RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO1F (Homo sapiens)

Ensembl gene IDs: ENSG00000142347

Ensembl transcript IDs: ENST00000594774.5, ENST00000594977.6, ENST00000595046.1, ENST00000595191.1, ENST00000595325.5, ENST00000596245.1, ENST00000596645.1, ENST00000596675.1, ENST00000596937.1, ENST00000597222.2, ENST00000598005.2, ENST00000598321.5, ENST00000598529.5, ENST00000598797.1, ENST00000599123.1, ENST00000600825.1, ENST00000600885.1, ENST00000601502.1, ENST00000602136.2, ENST00000613525.4, ENST00000644032.2

Found 554 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCATCCTGGCCGCACAGCCACTCCCCTCGAGTTTGTGGCGAGATaGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCCAT +
Preference number: 1 (lower is better)
Translates to: HHPGRTATPLEFVAR*QFWVRWSGARSSLH
Trigger: ATGGAGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGCTGTGCGGCCAGGATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
3UTR CCA 90 bp ACTGGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTaGCAGGGCCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGG +
Preference number: 1 (lower is better)
Translates to: TGLLGYCSPGKRGSH*QGLAPHQAGRQIGG
Trigger: CCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR GCA 90 bp GGCCTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTaGAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: GLGRTGGQRTGLLGY*SPGKRGSHWQGLAP
Trigger: GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR TCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGCGGGGGCTGCAGCAGTaGCCTGGTGACCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLRGLQQ*PGDPGP
Trigger: AGGCCCTGGGTCACCAGGTCACTGCTGCAGCCCCCG...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CCA 90 bp TTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCGCACAGCCACTCCCCCAGTTCTGGGTAAGATaGAGTGGGGCCCGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: FTSELVHRNTILAAQPLPQFWVR*SGARSS
Trigger: GGAGGACCGGGCCCCACTCCATCTTACCCAGAACTG...GGGGAGTGGCTGTGCGGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602136.2
3UTR-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACTCCCCAACTGTGCCTaGCACTTTGCCAACAGCACA +
Preference number: 2 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLPNCA*HFANST
Trigger: TGTGCTGTTGGCAAAGTGCCAGGCACAGTTGGGGAG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCTCCCCAACTGTGCCTaGCACTTTGCCAACAGCACA +
Preference number: 2 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCLPNCA*HFANST
Trigger: TGTGCTGTTGGCAAAGTGCCAGGCACAGTTGGGGAG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR GCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACGGACTTTTAGGCTATTaGAGCCCAGGTAAACGAGGC +
Preference number: 2 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHGLLGY*SPGKRG
Trigger: GCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTGGAGGCCAAAGGACTaGACTTTTAGGCTATTGCAG +
Preference number: 2 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHWRPKD*TFRLLQ
Trigger: CTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR TCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAAATGGGCAGCAGGTGTaGTGTTGGAGGAAGACCAGG +
Preference number: 2 (lower is better)
Translates to: FANSTGLKTHFLITWQLGNGQQV*CWRKTR
Trigger: CCTGGTCTTCCTCCAACATCACACCTGCTGCCCATT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR TCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTTAGTGATGACAGAATaGGCAAAGTCACGCTTGTTA +
Preference number: 2 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRALVMTE*AKSRLL
Trigger: TAACAAGCGTGACTTTGCTCATTCTGTCATCACTAA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR TCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTTAGTGATGACAGAATaGGCAAAGTCACGCTTGTTA +
Preference number: 2 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHLVMTE*AKSRLL
Trigger: TAACAAGCGTGACTTTGCTCATTCTGTCATCACTAA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGTGGAGGCCAAAGGACTaGACTTTTAGGCTATTGCAG +
Preference number: 2 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLWRPKD*TFRLLQ
Trigger: CTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCA...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR TCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAGCTGTTAGTCCCCTTTaGCACACACAGAAATGGAGA +
Preference number: 2 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAAVSPL*HTQKWR
Trigger: TCTCCATTTCTGTGTGTGTCAAAGGGGACTAACAGC...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAACTCGTGCTTTCACCTaGCAAAGGTTTATTGCCTTA +
Preference number: 2 (lower is better)
Translates to: PAQTGTNSSFMVTYECKATRAFT*QRFIAL
Trigger: TAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGT...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR GCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACTGGCAAAGGTTTATTaGCTTAGTGATGACAGAATG +
Preference number: 2 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALAKVY*LSDDRM
Trigger: CATTCTGTCATCACTAAGGCAATAAACCTTTGCCAG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR CCA 72 bp GGCCGCACAGCCACTCCCCTCGAGTTTGTGGCGAGATaGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCC +
Preference number: 3 (lower is better)
Translates to: GRTATPLEFVAR*QFWVRWSGARS
Trigger: GGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGCTGTGCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
3UTR CCA 72 bp CTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATaGAGTGGGGCCCGGTCCTCCCTCCATCCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: LEFVARWQFWVR*SGARSSLHPLG
Trigger: CCCAAGGGGATGGAGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
3UTR CCA 72 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTaGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: ATPLEFVARWQF*VRWSGARSSLH
Trigger: ATGGAGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
3UTR GCA 72 bp AGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTaGAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: RTGGQRTGLLGY*SPGKRGSHWQG
Trigger: GCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTACTGTGCCTGGCACTTaGCCAACAGCACAGGACTCA +
Preference number: 3 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCTVPGT*PTAQDS
Trigger: TGAGTCCTGTGCTGTTGGCAAAGTGCCAGGCACAGT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CAA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACACTGTGCCTGGCACTTaGCCAACAGCACAGGACTCA +
Preference number: 3 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHTVPGT*PTAQDS
Trigger: TGAGTCCTGTGCTGTTGGCAAAGTGCCAGGCACAGT...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR TCA 72 bp CCAAACTGGGACAAATTCAAGCTTTATGGTCACATATaGATGCAAGGCATGGCTCTGTGCAGTCTTGGGTCA +
Preference number: 3 (lower is better)
Translates to: PNWDKFKLYGHI*MQGMALCSLGS
Trigger: TGACCCAAGACTGCACAGAGCCATGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
3UTR-3UTR CAA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGTTAATCACATGGCAGTaGGGAGGTAGATTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVLITWQ*GGRFCC
Trigger: ACAGCAGAATCTACCTCCCAACTGCCATGTGATTAA...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCTGCTCCCCCGCCCGTaGCGTGCATGGTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQLLPRP*RAWWRT
Trigger: TGTGCGCCACCATGCACGCCACGGGCGGGGGAGCAG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATGGCTCCCAGGGATGTaGACGGAGGGCCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVWLPGM*TEGPGE
Trigger: CTCCCCGGGGCCCTCCGTCCACATCCCTGGGAGCCA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGTGCCCGGGGTCGTCTaGTGGCTCCCAGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVVPGVV*WLPGMW
Trigger: CCACATCCCTGGGAGCCAGCAGACGACCCCGGGCAC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGCCCGAAGCAGGTGCTaGACGCCCTGGCGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVARSRC*TPWRSS
Trigger: GGACGAACGCCAGGGCGTCCAGCACCTGCTTCGGGC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATTGGAGCCGGCGGTGCTaGGGCGCCCCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYWSRRC*GAPSCL
Trigger: GAGACAAGAAGGGGCGCCCCAGCACCGCCGGCTCCA...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACGGCTCTGCGCACCCTaGTGTTCTCCTTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVRLCAP*CSPSGP
Trigger: TGGGCCTGAAGGAGAACATCAGGGTGCGCAGAGCCG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATTTCTGTGTTGTGCTCTaGGGGCGGACGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYFCVVL*GRTCPG
Trigger: CCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAA...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGCCCCCGCCCGTGGCGTaGATGGTGGCGCACACGTCG +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGPPPVA*MVAHTS
Trigger: CGACGTGTGCGCCACCATGCACGCCACGGGCGGGGG...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCCCCCCGCCCGTGGCGTaGATGGTGGCGCACACGTCG +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPPPPVA*MVAHTS
Trigger: CGACGTGTGCGCCACCATGCACGCCACGGGCGGGGG...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
66% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGATCCCCGCCACGAGCTaGAGGACCAGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQIPATS*RTSCWM
Trigger: CATCCAGCAGCTGGTCCTGCAGCTCGTGGCGGGGAT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGGTTCAGGGGGATCTTaGGGGTGGCTTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVGSGGS*GWLGHG
Trigger: GCCATGCCCAAGCCACCCCCAAGATCCCCCTGAACC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCGCCGCCAGGCCTTCTaGATGGTTCGGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQRRQAF*MVRAKP
Trigger: TGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGTGCAGGACCAGCTGCTaGATGCTGGGCGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQCRTSC*MLGGIP
Trigger: TGGGATCCCGCCCAGCATCCAGCAGCTGGTCCTGCA...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGGCATGGCCCTGCTTCTaGCCGTTCACCGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIEAWPCF*PFTGLP
Trigger: CGGGAGTCCGGTGAACGGGCAGAAGCAGGGCCATGC...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATGGGGAGCTGGCTGTTTaGGGCTCTGAGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYGELAV*GSEPEG
Trigger: CCCTTCAGGCTCAGAGCCCCAAACAGCCAGCTCCCC...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613525.4
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGCCCACACCAGGCACTaGCCGTTGCCCCACGCTGCG +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPAHTRH*PLPHAA
Trigger: CGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGAGCCGCGGGAGAAGGTaGCGCTGCGGGTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLSRGRR*RCGCRH
Trigger: GTGGCGGCACCCGCAGCGTCACCTTCTCCCGCGGCT...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCTGGTCAGCTTCTCCTaGAGTCGCCCGCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQLVSFS*SRPLSM
Trigger: CATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCATCCACGCCGCTCTaGTTCACGTTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVSSTPL*FTLWLC
Trigger: GCAGAGCCACAACGTGAAGCAGAGCGGCGTGGATGA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCGCTTCTGTCGTCCGTaGCGTCCACCTGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYRFCRP*RPPGRC
Trigger: ACACCTACCAGGTGGACGGCACGGACGACAGAAGCG...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGGGTTCAGGGGGATCTTaGGGGTGGCTTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIEGSGGS*GWLGHG
Trigger: GCCATGCCCAAGCCACCCCCAAGATCCCCCTGAACC...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACTCTGCTTCACGTTGTaGCTCTGCCAGTGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVLCFTL*LCQWKR
Trigger: GCGCTTCCACTGGCAGAGCCACAACGTGAAGCAGAG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGTTGGTGCTCCCCATCTaGTACTGGTCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQLVLPI*YWSGSM
Trigger: CATGGAGCCCGACCAGTACCAGATGGGGAGCACCAA...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTCTGCTCCCCCGCCCGTaGCGTGCATGGTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGLLPRP*RAWWRT
Trigger: TGTGCGCCACCATGCACGCCACGGGCGGGGGAGCAG...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCTGTTGAAATGCTCGTaGGTCCCCACAGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYLLKCS*VPTAAC
Trigger: GCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAG...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTTGGCTCCCAGGGATGTaGACGGAGGGCCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGWLPGM*TEGPGE
Trigger: CTCCCCGGGGCCCTCCGTCCACATCCCTGGGAGCCA...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGATGCCGGCCATGCCCTaGTCAGGCACGTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQMPAMP*SGTLRN
Trigger: ATTCCTCAACGTGCCTGACCAGGGCATGGCCGGCAT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAGCCGCGGGAGAAGGTaGCGCTGCGGGTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVSRGRR*RCGCRH
Trigger: GTGGCGGCACCCGCAGCGTCACCTTCTCCCGCGGCT...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCAATGGCGTCTTCGGTaGTCTGGGGAAGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQQWRLR*SGEEAP
Trigger: TGGTGCTTCTTCCCCAGATCACCGAAGACGCCATTG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAAGATGTAGTCGTCCATaGAGCGCTTCCGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVRCSRP*SASGGW
Trigger: CCAACCTCCGGAAGCGCTTCATGGACGACTACATCT...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGCTCCCCACCTCGGCTaGACTGGATCTCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVAPHLG*TGSQST
Trigger: AGTACTTTGAGATCCAGTTCAGCCGAGGTGGGGAGC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGAGTAGTCCGGTGTCATaGGGCCCAGGTTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQSSPVS*GPGSAF
Trigger: AAAGGCAGAACCTGGGCCTCATGACACCGGACTACT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGTGGTCTCGTTGGGTTTaGTGCAGCGGATGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQWSRWV*CSGCSG
Trigger: CCCACTACATCCGCTGCATCAAACCCAACGAGACCA...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCGGCGCTCCAGCTGTTaGAATGCTCGTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EFVARWQFWVRWSGARSSRRSSC*NARGSP
Trigger: TGGGGACCCACGAGCATTTCAACAGCTGGAGCGCCG...GGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR TCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGCAGCGTAGTGGTGGATaGCGAAGCCGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGQRSGG*RSRRSS
Trigger: GCTGGAGCGCCGGCTTCGTCATCCACCACTACGCTG...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCCCCCGCCCGTGGCGTaGATGGTGGCGCACACGTCG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCPPPVA*MVAHTS
Trigger: CGACGTGTGCGCCACCATGCACGCCACGGGCGGGGG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGCCGCACAGCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGAAGCCGGAGGTCCCCATaGCTGGGACCACTCACTGCT +
Preference number: 4 (lower is better)
Translates to: GRTATPLEFVARWQFWVRSRRSP*LGPLTA
Trigger: AGCAGTGAGTGGTCCCAGGCATGGGGACCTCCGGCT...TCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGCTGTGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGTGTCCATCTTGCGGCTaGTCAGCTTCTCCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQCPSCG*SASPAV
Trigger: GACTGCAGGAGAAGCTGACCAGCCGCAAGATGGACA...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGGGGGATCTTGGGGGTaGCTTGGGCATGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPGGSWG*LGHGPA
Trigger: AGCAGGGCCATGCCCAAGCCACCCCCAAGATCCCCC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGTTGTGGCTCTGCCAGTaGAAGCGCTCCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIELWLCQ*KRSLLP
Trigger: GGGCAGCAAGGAGCGCTTCCACTGGCAGAGCCACAA...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTGCCCGAAGCAGGTGCTaGACGCCCTGGCGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGARSRC*TPWRSS
Trigger: GGACGAACGCCAGGGCGTCCAGCACCTGCTTCGGGC...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATGCCAGGCCTTCTGGATaGTTCGGGCAAAGCCATCGA +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYARPSG*FGQSHR
Trigger: TCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGC...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTTTCCGGACAGCCACGTaGCGCCGCCAGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGFRTAT*RRQAFW
Trigger: CCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGAA...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAATGCGATCCATGCCTCTaGGGGGCGCAGGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKCDPCL*GAQGPP
Trigger: GGGCGGCCCCTGCGCCCCCCAGAGGCATGGATCGCA...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCTGGGTAAGATGGAGTaGGGCCCGGTCCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPLGKME*GPVLPP
Trigger: TGGAGGGAGGACCGGGCCCCACTCCATCTTACCCAG...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTTCCGAGGCTGGGGCTTaGGTCGGCCCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGSEAGA*VGPHQA
Trigger: TGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGA...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCTCCACGTAGTTTCCTaGGAAAAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYLHVVS*EKALLA
Trigger: GGCCAGGAGGGCCTTTTCCCAGGAAACTACGTGGAG...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACTCCCCAACTGTGCCTaGCACTTTGCCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVLPNCA*HFANST
Trigger: TGTGCTGTTGGCAAAGTGCCAGGCACAGTTGGGGAG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GTTGTCCGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGCAATGGCGTCTTCGGTaGTCTGGGGAAGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: VVREGVDVRGILILGRALQWRLR*SGEEAP
Trigger: TGGTGCTTCTTCCCCAGATCACCGAAGACGCCATTG...CAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACGGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR TCA 90 bp GTTGTCCGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGAGATGTAGTCGTCCATaGAGCGCTTCCGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VVREGVDVRGILILGRALRCSRP*SASGGW
Trigger: CCAACCTCCGGAAGCGCTTCATGGACGACTACATCT...CAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACGGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR TCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCCGGCTCTGCGCACCCTaGTGTTCTCCTTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPRLCAP*CSPSGP
Trigger: TGGGCCTGAAGGAGAACATCAGGGTGCGCAGAGCCG...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTTCTCGCAGAAGCCGCTaGCGTCGTAGGAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPSRRSR*RRRRPC
Trigger: GCAAGGTCTCCTACGACGTCAGCGGCTTCTGCGAGA...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCGGGGGCTGCAGCAGTaGCCTGGTGACCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVRGLQQ*PGDPGP
Trigger: AGGCCCTGGGTCACCAGGTCACTGCTGCAGCCCCCG...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGTCATCCACGCCGCTCTaGTTCACGTTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIESSTPL*FTLWLC
Trigger: GCAGAGCCACAACGTGAAGCAGAGCGGCGTGGATGA...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR GCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGTTGGAGTCCAGCGGATaGCTTCCTGCACATACTCCT +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQLESSG*LPAHTP
Trigger: AGGAGTATGTGCAGGAAGGCATCCGCTGGACTCCAA...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCATCCCCGCCACGAGCTaGAGGACCAGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPIPATS*RTSCWM
Trigger: CATCCAGCAGCTGGTCCTGCAGCTCGTGGCGGGGAT...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGCTCTGCTTCACGTTGTaGCTCTGCCAGTGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIELCFTL*LCQWKR
Trigger: GCGCTTCCACTGGCAGAGCCACAACGTGAAGCAGAG...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCCCAGGTATTCCACCTaGTGCTTGACTCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQPRYST*CLTLFS
Trigger: GGAGAACAGAGTCAAGCACCAGGTGGAATACCTGGG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGGTAGGTCCCCAGCCTTaGCCCAGGGTACGAAGATGT +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIEVGPQP*PRVRRC
Trigger: ACATCTTCGTACCCTGGGCCAAGGCTGGGGACCTAC...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGTTCTGCAGCAGTGTCTaGTCTGCTCCCCCGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGFCSSV*SAPPPV
Trigger: CACGGGCGGGGGAGCAGACCAGACACTGCTGCAGAA...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCTGTTGAAATGCTCGTaGGTCCCCACAGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPLLKCS*VPTAAC
Trigger: GCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAG...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTGGAGGTCCCCATGCCTaGGACCACTCACTGCTCACT +
Preference number: 4 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPGGPHA*DHSLLT
Trigger: AGTGAGCAGTGAGTGGTCCCAGGCATGGGGACCTCC...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGCTCCCTCCATCCCCTTaGGGGGTTGTAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGLPPSP*GVVAGG
Trigger: ACCTCCGGCTACAACCCCCCAAGGGGATGGAGGGAG...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp CTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCCAGTTCTGGGTAAGATaGAGTGGGGCCCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEFVARWQFWVRWSGARSQFWVR*SGARSS
Trigger: GGAGGACCGGGCCCCACTCCATCTTACCCAGAACTG...GGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGCCCACACCAGGCACTaGCCGTTGCCCCACGCTGCG +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVAHTRH*PLPHAA
Trigger: CGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GTTGTCCGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGAGGGGTTTACAGAGATaGGCACAGAGCCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: VVREGVDVRGILILGRALRGLQR*AQSRCR
Trigger: CCTACATCGGCTCTGTGCTCATCTCTGTAAACCCCT...CAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACGGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR TCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGGTACATGTTGTCCGTaGGGGCGTAGATGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPGTCCP*GRRCAG
Trigger: CCCCGCACATCTACGCCCTCACGGACAACATGTACC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQSASAL*GRRRER
Trigger: ACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGA...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCATGGCCCTGCTTCTaGCCGTTCACCGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLAWPCF*PFTGLP
Trigger: CGGGAGTCCGGTGAACGGGCAGAAGCAGGGCCATGC...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACCGCCCGAAGCAGGTaGTGGACGCCCTGGCGTTCG +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKTARSR*WTPWRS
Trigger: CGAACGCCAGGGCGTCCAGCACCTGCTTCGGGCGGT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCAGCGGATGCCTTCCTaGACATACTCCTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PRVCGEMAVLGKMEWGPVQRMPS*TYSSCS
Trigger: CGAGCAGGAGGAGTATGTGCAGGAAGGCATCCGCTG...GACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCAGCAGTGTCTGGTCTaGTCCCCCGCCCGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCQQCLV*SPARGV
Trigger: CACGCCACGGGCGGGGGAGCAGACCAGACACTGCTG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCGCCTGCAGCTTCTaGAGCAGTGTCTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGAACSF*SSVWSA
Trigger: AGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGC...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp GGCCGCACAGCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGACTCCAGCTGTTGAAATaGTCGTGGGTCCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GRTATPLEFVARWQFWVRLQLLK*SWVPTA
Trigger: GGCTGTGGGGACCCACGAGCATTTCAACAGCTGGAG...TCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGCTGTGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACGCCGTTGCCCCACGCTaGGCTTCCTCTGCATGCCGG +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHAVAPR*ASSACR
Trigger: CCGGCATGCAGAGGAAGCGCAGCGTGGGGCAACGGC...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGGGGGATCTTGGGGGTaGCTTGGGCATGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLGGSWG*LGHGPA
Trigger: AGCAGGGCCATGCCCAAGCCACCCCCAAGATCCCCC...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTTGTGGCTCTGCCAGTaGAAGCGCTCCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPLWLCQ*KRSLLP
Trigger: GGGCAGCAAGGAGCGCTTCCACTGGCAGAGCCACAA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTGTCCGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGGCGTCTTCGGTGATCTaGGGAAGAAGCACCATGTCA +
Preference number: 4 (lower is better)
Translates to: VVREGVDVRGILILGRALASSVI*GRSTMS
Trigger: TGACATGGTGCTTCTTCCCCAGATCACCGAAGACGC...CAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACGGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCCACCTCGGCTGAACTaGATCTCAAAGTACTTGCCA +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQPPRLN*ISKYLP
Trigger: TGGCAAGTACTTTGAGATCCAGTTCAGCCGAGGTGG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTTCTGCCTTTGCTCCTaGGAGGCCCCTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPFCLCS*EAPSSS
Trigger: GCTGCTGGAAGGGGCCTCCCAGGAGCAAAGGCAGAA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCTCGGGGGTCAGAATaGCATACCTCTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVSRGSE*HTSAGI
Trigger: AATTCCTGCAGAGGTATGCCATTCTGACCCCCGAGA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACAGGTGCTGGACGCCCTaGCGTTCGTCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHRCWTP*RSSPRH
Trigger: GTGGCGTGGGGACGAACGCCAGGGCGTCCAGCACCT...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAAGGTGCTGGACGCCCTaGCGTTCGTCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKRCWTP*RSSPRH
Trigger: GTGGCGTGGGGACGAACGCCAGGGCGTCCAGCACCT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATGTTCAGCAGGATGTTaGAAGCTTCCTCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVCSAGC*KLPPAS
Trigger: AGATGCGGGAGGAAGCTTCCAACATCCTGCTGAACA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCGCACAGCCACTCCCCCTGCTCCCCCGCCCGTaGCGTGCATGGTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: FTSELVHRNTILAAQPLPLLPRP*RAWWRT
Trigger: TGTGCGCCACCATGCACGCCACGGGCGGGGGAGCAG...GGGGAGTGGCTGTGCGGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCTCCCCTCGAGTTTGTaGCGAGATGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPLPSSL*RDGSSG
Trigger: CCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAG...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATAAGACTTCACACACCTaGCCCTTCTCAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYKTSHT*PFSGPF
Trigger: GAAGGGACCTGAGAAGGGCCAGGTGTGTGAAGTCTT...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGCCATGTGTCCGAGGCTaGGGCTTGGGTCGGCCCACA +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLPCVRG*GLGRPT
Trigger: TGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGG...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTATAGGGCCCGGCACCTaGGACCATGTGTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGIGPGT*DHVSEA
Trigger: AGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTAT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTCTTGGCCCACGTACTaGTATAGGGCCCGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPSWPTY*YRARHL
Trigger: CAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGAGGTGTCCGATTGGTTaGGGTAGTAATAGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQRCPIG*GSNSSP
Trigger: CGGACTACTATTACTACCTCAACCAATCGGACACCT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCAGCTTGTTTTCGATaGGGTCACAGACGACCTTGT +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVSACFR*GHRRPC
Trigger: ACAAGGTCGTCTGTGACCTCATCGAAAACAAGCTGA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCAGCGTAGTGGTGGATaGCGAAGCCGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVQRSGG*RSRRSS
Trigger: GCTGGAGCGCCGGCTTCGTCATCCACCACTACGCTG...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTTCTGTGTTGTGCTCTaGGGGCGGACGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCFCVVL*GRTCPG
Trigger: CCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGCTGTTAGTCCCCTTTaGCACACACAGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVAVSPL*HTQKWR
Trigger: TCTCCATTTCTGTGTGTGTCAAAGGGGACTAACAGC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTCTGATGTTCCCCAGGTaGAAGATCCCCGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGLMFPR*KIPATS
Trigger: GCTCGTGGCGGGGATCTTGCACCTGGGGAACATCAG...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTCTTGGAGCCGGCGGTaGTGGGGCGCCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRASWSRR*WGAPSC
Trigger: ACAAGAAGGGGCGCCCCAGCACCGCCGGCTCCAAGA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGCCTGGGACCACTCACTaGTCACTGGTCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGPGTTH*SLVCIS
Trigger: GCTGATGCAGACCAGTGAGCAGTGAGTGGTCCCAGG...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGGGATCCCAATAACCTaGATAGCACTCAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVGIPIT*IALRVS
Trigger: TGAGACTCTGAGTGCTATGCAGGTTATTGGGATCCC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GATATCTTTGACGTGCTGGACCTTCTCGCCTCCGCCAGACACCTTGGAGATGTAGGGGGATCTTGGGGGTaGCTTGGGCATGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DIFDVLDLLASARHLGDVGGSWG*LGHGPA
Trigger: AGCAGGGCCATGCCCAAGCCACCCCCAAGATCCCCC...TACATCTCCAAGGTGTCTGGCGGAGGCGAGAAGGTCCAGCACGTCAAAGATATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCCTCTGCTTCACGTTGTaGCTCTGCCAGTGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPLCFTL*LCQWKR
Trigger: GCGCTTCCACTGGCAGAGCCACAACGTGAAGCAGAG...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGATATCTTTGACGTGCTaGACCTTCTCGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: REGVDVRGILILGRALIEISLTC*TFSPPP
Trigger: TGGCGGAGGCGAGAAGGTCCAGCACGTCAAAGATAT...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATATGCTGTACTCTTCCTaGGGTTTCTGCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYMLYSS*GFCIAR
Trigger: CCGTGCTATGCAGAAACCCCAGGAAGAGTACAGCAT...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCGACGCTCATGATGCCTaGGGGGCTCAGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: PRVCGEMAVLGKMEWGPVDAHDA*GAQLVF
Trigger: GAAAACAAGCTGAGCCCCCCAGGCATCATGAGCGTC...GACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp CCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCATAGAAACACCATCCTaGCCGCACAGCCACTCCCCT +
Preference number: 4 (lower is better)
Translates to: PRVCGEMAVLGKMEWGPVIETPS*PHSHSP
Trigger: AGGGGAGTGGCTGTGCGGCCAGGATGGTGTTTCTAT...GACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR TCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGCTCCCCACCTCGGCTaGACTGGATCTCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPAPHLG*TGSQST
Trigger: AGTACTTTGAGATCCAGTTCAGCCGAGGTGGGGAGC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTCGACGAAGTTCCGATTaGTGCTGTTGCGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGRRSSD*CCCASA
Trigger: AGCGGAGGCGCAACAGCATCAATCGGAACTTCGTCG...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATTCAGCTTGTTTTCGATaGGGTCACAGACGACCTTGT +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYSACFR*GHRRPC
Trigger: ACAAGGTCGTCTGTGACCTCATCGAAAACAAGCTGA...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACGGCGCTCCAGCTGTTaGAATGCTCGTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKRRSSC*NARGSP
Trigger: TGGGGACCCACGAGCATTTCAACAGCTGGAGCGCCG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCGGCGCTCCAGCTGTTaGAATGCTCGTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCRRSSC*NARGSP
Trigger: TGGGGACCCACGAGCATTTCAACAGCTGGAGCGCCG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTACTCCTGGTCTCACGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCTPGLT*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGTGAGACCAGGAGT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTCTGGTCAGCTTCTCCTaGAGTCGCCCGCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGLVSFS*SRPLSM
Trigger: CATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAG...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAGCCAACCTTGAGCACTaGCAAGTCGCCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKANLEH*QVAEAA
Trigger: CGCGGCTTCGGCGACTTGGCAGTGCTCAAGGTTGGC...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGCCAACCTTGAGCACTaGCAAGTCGCCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVANLEH*QVAEAA
Trigger: CGCGGCTTCGGCGACTTGGCAGTGCTCAAGGTTGGC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGGATCTCAAAGTACTTaGCAAAGCGGCTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVGSQST*QSGWNC
Trigger: ACAATTCCAGCCGCTTTGGCAAGTACTTTGAGATCC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGCGCTTCTGTCGTCCGTaGCGTCCACCTGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLRFCRP*RPPGRC
Trigger: ACACCTACCAGGTGGACGGCACGGACGACAGAAGCG...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACCACCCGCTCCCTCTTaGCCAGGAACTGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKPPAPS*PGTDAA
Trigger: AGCTGCGTCAGTTCCTGGGCAAGAGGGAGCGGGTGG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCCACCCGCTCCCTCTTaGCCAGGAACTGACGCAGCT +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCPPAPS*PGTDAA
Trigger: AGCTGCGTCAGTTCCTGGGCAAGAGGGAGCGGGTGG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGCCGCACAGCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATTGGAGTCCAGCGGATaGCTTCCTGCACATACTCCT +
Preference number: 4 (lower is better)
Translates to: GRTATPLEFVARWQFWVRLESSG*LPAHTP
Trigger: AGGAGTATGTGCAGGAAGGCATCCGCTGGACTCCAA...TCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGCTGTGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCAGGAATTCTGTGTTGTaGTCTGAGGGCGGACGTGCC +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPRNSVL*SEGGRA
Trigger: GGCACGTCCGCCCTCAGAGCACAACACAGAATTCCT...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGGTAGAAACAGGGTTTTaGTGTGTTATCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQVETGF*CVIQAG
Trigger: ACCAGCCTGGATAACACAGCAAAACCCTGTTTCTAC...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGGCATAGAGCCCCTTaGCCAGGGCATCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCGHRAP*PGHHGC
Trigger: ACACCCGTGATGCCCTGGCCAAGGGGCTCTATGCCC...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGGGCATAGAGCCCCTTaGCCAGGGCATCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVGHRAP*PGHHGC
Trigger: ACACCCGTGATGCCCTGGCCAAGGGGCTCTATGCCC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGCCCGGGTAGGGGCTTaGGACGACCTCCGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAARVGA*DDLRGF
Trigger: AAAACCTCGGAGGTCGTCCCAAGCCCCTACCCGGGC...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTAGCGCTTCCGGAGGTTaGCGGCAATGGCGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRASASGG*RQWRLR
Trigger: CCGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCT...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTACCTCTGCAGGAATTTaGCGAACTGGCGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGTSAGI*RTGGGR
Trigger: CCTACCGCCGCCAGTTCGCCAAATTCCTGCAGAGGT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAGAGGAAAAGCGACTCTaGGTTCTTGACAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVEEKRL*VLDKDL
Trigger: AAGGTCTTTGTCAAGAACCCAGAGTCGCTTTTCCTC...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATGCGATCCATGCCTCTaGGGGGCGCAGGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGCDPCL*GAQGPP
Trigger: GGGCGGCCCCTGCGCCCCCCAGAGGCATGGATCGCA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTCCGTGGCGTGCATGGTaGCGCACACGTCGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAPWRAW*RTRRPR
Trigger: TCTTGGACGACGTGTGCGCCACCATGCACGCCACGG...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCCGTGGCGTGCATGGTaGCGCACACGTCGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVPWRAW*RTRRPR
Trigger: TCTTGGACGACGTGTGCGCCACCATGCACGCCACGG...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTTCTGCAGCAGTGTCTaGTCTGCTCCCCCGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHFCSSV*SAPPPV
Trigger: CACGGGCGGGGGAGCAGACCAGACACTGCTGCAGAA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTGCAGGACCAGCTGCTaGATGCTGGGCGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCCRTSC*MLGGIP
Trigger: TGGGATCCCGCCCAGCATCCAGCAGCTGGTCCTGCA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCCTTCTCACTTCCTTTaGCGGGAGGGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCPSHFL*REGPRP
Trigger: TGGCCTCGGCCCCTCCCGCCAAAGGAAGTGAGAAGG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613525.4
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAATAGGGCCCGGCACCTaGGACCATGTGTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKIGPGT*DHVSEA
Trigger: AGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTAT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATGCGCCCAGCCCAAACTaGGACAAATTCAAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYAPSPN*DKFKLY
Trigger: ATAAAGCTTGAATTTGTCCCAGTTTGGGCTGGGCGC...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGTACATGTTGTCCGTaGGGGCGTAGATGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCGTCCP*GRRCAG
Trigger: CCCCGCACATCTACGCCCTCACGGACAACATGTACC...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACGGCGGTCGTACTTGGTaGCCGAATCGGCGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHGGRTW*PNRRSP
Trigger: TGGACTTCGCCGATTCGGTCACCAAGTACGACCGCC...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGGCGGTCGTACTTGGTaGCCGAATCGGCGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVGGRTW*PNRRSP
Trigger: TGGACTTCGCCGATTCGGTCACCAAGTACGACCGCC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCATTCCACCTGGTGCTTaGCTCTGTTCTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPIPPGA*LCSPPS
Trigger: ACTGGGAGGAGAACAGAGTCAAGCACCAGGTGGAAT...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTCATCCTCTTGGAGGATaGAGAAGTCGTCCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGHPLGG*RSRPVA
Trigger: CGCGACAGGACGACTTCTTCATCCTCCAAGAGGATG...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: EFVARWQFWVRWSGARSSSASAL*GRRRER
Trigger: ACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGA...GGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR TCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTCTCGCAGAAGCCGCTaGCGTCGTAGGAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHSRRSR*RRRRPC
Trigger: GCAAGGTCTCCTACGACGTCAGCGGCTTCTGCGAGA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTCTCGCAGAAGCCGCTaGCGTCGTAGGAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRASRRSR*RRRRPC
Trigger: GCAAGGTCTCCTACGACGTCAGCGGCTTCTGCGAGA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACGGGGGCTGCAGCAGTaGCCTGGTGACCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGRGLQQ*PGDPGP
Trigger: AGGCCCTGGGTCACCAGGTCACTGCTGCAGCCCCCG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTAATGGGCAGCAGGTGTaGTGTTGGAGGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGNGQQV*CWRKTR
Trigger: CCTGGTCTTCCTCCAACATCACACCTGCTGCCCATT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCTCTCATTTTCATTTTaGATGACCACGCGGGACTTC +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYLSFSF*MTTRDF
Trigger: GAAGTCCCGCGTGGTCATGCAAAATGAAAATGAGAG...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTGTCCAGCACACCGATaGTGTACTCTTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPCPAHR*CTLPGV
Trigger: AACCCCAGGAAGAGTACAGCATCGGTGTGCTGGACA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTGGATGTAGTGGGGTGTaGACCTCATCAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGGCSGV*TSSVWP
Trigger: TGGCCACACTGATGAGGTGCACACCCCACTACATCC...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTTGGAGTCCAGCGGATaGCTTCCTGCACATACTCCT +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPLESSG*LPAHTP
Trigger: AGGAGTATGTGCAGGAAGGCATCCGCTGGACTCCAA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGCCGCCTGCAGCTTCTaGAGCAGTGTCTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVAACSF*SSVWSA
Trigger: AGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGCACTGCTCACTGGTCTaGATCAGCTCTATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGHCSLV*ISSMRS
Trigger: CGACCTCATAGAGCTGATGCAGACCAGTGAGCAGTG...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGCCAGGCACTGGCCGTTaGCCCACGCTGCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGPGTGR*PTLRFL
Trigger: GAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGG...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGCCAGGCACTGGCCGTTaGCCCACGCTGCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLPGTGR*PTLRFL
Trigger: GAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGG...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATGTAGAAACAGGGTTTTaGTGTGTTATCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYVETGF*CVIQAG
Trigger: ACCAGCCTGGATAACACAGCAAAACCCTGTTTCTAC...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTTGTGGCTCTGCCAGTaGAAGCGCTCCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHLWLCQ*KRSLLP
Trigger: GGGCAGCAAGGAGCGCTTCCACTGGCAGAGCCACAA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTAGATGTGAGCGCTTCCGGAGGTTaGCGGCAATGGCGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LTVDKHVPVHVVREGVDVSASGG*RQWRLR
Trigger: CCGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCT...CACATCTACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACTAATGATGACACACTaGTTCTCACAGTCGATAAGC +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVLMMTH*FSQSIS
Trigger: GCTTATCGACTGTGAGAACCAGTGTGTCATCATTAG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAATTCTGCCTTTGCTCCTaGGAGGCCCCTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKFCLCS*EAPSSS
Trigger: GCTGCTGGAAGGGGCCTCCCAGGAGCAAAGGCAGAA...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGTGGAGCCGGCGGTGCTaGGGCGCCCCTTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLWSRRC*GAPSCL
Trigger: GAGACAAGAAGGGGCGCCCCAGCACCGCCGGCTCCA...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGTTGGTGCTCCCCATCTaGTACTGGTCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLLVLPI*YWSGSM
Trigger: CATGGAGCCCGACCAGTACCAGATGGGGAGCACCAA...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTGTTGAAGTACTGGATTaGAGTCCAGCGGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPVEVLD*SPADAF
Trigger: GAAGGCATCCGCTGGACTCCAATCCAGTACTTCAAC...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp TTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCGCACAGCCACTCCCCCCGTGGCGTGCATGGTaGCGCACACGTCGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FTSELVHRNTILAAQPLPPWRAW*RTRRPR
Trigger: TCTTGGACGACGTGTGCGCCACCATGCACGCCACGG...GGGGAGTGGCTGTGCGGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACTGTTGAAATGCTCGTaGGTCCCCACAGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLLKCS*VPTAAC
Trigger: GCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCCGTCTTCACAGAAACTaGTGTTCCCCAGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPRLHRN*CSPGAR
Trigger: TCTTGCACCTGGGGAACATCAGTTTCTGTGAAGACG...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTAGATGTGGGTACATGTTGTCCGTaGGGGCGTAGATGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LTVDKHVPVHVVREGVDVGTCCP*GRRCAG
Trigger: CCCCGCACATCTACGCCCTCACGGACAACATGTACC...CACATCTACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR TCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGGGTCGGGCTCCATGTTaGCCGCCCGAAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGGRAPC*PPEAGA
Trigger: AGCACCTGCTTCGGGCGGTCAACATGGAGCCCGACC...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCAGACGACCTTGTTGTTaGAGTACTGGATTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PRVCGEMAVLGKMEWGPVRRPCC*STGLES
Trigger: GGACTCCAATCCAGTACTTCAACAACAAGGTCGTCT...GACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAAGCGGCTGTCCATCTTaGGGCTGGTCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKSGCPS*GWSASP
Trigger: AGGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGTTCACGTTGTGGCTCTaGCAGTGGAAGCGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLFTLWL*QWKRSL
Trigger: CAAGGAGCGCTTCCACTGGCAGAGCCACAACGTGAA...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGTCATCCACGCCGCTCTaGTTCACGTTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVSSTPL*FTLWLC
Trigger: GCAGAGCCACAACGTGAAGCAGAGCGGCGTGGATGA...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCAGCGGATGCCTTCCTaGACATACTCCTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCQRMPS*TYSSCS
Trigger: CGAGCAGGAGGAGTATGTGCAGGAAGGCATCCGCTG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCTCCAGCTGTTGAAATaGTCGTGGGTCCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVLQLLK*SWVPTA
Trigger: GGCTGTGGGGACCCACGAGCATTTCAACAGCTGGAG...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACTCCAGCTGTTGAAATaGTCGTGGGTCCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLQLLK*SWVPTA
Trigger: GGCTGTGGGGACCCACGAGCATTTCAACAGCTGGAG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCCTGCTCACTGGTCTaGATCAGCTCTATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLACSLV*ISSMRS
Trigger: CGACCTCATAGAGCTGATGCAGACCAGTGAGCAGGC...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGGACTTTTAGGCTATTaGAGCCCAGGTAAACGAGGC +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPGLLGY*SPGKRG
Trigger: GCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCCCACCTCGGCTGAACTaGATCTCAAAGTACTTGCCA +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPPPRLN*ISKYLP
Trigger: TGGCAAGTACTTTGAGATCCAGTTCAGCCGAGGTGG...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTATATCTTTGACGTGCTaGACCTTCTCGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGISLTC*TFSPPP
Trigger: TGGCGGAGGCGAGAAGGTCCAGCACGTCAAAGATAT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACACCTCTGCAGGAATTTaGCGAACTGGCGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHTSAGI*RTGGGR
Trigger: CCTACCGCCGCCAGTTCGCCAAATTCCTGCAGAGGT...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTACTCCCCGCAGAGCCTaGATGTCCACTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGTPRRA*MSTFFF
Trigger: GAAGAAGAAAGTGGACATCCAGGCTCTGCGGGGAGT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGTTGAAGTACTGGATTaGAGTCCAGCGGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPVEVLD*SPADAF
Trigger: GAAGGCATCCGCTGGACTCCAATCCAGTACTTCAAC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACATGCCGGCCATGCCCTaGTCAGGCACGTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHMPAMP*SGTLRN
Trigger: ATTCCTCAACGTGCCTGACCAGGGCATGGCCGGCAT...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGTTCCACCTGTAAGATaGGGTCCTTCACAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPVPPVR*GPSQLL
Trigger: TAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTGGTTCTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTACTCCTGAATGGGTCGTaGTGGAGGTGCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVLTVDKHVPVHVVREGVLLNGS*WRCRFR
Trigger: CCTGAACCTGCACCTCCATCACGACCCATTCAGGAG...TACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAGAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR TCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACCAATGGCGTCTTCGGTaGTCTGGGGAAGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHQWRLR*SGEEAP
Trigger: TGGTGCTTCTTCCCCAGATCACCGAAGACGCCATTG...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGTGGTCTCGTTGGGTTTaGTGCAGCGGATGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVWSRWV*CSGCSG
Trigger: CCCACTACATCCGCTGCATCAAACCCAACGAGACCA...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGGTCGGGCTCCATGTTaGCCGCCCGAAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGGRAPC*PPEAGA
Trigger: AGCACCTGCTTCGGGCGGTCAACATGGAGCCCGACC...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCGACTCTGGGTTCTTaGCAAAGACCTTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCATLGS*QRPWCS
Trigger: GGAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGC...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGTCAGCTTGTTTTCGATaGGGTCACAGACGACCTTGT +
Preference number: 4 (lower is better)
Translates to: ATPLEFVARWQFWVRWSGSACFR*GHRRPC
Trigger: ACAAGGTCGTCTGTGACCTCATCGAAAACAAGCTGA...CCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGCATGGCCCTGCTTCTaGCCGTTCACCGGACTCCCG +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGAWPCF*PFTGLP
Trigger: CGGGAGTCCGGTGAACGGGCAGAAGCAGGGCCATGC...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAATTCACGTTGTGGCTCTaGCAGTGGAAGCGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKFTLWL*QWKRSL
Trigger: CAAGGAGCGCTTCCACTGGCAGAGCCACAACGTGAA...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGTCTTCCTGGGGTTTCTaGATAGCACGGTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLSSWGF*IARLMA
Trigger: GGCCATCAACCGTGCTATGCAGAAACCCCAGGAAGA...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACGGATGTAGTGGGGTGTaGACCTCATCAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHGCSGV*TSSVWP
Trigger: TGGCCACACTGATGAGGTGCACACCCCACTACATCC...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTAGGTATTCCACCTGGTaGTTGACTCTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGRYSTW*LTLFSS
Trigger: GGAGGAGAACAGAGTCAAGCACCAGGTGGAATACCT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCAGAATGGCATACCTCTaGAGGAATTTGGCGAACTGG +
Preference number: 4 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPRMAYL*RNLANW
Trigger: CCAGTTCGCCAAATTCCTGCAGAGGTATGCCATTCT...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGCTGTGCCTGGCACTTTaGCAACAGCACAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLLCLAL*QQHRTQ
Trigger: TTGAGTCCTGTGCTGTTGGCAAAGTGCCAGGCACAG...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGGGTTCAGGGGGATCTTaGGGGTGGCTTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLGSGGS*GWLGHG
Trigger: GCCATGCCCAAGCCACCCCCAAGATCCCCCTGAACC...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGCGCCGCCAGGCCTTCTaGATGGTTCGGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGRRQAF*MVRAKP
Trigger: TGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCG...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACGACGCTCATGATGCCTaGGGGGCTCAGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHDAHDA*GAQLVF
Trigger: GAAAACAAGCTGAGCCCCCCAGGCATCATGAGCGTC...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGTTCTGCAGCAGTGTCTaGTCTGCTCCCCCGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLFCSSV*SAPPPV
Trigger: CACGGGCGGGGGAGCAGACCAGACACTGCTGCAGAA...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTAGGGGTTTACAGAGATaGGCACAGAGCCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCRGLQR*AQSRCR
Trigger: CCTACATCGGCTCTGTGCTCATCTCTGTAAACCCCT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACATTCCACCTGGTGCTTaGCTCTGTTCTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHIPPGA*LCSPPS
Trigger: ACTGGGAGGAGAACAGAGTCAAGCACCAGGTGGAAT...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTAGATGTGTTCACGTTGTGGCTCTaGCAGTGGAAGCGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LTVDKHVPVHVVREGVDVFTLWL*QWKRSL
Trigger: CAAGGAGCGCTTCCACTGGCAGAGCCACAACGTGAA...CACATCTACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR GCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTGTCCAGCACACCGATaGTGTACTCTTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHCPAHR*CTLPGV
Trigger: AACCCCAGGAAGAGTACAGCATCGGTGTGCTGGACA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCATCTTGGAGCCGGCGGTaGTGGGGCGCCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKASWSRR*WGAPSC
Trigger: ACAAGAAGGGGCGCCCCAGCACCGCCGGCTCCAAGA...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ACTCTGGAGTTACTTTTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCCAGCAGTGTCTGGTCTaGTCCCCCGCCCGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: TLELLFTSELVHRNTILAQQCLV*SPARGV
Trigger: CACGCCACGGGCGGGGGAGCAGACCAGACACTGCTG...GGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAAAAGTAACTCCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR GCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGGCCGCCTGCAGCTTCTaGAGCAGTGTCTGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGAACSF*SSVWSA
Trigger: AGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGC...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGGTGCCCGGGGTCGTCTaGTGGCTCCCAGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVVPGVV*WLPGMW
Trigger: CCACATCCCTGGGAGCCAGCAGACGACCCCGGGCAC...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACTGTGCCTGGCACTTTaGCAACAGCACAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLCLAL*QQHRTQ
Trigger: TTGAGTCCTGTGCTGTTGGCAAAGTGCCAGGCACAG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGCGTCTTCGGTGATCTaGGGAAGAAGCACCATGTCA +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVASSVI*GRSTMS
Trigger: TGACATGGTGCTTCTTCCCCAGATCACCGAAGACGC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACTCCCCGCAGAGCCTaGATGTCCACTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKTPRRA*MSTFFF
Trigger: GAAGAAGAAAGTGGACATCCAGGCTCTGCGGGGAGT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACCATGTGTCCGAGGCTaGGGCTTGGGTCGGCCCACA +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAPCVRG*GLGRPT
Trigger: TGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGTCTTGGCCCACGTACTaGTATAGGGCCCGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGSWPTY*YRARHL
Trigger: CAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGA...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACAAATTCAAGCTTTATaGTCACATATGAATGCAAGG +
Preference number: 4 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVQIQAL*SHMNAR
Trigger: CCTTGCATTCATATGTGACCATAAAGCTTGAATTTG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACCGTCTTCACAGAAACTaGTGTTCCCCAGGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHRLHRN*CSPGAR
Trigger: TCTTGCACCTGGGGAACATCAGTTTCTGTGAAGACG...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGT +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRASASAL*GRRRER
Trigger: ACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGCAGCGTAGTGGTGGATaGCGAAGCCGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVQRSGG*RSRRSS
Trigger: GCTGGAGCGCCGGCTTCGTCATCCACCACTACGCTG...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCAGTGAACCTCTCTaGACCTCCATTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAVSEPL*TSIVPP
Trigger: AGGTGGAACAATGGAGGTTCAGAGAGGTTCACTGAC...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAACTCCTGGTCTCACGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKATPGLT*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGTGAGACCAGGAGT...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTCTCTCATTTTCATTTTaGATGACCACGCGGGACTTC +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGLSFSF*MTTRDF
Trigger: GAAGTCCCGCGTGGTCATGCAAAATGAAAATGAGAG...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGGGATCCCAATAACCTaGATAGCACTCAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLGIPIT*IALRVS
Trigger: TGAGACTCTGAGTGCTATGCAGGTTATTGGGATCCC...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGGACTTTTAGGCTATTaGAGCCCAGGTAAACGAGGC +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAGLLGY*SPGKRG
Trigger: GCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGTGGTCTCACGTGATCTaGCCGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLWSHVI*PPQPPK
Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGTGAGACCA...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAAGCGCTTCCGGAGGTTaGCGGCAATGGCGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKASASGG*RQWRLR
Trigger: CCGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCT...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTCTCCAGCAAGAAGTTaGAGATCTTGCCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCSPARS*RSCPHL
Trigger: CAGATGGGGGCAAGATCTCCAACTTCTTGCTGGAGA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTCTCCAGCAAGAAGTTaGAGATCTTGCCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHSPARS*RSCPHL
Trigger: CAGATGGGGGCAAGATCTCCAACTTCTTGCTGGAGA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTCTCGGGGGTCAGAATaGCATACCTCTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHSRGSE*HTSAGI
Trigger: AATTCCTGCAGAGGTATGCCATTCTGACCCCCGAGA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCGTAATCCCAGCACTCTaGAGTTACTTTTTACATCAG +
Preference number: 4 (lower is better)
Translates to: LEFVARWQFWVRWSGARSVIPAL*SYFLHQ
Trigger: CTGATGTAAAAAGTAACTCCAGAGTGCTGGGATTAC...GGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTCACATACACACACTTaGGCGTCAGGATCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRASHTHT*ASGSSP
Trigger: GGGACTTGATCCTGACGCCCAAGTGTGTGTATGTGA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGAGATGTAGTCGTCCATaGAGCGCTTCCGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLRCSRP*SASGGW
Trigger: CCAACCTCCGGAAGCGCTTCATGGACGACTACATCT...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAAGGTGTCCGATTGGTTaGGGTAGTAATAGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKRCPIG*GSNSSP
Trigger: CGGACTACTATTACTACCTCAACCAATCGGACACCT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGGCGACTCTGGGTTCTTaGCAAAGACCTTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLATLGS*QRPWCS
Trigger: GGAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGC...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTAGACGACCTTGTTGTTaGAGTACTGGATTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCRRPCC*STGLES
Trigger: GGACTCCAATCCAGTACTTCAACAACAAGGTCGTCT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAATGGGCAGCAGGTGTaGTGTTGGAGGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGNGQQV*CWRKTR
Trigger: CCTGGTCTTCCTCCAACATCACACCTGCTGCCCATT...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGGCTGTTAGTCCCCTTTaGCACACACAGAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVAVSPL*HTQKWR
Trigger: TCTCCATTTCTGTGTGTGTCAAAGGGGACTAACAGC...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACTGATGTTCCCCAGGTaGAAGATCCCCGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALMFPR*KIPATS
Trigger: GCTCGTGGCGGGGATCTTGCACCTGGGGAACATCAG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAGAATGGCATACCTCTaGAGGAATTTGGCGAACTGG +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVRMAYL*RNLANW
Trigger: CCAGTTCGCCAAATTCCTGCAGAGGTATGCCATTCT...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACAGCGGATGCCTTCCTaGACATACTCCTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGQRMPS*TYSSCS
Trigger: CGAGCAGGAGGAGTATGTGCAGGAAGGCATCCGCTG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGGCCTGCTCACTGGTCTaGATCAGCTCTATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGACSLV*ISSMRS
Trigger: CGACCTCATAGAGCTGATGCAGACCAGTGAGCAGGC...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGGCCCGGGTAGGGGCTTaGGACGACCTCCGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVARVGA*DDLRGF
Trigger: AAAACCTCGGAGGTCGTCCCAAGCCCCTACCCGGGC...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGGACGCTCATGATGCCTaGGGGGCTCAGCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGDAHDA*GAQLVF
Trigger: GAAAACAAGCTGAGCCCCCCAGGCATCATGAGCGTC...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCGCACAGCCACTCCCCGAGTTTGTGGCGAGATaGCAGTTCTGGGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: FTSELVHRNTILAAQPLPEFVAR*QFWVRW
Trigger: CCATCTTACCCAGAACTGCCATCTCGCCACAAACTC...GGGGAGTGGCTGTGCGGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CCA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTGGAGGCCAAAGGACTaGACTTTTAGGCTATTGCAG +
Preference number: 4 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCWRPKD*TFRLLQ
Trigger: CTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTGGAGGCCAAAGGACTaGACTTTTAGGCTATTGCAG +
Preference number: 4 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAWRPKD*TFRLLQ
Trigger: CTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTACTCGTGCTTTCACCTaGCAAAGGTTTATTGCCTTA +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGTRAFT*QRFIAL
Trigger: TAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGT...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACGCGCCCAGCCCAAACTaGGACAAATTCAAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHAPSPN*DKFKLY
Trigger: ATAAAGCTTGAATTTGTCCCAGTTTGGGCTGGGCGC...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGGGGTTTACAGAGATaGGCACAGAGCCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGRGLQR*AQSRCR
Trigger: CCTACATCGGCTCTGTGCTCATCTCTGTAAACCCCT...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGCCTGGTCAGGCACGTTaGGGAATTCTGTGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGPGQAR*GILCCA
Trigger: AGCACAACACAGAATTCCTCAACGTGCCTGACCAGG...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACTTTATGGTCACATATaGATGCAAGGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLYGHI*MQGMAL
Trigger: CAGAGCCATGCCTTGCATTCATATGTGACCATAAAG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTTCGATAAAGATTTGCTaGAGCTTCTCATTGACGAAG +
Preference number: 4 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGSIKIC*SFSLTK
Trigger: CTTCGTCAATGAGAAGCTGCAGCAAATCTTTATCGA...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGCTAATGATGACACACTaGTTCTCACAGTCGATAAGC +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLLMMTH*FSQSIS
Trigger: GCTTATCGACTGTGAGAACCAGTGTGTCATCATTAG...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAGCCAGGCCTTCTGGATaGTTCGGGCAAAGCCATCGA +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAARPSG*FGQSHR
Trigger: TCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGC...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACTCCACGTAGTTTCCTaGGAAAAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALHVVS*EKALLA
Trigger: GGCCAGGAGGGCCTTTTCCCAGGAAACTACGTGGAG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGCGACGAAGTTCCGATTaGTGCTGTTGCGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVRRSSD*CCCASA
Trigger: AGCGGAGGCGCAACAGCATCAATCGGAACTTCGTCG...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACATCCTCTTGGAGGATaGAGAAGTCGTCCTGTCGCG +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAHPLGG*RSRPVA
Trigger: CGCGACAGGACGACTTCTTCATCCTCCAAGAGGATG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGGTCAGTGAACCTCTCTaGACCTCCATTGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLVSEPL*TSIVPP
Trigger: AGGTGGAACAATGGAGGTTCAGAGAGGTTCACTGAC...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATCTTCCTGGGGTTTCTaGATAGCACGGTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGSSWGF*IARLMA
Trigger: GGCCATCAACCGTGCTATGCAGAAACCCCAGGAAGA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGTCGATAAAGATTTGCTaGAGCTTCTCATTGACGAAG +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLSIKIC*SFSLTK
Trigger: CTTCGTCAATGAGAAGCTGCAGCAAATCTTTATCGA...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGTGGTCTCACGTGATCTaGCCGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVWSHVI*PPQPPK
Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGTGAGACCA...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAATATCTTTGACGTGCTaGACCTTCTCGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGISLTC*TFSPPP
Trigger: TGGCGGAGGCGAGAAGGTCCAGCACGTCAAAGATAT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATGCTGTACTCTTCCTaGGGTTTCTGCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGMLYSS*GFCIAR
Trigger: CCGTGCTATGCAGAAACCCCAGGAAGAGTACAGCAT...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACCCAGGTATTCCACCTaGTGCTTGACTCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGPRYST*CLTLFS
Trigger: GGAGAACAGAGTCAAGCACCAGGTGGAATACCTGGG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCATCGGCGGCATCCTCTTaGAGGATGAAGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKASAASS*RMKKSS
Trigger: GGACGACTTCTTCATCCTCCAAGAGGATGCCGCCGA...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGGTTGAAGTACTGGATTaGAGTCCAGCGGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGVEVLD*SPADAF
Trigger: GAAGGCATCCGCTGGACTCCAATCCAGTACTTCAAC...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAAAGACTTCACACACCTaGCCCTTCTCAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGKTSHT*PFSGPF
Trigger: GAAGGGACCTGAGAAGGGCCAGGTGTGTGAAGTCTT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGCATTTTCATTTTGCATaGCCACGCGGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLHFHFA*PRGTSP
Trigger: TGGAGAAGTCCCGCGTGGTCATGCAAAATGAAAATG...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGAGTAGTCCGGTGTCATaGGGCCCAGGTTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVSSPVS*GPGSAF
Trigger: AAAGGCAGAACCTGGGCCTCATGACACCGGACTACT...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGAGACGACCTTGTTGTTaGAGTACTGGATTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLRRPCC*STGLES
Trigger: GGACTCCAATCCAGTACTTCAACAACAAGGTCGTCT...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGTTAGTGATGACAGAATaGGCAAAGTCACGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVLVMTE*AKSRLL
Trigger: TAACAAGCGTGACTTTGCTCATTCTGTCATCACTAA...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAAGGTATTCCACCTGGTaGTTGACTCTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGRYSTW*LTLFSS
Trigger: GGAGGAGAACAGAGTCAAGCACCAGGTGGAATACCT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACTGGCAAAGGTTTATTaGCTTAGTGATGACAGAATG +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLAKVY*LSDDRM
Trigger: CATTCTGTCATCACTAAGGCAATAAACCTTTGCCAG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCTGGCAAAGGTTTATTaGCTTAGTGATGACAGAATG +
Preference number: 4 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVLAKVY*LSDDRM
Trigger: CATTCTGTCATCACTAAGGCAATAAACCTTTGCCAG...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTGGTTCTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTACTAATGATGACACACTaGTTCTCACAGTCGATAAGC +
Preference number: 4 (lower is better)
Translates to: LVLTVDKHVPVHVVREGVLMMTH*FSQSIS
Trigger: GCTTATCGACTGTGAGAACCAGTGTGTCATCATTAG...TACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAGAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATGTTCAGCAGGATGTTaGAAGCTTCCTCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGCSAGC*KLPPAS
Trigger: AGATGCGGGAGGAAGCTTCCAACATCCTGCTGAACA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGTCGGCGGCATCCTCTTaGAGGATGAAGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVSAASS*RMKKSS
Trigger: GGACGACTTCTTCATCCTCCAAGAGGATGCCGCCGA...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATCACATACACACACTTaGGCGTCAGGATCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGSHTHT*ASGSSP
Trigger: GGGACTTGATCCTGACGCCCAAGTGTGTGTATGTGA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGCTCCCCAACTGTGCCTaGCACTTTGCCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVLPNCA*HFANST
Trigger: TGTGCTGTTGGCAAAGTGCCAGGCACAGTTGGGGAG...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGAAACATCGTCCTTGTTaGGCACTTAGTAAGTTAACT +
Preference number: 4 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLKHRPC*ALSKLT
Trigger: AGTTAACTTACTAAGTGCCCAACAAGGACGATGTTT...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGTTCCACCTGTAAGATaGGGTCCTTCACAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGVPPVR*GPSQLL
Trigger: TAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGGCGTCTTCGGTGATCTaGGGAAGAAGCACCATGTCA +
Preference number: 4 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVASSVI*GRSTMS
Trigger: TGACATGGTGCTTCTTCCCCAGATCACCGAAGACGC...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGGAGGAAAAGCGACTCTaGGTTCTTGACAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGEEKRL*VLDKDL
Trigger: AAGGTCTTTGTCAAGAACCCAGAGTCGCTTTTCCTC...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAAAACATCGTCCTTGTTaGGCACTTAGTAAGTTAACT +
Preference number: 4 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKKHRPC*ALSKLT
Trigger: AGTTAACTTACTAAGTGCCCAACAAGGACGATGTTT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACATTTTCATTTTGCATaGCCACGCGGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAHFHFA*PRGTSP
Trigger: TGGAGAAGTCCCGCGTGGTCATGCAAAATGAAAATG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACTTTATGGTCACATATaGATGCAAGGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGLYGHI*MQGMAL
Trigger: CAGAGCCATGCCTTGCATTCATATGTGACCATAAAG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR GCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGGATCTCAAAGTACTTaGCAAAGCGGCTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGGSQST*QSGWNC
Trigger: ACAATTCCAGCCGCTTTGGCAAGTACTTTGAGATCC...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGACTCGTGCTTTCACCTaGCAAAGGTTTATTGCCTTA +
Preference number: 4 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLTRAFT*QRFIAL
Trigger: TAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGT...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR TCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATTAGTGATGACAGAATaGGCAAAGTCACGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGLVMTE*AKSRLL
Trigger: TAACAAGCGTGACTTTGCTCATTCTGTCATCACTAA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACAAATTCAAGCTTTATaGTCACATATGAATGCAAGG +
Preference number: 4 (lower is better)
Translates to: FANSTGLKTHFLITWQLGQIQAL*SHMNAR
Trigger: CCTTGCATTCATATGTGACCATAAAGCTTGAATTTG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CCA 90 bp ACTCTGGAGTTACTTTTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCTTGTACATTTTAAAATaGTTAATAAGGCCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: TLELLFTSELVHRNTILALYILK*LIRPGA
Trigger: CGCACCCGGCCTTATTAACCATTTTAAAATGTACAA...GGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAAAAGTAACTCCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS GCA 90 bp GTCCGAGGCTGGGGCTTGGGTCGGCCCACACCAGGCACTGGCCGTTaGCCCACGCTGCGCTTCCTCTGCATGCCGGCCATGCCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: VRGWGLGRPTPGTGR*PTLRFLCMPAMPWS
Trigger: TGACCAGGGCATGGCCGGCATGCAGAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp GGTATAGGGCCCGGCACCTGGGACCATGTGTCCGAGGCTGGGGCTTaGGTCGGCCCACACCAGGCACTGGCCGTTGCCCCACGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: GIGPGTWDHVSEAGA*VGPHQALAVAPRCA
Trigger: AGCGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTATACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp ACCATGTGTCCGAGGCTGGGGCTTGGGTCGGCCCACACCAGGCACTaGCCGTTGCCCCACGCTGCGCTTCCTCTGCATGCCGGCCATGCC +
Preference number: 5 (lower is better)
Translates to: TMCPRLGLGSAHTRH*PLPHAALPLHAGHA
Trigger: GGCATGGCCGGCATGCAGAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp ATCGCCCACGCTGACCGTGAGGGTCCGACCGCCAACCTTGAGCACTaGCAAGTCGCCGAAGCCGCGGGAGAAGGTGACGCTGCGGGTGCC +
Preference number: 5 (lower is better)
Translates to: IAHADREGPTANLEH*QVAEAAGEGDAAGA
Trigger: GGCACCCGCAGCGTCACCTTCTCCCGCGGCTTCGGCGACTTGGCAGTGCTCAAGGTTGGCGGTCGGACCCTCACGGTCAGCGTGGGCGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000596245.1
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp CCGGCGCTCCAGCTGTTGAAATGCTCGTGGGTCCCCACAGCCGCCTaGAGCTTCTGCAGCAGTGTCTGGTCTGCTCCCCCGCCCGTGGCG +
Preference number: 5 (lower is better)
Translates to: PALQLLKCSWVPTAA*SFCSSVWSAPPPVA
Trigger: CGCCACGGGCGGGGGAGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAGCTGGAGCGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000601502.1
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp ACGTACTGGTATAGGGCCCGGCACCTGGGACCATGTGTCCGAGGCTaGGGCTTGGGTCGGCCCACACCAGGCACTGGCCGTTGCCCCACG +
Preference number: 5 (lower is better)
Translates to: TYWYRARHLGPCVRG*GLGRPTPGTGRCPT
Trigger: CGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTATACCAGTACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp GCTCGTCCACATCTTGGCCCACGTACTGGTATAGGGCCCGGCACCTaGGACCATGTGTCCGAGGCTGGGGCTTGGGTCGGCCCACACCAG +
Preference number: 5 (lower is better)
Translates to: ARPHLGPRTGIGPGT*DHVSEAGAWVGPHQ
Trigger: CTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGATGTGGACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCCCTTCCGCGTAGGCTaGGAGCTCTTGGGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQPFRVG*ELLGSP
Trigger: TGGGCTGCCCAAGAGCTCCAAGCCTACGCGGAAGGG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp CGCTGCGCTTCCTCTGCATGCCGGCCATGCCCTGGTCAGGCACGTTaGGGAATTCTGTGTTGTGCTCTGAGGGCGGACGTGCCCGGGGTC +
Preference number: 5 (lower is better)
Translates to: RCASSACRPCPGQAR*GILCCALRADVPGV
Trigger: GACCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAACGTGCCTGACCAGGGCATGGCCGGCATGCAGAGGAAGCGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp CAGCTGTTGAAATGCTCGTGGGTCCCCACAGCCGCCTGCAGCTTCTaGAGCAGTGTCTGGTCTGCTCCCCCGCCCGTGGCGTGCATGGTG +
Preference number: 5 (lower is better)
Translates to: QLLKCSWVPTAACSF*SSVWSAPPPVACMV
Trigger: CACCATGCACGCCACGGGCGGGGGAGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000601502.1
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp ATGCCGGCCATGCCCTGGTCAGGCACGTTGAGGAATTCTGTGTTGTaGTCTGAGGGCGGACGTGCCCGGGGTCGTCTGCTGGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: MPAMPWSGTLRNSVL*SEGGRARGRLLAPR
Trigger: CCTGGGAGCCAGCAGACGACCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAACGTGCCTGACCAGGGCATGGCCGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACAGCGGCTGTCCATCTaGCGGCTGGTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVQRLSI*RLVSFS
Trigger: GGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCTG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGAGGTTCAGGGGGATCTaGGGGGTGGCTTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQRFRGI*GVAWAW
Trigger: CCATGCCCAAGCCACCCCCAAGATCCCCCTGAACCT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTAAAGCGCTTCCGGAGGTaGGCGGCAATGGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVKRFRR*AAMASS
Trigger: CGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCTT...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp CAAAGACCTTGGTGCTCCCCATCTGGTACTGGTCGGGCTCCATGTTaGCCGCCCGAAGCAGGTGCTGGACGCCCTGGCGTTCGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: QRPWCSPSGTGRAPC*PPEAGAGRPGVRPH
Trigger: GTGGGGACGAACGCCAGGGCGTCCAGCACCTGCTTCGGGCGGTCAACATGGAGCCCGACCAGTACCAGATGGGGAGCACCAAGGTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp GGCCATGCCCTGGTCAGGCACGTTGAGGAATTCTGTGTTGTGCTCTaGGGGCGGACGTGCCCGGGGTCGTCTGCTGGCTCCCAGGGATGT +
Preference number: 5 (lower is better)
Translates to: GHALVRHVEEFCVVL*GRTCPGSSAGSQGC
Trigger: ACATCCCTGGGAGCCAGCAGACGACCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAACGTGCCTGACCAGGGCATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp TCTGGGGCTGAGGTCTGCCTGGCCGGGGACTGGAGTAGAGGCCGGTaGTCACCAGAGTCTCACCAAAGTCGCTTCTGTCGTCCGTGCCGT +
Preference number: 5 (lower is better)
Translates to: SGAEVCLAGDWSRGR*SPESHQSRFCRPCR
Trigger: ACGGCACGGACGACAGAAGCGACTTTGGTGAGACTCTGGTGAGCACCGGCCTCTACTCCAGTCCCCGGCCAGGCAGACCTCAGCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595325.5
ENST00000598529.5
CDS GCA 90 bp AAGGGATGCCCACCAAAGGGTGGCATGGACGTATTCAGCCTCTCCTaGCTCTGCTGCAGCCATACCGCCCGTCACCGGCACAGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: KGCPPKGGMDVFSLS*LCCSHTARHRHREG
Trigger: GCCCTCCCTGTGCCGGTGACGGGCGGTATGGCTGCAGCAGAGGCAGGAGAGGCTGAATACGTCCATGCCACCCTTTGGTGGGCATCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS-3UTR CAA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGCCGCTCTGCTTCACGTaGTGGCTCTGCCAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQPLCFT*WLCQWK
Trigger: CTTCCACTGGCAGAGCCACAACGTGAAGCAGAGCGG...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTGTCCGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGAAGCGCTTCCGGAGGTaGGCGGCAATGGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VVREGVDVRGILILGRALKRFRR*AAMASS
Trigger: CGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCTT...CAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACGGACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS GCA 90 bp CCATCTTGCGGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTGTCAATaGCCAGCAGGTAGGCGGGAAAGGCCAGGAGGTCCACACTCTCCA +
Preference number: 5 (lower is better)
Translates to: PSCGWSASPAVARCQ*PAGRRERPGGPHSP
Trigger: TGGAGAGTGTGGACCTCCTGGCCTTTCCCGCCTACCTGCTGGGCATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAGCCGCAAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp CCACCAAAGGGTGGCATGGACGTATTCAGCCTCTCCTGCCTCTGCTaGAGCCATACCGCCCGTCACCGGCACAGGGAGGGCGTCAATCCA +
Preference number: 5 (lower is better)
Translates to: PPKGGMDVFSLSCLC*SHTARHRHREGVNP
Trigger: TGGATTGACGCCCTCCCTGTGCCGGTGACGGGCGGTATGGCTGCAGCAGAGGCAGGAGAGGCTGAATACGTCCATGCCACCCTTTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS GCA 90 bp TGCCCACCAAAGGGTGGCATGGACGTATTCAGCCTCTCCTGCCTCTaGTGCAGCCATACCGCCCGTCACCGGCACAGGGAGGGCGTCAAT +
Preference number: 5 (lower is better)
Translates to: CPPKGGMDVFSLSCL*CSHTARHRHREGVN
Trigger: ATTGACGCCCTCCCTGTGCCGGTGACGGGCGGTATGGCTGCAGCAGAGGCAGGAGAGGCTGAATACGTCCATGCCACCCTTTGGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS GCA 90 bp CCATCTTGCGGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTGTCAATaGCCAGCAGGTAGGCGGGAAAGGCCAGGACTACCAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSCGWSASPAVARCQ*PAGRRERPGLPGQR
Trigger: CCTTTGCCCTGGTAGTCCTGGCCTTTCCCGCCTACCTGCTGGGCATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAGCCGCAAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596937.1
CDS CCA 90 bp CCTCGTACTTCCGGACAGCCACGTGGCGCCGCCAGGCCTTCTGGATaGTTCGGGCAAAGCCATCGAACTTTCGCTCTCGCACCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PRTSGQPRGAARPSG*FGQSHRTFALAPPP
Trigger: TGGAGGAGGTGCGAGAGCGAAAGTTCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGAAGTACGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597222.2
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp GGAGGCCCCTTCCAGCAGCTGGAGGGTGTGCCATGTTCATGCATCTaGTGCTTGCCTGGCTCAGCCCCTGTGATCCCTCATCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GGPFQQLEGVPCSCI*CLPGSAPVIPHLPC
Trigger: GCAGGGCAGATGAGGGATCACAGGGGCTGAGCCAGGCAAGCACCAGATGCATGAACATGGCACACCCTCCAGCTGCTGGAAGGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595325.5
CDS GCA 90 bp GGCCCCTTCCAGCAGCTGGAGGGTGTGCCATGTTCATGCATCTGGTaGTTGCCTGGCTCAGCCCCTGTGATCCCTCATCTGCCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GPFQQLEGVPCSCIW*LPGSAPVIPHLPCH
Trigger: ATGGCAGGGCAGATGAGGGATCACAGGGGCTGAGCCAGGCAAGCACCAGATGCATGAACATGGCACACCCTCCAGCTGCTGGAAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595325.5
CDS CCA 90 bp ATCTCCTCGTACTTCCGGACAGCCACGTGGCGCCGCCAGGCCTTCTaGATGGTTCGGGCAAAGCCATCGAACTTTCGCTCTCGCACCTCC +
Preference number: 5 (lower is better)
Translates to: ISSYFRTATWRRQAF*MVRAKPSNFRSRTS
Trigger: GGAGGTGCGAGAGCGAAAGTTCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGAAGTACGAGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597222.2
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp TTGGAAGCTTCCTCCCGCATCTCCTCGTACTTCCGGACAGCCACGTaGCGCCGCCAGGCCTTCTGGATGGTTCGGGCAAAGCCATCGAAC +
Preference number: 5 (lower is better)
Translates to: LEASSRISSYFRTAT*RRQAFWMVRAKPSN
Trigger: GTTCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGAAGTACGAGGAGATGCGGGAGGAAGCTTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597222.2
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp AGGCCCAGGTTCTGCCTTTGCTCCTGGGAGGCCCCTTCCAGCAGCTaGAGGGTGTGCCATGTTCATGCATCTGGTGCTTGCCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RPRFCLCSWEAPSSS*RVCHVHASGACLAQ
Trigger: CTGAGCCAGGCAAGCACCAGATGCATGAACATGGCACACCCTCCAGCTGCTGGAAGGGGCCTCCCAGGAGCAAAGGCAGAACCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595325.5
CDS CCA 90 bp TCGTTCACGTTGAAGCTCAGCTCGTCCACATCTTGGCCCACGTACTaGTATAGGGCCCGGCACCTGGGACCATGTGTCCGAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SFTLKLSSSTSWPTY*YRARHLGPCVRGWG
Trigger: GCCCCAGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGATGTGGACGAGCTGAGCTTCAACGTGAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGTCCGACCGCCAACCTaGAGCACTGCCAAGTCGCCG +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPVRPPT*STAKSP
Trigger: CGGCGACTTGGCAGTGCTCAAGGTTGGCGGTCGGAC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGTAGGCTTGGAGCTCTaGGGCAGCCCATCGCCCACG +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPVGLEL*GSPSPT
Trigger: CGTGGGCGATGGGCTGCCCAAGAGCTCCAAGCCTAC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CGTGAGGGCGTAGATGTGCGGGGGATTCTCATACTGGGCCGCGCCCTGATAGAGCCGCTCTGCTTCACGTaGTGGCTCTGCCAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: REGVDVRGILILGRALIEPLCFT*WLCQWK
Trigger: CTTCCACTGGCAGAGCCACAACGTGAAGCAGAGCGG...CTCTATCAGGGCGCGGCCCAGTATGAGAATCCCCCGCACATCTACGCCCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CAA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTACGCCTCCGCTCCTTCTaGTTCAGCAGGATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVRLRSF*FSRMLE
Trigger: TTCCAACATCCTGCTGAACAAGAAGGAGCGGAGGCG...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATTCCGATTGATGCTGTaGCGCCTCCGCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVFRLML*RLRSFL
Trigger: CAAGAAGGAGCGGAGGCGCAACAGCATCAATCGGAA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCGTTGGCTTGTTTCTaGATCTTGGAGCCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: PGSPPGRQADRRAKEKAVSLACF*ILEPAV
Trigger: CACCGCCGGCTCCAAGATCAAGAAACAAGCCAACGA...TACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp TCCTCTGTGTCACCACTTGGTGCTCTCCCGGCCCATTCCTCCCTCTaGTCCTTCACCCTCCTCTCCGTCCATGGCCCAGCCATTCATTCC +
Preference number: 5 (lower is better)
Translates to: SSVSPLGALPAHSSL*SFTLLSVHGPAIHS
Trigger: GGAATGAATGGCTGGGCCATGGACGGAGAGGAGGGTGAAGGAGCAGAGGGAGGAATGGGCCGGGAGAGCACCAAGTGGTGACACAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596645.1
CDS GCA 90 bp AGGTTCAGGGGGATCTTGGGGGTGGCTTGGGCATGGCCCTGCTTCTaGCCGTTCACCGGACTCCCGGCTTTAGTTCCTCTTACAACAGCC +
Preference number: 5 (lower is better)
Translates to: RFRGILGVAWAWPCF*PFTGLPALVPLTTA
Trigger: GGCTGTTGTAAGAGGAACTAAAGCCGGGAGTCCGGTGAACGGGCAGAAGCAGGGCCATGCCCAAGCCACCCCCAAGATCCCCCTGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613525.4
CDS-3UTR CAA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTGTCCGACCGCCAACCTaGAGCACTGCCAAGTCGCCG +
Preference number: 5 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGVRPPT*STAKSP
Trigger: CGGCGACTTGGCAGTGCTCAAGGTTGGCGGTCGGAC...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGGTGGCCACCAGGTCGTaGGCTTGTTTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQVATRS*ACFLIL
Trigger: CAAGATCAAGAAACAAGCCAACGACCTGGTGGCCAC...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp ATGTTCCCCAGGTGCAAGATCCCCGCCACGAGCTGCAGGACCAGCTaGTGGATGCTGGGCGGGATCCCAATAACCTGCATAGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: MFPRCKIPATSCRTS*WMLGGIPITCIALR
Trigger: TCTGAGTGCTATGCAGGTTATTGGGATCCCGCCCAGCATCCAGCAGCTGGTCCTGCAGCTCGTGGCGGGGATCTTGCACCTGGGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594977.6
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp TCACAGAAACTGATGTTCCCCAGGTGCAAGATCCCCGCCACGAGCTaGAGGACCAGCTGCTGGATGCTGGGCGGGATCCCAATAACCTGC +
Preference number: 5 (lower is better)
Translates to: SQKLMFPRCKIPATS*RTSCWMLGGIPITC
Trigger: GCAGGTTATTGGGATCCCGCCCAGCATCCAGCAGCTGGTCCTGCAGCTCGTGGCGGGGATCTTGCACCTGGGGAACATCAGTTTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594977.6
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp TCGGTCTTGAAGACGCTCTCCAGGAAGCTGTCGGCGGCATCCTCTTaGAGGATGAAGAAGTCGTCCTGTCGCGTGCTGAGGGAGACTCCC +
Preference number: 5 (lower is better)
Translates to: SVLKTLSRKLSAASS*RMKKSSCRVLRETP
Trigger: GGGAGTCTCCCTCAGCACGCGACAGGACGACTTCTTCATCCTCCAAGAGGATGCCGCCGACAGCTTCCTGGAGAGCGTCTTCAAGACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp AGTAGGGGGTGGATTGAGGCGGGGGACAGTGGAATTCTACAGCCCTaGATAAGGGTCCTAGCAGGCTCTTTCCAGCCTGGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SRGWIEAGDSGILQP*IRVLAGSFQPGCWR
Trigger: CCTCCAGCACCCAGGCTGGAAAGAGCCTGCTAGGACCCTTATCCAGGGCTGTAGAATTCCACTGTCCCCCGCCTCAATCCACCCCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601502.1
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACGCCCGGGTAGGGGCTaGGGACGACCTCCGAGGTTT +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKRPGRG*GRPPRF
Trigger: AAACCTCGGAGGTCGTCCCAAGCCCCTACCCGGGCG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCCACTCCCCTCGAGTTaGTGGCGAGATGGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPPLPSS*WRDGSS
Trigger: AGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGG...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CAA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGATCACATACACACACTaGGGCGTCAGGATCAAGTCC +
Preference number: 5 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQITYTH*GVRIKS
Trigger: GGACTTGATCCTGACGCCCAAGTGTGTGTATGTGAT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTGGCTCCCCACCAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATTTGAGGAATTCTGTGTaGTGCTCTGAGGGCGGACGT +
Preference number: 5 (lower is better)
Translates to: LAPHQAGRQIGGRKRRQYLRNSV*CSEGGR
Trigger: ACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAA...ATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTGGTGGGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACCAGGCACTGGCCGTaGCCCCACGCTGCGCTTCCT +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKTRHWP*PHAALP
Trigger: AGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTACCAGGCACTGGCCGTaGCCCCACGCTGCGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCTRHWP*PHAALP
Trigger: AGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGCAGCAGGTGTGATGTaGGAGGAAGACCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPAAGVM*EEDQGP
Trigger: TGGGCCCTGGTCTTCCTCCAACATCACACCTGCTGC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp GGTCCACACTCTCCACTCGGGCGTAATTCCCGTCTTCACAGAAACTaGTGTTCCCCAGGTGCAAGATCCCCGCCACGAGCTGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: GPHSPLGRNSRLHRN*CSPGARSPPRAAGP
Trigger: TGGTCCTGCAGCTCGTGGCGGGGATCTTGCACCTGGGGAACATCAGTTTCTGTGAAGACGGGAATTACGCCCGAGTGGAGAGTGTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp CCATGCCTGGGACCACTCACTGCTCACTGGTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGTCTCGGTTCCTCTCGCAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: PCLGPLTAHWSASAL*GRRRERLGSSRRSR
Trigger: GCGGCTTCTGCGAGAGGAACCGAGACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGACCAGTGAGCAGTGAGTGGTCCCAGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS TCA 90 bp AGAGCATCCGGAGGAAGGCCTGCTCACTGGTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGTCTCGGTTCCTCTCGCAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: RASGGRPAHWSASAL*GRRRERLGSSRRSR
Trigger: GCGGCTTCTGCGAGAGGAACCGAGACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGACCAGTGAGCAGGCCTTCCTCCGGATGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp TGTCTTCCAGGTCCTGCCCTATCCTTGGATCCAGGGATACCACCCTaGCATCCCCACCACCTACAGATGGGAGCTTGCTCCCTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: CLPGPALSLDPGIPP*HPHHLQMGACSLVR
Trigger: CCTTACCAGGGAGCAAGCTCCCATCTGTAGGTGGTGGGGATGCCAGGGTGGTATCCCTGGATCCAAGGATAGGGCAGGACCTGGAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp ATTCTCCCTGGGCCACCTTCTGTCTTCCAGGTCCTGCCCTATCCTTaGATCCAGGGATACCACCCTGGCATCCCCACCACCTACAGATGG +
Preference number: 5 (lower is better)
Translates to: ILPGPPSVFQVLPYP*IQGYHPGIPTTYRW
Trigger: CCATCTGTAGGTGGTGGGGATGCCAGGGTGGTATCCCTGGATCCAAGGATAGGGCAGGACCTGGAAGACAGAAGGTGGCCCAGGGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTCCCTTCCGCGTAGGCTaGGAGCTCTTGGGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAPFRVG*ELLGSP
Trigger: TGGGCTGCCCAAGAGCTCCAAGCCTACGCGGAAGGG...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGCTGGGGCGCCCCTTCTaGTCTCCATCCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLLGRPF*SPSSFS
Trigger: CGAGAAGCTGGATGGAGACAAGAAGGGGCGCCCCAG...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTGCTTGTTTCTTGATCTaGGAGCCGGCGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGACFLI*EPAVLG
Trigger: CCCCAGCACCGCCGGCTCCAAGATCAAGAAACAAGC...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTTGGTCGGGCTCCATGTaGACCGCCCGAAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAWSGSM*TARSRC
Trigger: GCACCTGCTTCGGGCGGTCAACATGGAGCCCGACCA...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCGCCTCCTCGAAGCGCTaGCACAGAAGGCTGACAAAC +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPASSKR*HRRLTN
Trigger: GTTTGTCAGCCTTCTGTGCAAGCGCTTCGAGGAGGC...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCCGGCGCTCCAGCTGTaGAAATGCTCGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCPALQL*KCSWVP
Trigger: GGGGACCCACGAGCATTTCAACAGCTGGAGCGCCGG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACCCGGCGCTCCAGCTGTaGAAATGCTCGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHPALQL*KCSWVP
Trigger: GGGGACCCACGAGCATTTCAACAGCTGGAGCGCCGG...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp CCTTCCCAAAGCTTTAGAGGCAGAAGGAAGTATCACTATGGAGCCTaGGTAGGTTGGCACAGAGAGGTGGGAACGCGGTGGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PSQSFRGRRKYHYGA*VGWHREVGTRWGGL
Trigger: CAGCCCTCCCCACCGCGTTCCCACCTCTCTGTGCCAACCTACCCAGGCTCCATAGTGATACTTCCTTCTGCCTCTAAAGCTTTGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600825.1
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTAGGTTCAGGGGGATCTaGGGGGTGGCTTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCRFRGI*GVAWAW
Trigger: CCATGCCCAAGCCACCCCCAAGATCCCCCTGAACCT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTTCCGATTGATGCTGTaGCGCCTCCGCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPFRLML*RLRSFL
Trigger: CAAGAAGGAGCGGAGGCGCAACAGCATCAATCGGAA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACCTGGGGCGCCCCTTCTaGTCTCCATCCAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHLGRPF*SPSSFS
Trigger: CGAGAAGCTGGATGGAGACAAGAAGGGGCGCCCCAG...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CAGGCCGGCAGGCAGATAGGCGGGCGAAAGAGAAGGCAGTATCCCAGGGCCCAGAGGTCACAGACGACCTaGTTGTTGAAGTACTGGATT +
Preference number: 5 (lower is better)
Translates to: QAGRQIGGRKRRQYPRAQRSQTT*LLKYWI
Trigger: AATCCAGTACTTCAACAACAAGGTCGTCTGTGACCT...CTGGGCCCTGGGATACTGCCTTCTCTTTCGCCCGCCTATCTGCCTGCCGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTACATCAGAACTAGTCCATAGAAACACCATCCTGGCCGCACAGCCACTCCCCCCGGCGCTCCAGCTGTaGAAATGCTCGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: FTSELVHRNTILAAQPLPPALQL*KCSWVP
Trigger: GGGGACCCACGAGCATTTCAACAGCTGGAGCGCCGG...GGGGAGTGGCTGTGCGGCCAGGATGGTGTTTCTATGGACTAGTTCTGATGTAAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS CCA 90 bp CTCAGACTTGACAGGCAGCAACACCTCTGGCTGCCATCCTCCTCTTaGGATAAGGGATGCCCACCAAAGGGTGGCATGGACGTATTCAGC +
Preference number: 5 (lower is better)
Translates to: LRLDRQQHLWLPSSS*DKGCPPKGGMDVFS
Trigger: GCTGAATACGTCCATGCCACCCTTTGGTGGGCATCCCTTATCCCAAGAGGAGGATGGCAGCCAGAGGTGTTGCTGCCTGTCAAGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp ATCTCAATGACCTCGTTCACGTTGAAGCTCAGCTCGTCCACATCTTaGCCCACGTACTGGTATAGGGCCCGGCACCTGGGACCATGTGTC +
Preference number: 5 (lower is better)
Translates to: ISMTSFTLKLSSSTS*PTYWYRARHLGPCV
Trigger: GACACATGGTCCCAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGATGTGGACGAGCTGAGCTTCAACGTGAACGAGGTCATTGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTACGTTGAGGGTCACATaGATGGACTCGCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCTLRVT*MDSLRP
Trigger: CGGGCGCAGCGAGTCCATCAATGTGACCCTCAACGT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTGCCTGCTCCACGTaGAGGGTCACATTGATGGAC +
Preference number: 5 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLAACST*RVTLMD
Trigger: GTCCATCAATGTGACCCTCAACGTGGAGCAGGCAGC...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTGGTTCTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTAAGGTTCAGGGGGATCTaGGGGGTGGCTTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: LVLTVDKHVPVHVVREGVRFRGI*GVAWAW
Trigger: CCATGCCCAAGCCACCCCCAAGATCCCCCTGAACCT...TACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CAA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACCCGCTCTGCTTCACGTaGTGGCTCTGCCAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHPLCFT*WLCQWK
Trigger: CTTCCACTGGCAGAGCCACAACGTGAAGCAGAGCGG...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCCGACGAAGTTCCGATaGATGCTGTTGCGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCPTKFR*MLLRLR
Trigger: GCGGAGGCGCAACAGCATCAATCGGAACTTCGTCGG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAGCGGCGGTCGTACTaGGTGACCGAATCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVKRRSY*VTESAK
Trigger: CTTCGCCGATTCGGTCACCAAGTACGACCGCCGCTT...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCTATTCCACCTGGTGCTaGACTCTGTTCTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPYSTWC*TLFSSQ
Trigger: CTGGGAGGAGAACAGAGTCAAGCACCAGGTGGAATA...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGCCCTTCTCACTTCCTTaGGCGGGAGGGGCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLPFSLP*AGGAEA
Trigger: GGCCTCGGCCCCTCCCGCCAAAGGAAGTGAGAAGGG...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613525.4
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTCCCGCTTGATGGGCTaGAAGCGGCGGTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCSRLMG*KRRSYL
Trigger: CAAGTACGACCGCCGCTTCAAGCCCATCAAGCGGGA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAAGGATCAAGTCCCGCTaGATGGGCTTGAAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKRIKSR*MGLKRR
Trigger: CCGCCGCTTCAAGCCCATCAAGCGGGACTTGATCCT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGCAGCAGGTGTGATGTaGGAGGAAGACCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAAAGVM*EEDQGP
Trigger: TGGGCCCTGGTCTTCCTCCAACATCACACCTGCTGC...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp TATCATCGACAGACCTCAGACTTGACAGGCAGCAACACCTCTGGCTaGCATCCTCCTCTTGGGATAAGGGATGCCCACCAAAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: YHRQTSDLTGSNTSG*HPPLGIRDAHQRVA
Trigger: TGCCACCCTTTGGTGGGCATCCCTTATCCCAAGAGGAGGATGGCAGCCAGAGGTGTTGCTGCCTGTCAAGTCTGAGGTCTGTCGATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp CAAAGGAGGCTATGTCCTTGTCCCTGCAGACTCTGTGATTCTCCCTaGGCCACCTTCTGTCTTCCAGGTCCTGCCCTATCCTTGGATCCA +
Preference number: 5 (lower is better)
Translates to: QRRLCPCPCRLCDSP*ATFCLPGPALSLDP
Trigger: TGGATCCAAGGATAGGGCAGGACCTGGAAGACAGAAGGTGGCCCAGGGAGAATCACAGAGTCTGCAGGGACAAGGACATAGCCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp AGAGGGGAAGTGACTAGCCCAAGGCTACACAGGGAGACGAGAGACTaGGCTGGACTGGGAAAGGGCTCCCTTAATTTGCAAGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: RGEVTSPRLHRETRD*AGLGKGSLNLQAKE
Trigger: CTCCTTTGCTTGCAAATTAAGGGAGCCCTTTCCCAGTCCAGCCCAGTCTCTCGTCTCCCTGTGTAGCCTTGGGCTAGTCACTTCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp TGGGGTGGGGTCAGCCCTGGCCACCTCTTACTTTGCGTCTTATGGTaGTACGATACTGCTAGGAATAGCGCCATGATCACGACAGTCTCC +
Preference number: 5 (lower is better)
Translates to: WGGVSPGHLLLCVLW*YDTARNSAMITTVS
Trigger: GGAGACTGTCGTGATCATGGCGCTATTCCTAGCAGTATCGTACCACCATAAGACGCAAAGTAAGAGGTGGCCAGGGCTGACCCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp CTGTGGGGTGGGGTCAGCCCTGGCCACCTCTTACTTTGCGTCTTATaGTGGTACGATACTGCTAGGAATAGCGCCATGATCACGACAGTC +
Preference number: 5 (lower is better)
Translates to: LWGGVSPGHLLLCVL*WYDTARNSAMITTV
Trigger: GACTGTCGTGATCATGGCGCTATTCCTAGCAGTATCGTACCACCATAAGACGCAAAGTAAGAGGTGGCCAGGGCTGACCCCACCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCGGCGGCATCCTCTaGGAGGATGAAGAAGTCGTC +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAVGGIL*EDEEVV
Trigger: GACGACTTCTTCATCCTCCAAGAGGATGCCGCCGAC...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGCCTCCTCGAAGCGCTaGCACAGAAGGCTGACAAAC +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAASSKR*HRRLTN
Trigger: GTTTGTCAGCCTTCTGTGCAAGCGCTTCGAGGAGGC...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTCACAGTCGATAAGCATGTTCCGGTACATGTTGTCCGTGAGGGCGTAGATGTGTGTAGGTCCCCAGCCTaGGCCCAGGGTACGAAGATG +
Preference number: 5 (lower is better)
Translates to: LTVDKHVPVHVVREGVDVCRSPA*AQGTKM
Trigger: CATCTTCGTACCCTGGGCCAAGGCTGGGGACCTACA...CACATCTACGCCCTCACGGACAACATGTACCGGAACATGCTTATCGACTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598321.5
CDS-3UTR CAA 90 bp GTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCCTCCCTCAGACGACCTTGTTGTaGAAGTACTGGATTGGAGTC +
Preference number: 5 (lower is better)
Translates to: VCGEMAVLGKMEWGPVLPQTTLL*KYWIGV
Trigger: GACTCCAATCCAGTACTTCAACAACAAGGTCGTCTG...AGGGAGGACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CAA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGCCAAAGCGGCTGGAATaGTTGTTGCGCACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLPKRLE*LLRTVL
Trigger: CAAGACTGTGCGCAACAACAATTCCAGCCGCTTTGG...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTCGCCTCCGCTCCTTCTaGTTCAGCAGGATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRARLRSF*FSRMLE
Trigger: TTCCAACATCCTGCTGAACAAGAAGGAGCGGAGGCG...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAATTCTGCATAGCACGGTaGATGGCCTCCACGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKFCIAR*MASTRK
Trigger: CTTCCTCGTGGAGGCCATCAACCGTGCTATGCAGAA...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATGGTCGGGCTCCATGTaGACCGCCCGAAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGWSGSM*TARSRC
Trigger: GCACCTGCTTCGGGCGGTCAACATGGAGCCCGACCA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GGCCGCACAGCCACTCCCCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATCACAGACGACCTTGTaGTTGAAGTACTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: GRTATPLEFVARWQFWVRSQTTL*LKYWIG
Trigger: TCCAATCCAGTACTTCAACAACAAGGTCGTCTGTGA...TCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGGGGAGTGGCTGTGCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CAA 90 bp CCTCGAGTTTGTGGCGAGATGGCAGTTCTGGGTAAGATGGAGTGGGGCCCGGTCAGGTCACAGACGACCTaGTTGTTGAAGTACTGGATT +
Preference number: 5 (lower is better)
Translates to: PRVCGEMAVLGKMEWGPVRSQTT*LLKYWI
Trigger: AATCCAGTACTTCAACAACAAGGTCGTCTGTGACCT...GACCGGGCCCCACTCCATCTTACCCAGAACTGCCATCTCGCCACAAACTCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS-3UTR CAA 90 bp GGACTTTTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGATGACCTCGTTCACGTaGAAGCTCAGCTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: GLLGYCSPGKRGSHWQGLMTSFT*KLSSST
Trigger: TGTGGACGAGCTGAGCTTCAACGTGAACGAGGTCAT...CAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAAAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 90 bp AGGGCTCCCTTAATTTGCAAGCAAAGGAGGCTATGTCCTTGTCCCTaGAGACTCTGTGATTCTCCCTGGGCCACCTTCTGTCTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: RAPLICKQRRLCPCP*RLCDSPWATFCLPG
Trigger: ACCTGGAAGACAGAAGGTGGCCCAGGGAGAATCACAGAGTCTGCAGGGACAAGGACATAGCCTCCTTTGCTTGCAAATTAAGGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACAGCGGCTGTCCATCTaGCGGCTGGTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGQRLSI*RLVSFS
Trigger: GGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCTG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAGTAGGCTTGGAGCTCTaGGGCAGCCCATCGCCCACG +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAVGLEL*GSPSPT
Trigger: CGTGGGCGATGGGCTGCCCAAGAGCTCCAAGCCTAC...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGCGCCCGGGTAGGGGCTaGGGACGACCTCCGAGGTTT +
Preference number: 5 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVRPGRG*GRPPRF
Trigger: AAACCTCGGAGGTCGTCCCAAGCCCCTACCCGGGCG...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAAAGCGCTTCCGGAGGTaGGCGGCAATGGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGKRFRR*AAMASS
Trigger: CGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCTT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACCAAAGCGGCTGGAATaGTTGTTGCGCACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKPKRLE*LLRTVL
Trigger: CAAGACTGTGCGCAACAACAATTCCAGCCGCTTTGG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGGCTATTGCAGCCCAGGTAAACGAGGCTCTCATTGGCAGGGCCTGGCTCCCCTGGTAGGTGTCCGATaGGTTGAGGTAGTAATAGTA +
Preference number: 5 (lower is better)
Translates to: LGYCSPGKRGSHWQGLAPLVGVR*VEVVIV
Trigger: TACTATTACTACCTCAACCAATCGGACACCTACCAG...GGGAGCCAGGCCCTGCCAATGAGAGCCTCGTTTACCTGGGCTGCAATAGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGCCGACGAAGTTCCGATaGATGCTGTTGCGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGPTKFR*MLLRLR
Trigger: GCGGAGGCGCAACAGCATCAATCGGAACTTCGTCGG...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTCACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCHQVVG*FLDLGA
Trigger: GGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTG...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAGTGGCCACCAGGTCGTaGGCTTGTTTCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKVATRS*ACFLIL
Trigger: CAAGATCAAGAAACAAGCCAACGACCTGGTGGCCAC...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTAGCGACTCTGGGTTCTaGACAAAGACCTTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCSDSGF*TKTLVL
Trigger: GAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGCT...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAATTGTTCAGCAGGATGTaGGAAGCTTCCTCCCGCATC +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKLFSRM*EASSRI
Trigger: GATGCGGGAGGAAGCTTCCAACATCCTGCTGAACAA...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGGATCAAGTCCCGCTaGATGGGCTTGAAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGRIKSR*MGLKRR
Trigger: CCGCCGCTTCAAGCCCATCAAGCGGGACTTGATCCT...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGATGACCTCGTTCACGTaGAAGCTCAGCTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVMTSFT*KLSSST
Trigger: TGTGGACGAGCTGAGCTTCAACGTGAACGAGGTCAT...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 90 bp CCATCGCTTGTTAGACATAGCTTCCCATCTCAGCCGAGGACTCTGTaGCAGAACCCACAGACCTTGAGAATGTTGCAACTGAAAGACCCC +
Preference number: 5 (lower is better)
Translates to: PSLVRHSFPSQPRTL*QNPQTLRMLQLKDP
Trigger: GGGGTCTTTCAGTTGCAACATTCTCAAGGTCTGTGGGTTCTGCCACAGAGTCCTCGGCTGAGATGGGAAGCTATGTCTAACAAGCGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 90 bp CGCAGAGCCTGGATGTCCACTTTCTTCTTCAAGACTTCACACACCTaGCCCTTCTCAGGTCCCTTCTTCACTTTCTCTCGCCCAATCACA +
Preference number: 5 (lower is better)
Translates to: RRAWMSTFFFKTSHT*PFSGPFFTFSRPIT
Trigger: TGTGATTGGGCGAGAGAAAGTGAAGAAGGGACCTGAGAAGGGCCAGGTGTGTGAAGTCTTGAAGAAGAAAGTGGACATCCAGGCTCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAACGTTGAGGGTCACATaGATGGACTCGCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGTLRVT*MDSLRP
Trigger: CGGGCGCAGCGAGTCCATCAATGTGACCCTCAACGT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGTGCAGGATGATATCTTaGACGTGCTGGACCTTCTCG +
Preference number: 5 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVCRMIS*TCWTFS
Trigger: CGAGAAGGTCCAGCACGTCAAAGATATCATCCTGCA...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTGCAGGATGATATCTTaGACGTGCTGGACCTTCTCG +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCCRMIS*TCWTFS
Trigger: CGAGAAGGTCCAGCACGTCAAAGATATCATCCTGCA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAAAGCGGCGGTCGTACTaGGTGACCGAATCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGKRRSY*VTESAK
Trigger: CTTCGCCGATTCGGTCACCAAGTACGACCGCCGCTT...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGCAGTCTCGGGGCCTCTaGGTCTCGTTGGGTTTGATG +
Preference number: 5 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLQSRGL*VSLGLM
Trigger: CATCAAACCCAACGAGACCAAGAGGCCCCGAGACTG...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTGGGCAGGACTGGAGGCCAAAGGACTGGACTTTTAGGCTATTGCAGCCCAGGTTCACAGACGACCTTGTaGTTGAAGTACTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: LGRTGGQRTGLLGYCSPGSQTTL*LKYWIG
Trigger: TCCAATCCAGTACTTCAACAACAAGGTCGTCTGTGA...ACCTGGGCTGCAATAGCCTAAAAGTCCAGTCCTTTGGCCTCCAGTCCTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAATCACATACACACACTaGGGCGTCAGGATCAAGTCC +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKITYTH*GVRIKS
Trigger: GGACTTGATCCTGACGCCCAAGTGTGTGTATGTGAT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACTCCGAGGTTTTCCCTaGGCCATTCCCTTCCGCGTA +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGLRGFP*AIPFRV
Trigger: TACGCGGAAGGGAATGGCCAAGGGAAAACCTCGGAG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAACCTCTCATTTTCATTTaGCATGACCACGCGGGACTT +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKPLIFI*HDHAGL
Trigger: AAGTCCCGCGTGGTCATGCAAAATGAAAATGAGAGG...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGCCTCTCATTTTCATTTaGCATGACCACGCGGGACTT +
Preference number: 5 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVPLIFI*HDHAGL
Trigger: AAGTCCCGCGTGGTCATGCAAAATGAAAATGAGAGG...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGTTCTGCATAGCACGGTaGATGGCCTCCACGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGFCIAR*MASTRK
Trigger: CTTCCTCGTGGAGGCCATCAACCGTGCTATGCAGAA...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAGCTTGTTTCTTGATCTaGGAGCCGGCGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAACFLI*EPAVLG
Trigger: CCCCAGCACCGCCGGCTCCAAGATCAAGAAACAAGC...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGTCGTTGGCTTGTTTCTaGATCTTGGAGCCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGSLACF*ILEPAV
Trigger: CACCGCCGGCTCCAAGATCAAGAAACAAGCCAACGA...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTCAGACGACCTTGTTGTaGAAGTACTGGATTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SIVPPVRWGPSQLLPHRAQTTLL*KYWIGV
Trigger: GACTCCAATCCAGTACTTCAACAACAAGGTCGTCTG...AGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCATCCCGCTTGATGGGCTaGAAGCGGCGGTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKASRLMG*KRRSYL
Trigger: CAAGTACGACCGCCGCTTCAAGCCCATCAAGCGGGA...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGCCCTGGTCAGGCACGTaGAGGAATTCTGTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLPWSGT*RNSVLC
Trigger: GCACAACACAGAATTCCTCAACGTGCCTGACCAGGG...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGACTGTGCCTGGCACTTaGCCAACAGCACAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLTVPGT*PTAQDS
Trigger: TGAGTCCTGTGCTGTTGGCAAAGTGCCAGGCACAGT...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp TACTTTGCGTCTTATGGTGGTACGATACTGCTAGGAATAGCGCCATaGTCACGACAGTCTCCCCGTTGCTATCATCGACAGACCTCAGAC +
Preference number: 5 (lower is better)
Translates to: YFASYGGTILLGIAP*SRQSPRCYHRQTSD
Trigger: GTCTGAGGTCTGTCGATGATAGCAACGGGGAGACTGTCGTGATCATGGCGCTATTCCTAGCAGTATCGTACCACCATAAGACGCAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCACTCCGAGGTTTTCCCTaGGCCATTCCCTTCCGCGTA +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALRGFP*AIPFRV
Trigger: TACGCGGAAGGGAATGGCCAAGGGAAAACCTCGGAG...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTAGTCCCCTTTGACACACACAGAAATGGAGAATGGGCAGCAGGTGTGATGTTGTATTCCACCTGGTGCTaGACTCTGTTCTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LVPFDTHRNGEWAAGVMLYSTWC*TLFSSQ
Trigger: CTGGGAGGAGAACAGAGTCAAGCACCAGGTGGAATA...CAACATCACACCTGCTGCCCATTCTCCATTTCTGTGTGTGTCAAAGGGGACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGAGCGACTCTGGGTTCTaGACAAAGACCTTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGSDSGF*TKTLVL
Trigger: GAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGCT...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp ATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGTCACAGACGACCTTGTaGTTGAAGTACTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: IVPPVRWGPSQLLPHRAVSQTTL*LKYWIG
Trigger: TCCAATCCAGTACTTCAACAACAAGGTCGTCTGTGA...CACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAAGGTCACAGACGACCTaGTTGTTGAAGTACTGGATT +
Preference number: 5 (lower is better)
Translates to: VPPVRWGPSQLLPHRAVKRSQTT*LLKYWI
Trigger: AATCCAGTACTTCAACAACAAGGTCGTCTGTGACCT...TTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CATTGTTCCACCTGTAAGATGGGGTCCTTCACAGCTCCTACCTCACAGGGCTGTTTAATCACATGGCAGTaGGGAGGTAGATTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: HCSTCKMGSFTAPTSQGCLITWQ*GGRFCC
Trigger: ACAGCAGAATCTACCTCCCAACTGCCATGTGATTAA...ACAGCCCTGTGAGGTAGGAGCTGTGAAGGACCCCATCTTACAGGTGGAACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACTTAATCACATGGCAGTaGGGAGGTAGATTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHLITWQ*GGRFCC
Trigger: ACAGCAGAATCTACCTCCCAACTGCCATGTGATTAA...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGHQVVG*FLDLGA
Trigger: GGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGTTCTTGACAAAGACCTaGGTGCTCCCCATCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGFLTKT*VLPIWY
Trigger: GTACCAGATGGGGAGCACCAAGGTCTTTGTCAAGAA...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TCCTTCACAGCTCCTACCTCACAGGGCTGTGAAAACATCGTCCTTGTTGGGCACAAGTTCGATAAAGATTaGCTGCAGCTTCTCATTGAC +
Preference number: 5 (lower is better)
Translates to: SFTAPTSQGCENIVLVGHKFDKD*LQLLID
Trigger: GTCAATGAGAAGCTGCAGCAAATCTTTATCGAACTT...GTGCCCAACAAGGACGATGTTTTCACAGCCCTGTGAGGTAGGAGCTGTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGATTCTTGACAAAGACCTaGGTGCTCCCCATCTGGTAC +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGFLTKT*VLPIWY
Trigger: GTACCAGATGGGGAGCACCAAGGTCTTTGTCAAGAA...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCATTGTTCAGCAGGATGTaGGAAGCTTCCTCCCGCATC +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALFSRM*EASSRI
Trigger: GATGCGGGAGGAAGCTTCCAACATCCTGCTGAACAA...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CTTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGCAGACGACCTTGTTGTaGAAGTACTGGATTGGAGTC +
Preference number: 5 (lower is better)
Translates to: LCQQHRTQDPFLNHMAVGQTTLL*KYWIGV
Trigger: GACTCCAATCCAGTACTTCAACAACAAGGTCGTCTG...CCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCATTGAGGAATTCTGTGTaGTGCTCTGAGGGCGGACGT +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALRNSV*CSEGGR
Trigger: ACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAA...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGCCCTGGTCAGGCACGTaGAGGAATTCTGTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVPWSGT*RNSVLC
Trigger: GCACAACACAGAATTCCTCAACGTGCCTGACCAGGG...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGACTGTGCCTGGCACTTaGCCAACAGCACAGGACTCA +
Preference number: 5 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVTVPGT*PTAQDS
Trigger: TGAGTCCTGTGCTGTTGGCAAAGTGCCAGGCACAGT...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCATTATCCAGGCTGGTCTaGAACTCCTGGTCTCACGTG +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKALSRLV*NSWSHV
Trigger: CACGTGAGACCAGGAGTTCAAGACCAGCCTGGATAA...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 90 bp GACAGAGAAGTGAGTGGTAAACTGTGTTTGTTAGATTTCGTTTGCTaGAGGTCTGGCTTAGGCCATGGGACCCACAACAGACAAGGGAAT +
Preference number: 5 (lower is better)
Translates to: DREVSGKLCLLDFVC*RSGLGHGTHNRQGN
Trigger: ATTCCCTTGTCTGTTGTGGGTCCCATGGCCTAAGCCAGACCTTCAGCAAACGAAATCTAACAAACACAGTTTACCACTCACTTCTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596245.1
CDS-3UTR CAA 90 bp GCACTTAGTAAGTTAACTCGTGCTTTCACCTGGCAAAGGTTTATTGCCTTAGTGTTATCCAGGCTGGTCTaGAACTCCTGGTCTCACGTG +
Preference number: 5 (lower is better)
Translates to: ALSKLTRAFTWQRFIALVLSRLV*NSWSHV
Trigger: CACGTGAGACCAGGAGTTCAAGACCAGCCTGGATAA...CACTAAGGCAATAAACCTTTGCCAGGTGAAAGCACGAGTTAACTTACTAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp TTTGCCAACAGCACAGGACTCAAGACCCATTTCTTAATCACATGGCAGTTGGGACTGGTAGGTGTCCGATaGGTTGAGGTAGTAATAGTA +
Preference number: 5 (lower is better)
Translates to: FANSTGLKTHFLITWQLGLVGVR*VEVVIV
Trigger: TACTATTACTACCTCAACCAATCGGACACCTACCAG...TCCCAACTGCCATGTGATTAAGAAATGGGTCTTGAGTCCTGTGCTGTTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS-3UTR CAA 90 bp CCAGCCCAAACTGGGACAAATTCAAGCTTTATGGTCACATATGAATGCAAGGCAAAGTTCGATAAAGATTaGCTGCAGCTTCTCATTGAC +
Preference number: 5 (lower is better)
Translates to: PAQTGTNSSFMVTYECKAKFDKD*LQLLID
Trigger: GTCAATGAGAAGCTGCAGCAAATCTTTATCGAACTT...TGCCTTGCATTCATATGTGACCATAAAGCTTGAATTTGTCCCAGTTTGGGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp CCGAGGCTGGGGCTTGGGTCGGCCCACACCAGGCACTaGCCGTTGCCCCACGCTGCGCTTCCTCTGCATGCC +
Preference number: 6 (lower is better)
Translates to: PRLGLGSAHTRH*PLPHAALPLHA
Trigger: GGCATGCAGAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp CCCGGCACCTGGGACCATGTGTCCGAGGCTGGGGCTTaGGTCGGCCCACACCAGGCACTGGCCGTTGCCCCA +
Preference number: 6 (lower is better)
Translates to: PGTWDHVSEAGA*VGPHQALAVAP
Trigger: TGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGACACATGGTCCCAGGTGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp TGTCCGAGGCTGGGGCTTGGGTCGGCCCACACCAGGCACTGGCCGTaGCCCCACGCTGCGCTTCCTCTGCATGCCGGCCATGCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: CPRLGLGSAHTRHWP*PHAALPLHAGHALV
Trigger: GACCAGGGCATGGCCGGCATGCAGAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCAGCCTCGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp TGGGGCTTGGGTCGGCCCACACCAGGCACTGGCCGTTaGCCCACGCTGCGCTTCCTCTGCATGCCGGCCATG +
Preference number: 6 (lower is better)
Translates to: WGLGRPTPGTGR*PTLRFLCMPAM
Trigger: CATGGCCGGCATGCAGAGGAAGCGCAGCGTGGGGCAACGGCCAGTGCCTGGTGTGGGCCGACCCAAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp GGCAGCCCATCGCCCACGCTGACCGTGAGGGTCCGACCGCCAACCTaGAGCACTGCCAAGTCGCCGAAGCCGCGGGAGAAGGTGACGCTG +
Preference number: 6 (lower is better)
Translates to: GSPSPTLTVRVRPPT*STAKSPKPREKVTL
Trigger: CAGCGTCACCTTCTCCCGCGGCTTCGGCGACTTGGCAGTGCTCAAGGTTGGCGGTCGGACCCTCACGGTCAGCGTGGGCGATGGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000596245.1
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp TGGACTCGCTGCGCCCGCCCCAGCGGCTGTCCATCTTaGGGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTGT +
Preference number: 6 (lower is better)
Translates to: WTRCARPSGCPS*GWSASPAVARC
Trigger: ACAGCGGGCGACTGCAGGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCTGGGGCGGGCGCAGCGAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000596937.1
ENST00000600825.1
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp CGCTGCGCCCGCCCCAGCGGCTGTCCATCTTGCGGCTaGTCAGCTTCTCCTGCAGTCGCCCGCTGTCAATGC +
Preference number: 6 (lower is better)
Translates to: RCARPSGCPSCG*SASPAVARCQC
Trigger: GCATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCTGGGGCGGGCGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000596937.1
ENST00000600825.1
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp ATGGACTCGCTGCGCCCGCCCCAGCGGCTGTCCATCTaGCGGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: MDSLRPPQRLSI*RLVSFSCSRPL
Trigger: CAGCGGGCGACTGCAGGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCTGGGGCGGGCGCAGCGAGTCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000596937.1
ENST00000600825.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp AAATGCTCGTGGGTCCCCACAGCCGCCTGCAGCTTCTaGAGCAGTGTCTGGTCTGCTCCCCCGCCCGTGGCG +
Preference number: 6 (lower is better)
Translates to: KCSWVPTAACSF*SSVWSAPPPVA
Trigger: CGCCACGGGCGGGGGAGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGCTGTGGGGACCCACGAGCATTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000601502.1
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp TCGCCCACGCTGACCGTGAGGGTCCGACCGCCAACCTaGAGCACTGCCAAGTCGCCGAAGCCGCGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SPTLTVRVRPPT*STAKSPKPREK
Trigger: CTTCTCCCGCGGCTTCGGCGACTTGGCAGTGCTCAAGGTTGGCGGTCGGACCCTCACGGTCAGCGTGGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000596245.1
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp GGGCCGCGCCCTGATAGAGGTCGATCTCACGGTCGGTaGAGTAGGGCATCTGCTGCCCACCCCCAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GPRPDRGRSHGR*SRASAAHPQPW
Trigger: CCAAGGCTGGGGGTGGGCAGCAGATGCCCTACTTCACCGACCGTGAGATCGACCTCTATCAGGGCGCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596675.1
CDS GCA 72 bp GCTGACCGTGAGGGTCCGACCGCCAACCTTGAGCACTaGCAAGTCGCCGAAGCCGCGGGAGAAGGTGACGCT +
Preference number: 6 (lower is better)
Translates to: ADREGPTANLEH*QVAEAAGEGDA
Trigger: AGCGTCACCTTCTCCCGCGGCTTCGGCGACTTGGCAGTGCTCAAGGTTGGCGGTCGGACCCTCACGGTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000596245.1
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp GGTGGCATGGACGTATTCAGCCTCTCCTGCCTCTGCTaGAGCCATACCGCCCGTCACCGGCACAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GGMDVFSLSCLC*SHTARHRHREG
Trigger: GCCCTCCCTGTGCCGGTGACGGGCGGTATGGCTGCAGCAGAGGCAGGAGAGGCTGAATACGTCCATGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp CATCTTGGCCCACGTACTGGTATAGGGCCCGGCACCTaGGACCATGTGTCCGAGGCTGGGGCTTGGGTCGGC +
Preference number: 6 (lower is better)
Translates to: HLGPRTGIGPGT*DHVSEAGAWVG
Trigger: GCCGACCCAAGCCCCAGCCTCGGACACATGGTCCCAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp GTCACATTGATGGACTCGCTGCGCCCGCCCCAGCGGCTGTCCATCTaGCGGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTGTCAATGCCC +
Preference number: 6 (lower is better)
Translates to: VTLMDSLRPPQRLSI*RLVSFSCSRPLSMP
Trigger: GGGCATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAGCCGCAAGATGGACAGCCGCTGGGGCGGGCGCAGCGAGTCCATCAATGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000596937.1
ENST00000600825.1
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp TGGTGCTCCCCATCTGGTACTGGTCGGGCTCCATGTTaGCCGCCCGAAGCAGGTGCTGGACGCCCTGGCGTT +
Preference number: 6 (lower is better)
Translates to: WCSPSGTGRAPC*PPEAGAGRPGV
Trigger: AACGCCAGGGCGTCCAGCACCTGCTTCGGGCGGTCAACATGGAGCCCGACCAGTACCAGATGGGGAGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp GGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTGTCAATaGCCAGCAGGTAGGCGGGAAAGGCCAGGAGGTCCA +
Preference number: 6 (lower is better)
Translates to: GWSASPAVARCQ*PAGRRERPGGP
Trigger: TGGACCTCCTGGCCTTTCCCGCCTACCTGCTGGGCATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594977.6
ENST00000595191.1
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp CGTGATGGAGGTGCAGGTTCAGGGGGATCTTGGGGGTaGCTTGGGCATGGCCCTGCTTCTGCCCGTTCACCG +
Preference number: 6 (lower is better)
Translates to: RDGGAGSGGSWG*LGHGPASARSP
Trigger: CGGTGAACGGGCAGAAGCAGGGCCATGCCCAAGCCACCCCCAAGATCCCCCTGAACCTGCACCTCCATCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000594774.5
ENST00000595046.1
ENST00000595325.5
ENST00000596645.1
ENST00000596675.1
ENST00000598321.5
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp TCCTCCCGCATCTCCTCGTACTTCCGGACAGCCACGTaGCGCCGCCAGGCCTTCTGGATGGTTCGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: SSRISSYFRTAT*RRQAFWMVRAK
Trigger: CTTTGCCCGAACCATCCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGAAGTACGAGGAGATGCGGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597222.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp TTGGTGCTCCCCATCTGGTACTGGTCGGGCTCCATGTaGACCGCCCGAAGCAGGTGCTGGACGCCCTGGCGT +
Preference number: 6 (lower is better)
Translates to: LVLPIWYWSGSM*TARSRCWTPWR
Trigger: ACGCCAGGGCGTCCAGCACCTGCTTCGGGCGGTCAACATGGAGCCCGACCAGTACCAGATGGGGAGCACCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp TGGGTCGTGATGGAGGTGCAGGTTCAGGGGGATCTTGGGGGTGGCTaGGGCATGGCCCTGCTTCTGCCCGTTCACCGGACTCCCGGCTTT +
Preference number: 6 (lower is better)
Translates to: WVVMEVQVQGDLGGG*GMALLLPVHRTPGF
Trigger: AAAGCCGGGAGTCCGGTGAACGGGCAGAAGCAGGGCCATGCCCAAGCCACCCCCAAGATCCCCCTGAACCTGCACCTCCATCACGACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000594774.5
ENST00000595046.1
ENST00000595325.5
ENST00000596675.1
ENST00000598321.5
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp ACGCTGCGCTTCCTCTGCATGCCGGCCATGCCCTGGTCAGGCACGTaGAGGAATTCTGTGTTGTGCTCTGAGGGCGGACGTGCCCGGGGT +
Preference number: 6 (lower is better)
Translates to: TLRFLCMPAMPWSGT*RNSVLCSEGGRARG
Trigger: ACCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAACGTGCCTGACCAGGGCATGGCCGGCATGCAGAGGAAGCGCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp CTGGTCAGGCACGTTGAGGAATTCTGTGTTGTGCTCTaGGGGCGGACGTGCCCGGGGTCGTCTGCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: LVRHVEEFCVVL*GRTCPGSSAGS
Trigger: GGAGCCAGCAGACGACCCCGGGCACGTCCGCCCTCAGAGCACAACACAGAATTCCTCAACGTGCCTGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp AAGGGTGGCATGGACGTATTCAGCCTCTCCTGCCTCTaGTGCAGCCATACCGCCCGTCACCGGCACAGGGAG +
Preference number: 6 (lower is better)
Translates to: KGGMDVFSLSCL*CSHTARHRHRE
Trigger: CTCCCTGTGCCGGTGACGGGCGGTATGGCTGCAGCAGAGGCAGGAGAGGCTGAATACGTCCATGCCACCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS GCA 72 bp CAGCTGTTGAAATGCTCGTGGGTCCCCACAGCCGCCTaGAGCTTCTGCAGCAGTGTCTGGTCTGCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: QLLKCSWVPTAA*SFCSSVWSAPP
Trigger: CGGGGGAGCAGACCAGACACTGCTGCAGAAGCTGCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000601502.1
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp TGGTGGATGACGAAGCCGGCGCTCCAGCTGTTGAAATaGTCGTGGGTCCCCACAGCCGCCTGCAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: WWMTKPALQLLK*SWVPTAACSFC
Trigger: GCAGAAGCTGCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAGCTGGAGCGCCGGCTTCGTCATCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000601502.1
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp GGCTGGTCAGCTTCTCCTGCAGTCGCCCGCTGTCAATaGCCAGCAGGTAGGCGGGAAAGGCCAGGACTACCA +
Preference number: 6 (lower is better)
Translates to: GWSASPAVARCQ*PAGRRERPGLP
Trigger: TGGTAGTCCTGGCCTTTCCCGCCTACCTGCTGGGCATTGACAGCGGGCGACTGCAGGAGAAGCTGACCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596937.1
CDS CCA 72 bp TCCGGACAGCCACGTGGCGCCGCCAGGCCTTCTGGATaGTTCGGGCAAAGCCATCGAACTTTCGCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: SGQPRGAARPSG*FGQSHRTFALA
Trigger: TGCGAGAGCGAAAGTTCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp AGGGGCAGGGGCCTCCGCGTCGCCTCCTCGAAGCGCTaGCACAGAAGGCTGACAAACTCGGTCTTGAAGACG +
Preference number: 6 (lower is better)
Translates to: RGRGLRVASSKR*HRRLTNSVLKT
Trigger: CGTCTTCAAGACCGAGTTTGTCAGCCTTCTGTGCAAGCGCTTCGAGGAGGCGACGCGGAGGCCCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp ACAAAGACCTTGGTGCTCCCCATCTGGTACTGGTCGGGCTCCATGTaGACCGCCCGAAGCAGGTGCTGGACGCCCTGGCGTTCGTCCCCA +
Preference number: 6 (lower is better)
Translates to: TKTLVLPIWYWSGSM*TARSRCWTPWRSSP
Trigger: TGGGGACGAACGCCAGGGCGTCCAGCACCTGCTTCGGGCGGTCAACATGGAGCCCGACCAGTACCAGATGGGGAGCACCAAGGTCTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp CTGAAGGTGAGGGGCAGGGGCCTCCGCGTCGCCTCCTCGAAGCGCTaGCACAGAAGGCTGACAAACTCGGTCTTGAAGACGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LKVRGRGLRVASSKR*HRRLTNSVLKTLSR
Trigger: CCTGGAGAGCGTCTTCAAGACCGAGTTTGTCAGCCTTCTGTGCAAGCGCTTCGAGGAGGCGACGCGGAGGCCCCTGCCCCTCACCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp CCCTTCCAGCAGCTGGAGGGTGTGCCATGTTCATGCATCTGGTGCTaGCCTGGCTCAGCCCCTGTGATCCCTCATCTGCCCTGCCATGCC +
Preference number: 6 (lower is better)
Translates to: PFQQLEGVPCSCIWC*PGSAPVIPHLPCHA
Trigger: GGCATGGCAGGGCAGATGAGGGATCACAGGGGCTGAGCCAGGCAAGCACCAGATGCATGAACATGGCACACCCTCCAGCTGCTGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595325.5
CDS TCA 72 bp AGCGCTTCCGGAGGTTGGCGGCAATGGCGTCTTCGGTaGTCTGGGGAAGAAGCACCATGTCATCCACGCCGC +
Preference number: 6 (lower is better)
Translates to: SASGGWRQWRLR*SGEEAPCHPRR
Trigger: GCGGCGTGGATGACATGGTGCTTCTTCCCCAGATCACCGAAGACGCCATTGCCGCCAACCTCCGGAAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000594774.5
ENST00000595325.5
ENST00000596645.1
ENST00000596675.1
ENST00000598321.5
ENST00000599123.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp ATGTCATCCACGCCGCTCTGCTTCACGTTGTGGCTCTaGCAGTGGAAGCGCTCCTTGCTGCCCATGGTGGGG +
Preference number: 6 (lower is better)
Translates to: MSSTPLCFTLWL*QWKRSLLPMVG
Trigger: CCCCACCATGGGCAGCAAGGAGCGCTTCCACTGGCAGAGCCACAACGTGAAGCAGAGCGGCGTGGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000594774.5
ENST00000595325.5
ENST00000596645.1
ENST00000596675.1
ENST00000598321.5
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp GAGGTCTGCCTGGCCGGGGACTGGAGTAGAGGCCGGTaGTCACCAGAGTCTCACCAAAGTCGCTTCTGTCGT +
Preference number: 6 (lower is better)
Translates to: EVCLAGDWSRGR*SPESHQSRFCR
Trigger: ACGACAGAAGCGACTTTGGTGAGACTCTGGTGAGCACCGGCCTCTACTCCAGTCCCCGGCCAGGCAGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595325.5
ENST00000598529.5
CDS CCA 72 bp GGGCCACCTTCTGTCTTCCAGGTCCTGCCCTATCCTTaGATCCAGGGATACCACCCTGGCATCCCCACCACC +
Preference number: 6 (lower is better)
Translates to: GPPSVFQVLPYP*IQGYHPGIPTT
Trigger: GGTGGTGGGGATGCCAGGGTGGTATCCCTGGATCCAAGGATAGGGCAGGACCTGGAAGACAGAAGGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp ATGACGAAGCCGGCGCTCCAGCTGTTGAAATGCTCGTaGGTCCCCACAGCCGCCTGCAGCTTCTGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: MTKPALQLLKCS*VPTAACSFCSS
Trigger: ACTGCTGCAGAAGCTGCAGGCGGCTGTGGGGACCCACGAGCATTTCAACAGCTGGAGCGCCGGCTTCGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000601502.1
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp AAGTCCCGCTTGATGGGCTTGAAGCGGCGGTCGTACTaGGTGACCGAATCGGCGAAGTCCACCCGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: KSRLMGLKRRSY*VTESAKSTRSL
Trigger: GAGGGAGCGGGTGGACTTCGCCGATTCGGTCACCAAGTACGACCGCCGCTTCAAGCCCATCAAGCGGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp ACCGCCCGTCACCGGCACAGGGAGGGCGTCAATCCACCCCATCGCTaGTTAGACATAGCTTCCCATCTCAGCCGAGGACTCTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: TARHRHREGVNPPHR*LDIASHLSRGLCGR
Trigger: TCTGCCACAGAGTCCTCGGCTGAGATGGGAAGCTATGTCTAACAAGCGATGGGGTGGATTGACGCCCTCCCTGTGCCGGTGACGGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS GCA 72 bp TTGCTCCCTGGTAAGGGATGCTGGAGGCACCTGAGCTaGACTGAGAGACACCCCACCCCCACAGAAGTCCAC +
Preference number: 6 (lower is better)
Translates to: LLPGKGCWRHLS*TERHPTPTEVH
Trigger: GTGGACTTCTGTGGGGGTGGGGTGTCTCTCAGTGCAGCTCAGGTGCCTCCAGCATCCCTTACCAGGGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS GCA 72 bp CCACCTACAGATGGGAGCTTGCTCCCTGGTAAGGGATaGTGGAGGCACCTGAGCTGCACTGAGAGACACCCC +
Preference number: 6 (lower is better)
Translates to: PPTDGSLLPGKG*WRHLSCTERHP
Trigger: GGGGTGTCTCTCAGTGCAGCTCAGGTGCCTCCAGCATCCCTTACCAGGGAGCAAGCTCCCATCTGTAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp GGTCCTGCCCTATCCTTGGATCCAGGGATACCACCCTaGCATCCCCACCACCTACAGATGGGAGCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: GPALSLDPGIPP*HPHHLQMGACS
Trigger: GGAGCAAGCTCCCATCTGTAGGTGGTGGGGATGCCAGGGTGGTATCCCTGGATCCAAGGATAGGGCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp TACTTCCGGACAGCCACGTGGCGCCGCCAGGCCTTCTaGATGGTTCGGGCAAAGCCATCGAACTTTCGCTCT +
Preference number: 6 (lower is better)
Translates to: YFRTATWRRQAF*MVRAKPSNFRS
Trigger: AGAGCGAAAGTTCGATGGCTTTGCCCGAACCATCCAGAAGGCCTGGCGGCGCCACGTGGCTGTCCGGAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597222.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp TGGGCCACCTTCTGTCTTCCAGGTCCTGCCCTATCCTaGGATCCAGGGATACCACCCTGGCATCCCCACCAC +
Preference number: 6 (lower is better)
Translates to: WATFCLPGPALS*DPGIPPWHPHH
Trigger: GTGGTGGGGATGCCAGGGTGGTATCCCTGGATCCAAGGATAGGGCAGGACCTGGAAGACAGAAGGTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp AGTGTGGCCACCAGGTCGTTGGCTTGTTTCTTGATCTaGGAGCCGGCGGTGCTGGGGCGCCCCTTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: SVATRSLACFLI*EPAVLGRPFLS
Trigger: AGACAAGAAGGGGCGCCCCAGCACCGCCGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGGCCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp TGTGCACCTCATCAGTGTGGCCACCAGGTCGTTGGCTaGTTTCTTGATCTTGGAGCCGGCGGTGCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: CAPHQCGHQVVG*FLDLGAGGAGA
Trigger: CGCCCCAGCACCGCCGGCTCCAAGATCAAGAAACAAGCCAACGACCTGGTGGCCACACTGATGAGGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp CAGCTGGAGGGTGTGCCATGTTCATGCATCTGGTGCTaGCCTGGCTCAGCCCCTGTGATCCCTCATCTGCCC +
Preference number: 6 (lower is better)
Translates to: QLEGVPCSCIWC*PGSAPVIPHLP
Trigger: GGGCAGATGAGGGATCACAGGGGCTGAGCCAGGCAAGCACCAGATGCATGAACATGGCACACCCTCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595325.5
CDS CAA 90 bp CTCGGTCTTGAAGACGCTCTCCAGGAAGCTGTCGGCGGCATCCTCTaGGAGGATGAAGAAGTCGTCCTGTCGCGTGCTGAGGGAGACTCC +
Preference number: 6 (lower is better)
Translates to: LGLEDALQEAVGGIL*EDEEVVLSRAEGDS
Trigger: GGAGTCTCCCTCAGCACGCGACAGGACGACTTCTTCATCCTCCAAGAGGATGCCGCCGACAGCTTCCTGGAGAGCGTCTTCAAGACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp GTCGCCTCCTCGAAGCGCTTGCACAGAAGGCTGACAAACTCGGTCTaGAAGACGCTCTCCAGGAAGCTGTCGGCGGCATCCTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: VASSKRLHRRLTNSV*KTLSRKLSAASSWR
Trigger: CCTCCAAGAGGATGCCGCCGACAGCTTCCTGGAGAGCGTCTTCAAGACCGAGTTTGTCAGCCTTCTGTGCAAGCGCTTCGAGGAGGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp GACAGGCAGCAACACCTCTGGCTGCCATCCTCCTCTTaGGATAAGGGATGCCCACCAAAGGGTGGCATGGAC +
Preference number: 6 (lower is better)
Translates to: DRQQHLWLPSSS*DKGCPPKGGMD
Trigger: GTCCATGCCACCCTTTGGTGGGCATCCCTTATCCCAAGAGGAGGATGGCAGCCAGAGGTGTTGCTGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp AAGACGCTCTCCAGGAAGCTGTCGGCGGCATCCTCTTaGAGGATGAAGAAGTCGTCCTGTCGCGTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: KTLSRKLSAASS*RMKKSSCRVLR
Trigger: CCTCAGCACGCGACAGGACGACTTCTTCATCCTCCAAGAGGATGCCGCCGACAGCTTCCTGGAGAGCGTCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp TTGAAGCTCAGCTCGTCCACATCTTGGCCCACGTACTaGTATAGGGCCCGGCACCTGGGACCATGTGTCCGA +
Preference number: 6 (lower is better)
Translates to: LKLSSSTSWPTY*YRARHLGPCVR
Trigger: TCGGACACATGGTCCCAGGTGCCGGGCCCTATACCAGTACGTGGGCCAAGATGTGGACGAGCTGAGCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp CACCGGCACAGGGAGGGCGTCAATCCACCCCATCGCTaGTTAGACATAGCTTCCCATCTCAGCCGAGGACTC +
Preference number: 6 (lower is better)
Translates to: HRHREGVNPPHR*LDIASHLSRGL
Trigger: GAGTCCTCGGCTGAGATGGGAAGCTATGTCTAACAAGCGATGGGGTGGATTGACGCCCTCCCTGTGCCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp GAAGACGCTCTCCAGGAAGCTGTCGGCGGCATCCTCTaGGAGGATGAAGAAGTCGTCCTGTCGCGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: EDALQEAVGGIL*EDEEVVLSRAE
Trigger: CTCAGCACGCGACAGGACGACTTCTTCATCCTCCAAGAGGATGCCGCCGACAGCTTCCTGGAGAGCGTCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp GATTCTCCCTGGGCCACCTTCTGTCTTCCAGGTCCTGCCCTATCCTaGGATCCAGGGATACCACCCTGGCATCCCCACCACCTACAGATG +
Preference number: 6 (lower is better)
Translates to: DSPWATFCLPGPALS*DPGIPPWHPHHLQM
Trigger: CATCTGTAGGTGGTGGGGATGCCAGGGTGGTATCCCTGGATCCAAGGATAGGGCAGGACCTGGAAGACAGAAGGTGGCCCAGGGAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS TCA 72 bp AGAAGAGAACGTCTCGGTTCCTCTCGCAGAAGCCGCTaGCGTCGTAGGAGACCTTGCCAGCGTAGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: RRERLGSSRRSR*RRRRPCQRSGG
Trigger: TCCACCACTACGCTGGCAAGGTCTCCTACGACGTCAGCGGCTTCTGCGAGAGGAACCGAGACGTTCTCTTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602136.2
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp GGAGGAAGGCCTGCTCACTGGTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGTCTCGGTTCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GGRPAHWSASAL*GRRRERLGSSR
Trigger: GCGAGAGGAACCGAGACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGACCAGTGAGCAGGCCTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp CAGGATCCCCCATCCCTGACTGCTTGGCCGCCCACCTaGTCGGCCTTCAGGGTAAGTTCGATAAAGATTTGC +
Preference number: 6 (lower is better)
Translates to: QDPPSLTAWPPT*SAFRVSSIKIC
Trigger: GCAAATCTTTATCGAACTTACCCTGAAGGCCGAGCAGGTGGGCGGCCAAGCAGTCAGGGATGGGGGATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600825.1
CDS CCA 72 bp TGGATTGAGGCGGGGGACAGTGGAATTCTACAGCCCTaGATAAGGGTCCTAGCAGGCTCTTTCCAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: WIEAGDSGILQP*IRVLAGSFQPG
Trigger: CCCAGGCTGGAAAGAGCCTGCTAGGACCCTTATCCAGGGCTGTAGAATTCCACTGTCCCCCGCCTCAATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601502.1
CDS CCA 72 bp TTCCAGCAGCTGGAGGGTGTGCCATGTTCATGCATCTaGTGCTTGCCTGGCTCAGCCCCTGTGATCCCTCAT +
Preference number: 6 (lower is better)
Translates to: FQQLEGVPCSCI*CLPGSAPVIPH
Trigger: ATGAGGGATCACAGGGGCTGAGCCAGGCAAGCACCAGATGCATGAACATGGCACACCCTCCAGCTGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595325.5
CDS CAA 72 bp TCGAAGCGCTTGCACAGAAGGCTGACAAACTCGGTCTaGAAGACGCTCTCCAGGAAGCTGTCGGCGGCATCC +
Preference number: 6 (lower is better)
Translates to: SKRLHRRLTNSV*KTLSRKLSAAS
Trigger: GGATGCCGCCGACAGCTTCCTGGAGAGCGTCTTCAAGACCGAGTTTGTCAGCCTTCTGTGCAAGCGCTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000600885.1
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp TCCCCGACGAAGTTCCGATTGATGCTGTTGCGCCTCCGCTCCTTCTaGTTCAGCAGGATGTTGGAAGCTTCCTCCCGCATCTCCTCGTAC +
Preference number: 6 (lower is better)
Translates to: SPTKFRLMLLRLRSF*FSRMLEASSRISSY
Trigger: GTACGAGGAGATGCGGGAGGAAGCTTCCAACATCCTGCTGAACAAGAAGGAGCGGAGGCGCAACAGCATCAATCGGAACTTCGTCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598797.1
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp AGTCTCCCCGTTGCTATCATCGACAGACCTCAGACTTaGCAGGCAGCAACACCTCTGGCTGCCATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLPVAIIDRPQT*QAATPLAAILL
Trigger: GAGGAGGATGGCAGCCAGAGGTGTTGCTGCCTGTCAAGTCTGAGGTCTGTCGATGATAGCAACGGGGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS TCA 72 bp GGACCACTCACTGCTCACTGGTCTGCATCAGCTCTATaGGGTCGGAGAAGAGAACGTCTCGGTTCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GPLTAHWSASAL*GRRRERLGSSR
Trigger: GCGAGAGGAACCGAGACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGACCAGTGAGCAGTGAGTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS GCA 72 bp CAGACCTCAGACTTGACAGGCAGCAACACCTCTGGCTaGCATCCTCCTCTTGGGATAAGGGATGCCCACCAA +
Preference number: 6 (lower is better)
Translates to: QTSDLTGSNTSG*HPPLGIRDAHQ
Trigger: TTGGTGGGCATCCCTTATCCCAAGAGGAGGATGGCAGCCAGAGGTGTTGCTGCCTGTCAAGTCTGAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS GCA 72 bp TCCAGCACACCGATGCTGTACTCTTCCTGGGGTTTCTaGATAGCACGGTTGATGGCCTCCACGAGGAAGTCG +
Preference number: 6 (lower is better)
Translates to: SSTPMLYSSWGF*IARLMASTRKS
Trigger: CGACTTCCTCGTGGAGGCCATCAACCGTGCTATGCAGAAACCCCAGGAAGAGTACAGCATCGGTGTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594977.6
ENST00000600825.1
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp GTCCCCATGCCTGGGACCACTCACTGCTCACTGGTCTaGATCAGCTCTATGAGGTCGGAGAAGAGAACGTCT +
Preference number: 6 (lower is better)
Translates to: VPMPGTTHCSLV*ISSMRSEKRTS
Trigger: AGACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGACCAGTGAGCAGTGAGTGGTCCCAGGCATGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602136.2
CDS GCA 72 bp GGGAAGAGCATCCGGAGGAAGGCCTGCTCACTGGTCTaGATCAGCTCTATGAGGTCGGAGAAGAGAACGTCT +
Preference number: 6 (lower is better)
Translates to: GKSIRRKACSLV*ISSMRSEKRTS
Trigger: AGACGTTCTCTTCTCCGACCTCATAGAGCTGATGCAGACCAGTGAGCAGGCCTTCCTCCGGATGCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp CTATGTCCTTGTCCCTGCAGACTCTGTGATTCTCCCTaGGCCACCTTCTGTCTTCCAGGTCCTGCCCTATCC +
Preference number: 6 (lower is better)
Translates to: LCPCPCRLCDSP*ATFCLPGPALS
Trigger: GGATAGGGCAGGACCTGGAAGACAGAAGGTGGCCCAGGGAGAATCACAGAGTCTGCAGGGACAAGGACATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp CAGTCTCCCCGTTGCTATCATCGACAGACCTCAGACTaGACAGGCAGCAACACCTCTGGCTGCCATCCTCCT +
Preference number: 6 (lower is better)
Translates to: QSPRCYHRQTSD*TGSNTSGCHPP
Trigger: AGGAGGATGGCAGCCAGAGGTGTTGCTGCCTGTCAAGTCTGAGGTCTGTCGATGATAGCAACGGGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp CGCACCTCCTCCAGGAGGAAAAGCGACTCTGGGTTCTaGACAAAGACCTTGGTGCTCCCCATCTGGTACTGG +
Preference number: 6 (lower is better)
Translates to: RTSSRRKSDSGF*TKTLVLPIWYW
Trigger: CCAGTACCAGATGGGGAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGCTTTTCCTCCTGGAGGAGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 72 bp GACGCCCCCGCCAAAGTTGACCCAGCCCTCACCAGCTaGTTTTCGATGAGGTCACAGACGACCTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: DAPAKVDPALTS*FSMRSQTTLLL
Trigger: CAACAACAAGGTCGTCTGTGACCTCATCGAAAACAAGCTGGTGAGGGCTGGGTCAACTTTGGCGGGGGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594977.6
CDS TCA 72 bp GCACCTCCTCCAGGAGGAAAAGCGACTCTGGGTTCTTaGCAAAGACCTTGGTGCTCCCCATCTGGTACTGGT +
Preference number: 6 (lower is better)
Translates to: APPPGGKATLGS*QRPWCSPSGTG
Trigger: ACCAGTACCAGATGGGGAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGCTTTTCCTCCTGGAGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS GCA 72 bp CTGTGGGGTGGGGTCAGCCCTGGCCACCTCTTACTTTaGGTCTTATGGTGGTACGATACTGCTAGGAATAGC +
Preference number: 6 (lower is better)
Translates to: LWGGVSPGHLLL*VLWWYDTARNS
Trigger: GCTATTCCTAGCAGTATCGTACCACCATAAGACGCAAAGTAAGAGGTGGCCAGGGCTGACCCCACCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp CAAGGCTACACAGGGAGACGAGAGACTGGGCTGGACTaGGAAAGGGCTCCCTTAATTTGCAAGCAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: QGYTGRRETGLD*ERAPLICKQRR
Trigger: CCTCCTTTGCTTGCAAATTAAGGGAGCCCTTTCCCAGTCCAGCCCAGTCTCTCGTCTCCCTGTGTAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp AGGAGGAAAAGCGACTCTGGGTTCTTGACAAAGACCTaGGTGCTCCCCATCTGGTACTGGTCGGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: RRKSDSGFLTKT*VLPIWYWSGSM
Trigger: CATGGAGCCCGACCAGTACCAGATGGGGAGCACCAAGGTCTTTGTCAAGAACCCAGAGTCGCTTTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598005.2
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp CAGCCCGAGGGATCTTCCATGAGGATCTCAATGACCTCGTTCACGTaGAAGCTCAGCTCGTCCACATCTTGGCCCACGTACTGGTATAGG +
Preference number: 6 (lower is better)
Translates to: QPEGSSMRISMTSFT*KLSSSTSWPTYWYR
Trigger: CCTATACCAGTACGTGGGCCAAGATGTGGACGAGCTGAGCTTCAACGTGAACGAGGTCATTGAGATCCTCATGGAAGATCCCTCGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp CTCCTGGGTTCAAATGATCCCCCAACCTCAGCCCTCTaGGTAGCCAGAACTACACATGCACACCACTACACC +
Preference number: 6 (lower is better)
Translates to: LLGSNDPPTSAL*VARTTHAHHYT
Trigger: GGTGTAGTGGTGTGCATGTGTAGTTCTGGCTACTCAGAGGGCTGAGGTTGGGGGATCATTTGAACCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595191.1
CDS CCA 72 bp GGGGTCAGCCCTGGCCACCTCTTACTTTGCGTCTTATaGTGGTACGATACTGCTAGGAATAGCGCCATGATC +
Preference number: 6 (lower is better)
Translates to: GVSPGHLLLCVL*WYDTARNSAMI
Trigger: GATCATGGCGCTATTCCTAGCAGTATCGTACCACCATAAGACGCAAAGTAAGAGGTGGCCAGGGCTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp AGAGACTGGGCTGGACTGGGAAAGGGCTCCCTTAATTaGCAAGCAAAGGAGGCTATGTCCTTGTCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: RDWAGLGKGSLN*QAKEAMSLSLQ
Trigger: CTGCAGGGACAAGGACATAGCCTCCTTTGCTTGCAAATTAAGGGAGCCCTTTCCCAGTCCAGCCCAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp GCTAGGAATAGCGCCATGATCACGACAGTCTCCCCGTaGCTATCATCGACAGACCTCAGACTTGACAGGCAG +
Preference number: 6 (lower is better)
Translates to: ARNSAMITTVSP*LSSTDLRLDRQ
Trigger: CTGCCTGTCAAGTCTGAGGTCTGTCGATGATAGCAACGGGGAGACTGTCGTGATCATGGCGCTATTCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp AAGTTCCGATTGATGCTGTTGCGCCTCCGCTCCTTCTaGTTCAGCAGGATGTTGGAAGCTTCCTCCCGCATC +
Preference number: 6 (lower is better)
Translates to: KFRLMLLRLRSF*FSRMLEASSRI
Trigger: GATGCGGGAGGAAGCTTCCAACATCCTGCTGAACAAGAAGGAGCGGAGGCGCAACAGCATCAATCGGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000597222.2
ENST00000598797.1
ENST00000613525.4
ENST00000644032.2
CDS CCA 72 bp GTCAGCCCTGGCCACCTCTTACTTTGCGTCTTATGGTaGTACGATACTGCTAGGAATAGCGCCATGATCACG +
Preference number: 6 (lower is better)
Translates to: VSPGHLLLCVLW*YDTARNSAMIT
Trigger: CGTGATCATGGCGCTATTCCTAGCAGTATCGTACCACCATAAGACGCAAAGTAAGAGGTGGCCAGGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp GGATCTTCCATGAGGATCTCAATGACCTCGTTCACGTaGAAGCTCAGCTCGTCCACATCTTGGCCCACGTAC +
Preference number: 6 (lower is better)
Translates to: GSSMRISMTSFT*KLSSSTSWPTY
Trigger: GTACGTGGGCCAAGATGTGGACGAGCTGAGCTTCAACGTGAACGAGGTCATTGAGATCCTCATGGAAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS CAA 90 bp TACGATACTGCTAGGAATAGCGCCATGATCACGACAGTCTCCCCGTaGCTATCATCGACAGACCTCAGACTTGACAGGCAGCAACACCTC +
Preference number: 6 (lower is better)
Translates to: YDTARNSAMITTVSP*LSSTDLRLDRQQHL
Trigger: GAGGTGTTGCTGCCTGTCAAGTCTGAGGTCTGTCGATGATAGCAACGGGGAGACTGTCGTGATCATGGCGCTATTCCTAGCAGTATCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CAA 72 bp TTCTTCACTTTCTCTCGCCCAATCACATACACACACTaGGGCGTCAGGATCAAGTCCCGCTTGATGGGCTTG +
Preference number: 6 (lower is better)
Translates to: FFTFSRPITYTH*GVRIKSRLMGL
Trigger: CAAGCCCATCAAGCGGGACTTGATCCTGACGCCCAAGTGTGTGTATGTGATTGGGCGAGAGAAAGTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613525.4
ENST00000644032.2
CDS TCA 72 bp TCTTATGGTGGTACGATACTGCTAGGAATAGCGCCATaGTCACGACAGTCTCCCCGTTGCTATCATCGACAG +
Preference number: 6 (lower is better)
Translates to: SYGGTILLGIAP*SRQSPRCYHRQ
Trigger: CTGTCGATGATAGCAACGGGGAGACTGTCGTGATCATGGCGCTATTCCTAGCAGTATCGTACCACCATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595046.1
CDS CCA 72 bp TGTAGGGTAGGAGGAGAGAAGATGTCAGTGGTTAGCTaGGTTTGGGTTTTGAAGGGCTCTGAATGCCAAACT +
Preference number: 6 (lower is better)
Translates to: CRVGGEKMSVVS*VWVLKGSECQT
Trigger: AGTTTGGCATTCAGAGCCCTTCAAAACCCAAACCCAGCTAACCACTGACATCTTCTCTCCTCCTACCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596245.1