RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO1G (Homo sapiens)

Ensembl gene IDs: ENSG00000136286

Ensembl transcript IDs: ENST00000258787.12, ENST00000463516.5, ENST00000464434.1, ENST00000480503.5, ENST00000483585.5, ENST00000488554.5, ENST00000495831.5, ENST00000648014.1

Found 790 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGTGCGGCGGGTGCGGGCGCTCAGCGGCTGGGCCAGAGCAGGGTaGAGGAGCCGCGAGCGCAGCGGAAATCGGGCTCTGGCTGCTCCG +
Preference number: 1 (lower is better)
Translates to: GVRRVRALSGWARAG*RSRERSGNRALAAP
Trigger: CGGAGCAGCCAGAGCCCGATTTCCGCTGCGCTCGCGGCTCCTTCACCCTGCTCTGGCCCAGCCGCTGAGCGCCCGCACCCGCCGCACCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp CCCACCAGCTCCCCAACGCGGTTGTCCAATGGCGGCCGGGAGCGGTaGAGGCACACCACGAGGTCGTCCTGGCCGCGGGCGTGCAGCACC +
Preference number: 1 (lower is better)
Translates to: PTSSPTRLSNGGRER*RHTTRSSWPRACST
Trigger: GGTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGGCCGCCATTGGACAACCGCGTTGGGGAGCTGGTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTaGGGCGGGTGCGGGCGCTCAGCGGCTGGGCCAGAGCAGGGTGAA +
Preference number: 1 (lower is better)
Translates to: VYLQRWRGGQLAASG*GGCGRSAAGPEQGE
Trigger: TTCACCCTGCTCTGGCCCAGCCGCTGAGCGCCCGCACCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp CACACCACGAGGTCGTCCTGGCCGCGGGCGTGCAGCACCACCAGCTaGTCTCCTCCGCTGGTCACGCTCAGCCCCGTCACCGCCTCAAGG +
Preference number: 1 (lower is better)
Translates to: HTTRSSWPRACSTTS*SPPLVTLSPVTASR
Trigger: CCTTGAGGCGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCTGGTGGTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp GGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTGGCGGCTGCCTTaGAGCCTGGAATCGCCGCTGCAGCTCAGCCAGGTGAGCCCGCAC +
Preference number: 1 (lower is better)
Translates to: GQRPHKVTPVEWRLP*SLESPLQLSQVSPH
Trigger: GTGCGGGCTCACCTGGCTGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp GAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCTCAGCCACATaGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCCTCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: ERSTRSRGVAVSSAT*STSASSATARPSFC
Trigger: GCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 90 bp TGCTCCGGCCTGGGCTCCACGGAGATGAGGCGCCGGACCCCGCGATaGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGG +
Preference number: 1 (lower is better)
Translates to: CSGLGSTEMRRRTPR*LSGMQSETRTSRVR
Trigger: CCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAGGCCGGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp CAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCA +
Preference number: 1 (lower is better)
Translates to: QLCEPAGSGARGPGV*PSAQPHGPPVPPRP
Trigger: TGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 90 bp CAGCACAGCAGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTaGCGGCTGCCTTGCAGCCTGGAATCGCCGCTGCAGCTCAGCCAG +
Preference number: 1 (lower is better)
Translates to: QHSRGQRPHKVTPVE*RLPCSLESPLQLSQ
Trigger: CTGGCTGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp AACAGCTTGCTGTGGCCAAAGGCCACGTCCCCCTGCAGCCCGTGCTaGTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: NSLLWPKATSPCSPC*SRRALTAALSEPSR
Trigger: CCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp ATGAACAGCTTGCTGTGGCCAAAGGCCACGTCCCCCTGCAGCCCGTaGTGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: MNSLLWPKATSPCSP*CSRRALTAALSEPS
Trigger: GCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp GGTGAGCGGATGAACAGCTTGCTGTGGCCAAAGGCCACGTCCCCCTaGAGCCCGTGCTGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCG +
Preference number: 1 (lower is better)
Translates to: GERMNSLLWPKATSP*SPCCSRRALTAALS
Trigger: CGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 90 bp GATGAGGCGGGCTCGGCTCTGCTCCAGTGTGACCAGTGTCCGGGGTaGGCGGATGAACAGCTTGCTGTGGCCAAAGGCCACGTCCCCCTG +
Preference number: 1 (lower is better)
Translates to: DEAGSALLQCDQCPG*ADEQLAVAKGHVPL
Trigger: CAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTCACACTGGAGCAGAGCCGAGCCCGCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp CACGTCCCCCTGCAGCCCGTGCTGCTCCAGGAGAGCGCTCACGGCTaGCTTGTCGGAGCCCAGCAGGTGGTTGGGCCATGTGTATTCACA +
Preference number: 1 (lower is better)
Translates to: HVPLQPVLLQESAHG*LVGAQQVVGPCVFT
Trigger: TGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp TCCAGTGTGACCAGTGTCCGGGGTGAGCGGATGAACAGCTTGCTGTaGCCAAAGGCCACGTCCCCCTGCAGCCCGTGCTGCTCCAGGAGA +
Preference number: 1 (lower is better)
Translates to: SSVTSVRGERMNSLL*PKATSPCSPCCSRR
Trigger: TCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTCACACTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 90 bp CCCGGTACTGCCGGTCAGGGTCCAGCTTGTAGAGGTGCTGGTCTGTaGGCAGGAGGGCCCGGTTCCGGATCTTGTGGAAGCGGTTCACCT +
Preference number: 1 (lower is better)
Translates to: PGTAGQGPACRGAGL*AGGPGSGSCGSGSP
Trigger: AGGTGAACCGCTTCCACAAGATCCGGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCTACAAGCTGGACCCTGACCGGCAGTACCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp ACATGGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCCTCCTTCTaGAGCCCACCCTCCTCCGTCTCCACAAACTCGATGTTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: TWSTSASSATARPSF*SPPSSVSTNSMFPR
Trigger: CCTGGGAAACATCGAGTTTGTGGAGACGGAGGAGGGTGGGCTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR GCA 90 bp GTACACTGCCTTGGCACAGGCATCCCGGGCATAGCTGGCCTCAGCTaGAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAAC +
Preference number: 1 (lower is better)
Translates to: VHCLGTGIPGIAGLS*SVALLYEFPASRGN
Trigger: GTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGCCAGCTATGCCCGGGATGCCTGTGCCAAGGCAGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 90 bp GCCCTGCGGACCCTCACATTCTCCAGCAGCCCCAGGTATGCGACCTaGTGGCGACAGTGGTTCTCATCCAGCTTCCCAGCTACCTTGTCC +
Preference number: 1 (lower is better)
Translates to: ALRTLTFSSSPRYAT*WRQWFSSSFPATLS
Trigger: GGACAAGGTAGCTGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGAGAATGTGAGGGTCCGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp TGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTaGTTGGGCCATGTGTATTCACAGGTCATCTTGTACCTGAGCAGG +
Preference number: 1 (lower is better)
Translates to: CSRRALTAALSEPSR*LGHVYSQVILYLSR
Trigger: CCTGCTCAGGTACAAGATGACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp AAAGCCAGGGATGTGGGTGGGAGGGGGCCCTTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTT +
Preference number: 1 (lower is better)
Translates to: KARDVGGRGPLRDVP*IVLDPEVSAKLHGL
Trigger: AAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTCACGTAAGGGCCCCCTCCCACCCACATCCCTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR GCA 90 bp TTCTGCAATAGCAGCACAATGATGGGGATGAGGCGGGCTCGGCTCTaGTCCAGTGTGACCAGTGTCCGGGGTGAGCGGATGAACAGCTTG +
Preference number: 1 (lower is better)
Translates to: FCNSSTMMGMRRARL*SSVTSVRGERMNSL
Trigger: CAAGCTGTTCATCCGCTCACCCCGGACACTGGTCACACTGGAGCAGAGCCGAGCCCGCCTCATCCCCATCATTGTGCTGCTATTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 90 bp CTCAGTTCGCCACAACCTCTACCTCCCAGGTTCAAGCAGTTCTTGTaGCTCAGCCTCCCGAGCAACTGGCATTACAGGCACGCGTCATCG +
Preference number: 1 (lower is better)
Translates to: LSSPQPLPPRFKQFL*LSLPSNWHYRHASS
Trigger: CGATGACGCGTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTGAACCTGGGAGGTAGAGGTTGTGGCGAACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CCA 90 bp TCTTCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCATG +
Preference number: 1 (lower is better)
Translates to: SSGLKPMTLMASVTA*WLCSSLSKALCTVM
Trigger: CATGACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 90 bp CTCACATTCTCCAGCAGCCCCAGGTATGCGACCTGGTGGCGACAGTaGTTCTCATCCAGCTTCCCAGCTACCTTGTCCTCATTGGGCTTG +
Preference number: 1 (lower is better)
Translates to: LTFSSSPRYATWWRQ*FSSSFPATLSSLGL
Trigger: CAAGCCCAATGAGGACAAGGTAGCTGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGAGAATGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp ATCATGACAACCCCTGAAGACACCTGGGCTTTGGCACTGGGAGCGTaGTCCAAGTATGGTAGCGAGGCCTCACCTGGGAGCTTGTTAGAA +
Preference number: 1 (lower is better)
Translates to: IMTTPEDTWALALGA*SKYGSEASPGSLLE
Trigger: TTCTAACAAGCTCCCAGGTGAGGCCTCGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGTTGTCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CCA 90 bp CGTAGAGTGGGGTCCGTGCTGTTGTACAGCAGCCGCTTGAAGTCCTaGAAGAGGAAATCTCTGTTCTTGTCGATGAAGCCTTCCACGGAG +
Preference number: 1 (lower is better)
Translates to: RRVGSVLLYSSRLKS*KRKSLFLSMKPSTE
Trigger: CTCCGTGGAAGGCTTCATCGACAAGAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCTGCTGTACAACAGCACGGACCCCACTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTaGGCTTTGGCACTGGGAGCGTGGTCCAAGTATGGTAGCGAGGCC +
Preference number: 1 (lower is better)
Translates to: ATHKLIAIMTTPEDT*ALALGAWSKYGSEA
Trigger: GGCCTCGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR GCA 90 bp GCTCCCTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTaGAGTTCATGCAGCTGCTTGTCCTCACTGCCTCTCAGCAATTGG +
Preference number: 1 (lower is better)
Translates to: APWCVKLYTAGFLSK*SSCSCLSSLPLSNW
Trigger: CCAATTGCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 90 bp TCACTGTCCAAGGCACTGTGCACAGTCATGTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGT +
Preference number: 1 (lower is better)
Translates to: SLSKALCTVMLSPAP*CVKLYTAGFLSKCS
Trigger: ACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGCAGGACTCAACATGACTGTGCACAGTGCCTTGGACAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR TCA 90 bp ATGGTTAACCACTATCCTCAAACCCTGTTTCCTGCTCTTCACTTGTaGATCTGCTGTCCGGCATGTTTCAGTGTCTTAAAGGGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: MVNHYPQTLFPALHL*ICCPACFSVLKGWG
Trigger: CCCCCACCCCTTTAAGACACTGAAACATGCCGGACAGCAGATTCACAAGTGAAGAGCAGGAAACAGGGTTTGAGGATAGTGGTTAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR TCA 90 bp ATATTGGGCTGCTTTGTTGTCATCATCTATTCTATTCCCTCTCCTTaGGAAGTTCTCATGAAACACTTATACCTTGATGTGAGTCACCTT +
Preference number: 1 (lower is better)
Translates to: ILGCFVVIIYSIPSP*EVLMKHLYLDVSHL
Trigger: AAGGTGACTCACATCAAGGTATAAGTGTTTCATGAGAACTTCTCAAGGAGAGGGAATAGAATAGATGATGACAACAAAGCAGCCCAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CCA 90 bp CCGGGAGCGGTGCAGGCACACCACGAGGTCGTCCTGGCCGCGGGCGTGCAGCACGCTGGTACACTGCCTTaGCACAGGCATCCCGGGCAT +
Preference number: 2 (lower is better)
Translates to: PGAVQAHHEVVLAAGVQHAGTLP*HRHPGH
Trigger: ATGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGC...GTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CCA 90 bp CCGGGAGCGGTGCAGGCACACCACGAGGTCGTCCTGGCCGCGGGCGTGCAGCACGTTTATTTGCAGCGCTaGCGGGGCGGACAATTGGCG +
Preference number: 2 (lower is better)
Translates to: PGAVQAHHEVVLAAGVQHVYLQR*RGGQLA
Trigger: CGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC...GTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR TCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTAGAGGTGCTGGTCTGTaGGCAGGAGGGCCCGGTTCC +
Preference number: 2 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPRGAGL*AGGPGS
Trigger: GGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCT...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTGTGTCCTGGAAGGGCTaGAGCACAGCAGGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPVSWKG*STAGGS
Trigger: GCTGCCCCCTGCTGTGCTGCAGCCCTTCCAGGACAC...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR TCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTCAACGCTCTGCCAGGTaGTGCCCTCGCGCTCGTACT +
Preference number: 2 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPQRSAR*CPRART
Trigger: AGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTG...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CCA 90 bp GCTGCAGCACAGCAGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTGGCGGTCAGCTCAGCCACATaGTCCACCAGTGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: AAAQQGAAATQGHARRVAVSSAT*STSASS
Trigger: CGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGAC...CGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGTGCTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CAA 90 bp TCCCCCTGCAGCCCGTGCTGCTCCAGGAGAGCGCTCACGGCTGCCTaGTCGGAGCCCAGCAGGTGGTTGGGCCATGTGTATTCACAGGTC +
Preference number: 2 (lower is better)
Translates to: SPCSPCCSRRALTAA*SEPSRWLGHVYSQV
Trigger: GACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CAA 90 bp CTCTGCTCCAGTGTGACCAGTGTCCGGGGTGAGCGGATGAACAGCTaGCTGTGGCCAAAGGCCACGTCCCCCTGCAGCCCGTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LCSSVTSVRGERMNS*LWPKATSPCSPCCS
Trigger: GGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTCACACTGGAGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CCA 90 bp ACCCCGCGATGGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCATGGTCTTGTCTGTaGGGCAGAGCTGGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: TPRWLSGMQSETRTSRVRPWSCL*GRAGGW
Trigger: CCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGG...CCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATCGCGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTTGCCTCCTCGGCCACTaGCAGGCCCTCCTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVCLLGH*QALLLQ
Trigger: CTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCA...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp TGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTGGTTGGGCTCGGTCACTGCCTGGTaGCTCTGCTCATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: CSRRALTAALSEPSRWLGSVTAW*LCSSLS
Trigger: GGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA...GCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CCA 90 bp AAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGGCCAGGATGCCACGGTaGGGCCGCTCCACCAGATCC +
Preference number: 2 (lower is better)
Translates to: KSRPNSMVLSVGQSWRLVARMPR*GRSTRS
Trigger: GGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGC...CACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR TCA 90 bp GGGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGTGTGCACAGTCATGTTaGGTCCTGCTCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: GVWPSAQPHGPPVPPRPLCAQSC*VLLPGV
Trigger: CACACCAGGGAGCAGGACTCAACATGACTGTGCACA...CAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGGCAGCCAGGATGCGATaGACAGACTCCACCTCTTCA +
Preference number: 2 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWAARMR*TDSTSS
Trigger: TGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGC...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp CTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTGGCTCGGCCAAACTCCATaGTCTTGTCTGTGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LSGMQSETRTSRVRPSPWLGQTP*SCLWGR
Trigger: TCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAG...CCAGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp AGCCTCCGGCAGCGCCACCTCGCCAAGGTGCCCCGCCATGCCTTCTGCAATAGCATATGGCAGCCAGGATaGGATGCACAGACTCCACCT +
Preference number: 2 (lower is better)
Translates to: SLRQRHLAKVPRHAFCNSIWQPG*DAQTPP
Trigger: AGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATAT...GCTATTGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGCGCTGCCGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGCACATGGTCCACCAGTaGCTCCTCGGCCACTGCCAG +
Preference number: 2 (lower is better)
Translates to: SCSVALLYEFPASRGNCAHMVHQ*LLGHCQ
Trigger: CTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTG...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTCACATGGTCCACCAGTaGCTCCTCGGCCACTGCCAG +
Preference number: 2 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGHMVHQ*LLGHCQ
Trigger: CTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTG...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGTTTCTTTCACCCACGTaGTGCTTGAGGACCCGAGAC +
Preference number: 2 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWFLSPT*CLRTRD
Trigger: GTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAGAAA...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp CTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTGGGTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAA +
Preference number: 2 (lower is better)
Translates to: LSGMQSETRTSRVRPSPWVRDVP*IVLDPE
Trigger: TTCCGGATCAAGCACTATGCAGGGGACGTCACGTAC...CCAGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp CCGGTCAGGGTCCAGCTTGTAGAGGTGCTGGTCTGTGAGCAGGAGGGCCCGGTTCCACCTGCAGAAGAGTaGGTGGCAGGTGTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: PVRVQLVEVLVCEQEGPVPPAEE*VAGVLE
Trigger: TTCCAGGACACCTGCCACGCACTCTTCTGCAGGTGG...AACCGGGCCCTCCTGCTCACAGACCAGCACCTCTACAAGCTGGACCCTGACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CAA 90 bp TTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTaGATCCTGTTCACCACCCACTCAAACAGCCGCTGGTACACTGCC +
Preference number: 2 (lower is better)
Translates to: LPSRRGSRPRGSMTL*ILFTTHSNSRWYTA
Trigger: GGCAGTGTACCAGCGGCTGTTTGAGTGGGTGGTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR TCA 90 bp CAAGCAGTTCTTGTGCCTCAGCCTCCCGAGCAACTGGCATTACAGGCACGCGTCCAACGCTCTGCCAGGTaGTGCCCTCGCGCTCGTACT +
Preference number: 2 (lower is better)
Translates to: QAVLVPQPPEQLALQARVQRSAR*CPRART
Trigger: AGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTG...GACGCGTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR TCA 90 bp ATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCACCCACGTGCTGCTTaGGGACCCGAGACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: IRKSRPNSMVLSVGQSWRHPRAA*GPETSP
Trigger: TGGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTG...CCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTCTCAGAAGGTTTATTTaGAGCGCTGGCGGGGCGGAC +
Preference number: 2 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVLRRFI*SAGGAD
Trigger: GTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp AAGATTCGGTCAGTGATGGTGCCAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCGGCTGGAGTTGTGATTaGGGTTGGTGCGGGCATTGC +
Preference number: 2 (lower is better)
Translates to: KIRSVMVPAELQASSSTAGWSCD*GWCGHC
Trigger: GCAATGCCCGCACCAACCGCAATCACAACTCCAGCC...GGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGACCGAATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp AGCCTCCGGCAGCGCCACCTCGCCAAGGTGCCCCGCCATGCCTTCTGCAATAGCGCTGCTTGTCCTCACTaGCTCTCAGCAATTGGTAGA +
Preference number: 2 (lower is better)
Translates to: SLRQRHLAKVPRHAFCNSAACPH*LSAIGR
Trigger: TCTACCAATTGCTGAGAGGCAGTGAGGACAAGCAGC...GCTATTGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGCGCTGCCGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR TCA 90 bp CTCCAGCAGCCCCAGGTATGCGACCTGGTGGCGACAGTGGTTCTCATCCAGCTTCCCCTGCATAGTGCTTaGTCCGGAAGTCTCGGCCAA +
Preference number: 2 (lower is better)
Translates to: LQQPQVCDLVATVVLIQLPLHSA*SGSLGQ
Trigger: TTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGG...AAGCTGGATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp GTACACTGCCTTGGCACAGGCATCCCGGGCATAGCTGGCCTCAGCTGCAGTGTGTGTGATTGCGGTTGGTaGGGGCATTGCCAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: VHCLGTGIPGIAGLSCSVCDCGW*GHCQRP
Trigger: AGGCCTTTGGCAATGCCCGCACCAACCGCAATCACA...CACACTGCAGCTGAGGCCAGCTATGCCCGGGATGCCTGTGCCAAGGCAGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTG +
Preference number: 2 (lower is better)
Translates to: LGHCLVALLITVQGTVHSASVTA*WLCSSL
Trigger: CAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGC...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGCCTCAGCTGCAGTGTaGCCCTTCTCTATGAGTTCC +
Preference number: 2 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPASAAV*PFSMSS
Trigger: GGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGC...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTAAATACTCAACGCTCTaGCAGGTGATGCCCTCGCGC +
Preference number: 2 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGKYSTL*QVMPSR
Trigger: GCGCGAGGGCATCACCTGGCAGAGCGTTGAGTATTT...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGCTTTCACCCACGTGCTaGTTGAGGACCCGAGACTTC +
Preference number: 2 (lower is better)
Translates to: SCSVALLYEFPASRGNCALSPTC*LRTRDF
Trigger: GAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAG...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CCA 90 bp GACGTCCCCTGCATAGTGCTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTCCATGGTCTTGTCTGTaGGGCAGAGCTGGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: DVPCIVLDPEVSAKLHGLPWSCL*GRAGGW
Trigger: CCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGG...AAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTAGTGTCTTAAAGGGGTaGGGGTGGCAGAAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGSVLKG*GWQKWP
Trigger: TGGCCACTTCTGCCACCCCCACCCCTTTAAGACACT...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CCA 90 bp AAGATTCGGTCAGTGATGGTGCCAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCAGTTGTGATTGCGGTTaGTGCGGGCATTGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: KIRSVMVPAELQASSSTASCDCG*CGHCQR
Trigger: CCTTTGGCAATGCCCGCACCAACCGCAATCACAACT...GGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGACCGAATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CAA 90 bp TCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTGGTaGGGCCATGTGTATTCACAGGTCATCTTGTACCTGAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SRRALTAALSEPSRW*GHVYSQVILYLSRN
Trigger: ATTCCTGCTCAGGTACAAGATGACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR TCA 90 bp GGTGGGGGTGGCAGAAGTGGCCATAACACCTGTCTCCGAGCCACTCCCCTGAAGCAATGGTGGCGTTGTTaGAATACTCAACGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GGGGRSGHNTCLRATPLKQWWRC*NTQRSA
Trigger: GGCAGAGCGTTGAGTATTTCAACAACGCCACCATTG...CTTCAGGGGAGTGGCTCGGAGACAGGTGTTATGGCCACTTCTGCCACCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR GCA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTCTGTCCAAGGCACTGTaGACAGTCATGTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVLSKAL*TVMLSP
Trigger: AGGACTCAACATGACTGTGCACAGTGCCTTGGACAG...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp CCGGTCAGGGTCCAGCTTGTAGAGGTGCTGGTCTGTGAGCAGGAGGGCCCGGTTTACTCTTCCTGTTCCTaGTTCAGGATGAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: PVRVQLVEVLVCEQEGPVYSSCS*FRMSWM
Trigger: CATCCAGCTCATCCTGAAGCAGGAACAGGAAGAGTA...AACCGGGCCCTCCTGCTCACAGACCAGCACCTCTACAAGCTGGACCCTGACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTGCATGTCCAGGGTCTaGAGGAAGATTCGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVCMSRV*RKIRSV
Trigger: CACTGACCGAATCTTCCTGCAGACCCTGGACATGCA...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTTCCCAGGTGCAATATaGCAGCCAGGATGCGATGCA +
Preference number: 2 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVFPGAI*QPGCDA
Trigger: TGCATCGCATCCTGGCTGCCATATTGCACCTGGGAA...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CAA 90 bp GATCTCAGTTCGCCACAACCTCTACCTCCCAGGTTCAAGCAGTTCTaGTGCCTCAGCCTCCCGAGCAACTGGCATTACAGGCACGCGTCA +
Preference number: 2 (lower is better)
Translates to: DLSSPQPLPPRFKQF*CLSLPSNWHYRHAS
Trigger: TGACGCGTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTGAACCTGGGAGGTAGAGGTTGTGGCGAACTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR TCA 90 bp AAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGCAATGGTGGCGTTGTTaGAATACTCAACGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KSRPNSMVLSVGQSWRLVQWWRC*NTQRSA
Trigger: GGCAGAGCGTTGAGTATTTCAACAACGCCACCATTG...CACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR GCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTTTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAA +
Preference number: 2 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGLRDVP*IVLDPE
Trigger: TTCCGGATCAAGCACTATGCAGGGGACGTCACGTAA...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR TCA 90 bp CAAGCAGTTCTTGTGCCTCAGCCTCCCGAGCAACTGGCATTACAGGCACGCGTCCTGCTCCCTGGTGTGTaGAATTGTATACAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: QAVLVPQPPEQLALQARVLLPGV*NCIQQG
Trigger: ACCCTGCTGTATACAATTTCACACACCAGGGAGCAG...GACGCGTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR GCA 90 bp AAGATTCGGTCAGTGATGGTGCCAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCAGTCATGTTGAGTCCTaGTCCCTGGTGTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: KIRSVMVPAELQASSSTASHVES*SLVCEI
Trigger: AATTTCACACACCAGGGAGCAGGACTCAACATGACT...GGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGACCGAATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp AGATCCACAATGGTGGCGTTGTTGAAATACTCAACGCTCTGCCAGGTGATGCCCGGCAGAGCTGGCGGCTaGTGTAGTGTAGGTGATGGC +
Preference number: 2 (lower is better)
Translates to: RSTMVALLKYSTLCQVMPGRAGG*CSVGDG
Trigger: GCCATCACCTACACTACACCAGCCGCCAGCTCTGCC...GGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CCA 90 bp GACGTCCCCTGCATAGTGCTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTCTCAGCCCTCTGGCTTaGATTGGTGACAGCAGCGAT +
Preference number: 2 (lower is better)
Translates to: DVPCIVLDPEVSAKLHGLLSPLA*IGDSSD
Trigger: ATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAG...AAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR GCA 90 bp CCAGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACCTGTCCAAGGCACTGTaGACAGTCATGTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: PGAIWQPGCDAQTPPLQDLSKAL*TVMLSP
Trigger: AGGACTCAACATGACTGTGCACAGTGCCTTGGACAG...GTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CAA 90 bp CATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTaGGCACTGGGAGCGTGGTCCAAGTATGGTAGCGAGGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: HKLIAIMTTPEDTWA*ALGAWSKYGSEASP
Trigger: AGGTGAGGCCTCGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACA +
Preference number: 2 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVLSPAP*CVKLYT
Trigger: TGTATACAATTTCACACACCAGGGAGCAGGACTCAA...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CAA 90 bp AGCCATCTTTGTCCTGAAGTGTCTTTAGTCGCTGAGCAAACAGGCTaGATGCTGTGGGATTGTCAGTGGCAGAGGACAGGTAGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: SHLCPEVSLVAEQTG*MLWDCQWQRTGSLG
Trigger: CCCGAGACTACCTGTCCTCTGCCACTGACAATCCCACAGCATCAAGCCTGTTTGCTCAGCGACTAAAGACACTTCAGGACAAAGATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR TCA 90 bp GCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTTTCCTGACTGCTCGAAACTGTTaGCGGGAAACACCTCGAAGC +
Preference number: 2 (lower is better)
Translates to: APRRMQPWLTTILKPCFLTARNC*RETPRS
Trigger: GCTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGT...CAGGAAACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CCA 90 bp TTAAAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTTCGGTCACTGCCTGGTaGCTCTGCTCATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: LKAPRRMQPWLTTILKPCSVTAW*LCSSLS
Trigger: GGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA...ACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CCA 90 bp GCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTTTCCTGTTCCCAGGTGCAATATaGCAGCCAGGATGCGATGCA +
Preference number: 2 (lower is better)
Translates to: APRRMQPWLTTILKPCFLFPGAI*QPGCDA
Trigger: TGCATCGCATCCTGGCTGCCATATTGCACCTGGGAA...CAGGAAACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CCA 90 bp GTAGATGATATTGGGCTGCTTTGTTGTCATCATCTATTCTATTCCCTCTCCTTGCGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: VDDIGLLCCHHLFYSLSLRGPGV*PSAQPH
Trigger: ATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCG...CAAGGAGAGGGAATAGAATAGATGATGACAACAAAGCAGCCCAATATCATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR GCA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTTGTCGATGTTTCCCAGGTaGAATATGGCAGCCAGGATG +
Preference number: 2 (lower is better)
Translates to: ATHKLIAIMTTPEDTWALSMFPR*NMAARM
Trigger: CATCCTGGCTGCCATATTGCACCTGGGAAACATCGA...CAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR GCA 72 bp CAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTaGGGCGGGTGCGGGCGCTCAGCGGCTGGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: QRWRGGQLAASG*GGCGRSAAGPE
Trigger: CTCTGGCCCAGCCGCTGAGCGCCCGCACCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp TCCCCAACGCGGTTGTCCAATGGCGGCCGGGAGCGGTaGAGGCACACCACGAGGTCGTCCTGGCCGCGGGCG +
Preference number: 3 (lower is better)
Translates to: SPTRLSNGGRER*RHTTRSSWPRA
Trigger: CGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGGCCGCCATTGGACAACCGCGTTGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp GGCCGGGAGCGGTGCAGGCACACCACGAGGTCGTCCTaGCCGCGGGCGTGCAGCACCACCAGCTGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: GRERCRHTTRSS*PRACSTTSWSP
Trigger: AGGAGACCAGCTGGTGGTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 72 bp CGGGCTCTGGCTGCTCCGGCCTGGGCTCCACGGAGATaGGGCGCCGGACCCCGCGATGGCTTAGTGGGATGC +
Preference number: 3 (lower is better)
Translates to: RALAAPAWAPRR*GAGPRDGLVGC
Trigger: GCATCCCACTAAGCCATCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAGGCCGGAGCAGCCAGAGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp AAGGAGCCGCGAGCGCAGCGGAAATCGGGCTCTGGCTaGTCCGGCCTGGGCTCCACGGAGATGAGGCGCCGG +
Preference number: 3 (lower is better)
Translates to: KEPRAQRKSGSG*SGLGSTEMRRR
Trigger: CCGGCGCCTCATCTCCGTGGAGCCCAGGCCGGAGCAGCCAGAGCCCGATTTCCGCTGCGCTCGCGGCTCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp CAGCACGCCCACCAGCTCCCCAACGCGGTTGTCCAATaGCGGCCGGGAGCGGTGCAGGCACACCACGAGGTC +
Preference number: 3 (lower is better)
Translates to: QHAHQLPNAVVQ*RPGAVQAHHEV
Trigger: GACCTCGTGGTGTGCCTGCACCGCTCCCGGCCGCCATTGGACAACCGCGTTGGGGAGCTGGTGGGCGTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp GGTGAAGGAGCCGCGAGCGCAGCGGAAATCGGGCTCTaGCTGCTCCGGCCTGGGCTCCACGGAGATGAGGCG +
Preference number: 3 (lower is better)
Translates to: GEGAASAAEIGL*LLRPGLHGDEA
Trigger: CGCCTCATCTCCGTGGAGCCCAGGCCGGAGCAGCCAGAGCCCGATTTCCGCTGCGCTCGCGGCTCCTTCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp CTGTGGCCAAAGGCCACGTCCCCCTGCAGCCCGTGCTaGTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAG +
Preference number: 3 (lower is better)
Translates to: LWPKATSPCSPC*SRRALTAALSE
Trigger: CTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp GAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: EPAGSGARGPGV*PSAQPHGPPVP
Trigger: AGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 72 bp AGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTaGCGGCTGCCTTGCAGCCTGGAATCGCCGCTGCAG +
Preference number: 3 (lower is better)
Translates to: RGQRPHKVTPVE*RLPCSLESPLQ
Trigger: CTGCAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTCCCATGGCGGCCACCTaGGCCTTGATCTGGGGCATG +
Preference number: 3 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPPMAAT*ALIWGM
Trigger: CATGCCCCAGATCAAGGCCAAGGTGGCCGCCATGGG...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp CAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCAGGATaGCACGGTGGGGCCGCTCCACCAGATCCACAATGG +
Preference number: 3 (lower is better)
Translates to: QQSCRPRPARPG*HGGAAPPDPQW
Trigger: CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACGAGGCCTGCAGCTCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR GCA 72 bp CTGCAGCCCGTGCTGCTCCAGGAGAGCGCTCACGGCTaGCTTGTCGGAGCCCAGCAGGTGGTTGGGCCATGT +
Preference number: 3 (lower is better)
Translates to: LQPVLLQESAHG*LVGAQQVVGPC
Trigger: ACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp TTGCTGTGGCCAAAGGCCACGTCCCCCTGCAGCCCGTaGTGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCG +
Preference number: 3 (lower is better)
Translates to: LLWPKATSPCSP*CSRRALTAALS
Trigger: CGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp CTGGGCTCCACGGAGATGAGGCGCCGGACCCCGCGATaGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCC +
Preference number: 3 (lower is better)
Translates to: LGSTEMRRRTPR*LSGMQSETRTS
Trigger: GGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp CCACACAAGGTCACGCCCGTAGAGTGGCGGCTGCCTTaGAGCCTGGAATCGCCGCTGCAGCTCAGCCAGGTG +
Preference number: 3 (lower is better)
Translates to: PHKVTPVEWRLP*SLESPLQLSQV
Trigger: CACCTGGCTGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGACCTTGTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp ACCAGTGTCCGGGGTGAGCGGATGAACAGCTTGCTGTaGCCAAAGGCCACGTCCCCCTGCAGCCCGTGCTGC +
Preference number: 3 (lower is better)
Translates to: TSVRGERMNSLL*PKATSPCSPCC
Trigger: GCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGACACTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTTTGAGCAGCACGTCCTaGACCCTCTCCACCTCAGCC +
Preference number: 3 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPLSSTS*TLSTSA
Trigger: GGCTGAGGTGGAGAGGGTCAAGGACGTGCTGCTCAA...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 72 bp CTTGCAGCCTGGAATCGCCGCTGCAGCTCAGCCAGGTaGGCCCGCACCTTGTGTCTCCGGAACCAGCGCATG +
Preference number: 3 (lower is better)
Translates to: LAAWNRRCSSAR*ARTLCLRNQRM
Trigger: CATGCGCTGGTTCCGGAGACACAAGGTGCGGGCTCACCTGGCTGAGCTGCAGCGGCGATTCCAGGCTGCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp ACCAGTGCCTCCTCGGCCACTGCCAGGCCCTCCTTCTaGAGCCCACCCTCCTCCGTCTCCACAAACTCGATG +
Preference number: 3 (lower is better)
Translates to: TSASSATARPSF*SPPSSVSTNSM
Trigger: CATCGAGTTTGTGGAGACGGAGGAGGGTGGGCTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCACTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR GCA 72 bp ATGAACAGCTTGCTGTGGCCAAAGGCCACGTCCCCCTaGAGCCCGTGCTGCTCCAGGAGAGCGCTCACGGCT +
Preference number: 3 (lower is better)
Translates to: MNSLLWPKATSP*SPCCSRRALTA
Trigger: AGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCACTCAGAAGGTTTATTaGCAGCGCTGGCGGGGCGGA +
Preference number: 3 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCTQKVY*QRWRGG
Trigger: TCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 72 bp GCCGGTCAGGGTCCAGCTTGTAGAGGTGCTGGTCTGTaGGCAGGAGGGCCCGGTTCCGGATCTTGTGGAAGC +
Preference number: 3 (lower is better)
Translates to: AGQGPACRGAGL*AGGPGSGSCGS
Trigger: GCTTCCACAAGATCCGGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCTACAAGCTGGACCCTGACCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTCGCTGGTACACTGCCTaGGCACAGGCATCCCGGGCA +
Preference number: 3 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGRWYTA*AQASRA
Trigger: TGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGCG...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CAA 90 bp ATCCACAATGGTGGCGTTGTTGAAATACTCAACGCTCTGCCAGGTGATGCCCTCTGGCGGGGCGGACAATaGGCGGCCTCGGGGTGCGGC +
Preference number: 3 (lower is better)
Translates to: IHNGGVVEILNALPGDALWRGGQ*AASGCG
Trigger: GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCA...GAGGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp AGCTGGTCTCCTCCGCTGGTCACGCTCAGCCCCGTCACCGCCTCAAGGGGCACGAACTGCTCGAAACTGTaGACGGGAAACACCTCGAAG +
Preference number: 3 (lower is better)
Translates to: SWSPPLVTLSPVTASRGTNCSKL*TGNTSK
Trigger: CTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGTT...CGTGCCCCTTGAGGCGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp CTTGGCACAGGCATCCCGGGCATAGCTGGCCTCAGCTaGAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: LGTGIPGIAGLS*SVALLYEFPAS
Trigger: GGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGCCAGCTATGCCCGGGATGCCTGTGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 72 bp ACCCCTGAAGACACCTGGGCTTTGGCACTGGGAGCGTaGTCCAAGTATGGTAGCGAGGCCTCACCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: TPEDTWALALGA*SKYGSEASPGS
Trigger: GCTCCCAGGTGAGGCCTCGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CAA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGCCCTCTGGCTTGGATaGGTGACAGCAGCGATGTAC +
Preference number: 3 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPALWLG*VTAAMY
Trigger: GTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGC...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp GGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCATGTCCAGGGAGTTCATGCAGCTGCTaGTCCTCACTGCCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: GRAGGWCSVGDGGGACPGSSCSC*SSLPLS
Trigger: GCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACT...CCCTGGACATGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 72 bp CATAGCTGGCCTCAGCTGCAGTGTGGCCCTTCTCTATaGGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCA +
Preference number: 3 (lower is better)
Translates to: HSWPQLQCGPSL*VPCLPRQLCEP
Trigger: TGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGCCAGCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR TCA 72 bp AGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTTaGAGAGTGTGCCAGCCGTCAGGGGGCGCTTGGTCA +
Preference number: 3 (lower is better)
Translates to: RQGSPPGPPWSS*RVCQPSGGAWS
Trigger: TGACCAAGCGCCCCCTGACGGCTGGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp GATGTGGGTGGGAGGGGGCCCTTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAAGTCTCGGCCAAACTC +
Preference number: 3 (lower is better)
Translates to: DVGGRGPLRDVP*IVLDPEVSAKL
Trigger: GAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTCACGTAAGGGCCCCCTCCCACCCACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CCA 72 bp CTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGC +
Preference number: 3 (lower is better)
Translates to: LKPMTLMASVTA*WLCSSLSKALC
Trigger: GCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CAA 90 bp ATGTCCAGCACGCCAATGACTGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCTGTGCACAGTCATGTaGAGTCCTGCTCCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: MSSTPMTVSLPSRRGSRPLCTVM*SPAPWC
Trigger: ACACCAGGGAGCAGGACTCAACATGACTGTGCACAG...GGGCCGGGATCCTCGGCGTGATGGCAAGGACACAGTCATTGGCGTGCTGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CAA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGCCAATGACTGTGTCCTaGCCATCACGCCGAGGATCC +
Preference number: 3 (lower is better)
Translates to: SCSVALLYEFPASRGNCAPMTVS*PSRRGS
Trigger: GGATCCTCGGCGTGATGGCAAGGACACAGTCATTGG...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR-3UTR CAA 90 bp AAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGCCAAACTCCATGGTCTaGTCTGTGGGGCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: KSRPNSMVLSVGQSWRLVPNSMV*SVGQSW
Trigger: CCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGG...CACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CCA 72 bp TCCAGCAGCCCCAGGTATGCGACCTGGTGGCGACAGTaGTTCTCATCCAGCTTCCCAGCTACCTTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: SSSPRYATWWRQ*FSSSFPATLSS
Trigger: TGAGGACAAGGTAGCTGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp ACCCTCACATTCTCCAGCAGCCCCAGGTATGCGACCTaGTGGCGACAGTGGTTCTCATCCAGCTTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: TLTFSSSPRYAT*WRQWFSSSFPA
Trigger: AGCTGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGAGAATGTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp ACCCCGCGATGGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGACAATGGTGGCGTTGTaGAAATACTCAACGCTCTGC +
Preference number: 3 (lower is better)
Translates to: TPRWLSGMQSETRTSRVRTMVAL*KYSTLC
Trigger: GCAGAGCGTTGAGTATTTCAACAACGCCACCATTGT...CCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATCGCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp CTTGGAGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTTGAAGAGTGTGCCGTGGGGTCCGTGCTGTaGTACAGCAGCCGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: LGGKVLHQGHHGVLEECAVGSVL*YSSRLK
Trigger: CTTCAAGCGGCTGCTGTACAACAGCACGGACCCCAC...GGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp AGCAGCACGTCCTTGACCCTCTCCACCTCAGCCCTCTaGCTTGGATTGGTGACAGCAGCGATGTACTGCATG +
Preference number: 3 (lower is better)
Translates to: SSTSLTLSTSAL*LGLVTAAMYCM
Trigger: CATGCAGTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAGGTGGAGAGGGTCAAGGACGTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp AGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTaGTTGGGCCATGTGTATTCACAGGTCATCTTGTAC +
Preference number: 3 (lower is better)
Translates to: RALTAALSEPSR*LGHVYSQVILY
Trigger: GTACAAGATGACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp TGGTCTGTGAGCAGGAGGGCCCGGTTCCGGATCTTGTaGAAGCGGTTCACCTTGCGGACATGGCTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: WSVSRRARFRIL*KRFTLRTWLEK
Trigger: CTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCCACAAGATCCGGAACCGGGCCCTCCTGCTCACAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp GACGTCCCCTGCATAGTGCTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTAGCACACAGGTGGACTaGAGCAGCACGTCCTTGACC +
Preference number: 3 (lower is better)
Translates to: DVPCIVLDPEVSAKLHGLSTQVD*SSTSLT
Trigger: GGTCAAGGACGTGCTGCTCAAGTCCACCTGTGTGCT...AAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp AGATCCACAATGGTGGCGTTGTTGAAATACTCAACGCTCTGCCAGGTGATGCCCCGGTTGGTGCGGGCATaGCCAAAGGCCTCCAGCACA +
Preference number: 3 (lower is better)
Translates to: RSTMVALLKYSTLCQVMPRLVRA*PKASST
Trigger: TGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACCG...GGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp CCACAACCTCTACCTCCCAGGTTCAAGCAGTTCTTGTaGCTCAGCCTCCCGAGCAACTGGCATTACAGGCAC +
Preference number: 3 (lower is better)
Translates to: PQPLPPRFKQFL*LSLPSNWHYRH
Trigger: GTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTGAACCTGGGAGGTAGAGGTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CAA 90 bp CTCCAGCAGCCCCAGGTATGCGACCTGGTGGCGACAGTGGTTCTCATCCAGCTTCCCTGGTGTGTGAAATaGTATACAGCAGGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: LQQPQVCDLVATVVLIQLPWCVK*YTAGFL
Trigger: GAGAAACCCTGCTGTATACAATTTCACACACCAGGG...AAGCTGGATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR TCA 72 bp GTAGAGTGGGGTCCGTGCTGTTGTACAGCAGCCGCTTaGAGTCCTGGAAGAGGAAATCTCTGTTCTTGTCGA +
Preference number: 3 (lower is better)
Translates to: VEWGPCCCTAAA*SPGRGNLCSCR
Trigger: TCGACAAGAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCTGCTGTACAACAGCACGGACCCCACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR GCA 72 bp TCTCCAAGTGCAGTTCATGCAGCTGCTTGTCCTCACTaGCTCTCAGCAATTGGTAGAAGGCGTGGAAGTTTC +
Preference number: 3 (lower is better)
Translates to: SPSAVHAAACPH*LSAIGRRRGSF
Trigger: GAAACTTCCACGCCTTCTACCAATTGCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACTGCACTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CCA 72 bp AAGTTAATAGCCATCATGACAACCCCTGAAGACACCTaGGCTTTGGCACTGGGAGCGTGGTCCAAGTATGGT +
Preference number: 3 (lower is better)
Translates to: KLIAIMTTPEDT*ALALGAWSKYG
Trigger: ACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR-3UTR CAA 90 bp CCACTATCCTCAAACCCTGTTTCCTGCTCTTCACTTGTGAATCTGCTGTCCGGCTCCACAATGGTGGCGTaGTTGAAATACTCAACGCTC +
Preference number: 3 (lower is better)
Translates to: PLSSNPVSCSSLVNLLSGSTMVA*LKYSTL
Trigger: GAGCGTTGAGTATTTCAACAACGCCACCATTGTGGA...GCCGGACAGCAGATTCACAAGTGAAGAGCAGGAAACAGGGTTTGAGGATAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CCA 72 bp AAGGCACTGTGCACAGTCATGTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: KALCTVMLSPAP*CVKLYTAGFLS
Trigger: GGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGCAGGACTCAACATGACTGTGCACAGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR GCA 72 bp TGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTaGAGTTCATGCAGCTGCTTGTCCTCACTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: CVKLYTAGFLSK*SSCSCLSSLPL
Trigger: GAGAGGCAGTGAGGACAAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR-3UTR CAA 90 bp CGGCAAGCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGCCCTGGTGTGTGAAATaGTATACAGCAGGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: RQATHKLIAIMTTPEDTWPWCVK*YTAGFL
Trigger: GAGAAACCCTGCTGTATACAATTTCACACACCAGGG...CCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGCTTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR TCA 72 bp CACTATCCTCAAACCCTGTTTCCTGCTCTTCACTTGTaGATCTGCTGTCCGGCATGTTTCAGTGTCTTAAAG +
Preference number: 3 (lower is better)
Translates to: HYPQTLFPALHL*ICCPACFSVLK
Trigger: CTTTAAGACACTGAAACATGCCGGACAGCAGATTCACAAGTGAAGAGCAGGAAACAGGGTTTGAGGATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp CTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGTCCCCCTGCAGCCCGTaGTGCTCCAGGAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: LQGAALPAAGGGVRAATRSPCSP*CSRRAL
Trigger: GAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGA...CCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCAAAGGCCACGTCCCCCTaGAGCCCGTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAKATSP*SPCCSR
Trigger: CCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTT...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGCCGGGCCCGCCACCTaGAGAAGAGTGCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRAGPAT*RRVRGR
Trigger: CCTGCCACGCACTCTTCTGCAGGTGGCGGGCCCGGC...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCAGGCTCTGCTCCAGTGTaGCCAGTGTCCGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAGSAPV*PVSGVS
Trigger: GCTCACCCCGGACACTGGTCACACTGGAGCAGAGCC...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCGCCAGGCCCTCCTTCTaGAGCCCACCCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAAARPSF*SPPSSV
Trigger: GACGGAGGAGGGTGGGCTGCAGAAGGAGGGCCTGGC...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCTCCTGGCCGCGGGCGTaGAGCACCACCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAASWPRA*STTSWS
Trigger: AGACCAGCTGGTGGTGCTGCACGCCCGCGGCCAGGA...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGGCGGCCGGGAGCGGTaGAGGCACACCACGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRGGRER*RHTTRS
Trigger: CGACCTCGTGGTGTGCCTGCACCGCTCCCGGCCGCC...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCACGCTACCGCCCAGCCTaGACTCACCCCTGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPARYRPA*THPWQC
Trigger: ACACTGCCAGGGGTGAGTGCAGGCTGGGCGGTAGCG...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCGTCACGCCCGTAGAGTaGCGGCTGCCTTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGVTPVE*RLPCSL
Trigger: CAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGAC...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCAGCTGGTCTCCTCCGCTaGTCACGCTCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAAGLLR*SRSAPS
Trigger: TGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGC...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCATGCAGCTCAGCCAGGTaGGCCCGCACCTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPACSSAR*ARTLCL
Trigger: GAGACACAAGGTGCGGGCTCACCTGGCTGAGCTGCA...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCAGAGGTGCTGGTCTGTaGGCAGGAGGGCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAARGAGL*AGGPGS
Trigger: GGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCT...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGTCACCCCTGGCAGTGTaGGGCCAGCACGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: NLQGAALPAAGGGVRAATSPLAV*GQHAHQ
Trigger: CTGGTGGGCGTGCTGGCCGCACACTGCCAGGGGTGA...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCGCGAACCTCCAGGGTaGGGCCCTCCCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGREPPG*GPPCGR
Trigger: CCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCG...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCCGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAARGPGV*PSAQPH
Trigger: ATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCG...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GCCCCGTCACCGCCTCAAGGGGCACGGCCCGCATCACCCGGTACTGCCGGTCAGGCCCGTCCGGCCACATaGCCCGTAGAGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: APSPPQGARPASPGTAGQARPAT*PVEWGP
Trigger: CGGACCCCACTCTACGGGCCATGTGGCCGGACGGGC...CTGACCGGCAGTACCGGGTGATGCGGGCCGTGCCCCTTGAGGCGGTGACGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGGCCCGTCCGGCCACATaGCCCGTAGAGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGARPAT*PVEWGP
Trigger: CGGACCCCACTCTACGGGCCATGTGGCCGGACGGGC...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCTGCAGCACCACCAGCTaGTCTCCTCCGCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGCSTTS*SPPLVT
Trigger: CGTGACCAGCGGAGGAGACCAGCTGGTGGTGCTGCA...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGACCACGAGGTCGTCCTaGCCGCGGGCGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQTTRSS*PRACST
Trigger: GGTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGT...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCATCCGGGGTGAGCGGATaGACAGCTTGCTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPASGVSG*TACCGQ
Trigger: TTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGA...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCCGGCCACCTTGGCCTTaGTCTGGGGCATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGRPPWP*SGACLK
Trigger: CTTCAGACATGCCCCAGATCAAGGCCAAGGTGGCCG...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCACGGCAGCCCCAGTCCTaGCGAAGCCCTTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSRQPQS*RSPCRA
Trigger: GGCCCTGCAAGGGCTTCGTCAGGACTGGGGCTGCCG...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCAGGACCGGTGCTTCATTaGCTTGTAGGCGGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAGPVLH*LVGGVG
Trigger: GCCAACGCCGCCTACAAGGCAATGAAGCACCGGTCC...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCACCAGCACGGCCAGGATaGCACGGTGGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSPARPG*HGGAAP
Trigger: TGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGG...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCCCTGCAGCCCGTGCTaGTCCAGGAGAGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGPCSPC*SRRALT
Trigger: CGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGG...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCCAGGATGCCACGGTaGGGCCGCTCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRARMPR*GRSTRS
Trigger: GGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGC...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCCTGCACTCACCCCTaGCAGTGTGCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRACTHP*QCAAST
Trigger: CGTGCTGGCCGCACACTGCCAGGGGTGAGTGCAGGC...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCTGCCCCACTCTCCCCTaGGATGACGATGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAACPTLP*DDDAGV
Trigger: GACACCTGCATCGTCATCTCAGGGGAGAGTGGGGCA...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCCACCCACGTGCTGCTTaGGGACCCGAGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRHPRAA*GPETSP
Trigger: TGGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTG...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCGGAAGATTCGGTCAGTaGTGGTGCCAGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGGRFGQ*WCQQSC
Trigger: GCAGCTCTGCTGGCACCATCACTGACCGAATCTTCC...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCCTTCCACGGAGTACGTaGCGTCCCCTGCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGLPRST*RPLHSA
Trigger: AGCACTATGCAGGGGACGTCACGTACTCCGTGGAAG...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GCTGCAGCACAGCAGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTGGCGTGGGCCAGAGCAGGGTaGAGGAGCCGCGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AAAQQGAAATQGHARRVAWARAG*RSRERS
Trigger: GCTGCGCTCGCGGCTCCTTCACCCTGCTCTGGCCCA...CGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGTGCTGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCGGCTGGAGTTGTGATTaGGGTTGGTGCGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGGWSCD*GWCGHC
Trigger: GCAATGCCCGCACCAACCGCAATCACAACTCCAGCC...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGTGCCTCCTCGGCCACTaGCAGGCCCTCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQCLLGH*QALLLQ
Trigger: CTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCA...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCACCTCTGTGATGTCCTaGTGCCCGTCCGGCCACATG +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRTSVMS*CPSGHM
Trigger: CATGTGGCCGGACGGGCAGCAGGACATCACAGAGGT...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGGAGAGCGCTCACGGCTaGCTTGTCGGAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGESAHG*LVGAQQ
Trigger: CTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTC...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCCCCTGCAGCCCGTGCTaGTCCAGGAGAGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: PCLPRQLCEPAGSGARGPPCSPC*SRRALT
Trigger: CGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGG...GGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCCACCTCGCCAAGGTaGCCCGCCATGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRATSPR*PAMPSA
Trigger: TGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGC...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGTGTCCTGGAAGGGCTaGAGCACAGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQVSWKG*STAGGS
Trigger: GCTGCCCCCTGCTGTGCTGCAGCCCTTCCAGGACAC...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCACCACCTGCAGAAGAGTaGGTGGCAGGTGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAPPAEE*VAGVLE
Trigger: TTCCAGGACACCTGCCACGCACTCTTCTGCAGGTGG...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGATGTTCTTCACCAGCTaGCGGGCCCGCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: NLQGAALPAAGGGVRAATMFFTS*RARHLQ
Trigger: CTGCAGGTGGCGGGCCCGGCAGCTGGTGAAGAACAT...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGCTCCCCCTGGCAGTGTaGGGCCAGCACGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRLPLAV*GQHAHQ
Trigger: CTGGTGGGCGTGCTGGCCGCACACTGCCAGGGGGAG...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCCTGGTACCTGGCGATaGCCTCAGGCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: NLQGAALPAAGGGVRAATPGTWR*PQAHTG
Trigger: CCCTGTATGGGCCTGAGGCCATCGCCAGGTACCAGG...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCATCCCGGGCATAGCTaGCCTCAGCTGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRHPGHS*PQLQCG
Trigger: GCCACACTGCAGCTGAGGCCAGCTATGCCCGGGATG...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGCTGGTACACTGCCTTaGCACAGGCATCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRAGTLP*HRHPGH
Trigger: ATGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGC...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGGCCCGTCCGGCCACATaGCCCGTAGAGTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGARPAT*PVEWGP
Trigger: CGGACCCCACTCTACGGGCCATGTGGCCGGACGGGC...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGAACGCGGTTGTCCAATaGCGGCCGGGAGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGNAVVQ*RPGAVQ
Trigger: CTGCACCGCTCCCGGCCGCCATTGGACAACCGCGTT...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GCCCCGTCACCGCCTCAAGGGGCACGGCCCGCATCACCCGGTACTGCCGGTCAGCAACGCTCTGCCAGGTaGTGCCCTCGCGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: APSPPQGARPASPGTAGQQRSAR*CPRART
Trigger: AGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTG...CTGACCGGCAGTACCGGGTGATGCGGGCCGTGCCCCTTGAGGCGGTGACGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGCAACGCTCTGCCAGGTaGTGCCCTCGCGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGQRSAR*CPRART
Trigger: AGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTG...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCACCACCATGGAGTTCTTaGAGAGTGTGCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAPPWSS*RVCQPS
Trigger: TGACGGCTGGCACACTCTTCAAGAACTCCATGGTGG...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTCGGCAGCCCCAGTCCTaGCGAAGCCCTTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPRQPQS*RSPCRA
Trigger: GGCCCTGCAAGGGCTTCGTCAGGACTGGGGCTGCCG...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CCGGGAGCGGTGCAGGCACACCACGAGGTCGTCCTGGCCGCGGGCGTGCAGCACGGTTGGTGCGGGCATTaGCAAAGGCCTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: PGAVQAHHEVVLAAGVQHGWCGH*QRPPAH
Trigger: GTGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACC...GTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGCCAGGCCCTCCTTCTaGAGCCCACCCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRARPSF*SPPSSV
Trigger: GACGGAGGAGGGTGGGCTGCAGAAGGAGGGCCTGGC...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCTGTGATGTCCTGCTaGCCGTCCGGCCACATGGCC +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGSVMSC*PSGHMA
Trigger: GGCCATGTGGCCGGACGGGCAGCAGGACATCACAGA...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGCAGCAGCCCCAGGTATaGGACCTGGTGGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGQQPQV*DLVATV
Trigger: CACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTG...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGAGGCGGGCTCGGCTCTaGTCCAGTGTGACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AVGDANLQGAALPAAGGGRRARL*SSVTSV
Trigger: GACACTGGTCACACTGGAGCAGAGCCGAGCCCGCCT...CCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGAGTGGCGGCTGCCTTaGAGCCTGGAATCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSEWRLP*SLESPL
Trigger: CAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTC...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCCGCATCACCCGGTACTaGCGGTCAGGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVRITRY*RSGSSL
Trigger: CAAGCTGGACCCTGACCGGCAGTACCGGGTGATGCG...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGCCATGGTCTTGTCTGTaGGGCAGAGCTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGPWSCL*GRAGGW
Trigger: CCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGG...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGTGGCAGGTGTCCTaGAAGGGCTGCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRAWQVS*KGCSTA
Trigger: TGCTGTGCTGCAGCCCTTCCAGGACACCTGCCACGC...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCATCTGGCTTGGATTGGTaGCAGCAGCGATGTACTGCA +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPASGLDW*QQRCTA
Trigger: TGCAGTACATCGCTGCTGTCACCAATCCAAGCCAGA...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCGACCAGTGTCCGGGGTaGGCGGATGAACAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVDQCPG*ADEQLA
Trigger: AGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTC...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCCGGCAGCCCCAGTCCTaGCGAAGCCCTTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGRQPQS*RSPCRA
Trigger: GGCCCTGCAAGGGCTTCGTCAGGACTGGGGCTGCCG...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGAGAGGTGCTGGTCTGTaGGCAGGAGGGCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGRGAGL*AGGPGS
Trigger: GGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCT...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTGGGCCAGAGCAGGGTaGAGGAGCCGCGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGWARAG*RSRERS
Trigger: GCTGCGCTCGCGGCTCCTTCACCCTGCTCTGGCCCA...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGTTGGTGCGGGCATTaGCAAAGGCCTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQGWCGH*QRPPAH
Trigger: GTGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACC...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCACACATGGTCCACCAGTaGCTCCTCGGCCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSHMVHQ*LLGHCQ
Trigger: CTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTG...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GCCCCGTCACCGCCTCAAGGGGCACGGCCCGCATCACCCGGTACTGCCGGTCAGACCTCTGTGATGTCCTaGTGCCCGTCCGGCCACATG +
Preference number: 4 (lower is better)
Translates to: APSPPQGARPASPGTAGQTSVMS*CPSGHM
Trigger: CATGTGGCCGGACGGGCAGCAGGACATCACAGAGGT...CTGACCGGCAGTACCGGGTGATGCGGGCCGTGCCCCTTGAGGCGGTGACGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGAAGGCCACGTCCCCCTaGAGCCCGTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAKATSP*SPCCSR
Trigger: CCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTT...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCGCCACCTCGCCAAGGTaGCCCGCCATGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRQLSHMVHQCLLGHCQAATSPR*PAMPSA
Trigger: TGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGC...GGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCCGGGCCCGCCACCTaGAGAAGAGTGCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGAGPAT*RRVRGR
Trigger: CCTGCCACGCACTCTTCTGCAGGTGGCGGGCCCGGC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCTCCATCCTGCCGGCTaGAAACACCTTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: NLQGAALPAAGGGVRAATLHPAG*KHLASP
Trigger: AGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAG...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCGATGCAGGTGTCCCTaGACCGGTGCTTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRRCRCP*TGASLP
Trigger: AGGCAATGAAGCACCGGTCCAGGGACACCTGCATCG...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVASVTA*WLCSSL
Trigger: CAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGC...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCGCCTCAGCTGCAGTGTaGCCCTTCTCTATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAAASAAV*PFSMSS
Trigger: GGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGC...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGGCCAGGATGCCACGGTaGGGCCGCTCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: GVWPSAQPHGPPVPPRPLARMPR*GRSTRS
Trigger: GGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGC...CAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGCCAGGATGCCACGGTaGGGCCGCTCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAARMPR*GRSTRS
Trigger: GGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGC...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCGGCAGAGCTGGCGGCTaGTGTAGTGTAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVGRAGG*CSVGDG
Trigger: GCCATCACCTACACTACACCAGCCGCCAGCTCTGCC...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACCTGGTGGCGACAGTaGTTCTCATCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAATWWRQ*FSSSFP
Trigger: TGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGT...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCCAGGTATGCGACCTaGTGGCGACAGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRPRYAT*WRQWFS
Trigger: TGAGAACCACTGTCGCCACCAGGTCGCATACCTGGG...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTGGCTGCCTTGCAGCCTaGAATCGCCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGGCLAA*NRRCSS
Trigger: TGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCC...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGCTGCAGAAGAGTGCGTaGCAGGTGTCCTGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGLQKSA*QVSWKG
Trigger: GCCCTTCCAGGACACCTGCCACGCACTCTTCTGCAG...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCGGTTCCGGATCTTGTaGAAGCGGTTCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRRFRIL*KRFTLR
Trigger: CCGCAAGGTGAACCGCTTCCACAAGATCCGGAACCG...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCGCGGAAATCGGGCTCTaGCTGCTCCGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCAEIGL*LLRPGL
Trigger: GAGCCCAGGCCGGAGCAGCCAGAGCCCGATTTCCGC...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp ACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCTGCCCCACTCTCCCCTaGGATGACGATGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: TVRASRERSTRSRGVAVSCPTLP*DDDAGV
Trigger: GACACCTGCATCGTCATCTCAGGGGAGAGTGGGGCA...GCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR TCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACTGCTCGAAACTGTTaGCGGGAAACACCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAATARNC*RETPRS
Trigger: GCTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGT...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGCCCCTGCATAGTGCTTaGTCCGGAAGTCTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRPLHSA*SGSLGQ
Trigger: TTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGG...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp ACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCGACCAGTGTCCGGGGTaGGCGGATGAACAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TVRASRERSTRSRGVAVSDQCPG*ADEQLA
Trigger: AGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTC...GCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGTGGGCTCCACGGAGATaGGGCGCCGGACCCCGCGAT +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAWAPRR*GAGPRD
Trigger: ATCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCA...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGCGGCTGGAAACACCTTaGCTCACCTTCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GDANLQGAALPAAGGGVRRLETP*LTFLCL
Trigger: CAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCG...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCAGCACAAAGTCAGGTTTaGCATACTCAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAAQSQV*HTQGLP
Trigger: AGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGC...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCTTCTCGAACCTGAGCTaGAGGTTCCTCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGFSNLS*RFLMKS
Trigger: GGACTTCATGAGGAACCTGCAGCTCAGGTTCGAGAA...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCTGTCCAAGGCACTGTaGACAGTCATGTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LQGAALPAAGGGVRAATRLSKAL*TVMLSP
Trigger: AGGACTCAACATGACTGTGCACAGTGCCTTGGACAG...CCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCATATGGCAGCCAGGATaGGATGCACAGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAAIWQPG*DAQTPP
Trigger: AGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATAT...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCCAGCACGGCCAGGATaGCACGGTGGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCPARPG*HGGAAP
Trigger: TGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGG...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCTGCATGTCCAGGGTCTaGAGGAAGATTCGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAACMSRV*RKIRSV
Trigger: CACTGACCGAATCTTCCTGCAGACCCTGGACATGCA...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRVRDVP*IVLDPE
Trigger: TTCCGGATCAAGCACTATGCAGGGGACGTCACGTAC...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGAAGCGAAGCCAGCCCTaGGGACCCTCACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGKRSQP*GPSHSP
Trigger: TGGAGAATGTGAGGGTCCGCAGGGCTGGCTTCGCTT...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGAGAGCGCTCACGGCTaGCTTGTCGGAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAESAHG*LVGAQQ
Trigger: CTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTC...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCCCCCGCCATGCCTTCTaGAATAGCAGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRPRHAF*NSSTMM
Trigger: CATCATTGTGCTGCTATTGCAGAAGGCATGGCGGGG...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGGAGTGGCGGCTGCCTTaGAGCCTGGAATCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWEWRLP*SLESPL
Trigger: CAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTC...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGTGTCCTGGAAGGGCTaGAGCACAGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAVSWKG*STAGGS
Trigger: GCTGCCCCCTGCTGTGCTGCAGCCCTTCCAGGACAC...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCAGGAAGCGGTTCACCTTaGGGACATGGCTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAGSGSP*GHGLKR
Trigger: TCTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCC...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTCCTGGCCGCGGGCGTaGAGCACCACCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGSWPRA*STTSWS
Trigger: AGACCAGCTGGTGGTGCTGCACGCCCGCGGCCAGGA...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGAAATCGGGCTCTGGCTaGTCCGGCCTGGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAKSGSG*SGLGST
Trigger: CGTGGAGCCCAGGCCGGAGCAGCCAGAGCCCGATTT...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GGCTCTGGCTGCTCCGGCCTGGGCTCCACGGAGATGAGGCGCCGGACCCCGCGACACTCTCCCCTGAGCTaGAGGTTCCTCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSGCSGLGSTEMRRRTPRHSPLS*RFLMKS
Trigger: GGACTTCATGAGGAACCTGCAGCTCAGGGGAGAGTG...TCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAGGCCGGAGCAGCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCCCTTGTAGGCGGCGTTaGCCACAGCATAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVPCRRR*PQHRDG
Trigger: CCCATCTCTATGCTGTGGCCAACGCCGCCTACAAGG...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCTCAGCCCTCTGGCTTaGATTGGTGACAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: NLQGAALPAAGGGVRAATLSPLA*IGDSSD
Trigger: ATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAG...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCAGTTGTGATTGCGGTTaGTGCGGGCATTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRSCDCG*CGHCQR
Trigger: CCTTTGGCAATGCCCGCACCAACCGCAATCACAACT...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTGTCAGCTCAGCCACATaGTCCACCAGTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGVSSAT*STSASS
Trigger: CGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGAC...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCACATCCCGGGCATAGCTaGCCTCAGCTGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QLCEPAGSGARGPGVWPSHPGHS*PQLQCG
Trigger: GCCACACTGCAGCTGAGGCCAGCTATGCCCGGGATG...TGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCCAGGATGCCACGGTaGGGCCGCTCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGARMPR*GRSTRS
Trigger: GGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCTCGGCCAAACTCCATaGTCTTGTCTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NLQGAALPAAGGGVRAATLGQTP*SCLWGR
Trigger: TCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAG...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGATGAACAGCTTGCTGTaGCCAAAGGCCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQMNSLL*PKATSP
Trigger: GGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCAT...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGTGCAGCACCACCAGCTaGTCTCCTCCGCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRCSTTS*SPPLVT
Trigger: CGTGACCAGCGGAGGAGACCAGCTGGTGGTGCTGCA...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGACCACGAGGTCGTCCTaGCCGCGGGCGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGATTRSS*PRACST
Trigger: GGTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGT...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGTGCGGCCCTCCCCCTaGCAGTGTGCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVVRPSP*QCAAST
Trigger: CGTGCTGGCCGCACACTGCCAGGGGGAGGGCCGCAC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGGTGCGGCCCTCCCCCTaGCAGTGTGCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGVRPSP*QCAAST
Trigger: CGTGCTGGCCGCACACTGCCAGGGGGAGGGCCGCAC...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCGGAAATCGGGCTCTaGCTGCTCCGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGAEIGL*LLRPGL
Trigger: GAGCCCAGGCCGGAGCAGCCAGAGCCCGATTTCCGC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCCTGAGCAAACAGGCTTaGTGCTGTGGGATTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRLSKQA*CCGIVS
Trigger: ACTGACAATCCCACAGCATCAAGCCTGTTTGCTCAG...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCAGTGTCTTTAGTCGCTaGGCAAACAGGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGSVFSR*ANRLDA
Trigger: AGCATCAAGCCTGTTTGCTCAGCGACTAAAGACACT...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp CCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCACTCTTGGCCTCAGGTaGTCCACCCACTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PCLPRQLCEPAGSGARGPTLGLR*STHFGL
Trigger: GAGGCCAAAGTGGGTGGATCACCTGAGGCCAAGAGT...GGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp CCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCCGGCTGGAAACACCTTaGCTCACCTTCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PCLPRQLCEPAGSGARGPRLETP*LTFLCL
Trigger: CAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCG...GGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGACCTCTGTGATGTCCTaGTGCCCGTCCGGCCACATG +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGTSVMS*CPSGHM
Trigger: CATGTGGCCGGACGGGCAGCAGGACATCACAGAGGT...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCGGCCGGGAGCGGTaGAGGCACACCACGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASGGRER*RHTTRS
Trigger: CGACCTCGTGGTGTGCCTGCACCGCTCCCGGCCGCC...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCACTCCCCCTGGCAGTGTaGGGCCAGCACGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGALPLAV*GQHAHQ
Trigger: CTGGTGGGCGTGCTGGCCGCACACTGCCAGGGGGAG...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGTCACCTTCCTGTGCCTaGTGGAAGGACAGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRSPSCA*WKDSEG
Trigger: TCCTTCACTGTCCTTCCAGCAGGCACAGGAAGGTGA...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGAGCATAGAGATGGGGTaGCCGCTCATAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: AVGDANLQGAALPAAGGGSIEMG*PLIELT
Trigger: CGTGAGCTCTATGAGCGGCCACCCCATCTCTATGCT...CCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCATCGGTCACTGCCTGGTaGCTCTGCTCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSSVTAW*LCSSLS
Trigger: GGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRRGPGV*PSAQPH
Trigger: ATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCG...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGTATGCGACCTGGTaGCGACAGTGGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVRYATW*RQWFSS
Trigger: GGATGAGAACCACTGTCGCCACCAGGTCGCATACCT...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCGGAGCCCAGCAGGTaGTTGGGCCATGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGSEPSR*LGHVYS
Trigger: TGAATACACATGGCCCAACCACCTGCTGGGCTCCGA...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTGCGTGGCAGGTGTCCTaGAAGGGCTGCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPAWQVS*KGCSTA
Trigger: TGCTGTGCTGCAGCCCTTCCAGGACACCTGCCACGC...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGCTGCAGAAGAGTGCGTaGCAGGTGTCCTGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGLQKSA*QVSWKG
Trigger: GCCCTTCCAGGACACCTGCCACGCACTCTTCTGCAG...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
3UTR CAA 72 bp GCCACACAAGGTCACGCCCGTAGAGTGGCGGCTGCCTaGCAGCCTGGAATCGCCGCTGCAGCTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ATQGHARRVAAA*QPGIAAAAQPG
Trigger: ACCTGGCTGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGACCTTGTGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp GCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGCTGCAGGTTCCTCATaGAGTCCTCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: AVGDANLQGAALPAAGGGAAGSS*SPPWSL
Trigger: AAGTGACCATGGAGGACTTCATGAGGAACCTGCAGC...CCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCATGTGCACAGTCATGTTaGGTCCTGCTCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSCAQSC*VLLPGV
Trigger: CACACCAGGGAGCAGGACTCAACATGACTGTGCACA...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGTCCGGGGTGAGCGGATaGACAGCTTGCTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAASGVSG*TACCGQ
Trigger: TTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGA...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGGCTCTGCTCCAGTGTaGCCAGTGTCCGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAGSAPV*PVSGVS
Trigger: GCTCACCCCGGACACTGGTCACACTGGAGCAGAGCC...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACCACCCACTCATGGGCTCCACGGAGATaGGGCGCCGGACCCCGCGAT +
Preference number: 4 (lower is better)
Translates to: GSRPRGSMTLLILFTTHSWAPRR*GAGPRD
Trigger: ATCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCA...TGAGTGGGTGGTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCACAGCAGCGATGTACTaGATGATGTGCTTACTGGCT +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRTAAMY*MMCLLA
Trigger: AGCCAGTAAGCACATCATGCAGTACATCGCTGCTGT...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTTGTGATTGCGGTTGGTaGGGGCATTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGCDCGW*GHCQRP
Trigger: AGGCCTTTGGCAATGCCCGCACCAACCGCAATCACA...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCTTTCACCCACGTGCTaGTTGAGGACCCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGLSPTC*LRTRDF
Trigger: GAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAG...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCTTTCTTTCACCCACGTaGTGCTTGAGGACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVFLSPT*CLRTRD
Trigger: GTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAGAAA...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGCAGCCAGGATGCGATaGACAGACTCCACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRAARMR*TDSTSS
Trigger: TGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGC...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGTCGATGTTTCCCAGGTaGAATATGGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRSMFPR*NMAARM
Trigger: CATCCTGGCTGCCATATTGCACCTGGGAAACATCGA...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGCCAGGCCCTCCTTCTaGAGCCCACCCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPARPSF*SPPSSV
Trigger: GACGGAGGAGGGTGGGCTGCAGAAGGAGGGCCTGGC...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCTACTCTTCCTGTTCCTaGTTCAGGATGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRYSSCS*FRMSWM
Trigger: CATCCAGCTCATCCTGAAGCAGGAACAGGAAGAGTA...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGAAATACTCAACGCTCTaGCAGGTGATGCCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRKYSTL*QVMPSR
Trigger: GCGCGAGGGCATCACCTGGCAGAGCGTTGAGTATTT...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGAAGCGAAGCCAGCCCTaGGGACCCTCACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRKRSQP*GPSHSP
Trigger: TGGAGAATGTGAGGGTCCGCAGGGCTGGCTTCGCTT...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GTACACTGCCTTGGCACAGGCATCCCGGGCATAGCTGGCCTCAGCTGCAGTGTGTCCCCCTGCAGCCCGTaGTGCTCCAGGAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VHCLGTGIPGIAGLSCSVSPCSP*CSRRAL
Trigger: GAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGA...CACACTGCAGCTGAGGCCAGCTATGCCCGGGATGCCTGTGCCAAGGCAGTGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGAGTGGCGGCTGCCTTaGAGCCTGGAATCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCEWRLP*SLESPL
Trigger: CAGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTC...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGTCCTGGCCGCGGGCGTaGAGCACCACCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVSWPRA*STTSWS
Trigger: AGACCAGCTGGTGGTGCTGCACGCCCGCGGCCAGGA...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWASVTA*WLCSSL
Trigger: CAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGC...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCTTCCCAGGTGCAATATaGCAGCCAGGATGCGATGCA +
Preference number: 4 (lower is better)
Translates to: VGDANLQGAALPAAGGGVFPGAI*QPGCDA
Trigger: TGCATCGCATCCTGGCTGCCATATTGCACCTGGGAA...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp AGCCTCCGGCAGCGCCACCTCGCCAAGGTGCCCCGCCATGCCTTCTGCAATAGCGGCAGAGCTGGCGGCTaGTGTAGTGTAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: SLRQRHLAKVPRHAFCNSGRAGG*CSVGDG
Trigger: GCCATCACCTACACTACACCAGCCGCCAGCTCTGCC...GCTATTGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGCGCTGCCGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGACATGGCCCGTAGAGTaGGGTCCGTGCTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRTWPVE*GPCCCT
Trigger: TGTACAACAGCACGGACCCCACTCTACGGGCCATGT...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGCTGCAGAAGAGTGCGTaGCAGGTGTCCTGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWLQKSA*QVSWKG
Trigger: GCCCTTCCAGGACACCTGCCACGCACTCTTCTGCAG...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGCTGTGGGATTGTCAGTaGCAGAGGACAGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQLWDCQ*QRTGSL
Trigger: GAGACTACCTGTCCTCTGCCACTGACAATCCCACAG...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCTGGTCTCCTCCGCTaGTCACGCTCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCAGLLR*SRSAPS
Trigger: TGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGC...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGACCACGAGGTCGTCCTaGCCGCGGGCGTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASTTRSS*PRACST
Trigger: GGTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGT...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGAACGCGGTTGTCCAATaGCGGCCGGGAGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGANAVVQ*RPGAVQ
Trigger: CTGCACCGCTCCCGGCCGCCATTGGACAACCGCGTT...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGGTTTATTTGCAGCGCTaGCGGGGCGGACAATTGGCG +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGVYLQR*RGGQLA
Trigger: CGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGCCTTCCTGTGCCTGCTaGAAGGACAGTGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRPSCAC*KDSEGE
Trigger: CTCTCCTTCACTGTCCTTCCAGCAGGCACAGGAAGG...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
3UTR CAA 72 bp AGCCCGTGCTGCTCCAGGAGAGCGCTCACGGCTGCCTaGTCGGAGCCCAGCAGGTGGTTGGGCCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: SPCCSRRALTAA*SEPSRWLGHVY
Trigger: ATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCACGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CAA 72 bp AGTGTGACCAGTGTCCGGGGTGAGCGGATGAACAGCTaGCTGTGGCCAAAGGCCACGTCCCCCTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SVTSVRGERMNS*LWPKATSPCSP
Trigger: CGGGCTGCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTCACACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGCTGCTCCCTGGTGTGTaGAATTGTATACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQLLPGV*NCIQQG
Trigger: ACCCTGCTGTATACAATTTCACACACCAGGGAGCAG...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp CCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCACTGCTCGAAACTGTTaGCGGGAAACACCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PCLPRQLCEPAGSGARGPTARNC*RETPRS
Trigger: GCTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGT...GGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCAATGGTGGCGTTGTTaGAATACTCAACGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGQWWRC*NTQRSA
Trigger: GGCAGAGCGTTGAGTATTTCAACAACGCCACCATTG...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTGGAAGATTCGGTCAGTaGTGGTGCCAGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPGRFGQ*WCQQSC
Trigger: GCAGCTCTGCTGGCACCATCACTGACCGAATCTTCC...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp ACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCCTCTGTTCTTGTCGATaGAGCCTTCCACGGAGTACG +
Preference number: 4 (lower is better)
Translates to: TVRASRERSTRSRGVAVSLCSCR*SLPRST
Trigger: CGTACTCCGTGGAAGGCTTCATCGACAAGAACAGAG...GCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGCTCTGTTCTTGTCGATaGAGCCTTCCACGGAGTACG +
Preference number: 4 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRLCSCR*SLPRST
Trigger: CGTACTCCGTGGAAGGCTTCATCGACAAGAACAGAG...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGTGTACAGCAGCCGCTTaGAGTCCTGGAAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGCTAAA*SPGRGN
Trigger: ATTTCCTCTTCCAGGACTTCAAGCGGCTGCTGTACA...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGAGAGGTGCTGGTCTGTaGGCAGGAGGGCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGRGAGL*AGGPGS
Trigger: GGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCT...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GGGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCGGCTGGAAACACCTTaGCTCACCTTCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GVWPSAQPHGPPVPPRPLRLETP*LTFLCL
Trigger: CAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCG...CAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCTTTCTTTCACCCACGTaGTGCTTGAGGACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PCLPRQLCEPAGSGARGPFLSPT*CLRTRD
Trigger: GTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAGAAA...GGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp ACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCTTTCTTTCACCCACGTaGTGCTTGAGGACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: TVRASRERSTRSRGVAVSFLSPT*CLRTRD
Trigger: GTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAGAAA...GCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCAGTCATGTTGAGTCCTaGTCCCTGGTGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: ANLQGAALPAAGGGVRAASHVES*SLVCEI
Trigger: AATTTCACACACCAGGGAGCAGGACTCAACATGACT...GGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGTGCCTCCTCGGCCACTaGCAGGCCCTCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGCLLGH*QALLLQ
Trigger: CTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCA...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGGCTCTGCTGCCTCCTCGGCCACTaGCAGGCCCTCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGLKPMTLMASVTAWWLCCLLGH*QALLLQ
Trigger: CTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCA...GCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTTGCCTCCTCGGCCACTaGCAGGCCCTCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGCLLGH*QALLLQ
Trigger: CTGCAGAAGGAGGGCCTGGCAGTGGCCGAGGAGGCA...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CAAGCAGTTCTTGTGCCTCAGCCTCCCGAGCAACTGGCATTACAGGCACGCGTCCCAGCACGGCCAGGATaGCACGGTGGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QAVLVPQPPEQLALQARVPARPG*HGGAAP
Trigger: TGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGG...GACGCGTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp TCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGGCTCTGCGAGAGCGCTCACGGCTaGCTTGTCGGAGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGLKPMTLMASVTAWWLCESAHG*LVGAQQ
Trigger: CTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTC...GCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCCCTGCAGCCCGTGCTaGTCCAGGAGAGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASPCSPC*SRRALT
Trigger: CGTGAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCTCCCCCTGCAGCCCGTaGTGCTCCAGGAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLSPCSP*CSRRAL
Trigger: GAGCGCTCTCCTGGAGCAGCACGGGCTGCAGGGGGA...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGAGGCGGGCTCGGCTCTaGTCCAGTGTGACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGARRARL*SSVTSV
Trigger: GACACTGGTCACACTGGAGCAGAGCCGAGCCCGCCT...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGTGTCCTGGAAGGGCTaGAGCACAGCAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVVSWKG*STAGGS
Trigger: GCTGCCCCCTGCTGTGCTGCAGCCCTTCCAGGACAC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTGCCGGGCCCGCCACCTaGAGAAGAGTGCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSAGPAT*RRVRGR
Trigger: CCTGCCACGCACTCTTCTGCAGGTGGCGGGCCCGGC...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGATGGCTTAGTGGGATaGAGTCGGAGACGCGAACCT +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRDGLVG*SRRREP
Trigger: AGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATC...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCCTGGTACCTGGCGATaGCCTCAGGCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCPGTWR*PQAHTG
Trigger: CCCTGTATGGGCCTGAGGCCATCGCCAGGTACCAGG...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR CCA 90 bp ACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCAGTTGTGATTGCGGTTaGTGCGGGCATTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: TVRASRERSTRSRGVAVSSCDCG*CGHCQR
Trigger: CCTTTGGCAATGCCCGCACCAACCGCAATCACAACT...GCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCACGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGARGPGV*PSAQPH
Trigger: ATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCG...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGCAGAGCTGGCGGCTaGTGTAGTGTAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGGRAGG*CSVGDG
Trigger: GCCATCACCTACACTACACCAGCCGCCAGCTCTGCC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGAGGTATGCGACCTGGTaGCGACAGTGGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGRYATW*RQWFSS
Trigger: GGATGAGAACCACTGTCGCCACCAGGTCGCATACCT...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGTCGGAGCCCAGCAGGTaGTTGGGCCATGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRSEPSR*LGHVYS
Trigger: TGAATACACATGGCCCAACCACCTGCTGGGCTCCGA...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GCTGCAGCACAGCAGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTGGCGTCGGAGCCCAGCAGGTaGTTGGGCCATGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: AAAQQGAAATQGHARRVASEPSR*LGHVYS
Trigger: TGAATACACATGGCCCAACCACCTGCTGGGCTCCGA...CGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGTGCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGATGAACAGCTTGCTGTaGCCAAAGGCCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAMNSLL*PKATSP
Trigger: GGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCAT...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGGCTGCCTTGCAGCCTaGAATCGCCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAGCLAA*NRRCSS
Trigger: TGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCC...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGTCACGCCCGTAGAGTaGCGGCTGCCTTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVVTPVE*RLPCSL
Trigger: CAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGAC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGTGGCAGGTGTCCTaGAAGGGCTGCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAAWQVS*KGCSTA
Trigger: TGCTGTGCTGCAGCCCTTCCAGGACACCTGCCACGC...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTGGTTGGGCCGGTTCCGGATCTTGTaGAAGCGGTTCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CSRRALTAALSEPSRWLGRFRIL*KRFTLR
Trigger: CCGCAAGGTGAACCGCTTCCACAAGATCCGGAACCG...GCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGCTGGTCTCCTCCGCTaGTCACGCTCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPAGLLR*SRSAPS
Trigger: TGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGC...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGCGCCGGACCCCGCGATaGCTTAGTGGGATGCAGTCG +
Preference number: 4 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGRRTPR*LSGMQS
Trigger: CGACTGCATCCCACTAAGCCATCGCGGGGTCCGGCG...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCGTTTATTTGCAGCGCTaGCGGGGCGGACAATTGGCG +
Preference number: 4 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCVYLQR*RGGQLA
Trigger: CGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp AGCTGGTCTCCTCCGCTGGTCACGCTCAGCCCCGTCACCGCCTCAAGGGGCACGTCTGGCTTGGATTGGTaGCAGCAGCGATGTACTGCA +
Preference number: 4 (lower is better)
Translates to: SWSPPLVTLSPVTASRGTSGLDW*QQRCTA
Trigger: TGCAGTACATCGCTGCTGTCACCAATCCAAGCCAGA...CGTGCCCCTTGAGGCGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCACCCACGTGCTGCTTaGGGACCCGAGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCHPRAA*GPETSP
Trigger: TGGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTG...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp CCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCCAATGGTGGCGTTGTTaGAATACTCAACGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PCLPRQLCEPAGSGARGPQWWRC*NTQRSA
Trigger: GGCAGAGCGTTGAGTATTTCAACAACGCCACCATTG...GGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTAGGTCATCTTGTACCTaGGCAGGAATCGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGRSSCT*AGIESR
Trigger: CCTACTCTCGATTCCTGCTCAGGTACAAGATGACCT...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR TCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCGGCCACCTTGGCCTTaGTCTGGGGCATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGARPPWP*SGACLK
Trigger: CTTCAGACATGCCCCAGATCAAGGCCAAGGTGGCCG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGAGGGGGCCCTTACGTaGCGTCCCCTGCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVEGALT*RPLHSA
Trigger: AGCACTATGCAGGGGACGTCACGTAAGGGCCCCCTC...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR TCA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGCGCTCCTGCCCCATaGCACATGCCATGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FSMSSLPPEATVRASRERSAPAP*HMPWCL
Trigger: CAGGCACCATGGCATGTGTCATGGGGCAGGAGCGCT...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR TCA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGCACCCACGTGCTGCTTaGGGACCCGAGACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SCSVALLYEFPASRGNCAHPRAA*GPETAH
Trigger: GTGGGCAGTCTCGGGTCCTCAAGCAGCACGTGGGTG...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGGACCGGTGCTTCATTaGCTTGTAGGCGGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAGPVLH*LVGGVG
Trigger: GCCAACGCCGCCTACAAGGCAATGAAGCACCGGTCC...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR GCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGTTGGTGCGGGCATTaGCAAAGGCCTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCGWCGH*QRPPAH
Trigger: GTGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACC...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGCTGCTTGTCCTCACTaGCTCTCAGCAATTGGTAGA +
Preference number: 4 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRAACPH*LSAIGR
Trigger: TCTACCAATTGCTGAGAGGCAGTGAGGACAAGCAGC...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR GCA 90 bp GGCTCTGGCTGCTCCGGCCTGGGCTCCACGGAGATGAGGCGCCGGACCCCGCGAAGTCATGTTGAGTCCTaGTCCCTGGTGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: GSGCSGLGSTEMRRRTPRSHVES*SLVCEI
Trigger: AATTTCACACACCAGGGAGCAGGACTCAACATGACT...TCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAGGCCGGAGCAGCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAATATGGCAGCCAGGATaGGATGCACAGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: QLCEPAGSGARGPGVWPSIWQPG*DAQTPP
Trigger: AGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATAT...TGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTGCCAGGCCCTCCTTCTaGAGCCCACCCTCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSARPSF*SPPSSV
Trigger: GACGGAGGAGGGTGGGCTGCAGAAGGAGGGCCTGGC...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGTGCATGTCCAGGGTCTaGAGGAAGATTCGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRCMSRV*RKIRSV
Trigger: CACTGACCGAATCTTCCTGCAGACCCTGGACATGCA...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCAGCAGCCCCAGGTATaGGACCTGGTGGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGQQPQV*DLVATV
Trigger: CACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTG...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGAAGCGAAGCCAGCCCTaGGGACCCTCACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRKRSQP*GPSHSP
Trigger: TGGAGAATGTGAGGGTCCGCAGGGCTGGCTTCGCTT...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCCACCTCGCCAAGGTaGCCCGCCATGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLATSPR*PAMPSA
Trigger: TGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGC...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTATGTTCTTCACCAGCTaGCGGGCCCGCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGMFFTS*RARHLQ
Trigger: CTGCAGGTGGCGGGCCCGGCAGCTGGTGAAGAACAT...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCATGTGGCGGCCGGGAGCGGTaGAGGCACACCACGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLPGGSAHHCPRHCAQSCGGRER*RHTTRS
Trigger: CGACCTCGTGGTGTGCCTGCACCGCTCCCGGCCGCC...ACATGACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGAAATCGGGCTCTGGCTaGTCCGGCCTGGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVKSGSG*SGLGST
Trigger: CGTGGAGCCCAGGCCGGAGCAGCCAGAGCCCGATTT...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGGCTCTGCCCTGGTACCTGGCGATaGCCTCAGGCCCATACAGGG +
Preference number: 4 (lower is better)
Translates to: SGLKPMTLMASVTAWWLCPGTWR*PQAHTG
Trigger: CCCTGTATGGGCCTGAGGCCATCGCCAGGTACCAGG...GCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCGCCTCAGCTGCAGTGTaGCCCTTCTCTATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCASAAV*PFSMSS
Trigger: GGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGC...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCATCCCGGGCATAGCTaGCCTCAGCTGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGHPGHS*PQLQCG
Trigger: GCCACACTGCAGCTGAGGCCAGCTATGCCCGGGATG...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GGTGGGGGTGGCAGAAGTGGCCATAACACCTGTCTCCGAGCCACTCCCCTGAAGCATCCCGGGCATAGCTaGCCTCAGCTGCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGRSGHNTCLRATPLKHPGHS*PQLQCG
Trigger: GCCACACTGCAGCTGAGGCCAGCTATGCCCGGGATG...CTTCAGGGGAGTGGCTCGGAGACAGGTGTTATGGCCACTTCTGCCACCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCCATGGTCTTGTCTGTaGGGCAGAGCTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGPWSCL*GRAGGW
Trigger: CCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGG...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCACCATGGTCTTGTCTGTaGGGCAGAGCTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGAPWSCL*GRAGGW
Trigger: CCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGG...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCTCGGCCAAACTCCATaGTCTTGTCTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAALGQTP*SCLWGR
Trigger: TCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAG...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGAGCCGCTTGAAGTCCTaGAAGAGGAAATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQSRLKS*KRKSLF
Trigger: GAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCT...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGTCACGCCCGTAGAGTaGCGGCTGCCTTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASVTPVE*RLPCSL
Trigger: CAGGCTGCAAGGCAGCCGCCACTCTACGGGCGTGAC...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AAGATTCGGTCAGTGATGGTGCCAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCTGCAGCACCACCAGCTaGTCTCCTCCGCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: KIRSVMVPAELQASSSTACSTTS*SPPLVT
Trigger: CGTGACCAGCGGAGGAGACCAGCTGGTGGTGCTGCA...GGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGACCGAATCTT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCGCCGGACCCCGCGATaGCTTAGTGGGATGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASRRTPR*LSGMQS
Trigger: CGACTGCATCCCACTAAGCCATCGCGGGGTCCGGCG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCGCTGCAGGTTCCTCATaGAGTCCTCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCAAGSS*SPPWSL
Trigger: AAGTGACCATGGAGGACTTCATGAGGAACCTGCAGC...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp CAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCACTGCTCCCTGGTGTGTaGAATTGTATACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QLCEPAGSGARGPGVWPSLLPGV*NCIQQG
Trigger: ACCCTGCTGTATACAATTTCACACACCAGGGAGCAG...TGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCCAACGCTCTGCCAGGTaGTGCCCTCGCGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLQRSAR*CPRART
Trigger: AGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTG...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGCAATGGTGGCGTTGTTaGAATACTCAACGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGQWWRC*NTQRSA
Trigger: GGCAGAGCGTTGAGTATTTCAACAACGCCACCATTG...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCCCCTGCATAGTGCTTaGTCCGGAAGTCTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAPLHSA*SGSLGQ
Trigger: TTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGTGTACAGCAGCCGCTTaGAGTCCTGGAAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGCTAAA*SPGRGN
Trigger: ATTTCCTCTTCCAGGACTTCAAGCGGCTGCTGTACA...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGAGGTCATCTTGTACCTaGGCAGGAATCGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGRSSCT*AGIESR
Trigger: CCTACTCTCGATTCCTGCTCAGGTACAAGATGACCT...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGTCCGGGGTGAGCGGATaGACAGCTTGCTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGSGVSG*TACCGQ
Trigger: TTGGCCACAGCAAGCTGTTCATCCGCTCACCCCGGA...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGACCAGTGTCCGGGGTaGGCGGATGAACAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVDQCPG*ADEQLA
Trigger: AGCAAGCTGTTCATCCGCTCACCCCGGACACTGGTC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTGCAGCTCAGCCAGGTaGGCCCGCACCTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASCSSAR*ARTLCL
Trigger: GAGACACAAGGTGCGGGCTCACCTGGCTGAGCTGCA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTCGGCCACCTTGGCCTTaGTCTGGGGCATGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPRPPWP*SGACLK
Trigger: CTTCAGACATGCCCCAGATCAAGGCCAAGGTGGCCG...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGTGTGATTGCGGTTGGTaGGGGCATTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRCDCGW*GHCQRP
Trigger: AGGCCTTTGGCAATGCCCGCACCAACCGCAATCACA...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGTTTCTTTCACCCACGTaGTGCTTGAGGACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAAFLSPT*CLRTRD
Trigger: GTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAGAAA...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGCTGTCCAAGGCACTGTaGACAGTCATGTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGLSKAL*TVMLSP
Trigger: AGGACTCAACATGACTGTGCACAGTGCCTTGGACAG...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCAGCCAGGATGCGATaGACAGACTCCACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGAARMR*TDSTSS
Trigger: TGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCACATGGTCCACCAGTaGCTCCTCGGCCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASHMVHQ*LLGHCQ
Trigger: CTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGTGCATGTCCAGGGTCTaGAGGAAGATTCGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWCMSRV*RKIRSV
Trigger: CACTGACCGAATCTTCCTGCAGACCCTGGACATGCA...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTCTGTGATGTCCTGCTaGCCGTCCGGCCACATGGCC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASSVMSC*PSGHMA
Trigger: GGCCATGTGGCCGGACGGGCAGCAGGACATCACAGA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCTCTGTGATGTCCTGCTaGCCGTCCGGCCACATGGCC +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLSVMSC*PSGHMA
Trigger: GGCCATGTGGCCGGACGGGCAGCAGGACATCACAGA...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTTGGAGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTTGAAGAGTGTGCCAAGGCCACGTCCCCCTaGAGCCCGTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGGKVLHQGHHGVLEECAKATSP*SPCCSR
Trigger: CCTGGAGCAGCACGGGCTGCAGGGGGACGTGGCCTT...GGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGATGTTCTTCACCAGCTaGCGGGCCCGCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SCSVALLYEFPASRGNCAMFFTS*RARHLQ
Trigger: CTGCAGGTGGCGGGCCCGGCAGCTGGTGAAGAACAT...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCCGCATCACCCGGTACTaGCGGTCAGGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLRITRY*RSGSSL
Trigger: CAAGCTGGACCCTGACCGGCAGTACCGGGTGATGCG...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTCGCATCACCCGGTACTaGCGGTCAGGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGRITRY*RSGSSL
Trigger: CAAGCTGGACCCTGACCGGCAGTACCGGGTGATGCG...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTTCACCTTCCTGTGCCTaGTGGAAGGACAGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLVGCSRRREPPGCGPPPSPSCA*WKDSEG
Trigger: TCCTTCACTGTCCTTCCAGCAGGCACAGGAAGGTGA...AGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGAGCATAGAGATGGGGTaGCCGCTCATAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRSIEMG*PLIELT
Trigger: CGTGAGCTCTATGAGCGGCCACCCCATCTCTATGCT...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR CCA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGAGTTGTGATTGCGGTTaGTGCGGGCATTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RFICSAGGADNWRPRGAASCDCG*CGHCQR
Trigger: CCTTTGGCAATGCCCGCACCAACCGCAATCACAACT...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVASVTA*WLCSSL
Trigger: CAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCAGCTCAGCCACATaGTCCACCAGTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGVSSAT*STSASS
Trigger: CGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGAC...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGCTGGTACACTGCCTTaGCACAGGCATCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVAGTLP*HRHPGH
Trigger: ATGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp ATGTCCAGCACGCCAATGACTGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCGCTGGTACACTGCCTTaGCACAGGCATCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: MSSTPMTVSLPSRRGSRPAGTLP*HRHPGH
Trigger: ATGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGC...GGGCCGGGATCCTCGGCGTGATGGCAAGGACACAGTCATTGGCGTGCTGGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGACATGGCCCGTAGAGTaGGGTCCGTGCTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRTWPVE*GPCCCT
Trigger: TGTACAACAGCACGGACCCCACTCTACGGGCCATGT...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp ACCCCGCGATGGCTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGACATGGCCCGTAGAGTaGGGTCCGTGCTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: TPRWLSGMQSETRTSRVRTWPVE*GPCCCT
Trigger: TGTACAACAGCACGGACCCCACTCTACGGGCCATGT...CCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATCGCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCCCAGGTATGCGACCTaGTGGCGACAGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAPRYAT*WRQWFS
Trigger: TGAGAACCACTGTCGCCACCAGGTCGCATACCTGGG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGCTGCCTTGCAGCCTaGAATCGCCGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLGCLAA*NRRCSS
Trigger: TGAGCTGCAGCGGCGATTCCAGGCTGCAAGGCAGCC...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGACCCCTGAAGACACCTaGGCTTTGGCACTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: FSMSSLPPEATVRASRERTPEDT*ALALGA
Trigger: CGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGT...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CAA 72 bp GAGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTaGAAGAGTGTGCCAGCCGTCAGGGGGCGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: EARFSTRATMEF*KSVPAVRGRLV
Trigger: GACCAAGCGCCCCCTGACGGCTGGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCCACTCTCCCCTGAGATaGCGATGCAGGTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLHSPLR*RCRCPW
Trigger: CCAGGGACACCTGCATCGTCATCTCAGGGGAGAGTG...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR TCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTGCCCCACTCTCCCCTaGGATGACGATGCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASCPTLP*DDDAGV
Trigger: GACACCTGCATCGTCATCTCAGGGGAGAGTGGGGCA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR TCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGGAAGATTCGGTCAGTaGTGGTGCCAGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGGRFGQ*WCQQSC
Trigger: GCAGCTCTGCTGGCACCATCACTGACCGAATCTTCC...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGGGAAGATTCGGTCAGTaGTGGTGCCAGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSMSSLPPEATVRASRERGRFGQ*WCQQSC
Trigger: GCAGCTCTGCTGGCACCATCACTGACCGAATCTTCC...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp TCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGGCTCTGCCCCCTGCATAGTGCTTaGTCCGGAAGTCTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SGLKPMTLMASVTAWWLCPLHSA*SGSLGQ
Trigger: TTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGG...GCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCTTCCACGGAGTACGTaGCGTCCCCTGCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGLPRST*RPLHSA
Trigger: AGCACTATGCAGGGGACGTCACGTACTCCGTGGAAG...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGAGTGTCTTTAGTCGCTaGGCAAACAGGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRSVFSR*ANRLDA
Trigger: AGCATCAAGCCTGTTTGCTCAGCGACTAAAGACACT...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCAGTGTCTTTAGTCGCTaGGCAAACAGGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: GRQLSHMVHQCLLGHCQASVFSR*ANRLDA
Trigger: AGCATCAAGCCTGTTTGCTCAGCGACTAAAGACACT...GGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTGGAAACACCTTaGCTCACCTTCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVRLETP*LTFLCL
Trigger: CAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCG...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCCTCGTCCTCCATCCTaGCGGCTGGAAACACCTTGC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASPRPPS*RLETPC
Trigger: GCAAGGTGTTTCCAGCCGGCAGGATGGAGGACGAGG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp ATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGGGACCGGTGCTTCATTaGCTTGTAGGCGGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: IRKSRPNSMVLSVGQSWRGPVLH*LVGGVG
Trigger: GCCAACGCCGCCTACAAGGCAATGAAGCACCGGTCC...CCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCTTTCACCCACGTGCTaGTTGAGGACCCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCLSPTC*LRTRDF
Trigger: GAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAG...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCCTGTCCAAGGCACTGTaGACAGTCATGTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCLSKAL*TVMLSP
Trigger: AGGACTCAACATGACTGTGCACAGTGCCTTGGACAG...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp AGCTGGTCTCCTCCGCTGGTCACGCTCAGCCCCGTCACCGCCTCAAGGGGCACGTACTCTTCCTGTTCCTaGTTCAGGATGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SWSPPLVTLSPVTASRGTYSSCS*FRMSWM
Trigger: CATCCAGCTCATCCTGAAGCAGGAACAGGAAGAGTA...CGTGCCCCTTGAGGCGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGGTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRVRDVP*IVLDPE
Trigger: TTCCGGATCAAGCACTATGCAGGGGACGTCACGTAC...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCACCTGCAGAAGAGTaGGTGGCAGGTGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVPPAEE*VAGVLE
Trigger: TTCCAGGACACCTGCCACGCACTCTTCTGCAGGTGG...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCTCCATCCTGCCGGCTaGAAACACCTTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGLHPAG*KHLASP
Trigger: AGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAG...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCCTTGTAGGCGGCGTTaGCCACAGCATAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGPCRRR*PQHRDG
Trigger: CCCATCTCTATGCTGTGGCCAACGCCGCCTACAAGG...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR CCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCTCAGCCCTCTGGCTTaGATTGGTGACAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGALSPLA*IGDSSD
Trigger: ATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCTCAGCCCTCTGGCTTaGATTGGTGACAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCLSPLA*IGDSSD
Trigger: ATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAG...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACA +
Preference number: 4 (lower is better)
Translates to: RRREPPGCGPPCGRRRGQLSPAP*CVKLYT
Trigger: TGTATACAATTTCACACACCAGGGAGCAGGACTCAA...CTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGTCGGTCACTGCCTGGTaGCTCTGCTCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVSVTAW*LCSSLS
Trigger: GGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGTCAGCTCAGCCACATaGTCCACCAGTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGVSSAT*STSASS
Trigger: CGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGAC...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CCCCTGAAGACACCTGGGCTTTGGCACTGGGAGCGTGGTCCAAGTATGGTAGCGGCTGGTACACTGCCTTaGCACAGGCATCCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLKTPGLWHWERGPSMVAAGTLP*HRHPGH
Trigger: ATGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGC...CGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CCGGTCAGGGTCCAGCTTGTAGAGGTGCTGGTCTGTGAGCAGGAGGGCCCGGTTCTCGGCCAAACTCCATaGTCTTGTCTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PVRVQLVEVLVCEQEGPVLGQTP*SCLWGR
Trigger: TCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAG...AACCGGGCCCTCCTGCTCACAGACCAGCACCTCTACAAGCTGGACCCTGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGAGCCGCTTGAAGTCCTaGAAGAGGAAATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRSRLKS*KRKSLF
Trigger: GAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCT...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp ATGTCCAGCACGCCAATGACTGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCATGAACAGCTTGCTGTaGCCAAAGGCCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: MSSTPMTVSLPSRRGSRPMNSLL*PKATSP
Trigger: GGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCAT...GGGCCGGGATCCTCGGCGTGATGGCAAGGACACAGTCATTGGCGTGCTGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTGTGGGATTGTCAGTaGCAGAGGACAGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRLWDCQ*QRTGSL
Trigger: GAGACTACCTGTCCTCTGCCACTGACAATCCCACAG...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCGGTTCCGGATCTTGTaGAAGCGGTTCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGRFRIL*KRFTLR
Trigger: CCGCAAGGTGAACCGCTTCCACAAGATCCGGAACCG...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGACTGCTCGAAACTGTTaGCGGGAAACACCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGATARNC*RETPRS
Trigger: GCTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGT...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCCAATGGTGGCGTTGTTaGAATACTCAACGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGQWWRC*NTQRSA
Trigger: GGCAGAGCGTTGAGTATTTCAACAACGCCACCATTG...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTCCCCTGCATAGTGCTTaGTCCGGAAGTCTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGPLHSA*SGSLGQ
Trigger: TTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGG...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGTGTACAGCAGCCGCTTaGAGTCCTGGAAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRCTAAA*SPGRGN
Trigger: ATTTCCTCTTCCAGGACTTCAAGCGGCTGCTGTACA...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCACCATGGAGTTCTTaGAGAGTGTGCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVPPWSS*RVCQPS
Trigger: TGACGGCTGGCACACTCTTCAAGAACTCCATGGTGG...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp AGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGGGCTCTGCTCCAGTGTaGCCAGTGTCCGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RCNMAARMRCTDSTSSGLGSAPV*PVSGVS
Trigger: GCTCACCCCGGACACTGGTCACACTGGAGCAGAGCC...CAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGCTGGAGTTGTGATTaGGGTTGGTGCGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLGWSCD*GWCGHC
Trigger: GCAATGCCCGCACCAACCGCAATCACAACTCCAGCC...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp ATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGGGCTGGAGTTGTGATTaGGGTTGGTGCGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: IRKSRPNSMVLSVGQSWRGWSCD*GWCGHC
Trigger: GCAATGCCCGCACCAACCGCAATCACAACTCCAGCC...CCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACCACCCACTCAGGCTGGAGTTGTGATTaGGGTTGGTGCGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: GSRPRGSMTLLILFTTHSGWSCD*GWCGHC
Trigger: GCAATGCCCGCACCAACCGCAATCACAACTCCAGCC...TGAGTGGGTGGTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGCAGCCAGGATGCGATaGACAGACTCCACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPAARMR*TDSTSS
Trigger: TGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGC...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTCGATGTTTCCCAGGTaGAATATGGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGSMFPR*NMAARM
Trigger: CATCCTGGCTGCCATATTGCACCTGGGAAACATCGA...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGAAATACTCAACGCTCTaGCAGGTGATGCCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVKYSTL*QVMPSR
Trigger: GCGCGAGGGCATCACCTGGCAGAGCGTTGAGTATTT...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp AAGATTCGGTCAGTGATGGTGCCAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCAAATACTCAACGCTCTaGCAGGTGATGCCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: KIRSVMVPAELQASSSTAKYSTL*QVMPSR
Trigger: GCGCGAGGGCATCACCTGGCAGAGCGTTGAGTATTT...GGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGACCGAATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCCCCGCCATGCCTTCTaGAATAGCAGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: RRFICSAGGADNWRPRGAPRHAF*NSSTMM
Trigger: CATCATTGTGCTGCTATTGCAGAAGGCATGGCGGGG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCTCAGAAGGTTTATTTaGAGCGCTGGCGGGGCGGAC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASLRRFI*SAGGAD
Trigger: GTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGCTTTCACCCACGTGCTaGTTGAGGACCCGAGACTGC +
Preference number: 4 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVLSPTC*LRTRDC
Trigger: GCAGTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAG...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCGATGCAGGTGTCCCTaGACCGGTGCTTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASRCRCP*TGASLP
Trigger: AGGCAATGAAGCACCGGTCCAGGGACACCTGCATCG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR CCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTCGGTCACTGCCTGGTaGCTCTGCTCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASSVTAW*LCSSLS
Trigger: GGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp AGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGCGAGGTCCCGGGGTGTaGCCGTCAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: RCNMAARMRCTDSTSSGLRGPGV*PSAQPH
Trigger: ATGTGGCTGAGCTGACGGCCACACCCCGGGACCTCG...CAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CCAGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACCCATGGTCTTGTCTGTaGGGCAGAGCTGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGAIWQPGCDAQTPPLQDPWSCL*GRAGGW
Trigger: CCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGG...GTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGCTCGGCCAAACTCCATaGTCTTGTCTGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSMSSLPPEATVRASRERLGQTP*SCLWGR
Trigger: TCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAG...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp GGGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGAGCCGCTTGAAGTCCTaGAAGAGGAAATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GVWPSAQPHGPPVPPRPLSRLKS*KRKSLF
Trigger: GAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCT...CAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp AAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGCCTGGGCTTTGGCACTaGGAGCGTGGTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: KSRPNSMVLSVGQSWRLVPGLWH*ERGPSM
Trigger: CATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGG...CACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTCCTTCCTGTGCCTGCTaGAAGGACAGTGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPPSCAC*KDSEGE
Trigger: CTCTCCTTCACTGTCCTTCCAGCAGGCACAGGAAGG...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGGCTCTGCCTGGTCTCGAACTCTTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: SGLKPMTLMASVTAWWLCLVSNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGCCAAGAGTTCGAGACCAG...GCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CAA 72 bp CGGTGGGGCCGCTCCACCAGATCCACAATGGTGGCGTaGTTGAAATACTCAACGCTCTGCCAGGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: RWGRSTRSTMVA*LKYSTLCQVMP
Trigger: GGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGATCTGGTGGAGCGGCCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CAA 72 bp GCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTGGTaGGGCCATGTGTATTCACAGGTCATCTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: ALTAALSEPSRW*GHVYSQVILYL
Trigger: CAGGTACAAGATGACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
3UTR CAA 72 bp TGCTGGTCTGTGAGCAGGAGGGCCCGGTTCCGGATCTaGTGGAAGCGGTTCACCTTGCGGACATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: CWSVSRRARFRI*WKRFTLRTWLE
Trigger: TTCAAGCCATGTCCGCAAGGTGAACCGCTTCCACAAGATCCGGAACCGGGCCCTCCTGCTCACAGACCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCTGCAGGTTCCTCATaGAGTCCTCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGAAGSS*SPPWSL
Trigger: AAGTGACCATGGAGGACTTCATGAGGAACCTGCAGC...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCAGCTGCAGGTTCCTCATaGAGTCCTCCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGAAAGSS*SPPWSL
Trigger: AAGTGACCATGGAGGACTTCATGAGGAACCTGCAGC...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp CTTGGAGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTTGAAGAGTGTGCCCACCCACGTGCTGCTTaGGGACCCGAGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGGKVLHQGHHGVLEECAHPRAA*GPETSP
Trigger: TGGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTG...GGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTGTGCACAGTCATGTTaGGTCCTGCTCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASCAQSC*VLLPGV
Trigger: CACACCAGGGAGCAGGACTCAACATGACTGTGCACA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TCCACCTCTTCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGTGCACAGTCATGTTaGGTCCTGCTCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: STSSGLKPMTLMASVTAWCAQSC*VLLPGV
Trigger: CACACCAGGGAGCAGGACTCAACATGACTGTGCACA...CCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGAAGAGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCTCTGTTCTTGTCGATaGAGCCTTCCACGGAGTACG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGLCSCR*SLPRST
Trigger: CGTACTCCGTGGAAGGCTTCATCGACAAGAACAGAG...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGCCACCATGGAGTTCTTaGAGAGTGTGCCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVPPWSS*RVCQPS
Trigger: TGACGGCTGGCACACTCTTCAAGAACTCCATGGTGG...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp AGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGTGCAGCTCAGCCAGGTaGGCCCGCACCTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RCNMAARMRCTDSTSSGLCSSAR*ARTLCL
Trigger: GAGACACAAGGTGCGGGCTCACCTGGCTGAGCTGCA...CAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp AAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTGTGATTGCGGTTGGTaGGGGCATTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KSRPNSMVLSVGQSWRLVCDCGW*GHCQRP
Trigger: AGGCCTTTGGCAATGCCCGCACCAACCGCAATCACA...CACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCTTTCACCCACGTGCTaGTTGAGGACCCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASLSPTC*LRTRDF
Trigger: GAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGAAAG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCTGCTTGTCCTCACTaGCTCTCAGCAATTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCAACPH*LSAIGR
Trigger: TCTACCAATTGCTGAGAGGCAGTGAGGACAAGCAGC...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp AAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGGCAGCCAGGATGCGATaGACAGACTCCACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KSRPNSMVLSVGQSWRLVAARMR*TDSTSS
Trigger: TGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGC...CACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTATATGGCAGCCAGGATaGGATGCACAGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGIWQPG*DAQTPP
Trigger: AGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATAT...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp GTACACTGCCTTGGCACAGGCATCCCGGGCATAGCTGGCCTCAGCTGCAGTGTGGTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: VHCLGTGIPGIAGLSCSVVRDVP*IVLDPE
Trigger: TTCCGGATCAAGCACTATGCAGGGGACGTCACGTAC...CACACTGCAGCTGAGGCCAGCTATGCCCGGGATGCCTGTGCCAAGGCAGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCACCCCGCCATGCCTTCTaGAATAGCAGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGAPRHAF*NSSTMM
Trigger: CATCATTGTGCTGCTATTGCAGAAGGCATGGCGGGG...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCTCAGAAGGTTTATTTaGAGCGCTGGCGGGGCGGAC +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSLRRFI*SAGGAD
Trigger: GTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp ATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGGCTGGAGTGCAGTGGTaGGATCTCAGTTCGCCACAA +
Preference number: 4 (lower is better)
Translates to: IRKSRPNSMVLSVGQSWRAGVQW*DLSSPQ
Trigger: TTGTGGCGAACTGAGATCGCACCACTGCACTCCAGC...CCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCGATGCAGGTGTCCCTaGACCGGTGCTTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSRCRCP*TGASLP
Trigger: AGGCAATGAAGCACCGGTCCAGGGACACCTGCATCG...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp ATGTCCAGCACGCCAATGACTGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCAGTTGTGATTGCGGTTaGTGCGGGCATTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: MSSTPMTVSLPSRRGSRPSCDCG*CGHCQR
Trigger: CCTTTGGCAATGCCCGCACCAACCGCAATCACAACT...GGGCCGGGATCCTCGGCGTGATGGCAAGGACACAGTCATTGGCGTGCTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTTCGGTCACTGCCTGGTaGCTCTGCTCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSSVTAW*LCSSLS
Trigger: GGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTTCCCAGGTGCAATATaGCAGCCAGGATGCGATGCA +
Preference number: 4 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGFPGAI*QPGCDA
Trigger: TGCATCGCATCCTGGCTGCCATATTGCACCTGGGAA...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTTTCCCAGGTGCAATATaGCAGCCAGGATGCGATGCA +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPFPGAI*QPGCDA
Trigger: TGCATCGCATCCTGGCTGCCATATTGCACCTGGGAA...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCCTCAGCTGCAGTGTaGCCCTTCTCTATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLASAAV*PFSMSS
Trigger: GGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGC...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp ATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACGCCTCAGCTGCAGTGTaGCCCTTCTCTATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ITPRIPAPGFHDTVDPVHASAAV*PFSMSS
Trigger: GGAACTCATAGAGAAGGGCCACACTGCAGCTGAGGC...GTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGACCTGGTGGCGACAGTaGTTCTCATCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASTWWRQ*FSSSFP
Trigger: TGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGT...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTCTGGCTTGGATTGGTaGCAGCAGCGATGTACTGCA +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASSGLDW*QQRCTA
Trigger: TGCAGTACATCGCTGCTGTCACCAATCCAAGCCAGA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGCTGCTCCCTGGTGTGTaGAATTGTATACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGLLPGV*NCIQQG
Trigger: ACCCTGCTGTATACAATTTCACACACCAGGGAGCAG...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTAGGTCATCTTGTACCTaGGCAGGAATCGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVRSSCT*AGIESR
Trigger: CCTACTCTCGATTCCTGCTCAGGTACAAGATGACCT...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCTGAGCAAACAGGCTTaGTGCTGTGGGATTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGLSKQA*CCGIVS
Trigger: ACTGACAATCCCACAGCATCAAGCCTGTTTGCTCAG...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR TCA 90 bp TCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGTGGCTCTGCCTGAGCAAACAGGCTTaGTGCTGTGGGATTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SGLKPMTLMASVTAWWLCLSKQA*CCGIVS
Trigger: ACTGACAATCCCACAGCATCAAGCCTGTTTGCTCAG...GCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCACAAAGTCAGGTTTaGCATACTCAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGAQSQV*HTQGLP
Trigger: AGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGC...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGCACAAAGTCAGGTTTaGCATACTCAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAITPRIPAPGFHDTVDPAQSQV*HTQGLP
Trigger: AGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGC...AGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTTTCTCGAACCTGAGCTaGAGGTTCCTCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LRRFICSAGGADNWRPRGFSNLS*RFLMKS
Trigger: GGACTTCATGAGGAACCTGCAGCTCAGGTTCGAGAA...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR GCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCATTCTCGAACCTGAGCTaGAGGTTCCTCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGAFSNLS*RFLMKS
Trigger: GGACTTCATGAGGAACCTGCAGCTCAGGTTCGAGAA...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp ATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGTGCATGTCCAGGGTCTaGAGGAAGATTCGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: IRKSRPNSMVLSVGQSWRCMSRV*RKIRSV
Trigger: CACTGACCGAATCTTCCTGCAGACCCTGGACATGCA...CCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGGAAGCGGTTCACCTTaGGGACATGGCTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGGSGSP*GHGLKR
Trigger: TCTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCC...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCAGGAAGCGGTTCACCTTaGGGACATGGCTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGAGSGSP*GHGLKR
Trigger: TCTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCC...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp CGTAGAGTGGGGTCCGTGCTGTTGTACAGCAGCCGCTTGAAGTCCTGGAAGAGGGATGGCTTAGTGGGATaGAGTCGGAGACGCGAACCT +
Preference number: 4 (lower is better)
Translates to: RRVGSVLLYSSRLKSWKRDGLVG*SRRREP
Trigger: AGGTTCGCGTCTCCGACTGCATCCCACTAAGCCATC...CCTCTTCCAGGACTTCAAGCGGCTGCTGTACAACAGCACGGACCCCACTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp CCAGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACCTCCATCCTGCCGGCTaGAAACACCTTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: PGAIWQPGCDAQTPPLQDLHPAG*KHLASP
Trigger: AGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAG...GTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CAAGCAGTTCTTGTGCCTCAGCCTCCCGAGCAACTGGCATTACAGGCACGCGTCCTCAGCCCTCTGGCTTaGATTGGTGACAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: QAVLVPQPPEQLALQARVLSPLA*IGDSSD
Trigger: ATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAG...GACGCGTGCCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACA +
Preference number: 4 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCLSPAP*CVKLYT
Trigger: TGTATACAATTTCACACACCAGGGAGCAGGACTCAA...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CCCCTGAAGACACCTGGGCTTTGGCACTGGGAGCGTGGTCCAAGTATGGTAGCGTTCCCAGGTGCAATATaGCAGCCAGGATGCGATGCA +
Preference number: 4 (lower is better)
Translates to: PLKTPGLWHWERGPSMVAFPGAI*QPGCDA
Trigger: TGCATCGCATCCTGGCTGCCATATTGCACCTGGGAA...CGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTACCTGGTGGCGACAGTaGTTCTCATCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSTWWRQ*FSSSFP
Trigger: TGGGAAGCTGGATGAGAACCACTGTCGCCACCAGGT...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp TCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCAGGTATGCGACCTGGTaGCGACAGTGGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SVTAWWLCSSLSKALCTVRYATW*RQWFSS
Trigger: GGATGAGAACCACTGTCGCCACCAGGTCGCATACCT...GACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp TCCACCTCTTCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGCTGTGGGATTGTCAGTaGCAGAGGACAGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: STSSGLKPMTLMASVTAWLWDCQ*QRTGSL
Trigger: GAGACTACCTGTCCTCTGCCACTGACAATCCCACAG...CCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGAAGAGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTAGTGTCTTAAAGGGGTaGGGGTGGCAGAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGHCLVALLITVQGTVHSSVLKG*GWQKWP
Trigger: TGGCCACTTCTGCCACCCCCACCCCTTTAAGACACT...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CAA 72 bp TGGGGCCGCTCCACCAGATCCACAATGGTGGCGTTGTaGAAATACTCAACGCTCTGCCAGGTGATGCCCTCG +
Preference number: 4 (lower is better)
Translates to: WGRSTRSTMVAL*KYSTLCQVMPS
Trigger: CGAGGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGATCTGGTGGAGCGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGCTGCTCCCTGGTGTGTaGAATTGTATACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SCSVALLYEFPASRGNCALLPGV*NCIQQG
Trigger: ACCCTGCTGTATACAATTTCACACACCAGGGAGCAG...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp CCAGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGTGCACAGTCATGTTaGGTCCTGCTCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGAIWQPGCDAQTPPLQDCAQSC*VLLPGV
Trigger: CACACCAGGGAGCAGGACTCAACATGACTGTGCACA...GTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp CAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGAAGCCCTTCCACGGAGTACGTaGCGTCCCCTGCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: QYGSQDAMHRLHLFRTEALPRST*RPLHSA
Trigger: AGCACTATGCAGGGGACGTCACGTACTCCGTGGAAG...GGCTTCAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTACAGCAGCGATGTACTaGATGATGTGCTTACTGGCT +
Preference number: 4 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVTAAMY*MMCLLA
Trigger: AGCCAGTAAGCACATCATGCAGTACATCGCTGCTGT...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGACAGCAGCGATGTACTaGATGATGTGCTTACTGGCT +
Preference number: 4 (lower is better)
Translates to: FSMSSLPPEATVRASRERTAAMY*MMCLLA
Trigger: AGCCAGTAAGCACATCATGCAGTACATCGCTGCTGT...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGTGTGATTGCGGTTGGTaGGGGCATTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LDPEVSAKLHGLVCGAELCDCGW*GHCQRP
Trigger: AGGCCTTTGGCAATGCCCGCACCAACCGCAATCACA...CAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp TCCACCTCTTCAGGACTGAAGCCGATGACCCTCATGGCCTCGGTCACTGCCTGGGCTGCTTGTCCTCACTaGCTCTCAGCAATTGGTAGA +
Preference number: 4 (lower is better)
Translates to: STSSGLKPMTLMASVTAWAACPH*LSAIGR
Trigger: TCTACCAATTGCTGAGAGGCAGTGAGGACAAGCAGC...CCAGGCAGTGACCGAGGCCATGAGGGTCATCGGCTTCAGTCCTGAAGAGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp ATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACTCGATGTTTCCCAGGTaGAATATGGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ITPRIPAPGFHDTVDPVHSMFPR*NMAARM
Trigger: CATCCTGGCTGCCATATTGCACCTGGGAAACATCGA...GTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp AGCTGCAGTGTGGCCCTTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGTCGATGTTTCCCAGGTaGAATATGGCAGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SCSVALLYEFPASRGNCASMFPR*NMAARM
Trigger: CATCCTGGCTGCCATATTGCACCTGGGAAACATCGA...CGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGTACTCTTCCTGTTCCTaGTTCAGGATGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGYSSCS*FRMSWM
Trigger: CATCCAGCTCATCCTGAAGCAGGAACAGGAAGAGTA...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTTACGTGACGTCCCCTaGATAGTGCTTGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVLRDVP*IVLDPE
Trigger: TTCCGGATCAAGCACTATGCAGGGGACGTCACGTAA...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CAA 72 bp TCGCCACAACCTCTACCTCCCAGGTTCAAGCAGTTCTaGTGCCTCAGCCTCCCGAGCAACTGGCATTACAGG +
Preference number: 4 (lower is better)
Translates to: SPQPLPPRFKQF*CLSLPSNWHYR
Trigger: CCTGTAATGCCAGTTGCTCGGGAGGCTGAGGCACAAGAACTGCTTGAACCTGGGAGGTAGAGGTTGTGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGACAGCAGCGATGTACTaGATGATGTGCTTACTGGCT +
Preference number: 4 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASTAAMY*MMCLLA
Trigger: AGCCAGTAAGCACATCATGCAGTACATCGCTGCTGT...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp ATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACTACTCTTCCTGTTCCTaGTTCAGGATGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ITPRIPAPGFHDTVDPVHYSSCS*FRMSWM
Trigger: CATCCAGCTCATCCTGAAGCAGGAACAGGAAGAGTA...GTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGTCCTCCATGGTCACTTaGTCCAAAAGCACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVSSMVT*SKSTKS
Trigger: TGACTTTGTGCTTTTGGACCAAGTGACCATGGAGGA...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACA +
Preference number: 4 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCLSPAP*CVKLYT
Trigger: TGTATACAATTTCACACACCAGGGAGCAGGACTCAA...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CCA 90 bp ATCCACAATGGTGGCGTTGTTGAAATACTCAACGCTCTGCCAGGTGATGCCCTCGGCAGAGCTGGCGGCTaGTGTAGTGTAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: IHNGGVVEILNALPGDALGRAGG*CSVGDG
Trigger: GCCATCACCTACACTACACCAGCCGCCAGCTCTGCC...GAGGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp GACGTCCCCTGCATAGTGCTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTCCTTCCTGTGCCTGCTaGAAGGACAGTGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: DVPCIVLDPEVSAKLHGLPSCAC*KDSEGE
Trigger: CTCTCCTTCACTGTCCTTCCAGCAGGCACAGGAAGG...AAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
3UTR CAA 72 bp ATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTaGGCACTGGGAGCGTGGTCCAAGTATGGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: IAIMTTPEDTWA*ALGAWSKYGSE
Trigger: CTCGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR TCA 90 bp CAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGAAGCCCCTGCTCTTCACTTGTaGATCTGCTGTCCGGCATGT +
Preference number: 4 (lower is better)
Translates to: QYGSQDAMHRLHLFRTEAPALHL*ICCPAC
Trigger: ACATGCCGGACAGCAGATTCACAAGTGAAGAGCAGG...GGCTTCAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCAGTCATGTTGAGTCCTaGTCCCTGGTGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLSHVES*SLVCEI
Trigger: AATTTCACACACCAGGGAGCAGGACTCAACATGACT...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR GCA 90 bp CCCCTGAAGACACCTGGGCTTTGGCACTGGGAGCGTGGTCCAAGTATGGTAGCGAGTCATGTTGAGTCCTaGTCCCTGGTGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: PLKTPGLWHWERGPSMVASHVES*SLVCEI
Trigger: AATTTCACACACCAGGGAGCAGGACTCAACATGACT...CGCTACCATACTTGGACCACGCTCCCAGTGCCAAAGCCCAGGTGTCTTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp TTGAGTCCTGCTCCCTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGCAGCAGCCCCAGGTATaGGACCTGGTGGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSPAPWCVKLYTAGFLSKQQPQV*DLVATV
Trigger: CACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTG...CTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGCAGGACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TTGAGTCCTGCTCCCTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGAGGCGGGCTCGGCTCTaGTCCAGTGTGACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSPAPWCVKLYTAGFLSKRRARL*SSVTSV
Trigger: GACACTGGTCACACTGGAGCAGAGCCGAGCCCGCCT...CTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGCAGGACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR GCA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAGGCACGCGTCATCGTaGCCGGATAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: FSMSSLPPEATVRASRERRHASS*PDNFYI
Trigger: AATATAAAAATTATCCGGGCACGATGACGCGTGCCT...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CCACTATCCTCAAACCCTGTTTCCTGCTCTTCACTTGTGAATCTGCTGTCCGGCCTCCATCCTGCCGGCTaGAAACACCTTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: PLSSNPVSCSSLVNLLSGLHPAG*KHLASP
Trigger: AGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAG...GCCGGACAGCAGATTCACAAGTGAAGAGCAGGAAACAGGGTTTGAGGATAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp GTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGTTCATGCAGCTGCTTGAACGCGGTTGTCCAATaGCGGCCGGGAGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VKLYTAGFLSKCSSCSCLNAVVQ*RPGAVQ
Trigger: CTGCACCGCTCCCGGCCGCCATTGGACAACCGCGTT...CAAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR TCA 90 bp TTTAAAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGCAACGCTCTGCCAGGTaGTGCCCTCGCGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: FKGSQKNAAMVNHYPQTLQRSAR*CPRART
Trigger: AGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTG...CAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR TCA 90 bp ATCCACAATGGTGGCGTTGTTGAAATACTCAACGCTCTGCCAGGTGATGCCCTCACTGCTCGAAACTGTTaGCGGGAAACACCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: IHNGGVVEILNALPGDALTARNC*RETPRS
Trigger: GCTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGT...GAGGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTTGGGTTGGTGCGGGCATTaGCAAAGGCCTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: ATHKLIAIMTTPEDTWALGWCGH*QRPPAH
Trigger: GTGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACC...CAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp GCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTTTCCTGAGCATAGAGATGGGGTaGCCGCTCATAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: APRRMQPWLTTILKPCFLSIEMG*PLIELT
Trigger: CGTGAGCTCTATGAGCGGCCACCCCATCTCTATGCT...CAGGAAACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp GTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGTTCATGCAGCTGCTTGGCCTCGGTCACTGCCTaGTGGCTCTGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: VKLYTAGFLSKCSSCSCLASVTA*WLCSSL
Trigger: CAGTGATGAGCAGAGCCACCAGGCAGTGACCGAGGC...CAAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CCA 90 bp CTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGCACCTTAAATCGTTTTaGGATGCGGCAAGCAACACA +
Preference number: 4 (lower is better)
Translates to: LDPEVSAKLHGLVCGAELHLKSF*DAASNT
Trigger: TGTGTTGCTTGCCGCATCCCAAAACGATTTAAGGTG...CAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp GTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGTTCATGCAGCTGCTTGCCACCTGCAGAAGAGTaGGTGGCAGGTGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VKLYTAGFLSKCSSCSCLPPAEE*VAGVLE
Trigger: TTCCAGGACACCTGCCACGCACTCTTCTGCAGGTGG...CAAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CCA 90 bp TTAAAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTCCTTGTAGGCGGCGTTaGCCACAGCATAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LKAPRRMQPWLTTILKPCPCRRR*PQHRDG
Trigger: CCCATCTCTATGCTGTGGCCAACGCCGCCTACAAGG...ACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CCA 90 bp CTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGTTGAGTCCTGCTCCCTaGTGTGTGAAATTGTATACA +
Preference number: 4 (lower is better)
Translates to: LDPEVSAKLHGLVCGAELLSPAP*CVKLYT
Trigger: TGTATACAATTTCACACACCAGGGAGCAGGACTCAA...CAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTTGCATCATGACAACCCCTaGAGACACCTGGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ATHKLIAIMTTPEDTWALHHDNP*RHLGFG
Trigger: GCCAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATG...CAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp ACCTTAAATCGTTTTGGGATGCGGCAAGCAACACATAAGTTAATAGCCATCATGCACATGGTCCACCAGTaGCTCCTCGGCCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLNRFGMRQATHKLIAIMHMVHQ*LLGHCQ
Trigger: CTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTG...CATGATGGCTATTAACTTATGTGTTGCTTGCCGCATCCCAAAACGATTTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp TTTAAAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGAAATACTCAACGCTCTaGCAGGTGATGCCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: FKGSQKNAAMVNHYPQTLKYSTL*QVMPSR
Trigger: GCGCGAGGGCATCACCTGGCAGAGCGTTGAGTATTT...CAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp ACCTTAAATCGTTTTGGGATGCGGCAAGCAACACATAAGTTAATAGCCATCATGCCCCCACCCCACAGATaGTGGTATAGGGTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLNRFGMRQATHKLIAIMPPPHR*WYRVGP
Trigger: GGGCCCAACCCTATACCAGCATCTGTGGGGTGGGGG...CATGATGGCTATTAACTTATGTGTTGCTTGCCGCATCCCAAAACGATTTAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTTGATATGGCAGCCAGGATaGGATGCACAGACTCCACCT +
Preference number: 4 (lower is better)
Translates to: ATHKLIAIMTTPEDTWALIWQPG*DAQTPP
Trigger: AGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATAT...CAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp TTTAAAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTCACCTTCCTGTGCCTaGTGGAAGGACAGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: FKGSQKNAAMVNHYPQTLSPSCA*WKDSEG
Trigger: TCCTTCACTGTCCTTCCAGCAGGCACAGGAAGGTGA...CAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
3UTR CAA 72 bp TGCTCATCACTGTCCAAGGCACTGTGCACAGTCATGTaGAGTCCTGCTCCCTGGTGTGTGAAATTGTATACA +
Preference number: 4 (lower is better)
Translates to: CSSLSKALCTVM*SPAPWCVKLYT
Trigger: TGTATACAATTTCACACACCAGGGAGCAGGACTCAACATGACTGTGCACAGTGCCTTGGACAGTGATGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTTGGCACAAAGTCAGGTTTaGCATACTCAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ATHKLIAIMTTPEDTWALAQSQV*HTQGLP
Trigger: AGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGC...CAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR GCA 90 bp CTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGTTCATGCAGGCTGCTTGTCCTCACTaGCTCTCAGCAATTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LVCEIVYSRVSLQVQFMQAACPH*LSAIGR
Trigger: TCTACCAATTGCTGAGAGGCAGTGAGGACAAGCAGC...CTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR GCA 90 bp CTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGTTCATGCAGCTGTCCAAGGCACTGTaGACAGTCATGTTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LVCEIVYSRVSLQVQFMQLSKAL*TVMLSP
Trigger: AGGACTCAACATGACTGTGCACAGTGCCTTGGACAG...CTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR TCA 90 bp GTAGATGATATTGGGCTGCTTTGTTGTCATCATCTATTCTATTCCCTCTCCTTGTCTGGCTTGGATTGGTaGCAGCAGCGATGTACTGCA +
Preference number: 4 (lower is better)
Translates to: VDDIGLLCCHHLFYSLSLSGLDW*QQRCTA
Trigger: TGCAGTACATCGCTGCTGTCACCAATCCAAGCCAGA...CAAGGAGAGGGAATAGAATAGATGATGACAACAAAGCAGCCCAATATCATCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR TCA 90 bp TTGAGTCCTGCTCCCTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGCTTGAGAAGTTCTCATaGAACACTTATACCTTGATG +
Preference number: 4 (lower is better)
Translates to: LSPAPWCVKLYTAGFLSKLEKFS*NTYTLM
Trigger: CATCAAGGTATAAGTGTTTCATGAGAACTTCTCAAG...CTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGCAGGACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CAA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCACCCATGGCGGCCACCTaGGCCTTGATCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAPMAAT*ALIWGM
Trigger: CATGCCCCAGATCAAGGCCAAGGTGGCCGCCATGGG...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS CCA 90 bp CGTCCTGGCCGCGGGCGTGCAGCACCACCAGCTGGTCTCCTCCGCTaGTCACGCTCAGCCCCGTCACCTGAGCGGAGCGCGGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: RPGRGRAAPPAGLLR*SRSAPSPERSAGSE
Trigger: CTCTGACCCCGCGCTCCGCTCAGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCTGGTGGTGCTGCACGCCCGCGGCCAGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS-3UTR CAA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGGCGCTCACGGCTGCCTaGTCGGAGCCCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGALTAA*SEPSRW
Trigger: CCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGC...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCCTGACGAAGCCCTaGCAGGGCCCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: AVGDANLQGAALPAAGGGVLTKP*QGPHGG
Trigger: GCCGCCATGGGGGCCCTGCAAGGGCTTCGTCAGGAC...CCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCCCGGCTGGAAACACCTaGCCTCACCTTCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGPAGNT*PHLPVP
Trigger: AGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGG...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCATGGACCGGTGCTTCATaGCCTTGTAGGCGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAWTGAS*PCRRRW
Trigger: CCAACGCCGCCTACAAGGCAATGAAGCACCGGTCCA...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCCGGTTGGTGCGGGCATaGCCAAAGGCCTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRRLVRA*PKASST
Trigger: TGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACCG...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCGTGGGGTCCGTGCTGTaGTACAGCAGCCGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGVGSVL*YSSRLK
Trigger: CTTCAAGCGGCTGCTGTACAACAGCACGGACCCCAC...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS TCA 90 bp ACCACCAGCTGGTCTCCTCCGCTGGTCACGCTCAGCCCCGTCACCTaGGCGGAGCGCGGGGTCAGAGTGCAGCCGCCTCAACCCGCACCC +
Preference number: 5 (lower is better)
Translates to: TTSWSPPLVTLSPVT*AERGVRVQPPQPAP
Trigger: GGGTGCGGGTTGAGGCGGCTGCACTCTGACCCCGCGCTCCGCTCAGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCTGGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS-3UTR CAA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGAGAGTGGCGGCTGCCTaGCAGCCTGGAATCGCCGCT +
Preference number: 5 (lower is better)
Translates to: GDANLQGAALPAAGGGVRRVAAA*QPGIAA
Trigger: AGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCT...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GCTGCAGCACAGCAGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTGGCGGTCCTGACGAAGCCCTaGCAGGGCCCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: AAAQQGAAATQGHARRVAVLTKP*QGPHGG
Trigger: GCCGCCATGGGGGCCCTGCAAGGGCTTCGTCAGGAC...CGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGTGCTGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTAGCTCCCCAACGCGGTaGTCCAATGGCGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGSSPTR*SNGGRE
Trigger: CTCCCGGCCGCCATTGGACAACCGCGTTGGGGAGCT...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTGGCGGGGCGGACAATaGGCGGCCTCGGGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGWRGGQ*AASGCG
Trigger: GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCA...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGCGCTGGTACACTGCCTaGGCACAGGCATCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRRWYTA*AQASRA
Trigger: TGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGCG...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp ACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCCCAAACTCCATGGTCTaGTCTGTGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TSRVRPSLRQEEGSGRPRPNSMV*SVGQSW
Trigger: CCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGG...GCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp CGTCCAGCACGGCCAGGATGCCACGGTGGGGCCGCTCCACCAGATCCACAATGGGCGCTCACGGCTGCCTaGTCGGAGCCCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RPARPGCHGGAAPPDPQWALTAA*SEPSRW
Trigger: CCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGC...CCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGCATCCTGGCCGTGCTGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGTTGAGCAGCACGTCCTaGACCCTCTCCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GDANLQGAALPAAGGGVRLSSTS*TLSTSA
Trigger: GGCTGAGGTGGAGAGGGTCAAGGACGTGCTGCTCAA...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGAGCACACAGGTGGACTaGAGCAGCACGTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: NLQGAALPAAGGGVRAATSTQVD*SSTSLT
Trigger: GGTCAAGGACGTGCTGCTCAAGTCCACCTGTGTGCT...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp CAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCACCCACGTGCTGCTaGAGGACCCGAGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: QSETRTSRVRPSLRQEEGSPTCC*RTRDFS
Trigger: GGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGA...CCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCAATGACTGTGTCCTaGCCATCACGCCGAGGATCC +
Preference number: 5 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRPMTVS*PSRRGS
Trigger: GGATCCTCGGCGTGATGGCAAGGACACAGTCATTGG...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GGCTCTGGCTGCTCCGGCCTGGGCTCCACGGAGATGAGGCGCCGGACCCCGCGAGAGCCCAGCAGGTGGTaGGGCCATGTGTATTCACAG +
Preference number: 5 (lower is better)
Translates to: GSGCSGLGSTEMRRRTPREPSRW*GHVYSQ
Trigger: CTGTGAATACACATGGCCCAACCACCTGCTGGGCTC...TCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAGGCCGGAGCAGCCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCGCTCACGGCTGCCTaGTCGGAGCCCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGALTAA*SEPSRW
Trigger: CCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GCTGCAGCACAGCAGGGGGCAGCGGCCACACAAGGTCACGCCCGTAGAGTGGCGCCCATGGCGGCCACCTaGGCCTTGATCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: AAAQQGAAATQGHARRVAPMAAT*ALIWGM
Trigger: CATGCCCCAGATCAAGGCCAAGGTGGCCGCCATGGG...CGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGTGCTGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp GGGTCAGGGCGGCCACGCGGCCGGGGCTTCGTGCCCGCTACCGCCCAGCCTGCATGGAAGCGGTTCACCTaGCGGACATGGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: GSGRPRGRGFVPATAQPAWKRFT*RTWLEK
Trigger: CTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCCA...TGCAGGCTGGGCGGTAGCGGGCACGAAGCCCCGGCCGCGTGGCCGCCCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCGTCCTCCATGGTCACTaGGTCCAAAAGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGVLHGH*VQKHKV
Trigger: GACTTTGTGCTTTTGGACCAAGTGACCATGGAGGAC...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGCGGTTGGTGCGGGCATaGCCAAAGGCCTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGRLVRA*PKASST
Trigger: TGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACCG...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCGCCACCATGGAGTTCTaGAAGAGTGTGCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: VGDANLQGAALPAAGGGVATMEF*KSVPAV
Trigger: GACGGCTGGCACACTCTTCAAGAACTCCATGGTGGC...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCTTGATGCTGTGGGATaGTCAGTGGCAGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: NLQGAALPAAGGGVRAATLDAVG*SVAEDR
Trigger: CCTGTCCTCTGCCACTGACAATCCCACAGCATCAAG...CGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTGCCCGGTTCCGGATCTaGTGGAAGCGGTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGARFRI*WKRFTL
Trigger: CAAGGTGAACCGCTTCCACAAGATCCGGAACCGGGC...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGAGCTCCCCAACGCGGTaGTCCAATGGCGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRSSPTR*SNGGRE
Trigger: CTCCCGGCCGCCATTGGACAACCGCGTTGGGGAGCT...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGCCCTCTGGCTTGGATaGGTGACAGCAGCGATGTAC +
Preference number: 5 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSALWLG*VTAAMY
Trigger: GTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGC...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGAGTTCATGCAGCTGCTaGTCCTCACTGCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: AVGDANLQGAALPAAGGGSSCSC*SSLPLS
Trigger: GCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACT...CCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCTGTGCACAGTCATGTaGAGTCCTGCTCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGLCTVM*SPAPWC
Trigger: ACACCAGGGAGCAGGACTCAACATGACTGTGCACAG...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp TCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGCCACGCGGCACAATGGTGGCGTTGTaGAAATACTCAACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SRVRPSLRQEEGSGRPRGTMVAL*KYSTLC
Trigger: GCAGAGCGTTGAGTATTTCAACAACGCCACCATTGT...GCCGCGTGGCCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTGAGCCCAGCAGGTGGTaGGGCCATGTGTATTCACAG +
Preference number: 5 (lower is better)
Translates to: SRRREPPGCGPPCGRRRGEPSRW*GHVYSQ
Trigger: CTGTGAATACACATGGCCCAACCACCTGCTGGGCTC...ACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCCCCATGGCGGCCACCTaGGCCTTGATCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGPMAAT*ALIWGM
Trigger: CATGCCCCAGATCAAGGCCAAGGTGGCCGCCATGGG...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CGTAGAGTGGGGTCCGTGCTGTTGTACAGCAGCCGCTTGAAGTCCTGGAAGAGGTGGCGGGGCGGACAATaGGCGGCCTCGGGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: RRVGSVLLYSSRLKSWKRWRGGQ*AASGCG
Trigger: GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCA...CCTCTTCCAGGACTTCAAGCGGCTGCTGTACAACAGCACGGACCCCACTCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp CTTAGTGGGATGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCCCTGGCCGGCTGGAAACACCTaGCCTCACCTTCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: LSGMQSETRTSRVRPSPWPAGNT*PHLPVP
Trigger: AGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGG...CCAGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCATCCCACTAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp CAACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAAGCACACAGGTGGACTaGAGCAGCACGTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: QLCEPAGSGARGPGVWPSSTQVD*SSTSLT
Trigger: GGTCAAGGACGTGCTGCTCAAGTCCACCTGTGTGCT...TGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp GGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCATGTCCAGGGCGCTGGTACACTGCCTaGGCACAGGCATCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: GRAGGWCSVGDGGGACPGRWYTA*AQASRA
Trigger: TGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGCG...CCCTGGACATGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGCCAATGACTGTGTCCTaGCCATCACGCCGAGGATCC +
Preference number: 5 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRPMTVS*PSRRGS
Trigger: GGATCCTCGGCGTGATGGCAAGGACACAGTCATTGG...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GCTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTCCTGACGAAGCCCTaGCAGGGCCCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: ADSEGLFAALAGRTIGGLVLTKP*QGPHGG
Trigger: GCCGCCATGGGGGCCCTGCAAGGGCTTCGTCAGGAC...GAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGCTGAGCAAACAGGCTaGATGCTGTGGGATTGTCAG +
Preference number: 5 (lower is better)
Translates to: AVGDANLQGAALPAAGGGAEQTG*MLWDCQ
Trigger: CTGACAATCCCACAGCATCAAGCCTGTTTGCTCAGC...CCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTGGACCGGTGCTTCATaGCCTTGTAGGCGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGWTGAS*PCRRRW
Trigger: CCAACGCCGCCTACAAGGCAATGAAGCACCGGTCCA...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258787.12
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCTTGAGCAGCACGTCCTaGACCCTCTCCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGLSSTS*TLSTSA
Trigger: GGCTGAGGTGGAGAGGGTCAAGGACGTGCTGCTCAA...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGACTGCCTCTCAGCAATaGGTAGAAGGCGTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ETRTSRVRPSLRQEEGSGTASQQ*VEGVEV
Trigger: AACTTCCACGCCTTCTACCAATTGCTGAGAGGCAGT...CCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCAGTTCATGCAGCTGCTaGTCCTCACTGCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GRQLSHMVHQCLLGHCQASSCSC*SSLPLS
Trigger: GCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACT...GGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCGCTGGTACACTGCCTaGGCACAGGCATCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: LRRFICSAGGADNWRPRGRWYTA*AQASRA
Trigger: TGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGCG...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CCGGGAGCGGTGCAGGCACACCACGAGGTCGTCCTGGCCGCGGGCGTGCAGCACACAATGGTGGCGTTGTaGAAATACTCAACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PGAVQAHHEVVLAAGVQHTMVAL*KYSTLC
Trigger: GCAGAGCGTTGAGTATTTCAACAACGCCACCATTGT...GTGCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAAGCTTCCCAGCTACCTaGTCCTCATTGGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSSFPAT*SSLGLM
Trigger: CATCAAGCCCAATGAGGACAAGGTAGCTGGGAAGCT...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGAGAGTGGCGGCTGCCTaGCAGCCTGGAATCGCCGCT +
Preference number: 5 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVRVAAA*QPGIAA
Trigger: AGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCT...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGCTTGATGCTGTGGGATaGTCAGTGGCAGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRLDAVG*SVAEDR
Trigger: CCTGTCCTCTGCCACTGACAATCCCACAGCATCAAG...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GGGTGTGGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCAGGTTCAAGCAGTTCTaGTGCCTCAGCCTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: GCGRQLSHMVHQCLLGHCRFKQF*CLSLPS
Trigger: GCTCGGGAGGCTGAGGCACAAGAACTGCTTGAACCT...GCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCCACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CAA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGAGCACACAGGTGGACTaGAGCAGCACGTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRSTQVD*SSTSLT
Trigger: GGTCAAGGACGTGCTGCTCAAGTCCACCTGTGTGCT...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp ACTGTGCGAGCCAGCAGGGAGCGGAGCACGAGGTCCCGGGGTGTGGCCGTCAGCAACTGCTCGAAACTGTaGACGGGAAACACCTCGAAG +
Preference number: 5 (lower is better)
Translates to: TVRASRERSTRSRGVAVSNCSKL*TGNTSK
Trigger: CTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGTT...GCTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp TCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAAACTGCTCGAAACTGTaGACGGGAAACACCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SETRTSRVRPSLRQEEGSNCSKL*TGNTSK
Trigger: CTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGTT...TGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCTCCACAATGGTGGCGTaGTTGAAATACTCAACGCTC +
Preference number: 5 (lower is better)
Translates to: VGDANLQGAALPAAGGGVSTMVA*LKYSTL
Trigger: GAGCGTTGAGTATTTCAACAACGCCACCATTGTGGA...GACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCCCAAACTCCATGGTCTaGTCTGTGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGPNSMV*SVGQSW
Trigger: CCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGG...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGAGGAAATCTCTGTTCTaGTCGATGAAGCCTTCCACG +
Preference number: 5 (lower is better)
Translates to: GDANLQGAALPAAGGGVRRKSLF*SMKPST
Trigger: CGTGGAAGGCTTCATCGACAAGAACAGAGATTTCCT...CCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp ACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGGGTCAGGGCGGTATTCACAGGTCATCTaGTACCTGAGCAGGAATCGA +
Preference number: 5 (lower is better)
Translates to: TRTSRVRPSLRQEEGSGRYSQVI*YLSRNR
Trigger: TCGATTCCTGCTCAGGTACAAGATGACCTGTGAATA...CCGCCCTGACCCCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGTGGAAGCGGTTCACCTaGCGGACATGGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRWKRFT*RTWLEK
Trigger: CTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCCA...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCAGCTCCCCAACGCGGTaGTCCAATGGCGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SVTAWWLCSSLSKALCTVSSPTR*SNGGRE
Trigger: CTCCCGGCCGCCATTGGACAACCGCGTTGGGGAGCT...GACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGTCACCCACGTGCTGCTaGAGGACCCGAGACTGCCCA +
Preference number: 5 (lower is better)
Translates to: FSMSSLPPEATVRASRERSPTCC*RTRDCP
Trigger: TGGGCAGTCTCGGGTCCTCAAGCAGCACGTGGGTGA...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS CCA 90 bp TGCAGGTGTCCCTGGACCGGTGCTTCATTGCCTTGTAGGCGGCGTTaGCCACAGCATAGAGATGGGGTGGCCGCTCATAGAGCTCACGGC +
Preference number: 5 (lower is better)
Translates to: CRCPWTGASLPCRRR*PQHRDGVAAHRAHG
Trigger: GCCGTGAGCTCTATGAGCGGCCACCCCATCTCTATGCTGTGGCCAACGCCGCCTACAAGGCAATGAAGCACCGGTCCAGGGACACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000648014.1
CDS-3UTR CAA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGCCGGCTGGAAACACCTaGCCTCACCTTCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGPAGNT*PHLPVP
Trigger: AGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGG...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCGTCCTCCATGGTCACTaGGTCCAAAAGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: GRQLSHMVHQCLLGHCQAVLHGH*VQKHKV
Trigger: GACTTTGTGCTTTTGGACCAAGTGACCATGGAGGAC...GGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp AAGATTCGGTCAGTGATGGTGCCAGCAGAGCTGCAGGCCTCGTCCAGCACGGCCTGGACCGGTGCTTCATaGCCTTGTAGGCGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: KIRSVMVPAELQASSSTAWTGAS*PCRRRW
Trigger: CCAACGCCGCCTACAAGGCAATGAAGCACCGGTCCA...GGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGACCGAATCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CAA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCCCTCTGGCTTGGATaGGTGACAGCAGCGATGTAC +
Preference number: 5 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCALWLG*VTAAMY
Trigger: GTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGC...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGCGGTTGGTGCGGGCATaGCCAAAGGCCTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASRLVRA*PKASST
Trigger: TGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACCG...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGTCACCCACGTGCTGCTaGAGGACCCGAGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGSPTCC*RTRDFS
Trigger: GGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGA...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TGCAGTCGGAGACGCGAACCTCCAGGGTGCGGCCCTCCCTGCGGCAGGAGGAGGCCCTGGTGTGTGAAATaGTATACAGCAGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: CSRRREPPGCGPPCGRRRPWCVK*YTAGFL
Trigger: GAGAAACCCTGCTGTATACAATTTCACACACCAGGG...CCTCCTCCTGCCGCAGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648014.1
CDS-3UTR CAA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGTGGGGTCCGTGCTGTaGTACAGCAGCCGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LRRFICSAGGADNWRPRGVGSVL*YSSRLK
Trigger: CTTCAAGCGGCTGCTGTACAACAGCACGGACCCCAC...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp AGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGAGCTTCCCAGCTACCTaGTCCTCATTGGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RFICSAGGADNWRPRGAASFPAT*SSLGLM
Trigger: CATCAAGCCCAATGAGGACAAGGTAGCTGGGAAGCT...CGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp AGCCTCCGGCAGCGCCACCTCGCCAAGGTGCCCCGCCATGCCTTCTGCAATAGCTGGAAGCGGTTCACCTaGCGGACATGGCTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: SLRQRHLAKVPRHAFCNSWKRFT*RTWLEK
Trigger: CTTTTCAAGCCATGTCCGCAAGGTGAACCGCTTCCA...GCTATTGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGCGCTGCCGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCACTCAGAAGGTTTATTaGCAGCGCTGGCGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCTQKVY*QRWRGG
Trigger: TCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS CCA 90 bp TGGGCTGGTGGGGATCACAGGATGGGACCTTTCACTCTGTGGGCGTaGGAAGCCACTGCAGGATTTTCAGCACGGGTGCCACCATCGCTG +
Preference number: 5 (lower is better)
Translates to: WAGGDHRMGPFTLWA*EATAGFSARVPPSL
Trigger: CAGCGATGGTGGCACCCGTGCTGAAAATCCTGCAGTGGCTTCCCACGCCCACAGAGTGAAAGGTCCCATCCTGTGATCCCCACCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 90 bp GGTGACTGGGCTGGTGGGGATCACAGGATGGGACCTTTCACTCTGTaGGCGTGGGAAGCCACTGCAGGATTTTCAGCACGGGTGCCACCA +
Preference number: 5 (lower is better)
Translates to: GDWAGGDHRMGPFTL*AWEATAGFSARVPP
Trigger: TGGTGGCACCCGTGCTGAAAATCCTGCAGTGGCTTCCCACGCCCACAGAGTGAAAGGTCCCATCCTGTGATCCCCACCAGCCCAGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 90 bp GAGGACGATGGGCTAGGTGGGGTTGAGTGGGCAGAGAGGGGGAATTaGGGTAGTGATGGAAGGGTCACAAGCTGGTCCAGCTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: EDDGLGGVEWAERGN*GSDGRVTSWSSLLP
Trigger: GGGCAGCAAGCTGGACCAGCTTGTGACCCTTCCATCACTACCCCAATTCCCCCTCTCTGCCCACTCAACCCCACCTAGCCCATCGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS-3UTR CAA 90 bp ATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACCCGGCTGGAAACACCTaGCCTCACCTTCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: ITPRIPAPGFHDTVDPVHPAGNT*PHLPVP
Trigger: AGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGG...GTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCCCTCTGGCTTGGATaGGTGACAGCAGCGATGTAC +
Preference number: 5 (lower is better)
Translates to: LRRFICSAGGADNWRPRGALWLG*VTAAMY
Trigger: GTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGC...ACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTTCACCCACGTGCTGCTaGAGGACCCGAGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGSPTCC*RTRDFS
Trigger: GGAGAAGTCTCGGGTCCTCAAGCAGCACGTGGGTGA...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCTGTGCACAGTCATGTaGAGTCCTGCTCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: RRFICSAGGADNWRPRGALCTVM*SPAPWC
Trigger: ACACCAGGGAGCAGGACTCAACATGACTGTGCACAG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGCCAATGACTGTGTCCTaGCCATCACGCCGAGGATCC +
Preference number: 5 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGPMTVS*PSRRGS
Trigger: GGATCCTCGGCGTGATGGCAAGGACACAGTCATTGG...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGACAATGGTGGCGTTGTaGAAATACTCAACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: GLFAALAGRTIGGLGVRRTMVAL*KYSTLC
Trigger: GCAGAGCGTTGAGTATTTCAACAACGCCACCATTGT...CCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGAGGAAATCTCTGTTCTaGTCGATGAAGCCTTCCACG +
Preference number: 5 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGRKSLF*SMKPST
Trigger: CGTGGAAGGCTTCATCGACAAGAACAGAGATTTCCT...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGGCCACCATGGAGTTCTaGAAGAGTGTGCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVATMEF*KSVPAV
Trigger: GACGGCTGGCACACTCTTCAAGAACTCCATGGTGGC...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGAGCTTCCCAGCTACCTaGTCCTCATTGGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: EGLFAALAGRTIGGLGVRSFPAT*SSLGLM
Trigger: CATCAAGCCCAATGAGGACAAGGTAGCTGGGAAGCT...CCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CTTGGAGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTTGAAGAGTGTGCCAGAGTGGCGGCTGCCTaGCAGCCTGGAATCGCCGCT +
Preference number: 5 (lower is better)
Translates to: LGGKVLHQGHHGVLEECARVAAA*QPGIAA
Trigger: AGCGGCGATTCCAGGCTGCAAGGCAGCCGCCACTCT...GGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp AAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGCTGAGCAAACAGGCTaGATGCTGTGGGATTGTCAG +
Preference number: 5 (lower is better)
Translates to: KVYLQRWRGGQLAASGCGAEQTG*MLWDCQ
Trigger: CTGACAATCCCACAGCATCAAGCCTGTTTGCTCAGC...GCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGCCCGGTTCCGGATCTaGTGGAAGCGGTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASARFRI*WKRFTL
Trigger: CAAGGTGAACCGCTTCCACAAGATCCGGAACCGGGC...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GTACACTGCCTTGGCACAGGCATCCCGGGCATAGCTGGCCTCAGCTGCAGTGTGACTCAGAAGGTTTATTaGCAGCGCTGGCGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: VHCLGTGIPGIAGLSCSVTQKVY*QRWRGG
Trigger: TCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT...CACACTGCAGCTGAGGCCAGCTATGCCCGGGATGCCTGTGCCAAGGCAGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS GCA 90 bp CCACAGGAGGCCCAGAACATTGTGGTGGGTACTCAGGTCCCAGAATaGCCAGGTGGGAGAACCCCAGTTGGGCACAAGTTGGAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: PQEAQNIVVGTQVPE*PGGRTPVGHKLEEG
Trigger: CCCCTCTTCCAACTTGTGCCCAACTGGGGTTCTCCCACCTGGGCATTCTGGGACCTGAGTACCCACCACAATGTTCTGGGCCTCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS GCA 90 bp TATGAAGGGATAGCCCTGCCTCCCCACCTCCAGGGCAGAGAAGGTTaGCACAGTGACGACAATGGCACCAAAGCTGGGTCCCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: YEGIALPPHLQGREG*HSDDNGTKAGSPTR
Trigger: CCTGGTTGGGGACCCAGCTTTGGTGCCATTGTCGTCACTGTGGCAACCTTCTCTGCCCTGGAGGTGGGGAGGCAGGGCTATCCCTTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS-3UTR CAA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGAGCACAAAGTCAGGTTaGCCATACTCAGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RRFICSAGGADNWRPRGASTKSG*PYSGPS
Trigger: GGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGCT...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTAGCACACAGGTGGACTaGAGCAGCACGTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGSTQVD*SSTSLT
Trigger: GGTCAAGGACGTGCTGCTCAAGTCCACCTGTGTGCT...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTAGTTCATGCAGCTGCTaGTCCTCACTGCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVSSCSC*SSLPLS
Trigger: GCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACT...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp TCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGCCAAACTCCATGGTCTaGTCTGTGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SAKLHGLVCGAELAAGVVPNSMV*SVGQSW
Trigger: CCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGG...CACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp GTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGGCGGGTATTCACAGGTCATCTaGTACCTGAGCAGGAATCGA +
Preference number: 5 (lower is better)
Translates to: VYLQRWRGGQLAASGCGGYSQVI*YLSRNR
Trigger: TCGATTCCTGCTCAGGTACAAGATGACCTGTGAATA...CCCGCCGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGAGCCCAGCAGGTGGTaGGGCCATGTGTATTCACAG +
Preference number: 5 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASEPSRW*GHVYSQ
Trigger: CTGTGAATACACATGGCCCAACCACCTGCTGGGCTC...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS TCA 90 bp GCAAGGCACTCACCGCCCTTTCTATTGGGACAGTCATGGGACCCCTaGAACTGTGGGAGACCCAGAGGTAGCCTGGCCTTGATCCCTACC +
Preference number: 5 (lower is better)
Translates to: ARHSPPFLLGQSWDP*NCGRPRGSLALIPT
Trigger: GGTAGGGATCAAGGCCAGGCTACCTCTGGGTCTCCCACAGTTTCAGGGGTCCCATGACTGTCCCAATAGAAAGGGCGGTGAGTGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS GCA 90 bp AGGCCAGCAGCGTGCTGGTTCCTGCTTGTATCGATGTTTGCGACGTaGTGTTTGGGGACCCTCTGCTCCTACCCCTTGGACTCCACACAG +
Preference number: 5 (lower is better)
Translates to: RPAACWFLLVSMFAT*CLGTLCSYPLDSTQ
Trigger: CTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 90 bp CAAAGCTTGTGGAGACAGTCCCTGGGCGCGCCTATCTCACAGAGGTaGTCAGAGTCAATGCCCGTGTCCCCAGGAGCACCACTTCAGTGT +
Preference number: 5 (lower is better)
Translates to: QSLWRQSLGAPISQR*SESMPVSPGAPLQC
Trigger: ACACTGAAGTGGTGCTCCTGGGGACACGGGCATTGACTCTGAGCACCTCTGTGAGATAGGCGCGCCCAGGGACTGTCTCCACAAGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 90 bp AGGTTTGCCATACTCAGGGCCTTCCTCGTCCTCCATCCTGCCGGCTaGAAACACCTTGCCTCACCTTCCTGTGCCTGCTGGAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: RFAILRAFLVLHPAG*KHLASPSCACWKDS
Trigger: ACTGTCCTTCCAGCAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAGGACGAGGAAGGCCCTGAGTATGGCAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CCA 90 bp CCCTCTGCTCCTACCCCTTGGACTCCACACAGGGACTATGGCCCATaGAGTGATGGGTGTCAGGTGCCAGTACCTGAGCAGGAATCGAGA +
Preference number: 5 (lower is better)
Translates to: PSAPTPWTPHRDYGP*SDGCQVPVPEQESR
Trigger: TCTCGATTCCTGCTCAGGTACTGGCACCTGACACCCATCACTCCATGGGCCATAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 90 bp CGATGTTTGCGACGTGCTGTTTGGGGACCCTCTGCTCCTACCCCTTaGACTCCACACAGGGACTATGGCCCATGGAGTGATGGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: RCLRRAVWGPSAPTP*TPHRDYGPWSDGCQ
Trigger: CTGACACCCATCACTCCATGGGCCATAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 90 bp TGCTCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTaGTTGGGCCATGTGTATTCACAGGTCATCTTGTACCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: CSRRALTAALSEPSR*LGHVYSQVILYLSP
Trigger: TGGTGACAGGTACAAGATGACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS-3UTR CAA 90 bp CCAGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTTGAGCAGCACGTCCTaGACCCTCTCCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PGAIWQPGCDAQTPPLQDLSSTS*TLSTSA
Trigger: GGCTGAGGTGGAGAGGGTCAAGGACGTGCTGCTCAA...GTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGAAGCCCGGTTGGTGCGGGCATaGCCAAAGGCCTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: QYGSQDAMHRLHLFRTEARLVRA*PKASST
Trigger: TGTGCTGGAGGCCTTTGGCAATGCCCGCACCAACCG...GGCTTCAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGAGTTCATGCAGCTGCTaGTCCTCACTGCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASSSCSC*SSLPLS
Trigger: GCTGAGAGGCAGTGAGGACAAGCAGCTGCATGAACT...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCAACTGCTCGAAACTGTaGACGGGAAACACCTCGAAG +
Preference number: 5 (lower is better)
Translates to: QKVYLQRWRGGQLAASGCNCSKL*TGNTSK
Trigger: CTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGTT...GCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp CCAGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACGTGGGGTCCGTGCTGTaGTACAGCAGCCGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PGAIWQPGCDAQTPPLQDVGSVL*YSSRLK
Trigger: CTTCAAGCGGCTGCTGTACAACAGCACGGACCCCAC...GTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS TCA 90 bp GGACAGGCTGAGGTCAAGGCACAAAAGGTATGTGGAGGGTCTGTATaGAGGGATAGCCCTGCCTCCCCACCTCCAGGGCAGAGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: GQAEVKAQKVCGGSV*RDSPASPPPGQRRL
Trigger: CAACCTTCTCTGCCCTGGAGGTGGGGAGGCAGGGCTATCCCTTCATACAGACCCTCCACATACCTTTTGTGCCTTGACCTCAGCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS GCA 90 bp CAAAGTCAGGTTTGCCATACTCAGGGCCTTCCTCGTCCTCCATCCTaGCGGCTGGAAACACCTTGCCTCACCTTCCTGTGCCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QSQVCHTQGLPRPPS*RLETPCLTFLCLLE
Trigger: TTCCAGCAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAGGACGAGGAAGGCCCTGAGTATGGCAAACCTGACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CCA 90 bp GGCCCAGAACATTGTGGTGGGTACTCAGGTCCCAGAATGCCCAGGTaGGAGAACCCCAGTTGGGCACAAGTTGGAAGAGGGGACCATTTG +
Preference number: 5 (lower is better)
Translates to: GPEHCGGYSGPRMPR*ENPSWAQVGRGDHL
Trigger: CAAATGGTCCCCTCTTCCAACTTGTGCCCAACTGGGGTTCTCCCACCTGGGCATTCTGGGACCTGAGTACCCACCACAATGTTCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 90 bp GGTTCTAGATCCTTGCTGTCCAACAGGGCCGCCACTGCTCACCTGTaGATGCTAAGCCCTTGCATGTGCTACTGCCTGGAGGAGCCGTTT +
Preference number: 5 (lower is better)
Translates to: GSRSLLSNRAATAHL*MLSPCMCYCLEEPF
Trigger: AAACGGCTCCTCCAGGCAGTAGCACATGCAAGGGCTTAGCATCCACAGGTGAGCAGTGGCGGCCCTGTTGGACAGCAAGGATCTAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS-3UTR CAA 90 bp ACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGGTCCTCCATGGTCACTaGGTCCAAAAGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: TQKVYLQRWRGGQLAASGVLHGH*VQKHKV
Trigger: GACTTTGTGCTTTTGGACCAAGTGACCATGGAGGAC...CCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp GACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTCCTCCATGGTCACTaGGTCCAAAAGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: DSEGLFAALAGRTIGGLGVLHGH*VQKHKV
Trigger: GACTTTGTGCTTTTGGACCAAGTGACCATGGAGGAC...CCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGACTGCCTCTCAGCAATaGGTAGAAGGCGTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SEGLFAALAGRTIGGLGVTASQQ*VEGVEV
Trigger: AACTTCCACGCCTTCTACCAATTGCTGAGAGGCAGT...CACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTGCAACTGCCTCTCAGCAATaGGTAGAAGGCGTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CLWGRAGGWCSVGDGGGATASQQ*VEGVEV
Trigger: AACTTCCACGCCTTCTACCAATTGCTGAGAGGCAGT...TGCACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp TGTGTCCTTGCCATCACGCCGAGGATCCCGGCCCCGGGGTTCCATGACACTGTTACTGCCTCTCAGCAATaGGTAGAAGGCGTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CVLAITPRIPAPGFHDTVTASQQ*VEGVEV
Trigger: AACTTCCACGCCTTCTACCAATTGCTGAGAGGCAGT...AACAGTGTCATGGAACCCCGGGGCCGGGATCCTCGGCGTGATGGCAAGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGCCCTGGTGTGTGAAATaGTATACAGCAGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RRFICSAGGADNWRPRGAPWCVK*YTAGFL
Trigger: GAGAAACCCTGCTGTATACAATTTCACACACCAGGG...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS-3UTR CAA 90 bp TTCTCTATGAGTTCCCTGCCTCCCGAGGCAACTGTGCGAGCCAGCAGGGAGCGGAACTGCTCGAAACTGTaGACGGGAAACACCTCGAAG +
Preference number: 5 (lower is better)
Translates to: FSMSSLPPEATVRASRERNCSKL*TGNTSK
Trigger: CTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGTT...CCGCTCCCTGCTGGCTCGCACAGTTGCCTCGGGAGGCAGGGAACTCATAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTGGCCACCATGGAGTTCTaGAAGAGTGTGCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: LDPEVSAKLHGLVCGAELATMEF*KSVPAV
Trigger: GACGGCTGGCACACTCTTCAAGAACTCCATGGTGGC...CAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp CTCGGTCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCTTGATGCTGTGGGATaGTCAGTGGCAGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LGHCLVALLITVQGTVHSLDAVG*SVAEDR
Trigger: CCTGTCCTCTGCCACTGACAATCCCACAGCATCAAG...ACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp GGATCCCGGCCCCGGGGTTCCATGACACTGTTGATCCTGTTCACCACCCACTCAGCTGAGCAAACAGGCTaGATGCTGTGGGATTGTCAG +
Preference number: 5 (lower is better)
Translates to: GSRPRGSMTLLILFTTHSAEQTG*MLWDCQ
Trigger: CTGACAATCCCACAGCATCAAGCCTGTTTGCTCAGC...TGAGTGGGTGGTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp GGCCGTCAGCTCAGCCACATGGTCCACCAGTGCCTCCTCGGCCACTGCCAGGCCTTCTATTCCCTCTCCTaGAGAAGTTCTCATGAAACA +
Preference number: 5 (lower is better)
Translates to: GRQLSHMVHQCLLGHCQAFYSLS*RSSHET
Trigger: TGTTTCATGAGAACTTCTCAAGGAGAGGGAATAGAA...GGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAGCTGACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS GCA 90 bp TTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTTGGGGACCCTCTaGTCCTACCCCTTGGACTCCACACAGGGACTATGGCCCATGGAG +
Preference number: 5 (lower is better)
Translates to: FLLVSMFATCCLGTL*SYPLDSTQGLWPME
Trigger: CTCCATGGGCCATAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 90 bp AGTGGGGAGCTCCAAGTCCCTAGAGACACTGCTCCAGTCATAGGGTaGTCCCAGTTCAGTGGGGGAGTTCGGAGTCTGTGGAAACACTGT +
Preference number: 5 (lower is better)
Translates to: SGELQVPRDTAPVIG*SQFSGGVRSLWKHC
Trigger: ACAGTGTTTCCACAGACTCCGAACTCCCCCACTGAACTGGGAGCACCCTATGACTGGAGCAGTGTCTCTAGGGACTTGGAGCTCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 90 bp CAGCGTGCTGGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTTaGGGACCCTCTGCTCCTACCCCTTGGACTCCACACAGGGACTAT +
Preference number: 5 (lower is better)
Translates to: QRAGSCLYRCLRRAV*GPSAPTPWTPHRDY
Trigger: ATAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS-3UTR CAA 90 bp AGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGGGGTGCGTATTCACAGGTCATCTaGTACCTGAGCAGGAATCGA +
Preference number: 5 (lower is better)
Translates to: RRFICSAGGADNWRPRGAYSQVI*YLSRNR
Trigger: TCGATTCCTGCTCAGGTACAAGATGACCTGTGAATA...CGCACCCCGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS TCA 90 bp CATGGGACCCCTGAAACTGTGGGAGACCCAGAGGTAGCCTGGCCTTaGTCCCTACCCCCGTCTTGTGGGAAAGAGAATTTATGGGAACAG +
Preference number: 5 (lower is better)
Translates to: HGTPETVGDPEVAWP*SLPPSCGKENLWEQ
Trigger: CTGTTCCCATAAATTCTCTTTCCCACAAGACGGGGGTAGGGATCAAGGCCAGGCTACCTCTGGGTCTCCCACAGTTTCAGGGGTCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS TCA 90 bp TCCCAGTTCAGTGGGGGAGTTCGGAGTCTGTGGAAACACTGTCTGTaGACCAGAGGACACAGTGGGCAGGCCACAGTTTGCAAACACACC +
Preference number: 5 (lower is better)
Translates to: SQFSGGVRSLWKHCL*TRGHSGQATVCKHT
Trigger: GGTGTGTTTGCAAACTGTGGCCTGCCCACTGTGTCCTCTGGTTCACAGACAGTGTTTCCACAGACTCCGAACTCCCCCACTGAACTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 90 bp GGGAGACCCAGAGGTAGCCTGGCCTTGATCCCTACCCCCGTCTTGTaGGAAAGAGAATTTATGGGAACAGCAGCTGCTAATGAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: GRPRGSLALIPTPVL*EREFMGTAAANEGS
Trigger: GCTCCCTTCATTAGCAGCTGCTGTTCCCATAAATTCTCTTTCCCACAAGACGGGGGTAGGGATCAAGGCCAGGCTACCTCTGGGTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 90 bp TTGGGCTGTGGCATTACACAGCAAGGCACTCACCGCCCTTTCTATTaGGACAGTCATGGGACCCCTGAAACTGTGGGAGACCCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: LGCGITQQGTHRPFY*DSHGTPETVGDPEV
Trigger: TACCTCTGGGTCTCCCACAGTTTCAGGGGTCCCATGACTGTCCCAATAGAAAGGGCGGTGAGTGCCTTGCTGTGTAATGCCACAGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 90 bp GGGAAGCCCACCTCGTGGGGAGCTTATTGTTCACAGAGACACTTATaGGTCCCAGAGAGCCCTCATCTGGAGGTGTCTCAGATAAAGGGG +
Preference number: 5 (lower is better)
Translates to: GKPTSWGAYCSQRHL*VPESPHLEVSQIKG
Trigger: CCCCTTTATCTGAGACACCTCCAGATGAGGGCTCTCTGGGACCCATAAGTGTCTCTGTGAACAATAAGCTCCCCACGAGGTGGGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 90 bp AGAGACCATAGAGACACCGCCAGTGTCCCAGACAGCCCTACTTCATaGAAACTCAGAGTCTGCGTGGACACTCCTTGTGTTCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: RDHRDTASVPDSPTS*KLRVCVDTPCVPEG
Trigger: GCCCTCTGGAACACAAGGAGTGTCCACGCAGACTCTGAGTTTCCATGAAGTAGGGCTGTCTGGGACACTGGCGGTGTCTCTATGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 90 bp AGAGACAATGGTCATGTCGCAGAGAGCTTCCACCTCATAGGGGAATaGAGAGTTTGTGGAGACATCGCCCATGTCCGAGGGAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: RDNGHVAESFHLIGE*RVCGDIAHVRGSSQ
Trigger: CTGGGAGCTCCCTCGGACATGGGCGATGTCTCCACAAACTCTCCATTCCCCTATGAGGTGGAAGCTCTCTGCGACATGACCATTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 90 bp GAAGTCTCGGCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTATaGGGACAGGCTGAGGTCAAGGCACAAAAGGTATGTGGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: EVSAKLHGLVCGAEL*GQAEVKAQKVCGGS
Trigger: AGACCCTCCACATACCTTTTGTGCCTTGACCTCAGCCTGTCCCCATAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGAGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS-3UTR CAA 90 bp GACGTCCCCTGCATAGTGCTTGATCCGGAAGTCTCGGCCAAACTCCATGGTCTTCTGTGCACAGTCATGTaGAGTCCTGCTCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: DVPCIVLDPEVSAKLHGLLCTVM*SPAPWC
Trigger: ACACCAGGGAGCAGGACTCAACATGACTGTGCACAG...AAGACCATGGAGTTTGGCCGAGACTTCCGGATCAAGCACTATGCAGGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp TCTTGTCTGTGGGGCAGAGCTGGCGGCTGGTGTAGTGTAGGTGATGGCGGTGGTACAATGGTGGCGTTGTaGAAATACTCAACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SCLWGRAGGWCSVGDGGGTMVAL*KYSTLC
Trigger: GCAGAGCGTTGAGTATTTCAACAACGCCACCATTGT...ACCACCGCCATCACCTACACTACACCAGCCGCCAGCTCTGCCCCACAGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CTGACTCAGAAGGTTTATTTGCAGCGCTGGCGGGGCGGACAATTGGCGGCCTCGTCCACAATGGTGGCGTaGTTGAAATACTCAACGCTC +
Preference number: 5 (lower is better)
Translates to: LTQKVYLQRWRGGQLAASSTMVA*LKYSTL
Trigger: GAGCGTTGAGTATTTCAACAACGCCACCATTGTGGA...CGAGGCCGCCAATTGTCCGCCCCGCCAGCGCTGCAAATAAACCTTCTGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258787.12
ENST00000495831.5
CDS GCA 90 bp AACAGGGCCGCCACTGCTCACCTGTGGATGCTAAGCCCTTGCATGTaGTACTGCCTGGAGGAGCCGTTTTTAGTTCTAGGTCACTTTCAC +
Preference number: 5 (lower is better)
Translates to: NRAATAHLWMLSPCM*YCLEEPFLVLGHFH
Trigger: GTGAAAGTGACCTAGAACTAAAAACGGCTCCTCCAGGCAGTAGCACATGCAAGGGCTTAGCATCCACAGGTGAGCAGTGGCGGCCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS-3UTR CAA 90 bp CCACTATCCTCAAACCCTGTTTCCTGCTCTTCACTTGTGAATCTGCTGTCCGGCCCAAACTCCATGGTCTaGTCTGTGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PLSSNPVSCSSLVNLLSGPNSMV*SVGQSW
Trigger: CCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGG...GCCGGACAGCAGATTCACAAGTGAAGAGCAGGAAACAGGGTTTGAGGATAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS GCA 90 bp GCCGCCACTGCTCACCTGTGGATGCTAAGCCCTTGCATGTGCTACTaGCTGGAGGAGCCGTTTTTAGTTCTAGGTCACTTTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: AATAHLWMLSPCMCY*LEEPFLVLGHFHCI
Trigger: AATGCAGTGAAAGTGACCTAGAACTAAAAACGGCTCCTCCAGGCAGTAGCACATGCAAGGGCTTAGCATCCACAGGTGAGCAGTGGCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 90 bp TCTCCCCTGAGCTGCAGGTTCCTCATGAAGTCCTCCATGGTCACTTaGTCCAAAAGCACAAAGTCAGGTTTGCCATACTCAGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SPLSCRFLMKSSMVT*SKSTKSGLPYSGPS
Trigger: GGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGCTTTTGGACCAAGTGACCATGGAGGACTTCATGAGGAACCTGCAGCTCAGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp AGATCCACAATGGTGGCGTTGTTGAAATACTCAACGCTCTGCCAGGTGATGCCCCTGTGCACAGTCATGTaGAGTCCTGCTCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: RSTMVALLKYSTLCQVMPLCTVM*SPAPWC
Trigger: ACACCAGGGAGCAGGACTCAACATGACTGTGCACAG...GGGCATCACCTGGCAGAGCGTTGAGTATTTCAACAACGCCACCATTGTGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp CTTGGAGGCAAGGTTCTCCACCAGGGCCACCATGGAGTTCTTGAAGAGTGTGCCTCCACAATGGTGGCGTaGTTGAAATACTCAACGCTC +
Preference number: 5 (lower is better)
Translates to: LGGKVLHQGHHGVLEECASTMVA*LKYSTL
Trigger: GAGCGTTGAGTATTTCAACAACGCCACCATTGTGGA...GGCACACTCTTCAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp TTGAGTCCTGCTCCCTGGTGTGTGAAATTGTATACAGCAGGGTTTCTCTCCAAGGCCCGGTTCCGGATCTaGTGGAAGCGGTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: LSPAPWCVKLYTAGFLSKARFRI*WKRFTL
Trigger: CAAGGTGAACCGCTTCCACAAGATCCGGAACCGGGC...CTTGGAGAGAAACCCTGCTGTATACAATTTCACACACCAGGGAGCAGGACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS GCA 90 bp CACACATGTCTTCCCAGATATTTTGGTGTCTTGAGGCCAGCAGCGTaGTGGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: HTCLPRYFGVLRPAA*WFLLVSMFATCCLG
Trigger: CCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGCCTCAAGACACCAAAATATCTGGGAAGACATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 90 bp TCGAACCTGAGCTGCAGGTTCCTCATGAAGTCCTCCATGGTCACTTaGTCCAAAAGCACAAAGTCAGGTTTGCCATACTCAGGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SNLSCRFLMKSSMVT*SKSTKSGLPYSGPS
Trigger: GGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGCTTTTGGACCAAGTGACCATGGAGGACTTCATGAGGAACCTGCAGCTCAGGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000648014.1
CDS CCA 90 bp ACATGTCTTCCCAGATATTTTGGTGTCTTGAGGCCAGCAGCGTGCTaGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTTGGGGACC +
Preference number: 5 (lower is better)
Translates to: TCLPRYFGVLRPAAC*FLLVSMFATCCLGT
Trigger: GGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGCCTCAAGACACCAAAATATCTGGGAAGACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 90 bp AGGTCACTTTCACTGCATTTAAACAACCACGCCGGCTTTGGGCTGTaGCATTACACAGCAAGGCACTCACCGCCCTTTCTATTGGGACAG +
Preference number: 5 (lower is better)
Translates to: RSLSLHLNNHAGFGL*HYTARHSPPFLLGQ
Trigger: CTGTCCCAATAGAAAGGGCGGTGAGTGCCTTGCTGTGTAATGCCACAGCCCAAAGCCGGCGTGGTTGTTTAAATGCAGTGAAAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS-3UTR CAA 90 bp AAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTTTCGCCCTCTGGCTTGGATaGGTGACAGCAGCGATGTAC +
Preference number: 5 (lower is better)
Translates to: KAPRRMQPWLTTILKPCFALWLG*VTAAMY
Trigger: GTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGC...GAAACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CAA 90 bp AGGTGCAATATGGCAGCCAGGATGCGATGCACAGACTCCACCTCTTCAGGACTGCCCTGGTGTGTGAAATaGTATACAGCAGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RCNMAARMRCTDSTSSGLPWCVK*YTAGFL
Trigger: GAGAAACCCTGCTGTATACAATTTCACACACCAGGG...CAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATTGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp AAGGCTCCCAGAAGAATGCAGCCATGGTTAACCACTATCCTCAAACCCTGTTTCCCAATGACTGTGTCCTaGCCATCACGCCGAGGATCC +
Preference number: 5 (lower is better)
Translates to: KAPRRMQPWLTTILKPCFPMTVS*PSRRGS
Trigger: GGATCCTCGGCGTGATGGCAAGGACACAGTCATTGG...GAAACAGGGTTTGAGGATAGTGGTTAACCATGGCTGCATTCTTCTGGGAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS-3UTR CAA 90 bp TCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCATGTTCCACAATGGTGGCGTaGTTGAAATACTCAACGCTC +
Preference number: 5 (lower is better)
Translates to: SLPGGSAHHCPRHCAQSCSTMVA*LKYSTL
Trigger: GAGCGTTGAGTATTTCAACAACGCCACCATTGTGGA...ACATGACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464434.1
ENST00000495831.5
CDS-3UTR CAA 90 bp TCACTGCCTGGTGGCTCTGCTCATCACTGTCCAAGGCACTGTGCACAGTCATGTAGGAAATCTCTGTTCTaGTCGATGAAGCCTTCCACG +
Preference number: 5 (lower is better)
Translates to: SLPGGSAHHCPRHCAQSCRKSLF*SMKPST
Trigger: CGTGGAAGGCTTCATCGACAAGAACAGAGATTTCCT...ACATGACTGTGCACAGTGCCTTGGACAGTGATGAGCAGAGCCACCAGGCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495831.5
CDS-3UTR CAA 90 bp GTGAAATTGTATACAGCAGGGTTTCTCTCCAAGTGCAGTTCATGCAGCTGCTTGGCTGGTCTCGAACTCTaGGCCTCAGGTGATCCACCC +
Preference number: 5 (lower is better)
Translates to: VKLYTAGFLSKCSSCSCLAGLEL*ASGDPP
Trigger: GGGTGGATCACCTGAGGCCAAGAGTTCGAGACCAGC...CAAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS TCA 90 bp CCTTCCAGTATTGAACGAACAAACGTGGGGGAAGGTCAGACAGTGTaGACAGTTTCTGTGTGCCAGCAAGCTCCCCATTCAGCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PSSIERTNVGEGQTV*TVSVCQQAPHSAVQ
Trigger: CTGAACAGCTGAATGGGGAGCTTGCTGGCACACAGAAACTGTTCACACTGTCTGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS GCA 90 bp CAGCCCTCATACCCATGTTCCCACCTGTATGTCCCCACATGCATGTaGTCACACACATGTCTTCCCAGATATTTTGGTGTCTTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: QPSYPCSHLYVPTCM*SHTCLPRYFGVLRP
Trigger: TGGCCTCAAGACACCAAAATATCTGGGAAGACATGTGTGTGAGCACATGCATGTGGGGACATACAGGTGGGAACATGGGTATGAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 90 bp CTCACACAGCCCTCATACCCATGTTCCCACCTGTATGTCCCCACATaGATGTGCTCACACACATGTCTTCCCAGATATTTTGGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: LTQPSYPCSHLYVPT*MCSHTCLPRYFGVL
Trigger: CAAGACACCAAAATATCTGGGAAGACATGTGTGTGAGCACATGCATGTGGGGACATACAGGTGGGAACATGGGTATGAGGGCTGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS TCA 90 bp ACACACAGGCAGGAGAACAAACAGACTTGCGCTTCCTTCCAGTATTaGACGAACAAACGTGGGGGAAGGTCAGACAGTGTGAACAGTTTC +
Preference number: 5 (lower is better)
Translates to: THRQENKQTCASFQY*TNKRGGRSDSVNSF
Trigger: GAAACTGTTCACACTGTCTGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTCTGTTTGTTCTCCTGCCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS-3UTR CAA 90 bp GCAACACATAAGTTAATAGCCATCATGACAACCCCTGAAGACACCTGGGCTTTGCCCTGGTGTGTGAAATaGTATACAGCAGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ATHKLIAIMTTPEDTWALPWCVK*YTAGFL
Trigger: GAGAAACCCTGCTGTATACAATTTCACACACCAGGG...CAAAGCCCAGGTGTCTTCAGGGGTTGTCATGATGGCTATTAACTTATGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464434.1
CDS TCA 72 bp TGGTCTCCTCCGCTGGTCACGCTCAGCCCCGTCACCTaGGCGGAGCGCGGGGTCAGAGTGCAGCCGCCTCAA +
Preference number: 6 (lower is better)
Translates to: WSPPLVTLSPVT*AERGVRVQPPQ
Trigger: TTGAGGCGGCTGCACTCTGACCCCGCGCTCCGCTCAGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 72 bp GGGGTGGCCGCTCATAGAGCTCACGGCCCTGGTACCTaGCGATGGCCTCAGGCCCATACAGGGGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GVAAHRAHGPGT*RWPQAHTGAAP
Trigger: AGGAGCTGCCCCTGTATGGGCCTGAGGCCATCGCCAGGTACCAGGGCCGTGAGCTCTATGAGCGGCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000648014.1
CDS GCA 72 bp CCCTCACAGATGCTGCACCCTACTCCCCACCCACATTaGTCACCGCCTCAAGGGGCACGGCCCGCATCACCC +
Preference number: 6 (lower is better)
Translates to: PSQMLHPTPHPH*SPPQGARPASP
Trigger: GGGTGATGCGGGCCGTGCCCCTTGAGGCGGTGAGCAATGTGGGTGGGGAGTAGGGTGCAGCATCTGTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS GCA 72 bp TGGAGACAGTCCCTGGGCGCGCCTATCTCACAGAGGTaGTCAGAGTCAATGCCCGTGTCCCCAGGAGCACCA +
Preference number: 6 (lower is better)
Translates to: WRQSLGAPISQR*SESMPVSPGAP
Trigger: TGGTGCTCCTGGGGACACGGGCATTGACTCTGAGCACCTCTGTGAGATAGGCGCGCCCAGGGACTGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 72 bp ATACTCAGGGCCTTCCTCGTCCTCCATCCTGCCGGCTaGAAACACCTTGCCTCACCTTCCTGTGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ILRAFLVLHPAG*KHLASPSCACW
Trigger: CCAGCAGGCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAGGACGAGGAAGGCCCTGAGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CCA 72 bp CCCTGGACCGGTGCTTCATTGCCTTGTAGGCGGCGTTaGCCACAGCATAGAGATGGGGTGGCCGCTCATAGA +
Preference number: 6 (lower is better)
Translates to: PWTGASLPCRRR*PQHRDGVAAHR
Trigger: TCTATGAGCGGCCACCCCATCTCTATGCTGTGGCCAACGCCGCCTACAAGGCAATGAAGCACCGGTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000648014.1
CDS CCA 72 bp GGGCTAGGTGGGGTTGAGTGGGCAGAGAGGGGGAATTaGGGTAGTGATGGAAGGGTCACAAGCTGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GLGGVEWAERGN*GSDGRVTSWSS
Trigger: GCTGGACCAGCTTGTGACCCTTCCATCACTACCCCAATTCCCCCTCTCTGCCCACTCAACCCCACCTAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS CAA 72 bp TCTGTGAACCAGAGGACACAGTGGGCAGGCCACAGTTaGCAAACACACCGCTGGCGTGCCAGGGAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: SVNQRTQWAGHS*QTHRWRARELH
Trigger: GTGGAGCTCCCTGGCACGCCAGCGGTGTGTTTGCAAACTGTGGCCTGCCCACTGTGTCCTCTGGTTCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS GCA 72 bp GTTTGCCATACTCAGGGCCTTCCTCGTCCTCCATCCTaGCGGCTGGAAACACCTTGCCTCACCTTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: VCHTQGLPRPPS*RLETPCLTFLC
Trigger: GCACAGGAAGGTGAGGCAAGGTGTTTCCAGCCGGCAGGATGGAGGACGAGGAAGGCCCTGAGTATGGCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS GCA 72 bp GCCAGCAGCGTGCTGGTTCCTGCTTGTATCGATGTTTaGGACGTGCTGTTTGGGGACCCTCTGCTCCTACCC +
Preference number: 6 (lower is better)
Translates to: ASSVLVPACIDV*DVLFGDPLLLP
Trigger: GGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 72 bp TGGGCGCGCCTATCTCACAGAGGTGCTCAGAGTCAATaGCCGTGTCCCCAGGAGCACCACTTCAGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: WARLSHRGAQSQ*PCPQEHHFSVE
Trigger: CTCAACACTGAAGTGGTGCTCCTGGGGACACGGGCATTGACTCTGAGCACCTCTGTGAGATAGGCGCGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 72 bp CCTACCCCTTGGACTCCACACAGGGACTATGGCCCATaGAGTGATGGGTGTCAGGTGCCAGTACCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: PTPWTPHRDYGP*SDGCQVPVPEQ
Trigger: CTGCTCAGGTACTGGCACCTGACACCCATCACTCCATGGGCCATAGTCCCTGTGTGGAGTCCAAGGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 72 bp CGACGTGCTGTTTGGGGACCCTCTGCTCCTACCCCTTaGACTCCACACAGGGACTATGGCCCATGGAGTGAT +
Preference number: 6 (lower is better)
Translates to: RRAVWGPSAPTP*TPHRDYGPWSD
Trigger: ATCACTCCATGGGCCATAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 72 bp GGGGATCACAGGATGGGACCTTTCACTCTGTGGGCGTaGGAAGCCACTGCAGGATTTTCAGCACGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: GDHRMGPFTLWA*EATAGFSARVP
Trigger: TGGCACCCGTGCTGAAAATCCTGCAGTGGCTTCCCACGCCCACAGAGTGAAAGGTCCCATCCTGTGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 72 bp TCCTTGCTGTCCAACAGGGCCGCCACTGCTCACCTGTaGATGCTAAGCCCTTGCATGTGCTACTGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: SLLSNRAATAHL*MLSPCMCYCLE
Trigger: CTCCAGGCAGTAGCACATGCAAGGGCTTAGCATCCACAGGTGAGCAGTGGCGGCCCTGTTGGACAGCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 72 bp AGGGAGCTCCCACTGCACTGGGGAGCTGAGAGTTGGTaGGGACCATGTCTGTGCTGCAGGGAACTCCTAACT +
Preference number: 6 (lower is better)
Translates to: RELPLHWGAESW*GPCLCCRELLT
Trigger: AGTTAGGAGTTCCCTGCAGCACAGACATGGTCCCCACCAACTCTCAGCTCCCCAGTGCAGTGGGAGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CAA 72 bp GGCCAGCAGCGTGCTGGTTCCTGCTTGTATCGATGTTaGCGACGTGCTGTTTGGGGACCCTCTGCTCCTACC +
Preference number: 6 (lower is better)
Translates to: GQQRAGSCLYRC*RRAVWGPSAPT
Trigger: GGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CAA 90 bp TCCAGGAGAGCGCTCACGGCTGCCTTGTCGGAGCCCAGCAGGTGGTaGGGCCATGTGTATTCACAGGTCATCTTGTACCTGTCACCACAG +
Preference number: 6 (lower is better)
Translates to: SRRALTAALSEPSRW*GHVYSQVILYLSPQ
Trigger: CTGTGGTGACAGGTACAAGATGACCTGTGAATACACATGGCCCAACCACCTGCTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CAA 90 bp GCAGCGTGCTGGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTaGGGGACCCTCTGCTCCTACCCCTTGGACTCCACACAGGGACTA +
Preference number: 6 (lower is better)
Translates to: AACWFLLVSMFATCC*GTLCSYPLDSTQGL
Trigger: TAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CAA 90 bp GAAACACTGTCTGTGAACCAGAGGACACAGTGGGCAGGCCACAGTTaGCAAACACACCGCTGGCGTGCCAGGGAGCTCCACTTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: ETLSVNQRTQWAGHS*QTHRWRARELHFSV
Trigger: GACACTGAAGTGGAGCTCCCTGGCACGCCAGCGGTGTGTTTGCAAACTGTGGCCTGCCCACTGTGTCCTCTGGTTCACAGACAGTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS TCA 72 bp TCACCGCCCTTTCTATTGGGACAGTCATGGGACCCCTaGAACTGTGGGAGACCCAGAGGTAGCCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SPPFLLGQSWDP*NCGRPRGSLAL
Trigger: CAAGGCCAGGCTACCTCTGGGTCTCCCACAGTTTCAGGGGTCCCATGACTGTCCCAATAGAAAGGGCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS GCA 72 bp GATGACGATGCAGGTGTCCCTGGACCGGTGCTTCATTaGCTTGTAGGCGGCGTTGGCCACAGCATAGAGATG +
Preference number: 6 (lower is better)
Translates to: DDDAGVPGPVLH*LVGGVGHSIEM
Trigger: CATCTCTATGCTGTGGCCAACGCCGCCTACAAGGCAATGAAGCACCGGTCCAGGGACACCTGCATCGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000648014.1
CDS GCA 72 bp GCGTGCTGGTTCCTGCTTGTATCGATGTTTGCGACGTaGTGTTTGGGGACCCTCTGCTCCTACCCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: ACWFLLVSMFAT*CLGTLCSYPLD
Trigger: GTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 72 bp GCCCAGAACATTGTGGTGGGTACTCAGGTCCCAGAATaGCCAGGTGGGAGAACCCCAGTTGGGCACAAGTTG +
Preference number: 6 (lower is better)
Translates to: AQNIVVGTQVPE*PGGRTPVGHKL
Trigger: CAACTTGTGCCCAACTGGGGTTCTCCCACCTGGGCATTCTGGGACCTGAGTACCCACCACAATGTTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS GCA 72 bp CTCCAAGTCCCTAGAGACACTGCTCCAGTCATAGGGTaGTCCCAGTTCAGTGGGGGAGTTCGGAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: LQVPRDTAPVIG*SQFSGGVRSLW
Trigger: CCACAGACTCCGAACTCCCCCACTGAACTGGGAGCACCCTATGACTGGAGCAGTGTCTCTAGGGACTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 72 bp CATTGTGGTGGGTACTCAGGTCCCAGAATGCCCAGGTaGGAGAACCCCAGTTGGGCACAAGTTGGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: HCGGYSGPRMPR*ENPSWAQVGRG
Trigger: CCCTCTTCCAACTTGTGCCCAACTGGGGTTCTCCCACCTGGGCATTCTGGGACCTGAGTACCCACCACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 72 bp CCTCAGTGGGGTGTCAAAGCTTGTGGAGACAGTCCCTaGGCGCGCCTATCTCACAGAGGTGCTCAGAGTCAA +
Preference number: 6 (lower is better)
Translates to: PQWGVKACGDSP*ARLSHRGAQSQ
Trigger: TTGACTCTGAGCACCTCTGTGAGATAGGCGCGCCCAGGGACTGTCTCCACAAGCTTTGACACCCCACTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CAA 72 bp CGCAGAGAGCTTCCACCTCATAGGGGAATGGAGAGTTaGTGGAGACATCGCCCATGTCCGAGGGAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: RRELPPHRGMES*WRHRPCPRELP
Trigger: TGGGAGCTCCCTCGGACATGGGCGATGTCTCCACAAACTCTCCATTCCCCTATGAGGTGGAAGCTCTCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS TCA 72 bp AGTGGGGGAGTTCGGAGTCTGTGGAAACACTGTCTGTaGACCAGAGGACACAGTGGGCAGGCCACAGTTTGC +
Preference number: 6 (lower is better)
Translates to: SGGVRSLWKHCL*TRGHSGQATVC
Trigger: GCAAACTGTGGCCTGCCCACTGTGTCCTCTGGTTCACAGACAGTGTTTCCACAGACTCCGAACTCCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS GCA 72 bp GTATCGATGTTTGCGACGTGCTGTTTGGGGACCCTCTaGTCCTACCCCTTGGACTCCACACAGGGACTATGG +
Preference number: 6 (lower is better)
Translates to: VSMFATCCLGTL*SYPLDSTQGLW
Trigger: CCATAGTCCCTGTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 72 bp GTCCCAGACAGCCCTACTTCATGGAAACTCAGAGTCTaGGTGGACACTCCTTGTGTTCCAGAGGGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: VPDSPTSWKLRV*VDTPCVPEGSH
Trigger: GTGGGAGCCCTCTGGAACACAAGGAGTGTCCACGCAGACTCTGAGTTTCCATGAAGTAGGGCTGTCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 72 bp GGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTTaGGGACCCTCTGCTCCTACCCCTTGGACTCCACAC +
Preference number: 6 (lower is better)
Translates to: GSCLYRCLRRAV*GPSAPTPWTPH
Trigger: GTGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CAA 72 bp TGGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGTTaGGGGACCCTCTGCTCCTACCCCTTGGACTCCACA +
Preference number: 6 (lower is better)
Translates to: WFLLVSMFATCC*GTLCSYPLDST
Trigger: TGTGGAGTCCAAGGGGTAGGAGCAGAGGGTCCCCAAACAGCACGTCGCAAACATCGATACAAGCAGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CAA 72 bp CCCAGAGGTAGCCTGGCCTTGATCCCTACCCCCGTCTaGTGGGAAAGAGAATTTATGGGAACAGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PRGSLALIPTPV*WEREFMGTAAA
Trigger: AGCAGCTGCTGTTCCCATAAATTCTCTTTCCCACAAGACGGGGGTAGGGATCAAGGCCAGGCTACCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CAA 90 bp ATGAAGTCCTCCATGGTCACTTGGTCCAAAAGCACAAAGTCAGGTTaGCCATACTCAGGGCCTTCCTCGTCCTCCATCCTGCCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: MKSSMVTWSKSTKSG*PYSGPSSSSILPAG
Trigger: TCCAGCCGGCAGGATGGAGGACGAGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGCTTTTGGACCAAGTGACCATGGAGGACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CAA 90 bp TGTGGGAGACCCAGAGGTAGCCTGGCCTTGATCCCTACCCCCGTCTaGTGGGAAAGAGAATTTATGGGAACAGCAGCTGCTAATGAAGGG +
Preference number: 6 (lower is better)
Translates to: CGRPRGSLALIPTPV*WEREFMGTAAANEG
Trigger: CCCTTCATTAGCAGCTGCTGTTCCCATAAATTCTCTTTCCCACAAGACGGGGGTAGGGATCAAGGCCAGGCTACCTCTGGGTCTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS TCA 72 bp CCTGAAACTGTGGGAGACCCAGAGGTAGCCTGGCCTTaGTCCCTACCCCCGTCTTGTGGGAAAGAGAATTTA +
Preference number: 6 (lower is better)
Translates to: PETVGDPEVAWP*SLPPSCGKENL
Trigger: TAAATTCTCTTTCCCACAAGACGGGGGTAGGGATCAAGGCCAGGCTACCTCTGGGTCTCCCACAGTTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS GCA 72 bp CCATGGTCACTTGGTCCAAAAGCACAAAGTCAGGTTTaGCATACTCAGGGCCTTCCTCGTCCTCCATCCTGC +
Preference number: 6 (lower is better)
Translates to: PWSLGPKAQSQV*HTQGLPRPPSC
Trigger: GCAGGATGGAGGACGAGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGCTTTTGGACCAAGTGACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CCA 72 bp AGAGACACCGCCAGTGTCCCAGACAGCCCTACTTCATaGAAACTCAGAGTCTGCGTGGACACTCCTTGTGTT +
Preference number: 6 (lower is better)
Translates to: RDTASVPDSPTS*KLRVCVDTPCV
Trigger: AACACAAGGAGTGTCCACGCAGACTCTGAGTTTCCATGAAGTAGGGCTGTCTGGGACACTGGCGGTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 72 bp GCCAAACTCCATGGTCTTGTCTGTGGGGCAGAGCTATaGGGACAGGCTGAGGTCAAGGCACAAAAGGTATGT +
Preference number: 6 (lower is better)
Translates to: AKLHGLVCGAEL*GQAEVKAQKVC
Trigger: ACATACCTTTTGTGCCTTGACCTCAGCCTGTCCCCATAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS CAA 72 bp TCCTTGACCCTCTCCACCTCAGCCCTCTGGCTTGGATaGGTGACAGCAGCGATGTACTGCATGATGTGCTTA +
Preference number: 6 (lower is better)
Translates to: SLTLSTSALWLG*VTAAMYCMMCL
Trigger: TAAGCACATCATGCAGTACATCGCTGCTGTCACCAATCCAAGCCAGAGGGCTGAGGTGGAGAGGGTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CAA 72 bp CCCATTTTTCCACCTCCCCTTGCCCTCAGGGCTTACTaGGTAGAAGGCGTGGAAGTTTCTTTCACCCACGTG +
Preference number: 6 (lower is better)
Translates to: PIFPPPLALRAY*VEGVEVSFTHV
Trigger: CACGTGGGTGAAAGAAACTTCCACGCCTTCTACCAAGTAAGCCCTGAGGGCAAGGGGAGGTGGAAAAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480503.5
CDS GCA 72 bp CTTCCCAGATATTTTGGTGTCTTGAGGCCAGCAGCGTaGTGGTTCCTGCTTGTATCGATGTTTGCGACGTGC +
Preference number: 6 (lower is better)
Translates to: LPRYFGVLRPAA*WFLLVSMFATC
Trigger: GCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGCCTCAAGACACCAAAATATCTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS GCA 72 bp ATACGATTTTCTCCAGGACTGATGGTTCTAGATCCTTaGTGTCCAACAGGGCCGCCACTGCTCACCTGTGGA +
Preference number: 6 (lower is better)
Translates to: IRFSPGLMVLDP*CPTGPPLLTCG
Trigger: TCCACAGGTGAGCAGTGGCGGCCCTGTTGGACAGCAAGGATCTAGAACCATCAGTCCTGGAGAAAATCGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CCA 72 bp CCCAGATATTTTGGTGTCTTGAGGCCAGCAGCGTGCTaGTTCCTGCTTGTATCGATGTTTGCGACGTGCTGT +
Preference number: 6 (lower is better)
Translates to: PRYFGVLRPAAC*FLLVSMFATCC
Trigger: ACAGCACGTCGCAAACATCGATACAAGCAGGAACCAGCACGCTGCTGGCCTCAAGACACCAAAATATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 72 bp TCACTGCATTTAAACAACCACGCCGGCTTTGGGCTGTaGCATTACACAGCAAGGCACTCACCGCCCTTTCTA +
Preference number: 6 (lower is better)
Translates to: SLHLNNHAGFGL*HYTARHSPPFL
Trigger: TAGAAAGGGCGGTGAGTGCCTTGCTGTGTAATGCCACAGCCCAAAGCCGGCGTGGTTGTTTAAATGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS CAA 72 bp TCCATGGTCACTTGGTCCAAAAGCACAAAGTCAGGTTaGCCATACTCAGGGCCTTCCTCGTCCTCCATCCTG +
Preference number: 6 (lower is better)
Translates to: SMVTWSKSTKSG*PYSGPSSSSIL
Trigger: CAGGATGGAGGACGAGGAAGGCCCTGAGTATGGCAAACCTGACTTTGTGCTTTTGGACCAAGTGACCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258787.12
ENST00000464434.1
ENST00000480503.5
ENST00000483585.5
ENST00000495831.5
ENST00000648014.1
CDS CAA 72 bp AATACGATTTTCTCCAGGACTGATGGTTCTAGATCCTaGCTGTCCAACAGGGCCGCCACTGCTCACCTGTGG +
Preference number: 6 (lower is better)
Translates to: NTIFSRTDGSRS*LSNRAATAHLW
Trigger: CCACAGGTGAGCAGTGGCGGCCCTGTTGGACAGCAAGGATCTAGAACCATCAGTCCTGGAGAAAATCGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS TCA 72 bp GCTCACACACATGTCTTCCCAGATATTTTGGTGTCTTaGGGCCAGCAGCGTGCTGGTTCCTGCTTGTATCGA +
Preference number: 6 (lower is better)
Translates to: AHTHVFPDILVS*GQQRAGSCLYR
Trigger: TCGATACAAGCAGGAACCAGCACGCTGCTGGCCTCAAGACACCAAAATATCTGGGAAGACATGTGTGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463516.5
ENST00000483585.5
CDS CCA 72 bp AGAGGTAGCCTGGCCTTGATCCCTACCCCCGTCTTGTaGGAAAGAGAATTTATGGGAACAGCAGCTGCTAAT +
Preference number: 6 (lower is better)
Translates to: RGSLALIPTPVL*EREFMGTAAAN
Trigger: ATTAGCAGCTGCTGTTCCCATAAATTCTCTTTCCCACAAGACGGGGGTAGGGATCAAGGCCAGGCTACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463516.5
CDS TCA 72 bp CAGGAGAACAAACAGACTTGCGCTTCCTTCCAGTATTaGACGAACAAACGTGGGGGAAGGTCAGACAGTGTG +
Preference number: 6 (lower is better)
Translates to: QENKQTCASFQY*TNKRGGRSDSV
Trigger: CACACTGTCTGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTCTGTTTGTTCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS GCA 72 bp CCTCATCTGGAGGTGTCTCAGATAAAGGGGACATCCTaGTTTTGTTCCCTGCAAGTCACACCCTCTTGTTTG +
Preference number: 6 (lower is better)
Translates to: PHLEVSQIKGTS*FCSLQVTPSCL
Trigger: CAAACAAGAGGGTGTGACTTGCAGGGAACAAAAGCAGGATGTCCCCTTTATCTGAGACACCTCCAGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CAA 72 bp GCAGGAGAACAAACAGACTTGCGCTTCCTTCCAGTATaGAACGAACAAACGTGGGGGAAGGTCAGACAGTGT +
Preference number: 6 (lower is better)
Translates to: AGEQTDLRFLPV*NEQTWGKVRQC
Trigger: ACACTGTCTGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTCTGTTTGTTCTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CAA 72 bp CCCTGTACACACACACAGGCAGGAGAACAAACAGACTaGCGCTTCCTTCCAGTATTGAACGAACAAACGTGG +
Preference number: 6 (lower is better)
Translates to: PCTHTQAGEQTD*RFLPVLNEQTW
Trigger: CCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTCTGTTTGTTCTCCTGCCTGTGTGTGTGTACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CAA 90 bp CACACACAGGCAGGAGAACAAACAGACTTGCGCTTCCTTCCAGTATaGAACGAACAAACGTGGGGGAAGGTCAGACAGTGTGAACAGTTT +
Preference number: 6 (lower is better)
Translates to: HTQAGEQTDLRFLPV*NEQTWGKVRQCEQF
Trigger: AAACTGTTCACACTGTCTGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTCTGTTTGTTCTCCTGCCTGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CCA 72 bp GACTTGCGCTTCCTTCCAGTATTGAACGAACAAACGTaGGGGAAGGTCAGACAGTGTGAACAGTTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: DLRFLPVLNEQT*GKVRQCEQFLC
Trigger: ACACAGAAACTGTTCACACTGTCTGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480503.5
ENST00000488554.5
CDS CAA 90 bp TTGTACAGCAGCCGCTTGAAGTCCTGGAAGAGGAAATCTCTGTTCTaGTCGATGAAGCCTTCCACGGAGTACCTTAAATCGTTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: LYSSRLKSWKRKSLF*SMKPSTEYLKSFWD
Trigger: ATCCCAAAACGATTTAAGGTACTCCGTGGAAGGCTTCATCGACAAGAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCTGCTGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463516.5