCGCTGCATTAAACCCAATGATGACCGAGAGGCCCTGCAGTTCTCTCGAGAGAGGGTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS CAA 72 bp TTCACAATCCAGCTGAAGAGCCTCCCATACAGGGCTTaGGACATGGCGTCTCGAACGTCCGCAGCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: FTIQLKSLPYRA*DMASRTSAALS
Trigger: AGACAGGGCTGCGGACGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGAGGCTCTTCAGCTGGATTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS TCA 72 bp ATGGTGTCCTCAGGGCTACTCAGCATTTTGGGCTGCTaGCATCGTCGGCGAGGTGTTCGATGCTTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: MVSSGLLSILGC*HRRRGVRCFCA
Trigger: TGCACAGAAGCATCGAACACCTCGCCGACGATGTCAGCAGCCCAAAATGCTGAGTAGCCCTGAGGACACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS TCA 72 bp CCTCCTTTTACCACAAGGTCACTGAGAACCTTGCAGTaGGAGTGTGCCTCTCAGGCACAGGCAGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: PPFTTRSLRTLQ*ECASQAQAAPQ
Trigger: CTGTGGAGCTGCCTGTGCCTGAGAGGCACACTCTCACTGCAAGGTTCTCAGTGACCTTGTGGTAAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS GCA 72 bp TATCTCCTGGCTCCAAGCCACCCCTTGGTATATGCCTaGAGCACAACCACTCTGCCTATGACTTCTCGAAGC +
Preference number: 6 (lower is better)
Translates to: YLLAPSHPLVYA*STTTLPMTSRS
Trigger: GCTTCGAGAAGTCATAGGCAGAGTGGTTGTGCTGCAGGCATATACCAAGGGGTGGCTTGGAGCCAGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS CAA 72 bp AGGGGTTTCTGGAGGAACATGTCCAAGAGCGGGCGGTaGTCCTCATATTCCACGGGTACAGCATCAATGCCT +
Preference number: 6 (lower is better)
Translates to: RGFWRNMSKSGR*SSYSTGTASMP
Trigger: AGGCATTGATGCTGTACCCGTGGAATATGAGGACAACCGCCCGCTCTTGGACATGTTCCTCCAGAAACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CAA 90 bp TTAATGCGATTCACAATCCAGCTGAAGAGCCTCCCATACAGGGCTTaGGACATGGCGTCTCGAACGTCCGCAGCCCTGTCTACAGTGTTG +
Preference number: 6 (lower is better)
Translates to: LMRFTIQLKSLPYRA*DMASRTSAALSTVL
Trigger: CAACACTGTAGACAGGGCTGCGGACGTTCGAGACGCCATGTCCAAAGCCCTGTATGGGAGGCTCTTCAGCTGGATTGTGAATCGCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS TCA 72 bp ATTGACTGTGGCTGCCTCCTTTTACCACAAGGTCACTaGGAACCTTGCAGTGAGAGTGTGCCTCTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: IDCGCLLLPQGH*EPCSESVPLRH
Trigger: GTGCCTGAGAGGCACACTCTCACTGCAAGGTTCTCAGTGACCTTGTGGTAAAAGGAGGCAGCCACAGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS CCA 72 bp TTGAGGGGCTCCCCAGAGACTCAATCCTTGCTGATCTaGAGCAGGATGGCATATCCGAGAAGACAGCAAATC +
Preference number: 6 (lower is better)
Translates to: LRGSPETQSLLI*SRMAYPRRQQI
Trigger: GATTTGCTGTCTTCTCGGATATGCCATCCTGCTCCAGATCAGCAAGGATTGAGTCTCTGGGGAGCCCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000438642.6
ENST00000602629.1
CDS CCA 72 bp TATAGTACATGGTGTCCTCAGGGCTACTCAGCATTTTaGGCTGCTGACATCGTCGGCGAGGTGTTCGATGCT +
Preference number: 6 (lower is better)
Translates to: YSTWCPQGYSAF*AADIVGEVFDA
Trigger: AGCATCGAACACCTCGCCGACGATGTCAGCAGCCCAAAATGCTGAGTAGCCCTGAGGACACCATGTACTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS CAA 90 bp TCTGTGACAGCAGGAGAGTTGCTTGAAGTCTGTGTACGGCCATTGTaGGATTCTGCTTGTGAATGGCTCCTACGATGTACAGAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: SVTAGELLEVCVRPL*DSACEWLLRCTEPL
Trigger: CAGGGGCTCTGTACATCGTAGGAGCCATTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000602629.1
CDS TCA 72 bp GAGCTGAAACACCAAGAGGGCCCCGTACAAGATGTATaGGATCATTGCTTCATCCAACCGCTGGCCACATCT +
Preference number: 6 (lower is better)
Translates to: ELKHQEGPVQDV*DHCFIQPLATS
Trigger: AGATGTGGCCAGCGGTTGGATGAAGCAATGATCTCATACATCTTGTACGGGGCCCTCTTGGTGTTTCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602629.1
CDS GCA 72 bp ACAGTTTGCCTCTTCATGTTGGTGGTTTCTTCCGGATaGCGTATCACCTCCAGAGTGTCCACCTTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: TVCLFMLVVSSG*RITSRVSTLAF
Trigger: GAAAGCCAAGGTGGACACTCTGGAGGTGATACGGCATCCGGAAGAAACCACCAACATGAAGAGGCAAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS GCA 72 bp ATCAGTCCCAGAAACCGAGTGCTTGTTTGCATGTCCTaGGAAGATATCGCACCCTTTTGGAGAACTCTGGGC +
Preference number: 6 (lower is better)
Translates to: ISPRNRVLVCMS*EDIAPFWRTLG
Trigger: GCCCAGAGTTCTCCAAAAGGGTGCGATATCTTCGCAGGACATGCAAACAAGCACTCGGTTTCTGGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000438642.6
ENST00000602629.1
CDS CCA 72 bp ACCGGAAGTAAGAAGCCACAGTTTGCCTCTTCATGTTaGTGGTTTCTTCCGGATGCCGTATCACCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: TGSKKPQFASSC*WFLPDAVSPPE
Trigger: CTCTGGAGGTGATACGGCATCCGGAAGAAACCACCAACATGAAGAGGCAAACTGTGGCTTCTTACTTCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS CAA 90 bp TTCTCTGTGACAGCAGGAGAGTTGCTTGAAGTCTGTGTACGGCCATaGTTGGATTCTGCTTGTGAATGGCTCCTACGATGTACAGAGCCC +
Preference number: 6 (lower is better)
Translates to: FSVTAGELLEVCVRP*LDSACEWLLRCTEP
Trigger: GGGCTCTGTACATCGTAGGAGCCATTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGTCACAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000602629.1
CDS CAA 90 bp AAACCGAGTGCTTGTTTGCATGTCCTGCGAAGATATCGCACCCTTTaGGAGAACTCTGGGCTTGTGAATGCCTGTAATCCCAGCTACTCG +
Preference number: 6 (lower is better)
Translates to: KPSACLHVLRRYRTL*ENSGLVNACNPSYS
Trigger: CGAGTAGCTGGGATTACAGGCATTCACAAGCCCAGAGTTCTCCAAAAGGGTGCGATATCTTCGCAGGACATGCAAACAAGCACTCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438642.6
CDS TCA 72 bp CTTTGGTTTGAAGTGTCCCCTTGGCTTTCCCAGCACTaGAATGTGGAGGCAAAGAACTTGAGGCCACTGTTA +
Preference number: 6 (lower is better)
Translates to: LWFEVSPWLSQH*NVEAKNLRPLL
Trigger: TAACAGTGGCCTCAAGTTCTTTGCCTCCACATTTCAGTGCTGGGAAAGCCAAGGGGACACTTCAAACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602629.1
CDS CCA 72 bp TGTCCTGCGAAGATATCGCACCCTTTTGGAGAACTCTaGGCTTGTGAATGCCCATTTTTCTCTGTGACAGCA +
Preference number: 6 (lower is better)
Translates to: CPAKISHPFGEL*ACECPFFSVTA
Trigger: TGCTGTCACAGAGAAAAATGGGCATTCACAAGCCCAGAGTTCTCCAAAAGGGTGCGATATCTTCGCAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS CAA 72 bp ACAGCAGGAGAGTTGCTTGAAGTCTGTGTACGGCCATaGTTGGATTCTGCTTGTGAATGGCTCCTACGATGT +
Preference number: 6 (lower is better)
Translates to: TAGELLEVCVRP*LDSACEWLLRC
Trigger: ACATCGTAGGAGCCATTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000602629.1
CDS CAA 90 bp CTCTGGGCTTGTGAATGCCCATTTTTCTCTGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGGCCATTGTTGGATTCTGCTTGTGAA +
Preference number: 6 (lower is better)
Translates to: LWACECPFFSVTAGE*LEVCVRPLLDSACE
Trigger: TTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGGCATTCACAAGCCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS CCA 72 bp ATCATGTCTGAAGTGGCCCATCTGCAGGCAAAAGGCTaGCTGCATAAGCATGAGAAGAGAACAGAGAGAATT +
Preference number: 6 (lower is better)
Translates to: IMSEVAHLQAKG*LHKHEKRTERI
Trigger: AATTCTCTCTGTTCTCTTCTCATGCTTATGCAGCCAGCCTTTTGCCTGCAGATGGGCCACTTCAGACATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469359.1
CDS CAA 72 bp GCTTGTTTGCATGTCCTGCGAAGATATCGCACCCTTTaGGAGAACTCTGGGCTTGTGAATGCCCATTTTTCT +
Preference number: 6 (lower is better)
Translates to: ACLHVLRRYRTL*ENSGLVNAHFS
Trigger: AGAAAAATGGGCATTCACAAGCCCAGAGTTCTCCAAAAGGGTGCGATATCTTCGCAGGACATGCAAACAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS CCA 72 bp TACAAGATGTATGAGATCATTGCTTCATCCAACCGCTaGCCACATCTGAGTAGACCTTTGACAAGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: YKMYEIIASSNR*PHLSRPLTSSV
Trigger: CACTGAGCTTGTCAAAGGTCTACTCAGATGTGGCCAGCGGTTGGATGAAGCAATGATCTCATACATCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000442690.1
ENST00000484338.6
ENST00000602629.1
CDS CAA 72 bp TTGTCTGGGCCAAATTACCTGTTTTGGTCAGAGGGATaGAGAAGAGCTGCTGAAGAAGCTTGTTTTCTGACG +
Preference number: 6 (lower is better)
Translates to: LSGPNYLFWSEG*RRAAEEACFLT
Trigger: CGTCAGAAAACAAGCTTCTTCAGCAGCTCTTCTCAATCCCTCTGACCAAAACAGGTAATTTGGCCCAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CAA 90 bp GTCCGTGAACCCTATAATCCTGAAGCAATGCTGAATTGCTTCGAATaGTCTTCTGTAAGACTCCTTGGAAGTTATGTCGTGCATCACCCT +
Preference number: 6 (lower is better)
Translates to: VREPYNPEAMLNCFE*SSVRLLGSYVVHHP
Trigger: AGGGTGATGCACGACATAACTTCCAAGGAGTCTTACAGAAGACAATTCGAAGCAATTCAGCATTGCTTCAGGATTATAGGGTTCACGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CAA 90 bp TTAGCAGATAATGCTCACCCATTTTTCTCTGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGGCCATTGTTGGATTCTGCTTGTGAA +
Preference number: 6 (lower is better)
Translates to: LADNAHPFFSVTAGE*LEVCVRPLLDSACE
Trigger: TTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGGTGAGCATTATCTGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409940.6
CDS CAA 90 bp AACAGAGTGAAACTCCATCCATTTTTCTCTGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGGCCATTGTTGGATTCTGCTTGTGAA +
Preference number: 6 (lower is better)
Translates to: NRVKLHPFFSVTAGE*LEVCVRPLLDSACE
Trigger: TTCACAAGCAGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGATGGAGTTTCACTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438642.6
CDS TCA 72 bp CCTTGGTATATGCCTGCAGCACAACCACTCTGCCTATaGCTTCTCGAAGCAGCAAATTTAATTGCTCAACAT +
Preference number: 6 (lower is better)
Translates to: PWYMPAAQPLCL*LLEAANLIAQH
Trigger: ATGTTGAGCAATTAAATTTGCTGCTTCGAGAAGTCATAGGCAGAGTGGTTGTGCTGCAGGCATATACCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS GCA 72 bp AAGCATCATATAATACCTTTCCAGCATAATGCTGAATaGCAAAGCACAGTTCCACTCCTTTGGGCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: KHHIIPFQHNAE*QSTVPLLWASR
Trigger: TCTGGAGGCCCAAAGGAGTGGAACTGTGCTTTGGCATTCAGCATTATGCTGGAAAGGTATTATATGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CAA 72 bp AAACTCCATCCATTTTTCTCTGTGACAGCAGGAGAGTaGCTTGAAGTCTGTGTACGGCCATTGTTGGATTCT +
Preference number: 6 (lower is better)
Translates to: KLHPFFSVTAGE*LEVCVRPLLDS
Trigger: AGAATCCAACAATGGCCGTACACAGACTTCAAGCAACTCTCCTGCTGTCACAGAGAAAAATGGATGGAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438642.6
CDS CAA 90 bp GATGTTTCATCGATGACCTATTTTCTGAATCCGGCTTATGAGAGATaGGATTCTCATTCCTCCAAAAACCAGCAGAACACTTCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: DVSSMTYFLNPAYER*DSHSSKNQQNTSGP
Trigger: TGGGCCTGAAGTGTTCTGCTGGTTTTTGGAGGAATGAGAATCCAATCTCTCATAAGCCGGATTCAGAAAATAGGTCATCGATGAAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
CDS CCA 72 bp AACAGAACTTTTCCATGTACTCCTTTAATAAATGGGTaGTCAAGGAGATGTGTGACGGAAGGTCGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: NRTFPCTPLING*SRRCVTEGRLS
Trigger: TGAAAGGCGACCTTCCGTCACACATCTCCTTGACCACCCATTTATTAAAGGAGTACATGGAAAAGTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000442690.1
ENST00000484338.6
ENST00000602629.1
CDS CCA 72 bp GCTGAATTGCTTCGAATTGTCTTCTGTAAGACTCCTTaGAAGTTATGTCGTGCATCACCCTTCCAGTTTCAT +
Preference number: 6 (lower is better)
Translates to: AELLRIVFCKTP*KLCRASPFQFH
Trigger: ATGAAACTGGAAGGGTGATGCACGACATAACTTCCAAGGAGTCTTACAGAAGACAATTCGAAGCAATTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CCA 72 bp GATATTCTAGAGTTCCATTTAACTGGTTATAGTACATaGTGTCCTCAGGGCTACTCAGCATTTTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: DILEFHLTGYST*CPQGYSAFWAA
Trigger: AGCAGCCCAAAATGCTGAGTAGCCCTGAGGACACCATGTACTATAACCAGTTAAATGGAACTCTAGAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000602629.1
CDS CAA 90 bp CCTCCAAAAACCAGCAGAACACTTCAGGCCCAGAAAATGGTGTCTTaGATGACTAGAATGTATGACACATCATTACCAAAGGACTTTCGA +
Preference number: 6 (lower is better)
Translates to: PPKTSRTLQAQKMVS*MTRMYDTSLPKDFR
Trigger: TCGAAAGTCCTTTGGTAATGATGTGTCATACATTCTAGTCATCAAAGACACCATTTTCTGGGCCTGAAGTGTTCTGCTGGTTTTTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
CDS GCA 72 bp TGCTTCTGGTCTTGGAGAACCTTGGCCAGCTGTTTTTaGAGAAACAGAACTTTTCCATGTACTCCTTTAATA +
Preference number: 6 (lower is better)
Translates to: CFWSWRTLASCF*RNRTFPCTPLI
Trigger: TATTAAAGGAGTACATGGAAAAGTTCTGTTTCTGCAAAAACAGCTGGCCAAGGTTCTCCAAGACCAGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000442690.1
ENST00000484338.6
ENST00000602629.1
CDS CAA 72 bp ACCAGCAGAACACTTCAGGCCCAGAAAATGGTGTCTTaGATGACTAGAATGTATGACACATCATTACCAAAG +
Preference number: 6 (lower is better)
Translates to: TSRTLQAQKMVS*MTRMYDTSLPK
Trigger: CTTTGGTAATGATGTGTCATACATTCTAGTCATCAAAGACACCATTTTCTGGGCCTGAAGTGTTCTGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
CDS CAA 72 bp TCGATGACCTATTTTCTGAATCCGGCTTATGAGAGATaGGATTCTCATTCCTCCAAAAACCAGCAGAACACT +
Preference number: 6 (lower is better)
Translates to: SMTYFLNPAYER*DSHSSKNQQNT
Trigger: AGTGTTCTGCTGGTTTTTGGAGGAATGAGAATCCAATCTCTCATAAGCCGGATTCAGAAAATAGGTCATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
CDS CAA 90 bp TTGCAAAGCTTCAGCATTGGGCACCTCACTTTTATCAGTCTGATGTaGAGAGGAAATAGCTGCGAACTCAATGTTCCCAATATTCAAAAT +
Preference number: 6 (lower is better)
Translates to: LQSFSIGHLTFISLM*RGNSCELNVPNIQN
Trigger: ATTTTGAATATTGGGAACATTGAGTTCGCAGCTATTTCCTCTCAACATCAGACTGATAAAAGTGAGGTGCCCAATGCTGAAGCTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CAA 90 bp CTTTTCCAAGATAGCCACACAGCTCTCTTTGCTAGCAAGAGGTGTTaGATGTGCTGTGAATGCCAAGTAATAATACCTTTTCACAAATTC +
Preference number: 6 (lower is better)
Translates to: LFQDSHTALFASKRC*MCCECQVIIPFHKF
Trigger: GAATTTGTGAAAAGGTATTATTACTTGGCATTCACAGCACATCAAACACCTCTTGCTAGCAAAGAGAGCTGTGTGGCTATCTTGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
CDS TCA 72 bp GCGATGTTTATGCAGAGCTGCTCAAATGAATTTCTCTaGAAATTCTCGAATCCAAAGATATCCAAGATCCCC +
Preference number: 6 (lower is better)
Translates to: AMFMQSCSNEFL*KFSNPKISKIP
Trigger: GGGGATCTTGGATATCTTTGGATTCGAGAATTTTCAGAGAAATTCATTTGAGCAGCTCTGCATAAACATCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS CCA 72 bp AGTCTGGAAAACTGTGGAGAGTATATGCTTAGATTCTaGAAGGGGTTTAAGGCAATTAAGATGTCTCCAACA +
Preference number: 6 (lower is better)
Translates to: SLENCGEYMLRF*KGFKAIKMSPT
Trigger: TGTTGGAGACATCTTAATTGCCTTAAACCCCTTCCAGAATCTAAGCATATACTCTCCACAGTTTTCCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1
CDS TCA 72 bp GATATTCCATCTGCTCAAGAGCAAAAACATGCTGATTaGAATAGTACTGGATTTGCTCATTGGCGATGTTTA +
Preference number: 6 (lower is better)
Translates to: DIPSAQEQKHAD*NSTGFAHWRCL
Trigger: TAAACATCGCCAATGAGCAAATCCAGTACTATTTCAATCAGCATGTTTTTGCTCTTGAGCAGATGGAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317935.10
ENST00000408978.9
ENST00000409044.7
ENST00000409940.6
ENST00000438642.6
ENST00000484338.6
ENST00000602629.1